Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7C

Orthogroup ID

OG0005568

Physical Location & Seq

Genomic Coordinates Forward (+)

12397800 .. 12403952

Gene Structure 6153 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7CG151000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1935 bp

ATGGCGGAGACTAAGTACAAGTACCTGATTGAGGTCGAGAAGGGAAAGGCGGCCAAGGACGGCCGGCCGTCCCTCGGTCCCGTTTACCGGAGCCTCTTCGCCAAAGACGGCTTTCCGCAGCCGATTGCCGGAATGGACAGTTGCTGGGATGTTTTCCGCATGTCGGTGGAGAAAAATCCCGGAAACCGAATGCTTGGTCGTCGTGAGACTGTGAATGGGAAGGGTGGTAGATACGTGTGGTTAACTTACAAACAAGTCTATGATGTGGTAGTAAAAGTTGGAAATTCCATGCGCACTCTTGGTTTGGCACAAGCTTGCAATGCTCATGGGCTCTATTGTGTTCCTTTATATGACACTCTAGGTGCTGGTGCTGTGGAATTTATCATATGCCACGCTGAAGTTCCACTTGCTTTTGTAGAAGAAAAAAAGATATCTGAGCTGTTGAAGACATTGCCCAACGCATCAAAATATCTTAAGACACTTGTAAGCTTTGGCAAGGTTACCCCTGAACAAAAGGAATCAGTTGAAAAGCATGGATCTGTGATATATTCATGGAATGAATTTCTGCAACTGGGAGATAAAGACTTTGATCTTCCAGTAAAAAAGAAAAGTGATATCTGTACTATAATGTATACTAGTGGAACAACTGGTGACCCCAAGGGTGTACTGATATCCAATGAAAGCATCATTACTCTACTGGCTGGGGTGAAACGCCTGCTGGAGAGTGTAAATGAAGAGTTGGGCGTGAACGACGTATATCTTTCCTTTCTTCCTCTTGCACATATCTTTGATCGGGTTATCGAGGAGTTATTTATCTGGACTGGTGCCTCGATAGGGTTTTGGCGTGGGGATGTCAAATTGTTAACTGAAGACATTGCGGAGCTAAAACCAACTATTTTTTGTGCTGTTCCTCGCGTTTTAGATAGAATCTACGCAGGCTTGAACCAGAAGATTTCATCAGGCGGCATAATAAAAAAGACATTGTTCAATTTTGCATATTCATACAAGCATTATAACATGCAAAAGGGGCATGCACATGAAGCTGCGTCTCCAATTTCTGATAAGATTGTGTTTAGTAAGGTAAAGGAAGGATTGGGGGGTAGGGTGCGGCTTATTCTGTCTGGAGCTGCTCCTCTTTCTACTCATGTGGAATCTTACTTACGTGTGGTGGCATGCGCTCATGTTTTACAAGGATATGGTCTGACAGAAACTTGTGCTGGGACATTTGTATCGCTACCGAATGAATTGTCAATGCTTGGCACAGTGGGTCCTCCGGTTCCGAATGTAGATGTATGTCTGGAATCTGTTCCTGAAATGGGATACGACGCTCTGTCAGATACACCTCGTGGAGAAGTATGTGTAAGGGGAAAAACTTTGTTTTCAGGATACTACAAACGTGAAGACCTCACCAAAGAGGTCATGATTGATGGGTGGTTCCATACAGGGGATATTGGTGAGTGGCAACAAGATGGAAGTCTTAAAATCATTGATCGCAAGAAGAATATCTTCAAGCTTTCACAAGGAGAATATGTTGCAGTTGAAAACTTGGAGAATATTTATGGACTTGTTTCAGATATTGATGCGATATGGGTTTATGGGAACAGCTTTGAGTCCTGCCTAGTTGCAGTAGTCACTCCCAAAAAGCAAGCAATTGAAAGATGGGCTCAACAAAATGATGTATCTGGTGACTTCAATTCTCTTTGTGAAAATACAAAGGTGAAAGAATACGTGCTTGGAGAGCTGAATAAGATTGCTAAAGAAAAAAAGTTGAAAGGTTTTGAGGTTATAAAAGCTGTTCACCTCGACCCAGAACCGTTCGACATGGAGCGTGACCTTATCACTCCAACATACAAGAAAAAGAGGCCCCAGTTGCTTAAATACTATAAGGGCGTCATTGATAACATGTACAAGAGTGTAAATCAGCCCAAGGCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001676 GO:0003674 GO:0003824 GO:0004467 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005794 GO:0005886 GO:0006082 GO:0006629 GO:0006631 GO:0008150 GO:0008152 GO:0009987 GO:0012505 GO:0015645 GO:0016020 GO:0016405 GO:0016874 GO:0016877 GO:0016878 GO:0019752 GO:0032787 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044255 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0071704 GO:0071944

KEGG Pathways

Metabolic & Signaling

ko00061 ko00071 ko01100 ko01212 ko02024 ko03320 ko04146 ko04216 ko04714 ko04920 map00061 map00071 map01100 map01212 map02024 map03320 map04146 map04216 map04714 map04920

Pfam Domains

Protein Families

AMP-binding

Protein Analysis

644

Amino Acids

71.81

Weight (kDa)

8.05

Isoelectric Point (pI)

32.0

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AMP-binding	PF00501	89 - 464	6.3e-64	AMP-binding enzyme

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005568)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G64400 AT4G11030 AT4G23850
fragaria_vesca	FvH4_5g04520 FvH4_5g04520 FvH4_5g04520
malus_domestica	MD02G1279200.v1.1 MD06G1106100.v1.1 MD14G1128200.v1.1
prunus_persica	Prupe.5G118400_v2.0.a1 Prupe.5G118400_v2.0.a1
pyrus_communis	pycom06g10040
rosa_chinensis	RchiOBHm_Chr7g0179891 RchiOBHm_Chr7g0194931
rosa_laevigata	RLG00000004156
rosa_multiflora	Rmu_sc0008218.1_g000002 Rmu_sc0010214.1_g000001 Rmu_ssc0000157.1_g000004
rosa_roxburghii	Rroxscaffold_3G00260880
rosa_rugosa	Rorug04G0299500 Rorug07G0019100 Rorug07G0019200
rosa_samantha	Rh1DG084200 Rh7AG146900 Rh7BG147600 Rh7CG151000 Rh7DG148100
rosa_wichuraiana	Rw7G012540

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1014, 1787
Acc16I	TGCGCA	1 cut(s)	293
AccB1I	GGYRCC	1 cut(s)	824
AccI	GTMKAC	1 cut(s)	632
AccII	CGCG	1 cut(s)	915
AciI	CCGC	7 cut(s)	5, 50, 116, 157, 878, 963, 1108
AclWI	GGATC	1 cut(s)	544
AcoI	YGGCCR	3 cut(s)	51, 61, 65
AcsI	RAATTY	3 cut(s)	283, 377, 560
AcuI	CTGAAG	2 cut(s)	417, 888
AcyI	GRCGYC	1 cut(s)	1890
AdeI	CACNNNGTG	1 cut(s)	1346
AfaI	GTAC	5 cut(s)	17, 23, 622, 666, 1907
AfiI	CCNNNNNNNGG	8 cut(s)	31, 74, 87, 128, 163, 834, 1316, 1444
AflII	CTTAAG	1 cut(s)	473
AflIII	ACRYGT	3 cut(s)	234, 1162, 1902
AgsI	TTSAA	9 cut(s)	445, 527, 943, 988, 1510, 1541, 1655, 1693, 1771
AhdI	GACNNNNNGTC	1 cut(s)	1330
AhlI	ACTAGT	1 cut(s)	635
AjuI	GAANNNNNNNTTGG	2 cut(s)	1716, 1748
Alw26I	GTCTC	3 cut(s)	2, 200, 1053
AlwI	GGATC	1 cut(s)	544
AlwNI	CAGNNNCTG	1 cut(s)	144
AoxI	GGCC	5 cut(s)	51, 61, 65, 1862, 1929
ApeKI	GCWGC	3 cut(s)	118, 1043, 1127
ApoI	RAATTY	3 cut(s)	283, 377, 560
ArsI	GACNNNNNNTTYG	4 cut(s)	181, 213, 1232, 1264
Asp700I	GAANNNNTTC	2 cut(s)	1305, 1505
AspLEI	GCGC	2 cut(s)	294, 1178
AspS9I	GGNCC	3 cut(s)	77, 1268, 1863
AsuC2I	CCSGG	1 cut(s)	180
AsuHPI	GGTGA	7 cut(s)	662, 718, 1399, 1466, 1697, 1729, 1790
AvaII	GGWCC	2 cut(s)	77, 1268
BaeI	ACNNNNGTAYC	2 cut(s)	1212, 1245
BanI	GGYRCC	1 cut(s)	824
BanII	GRGCYC	2 cut(s)	333, 1666
BauI	CACGAG	1 cut(s)	1344
BbsI	GAAGAC	3 cut(s)	452, 876, 1407
BbvI	GCAGC	3 cut(s)	130, 1030, 1114
BccI	CCATC	3 cut(s)	1421, 1463, 1653
BceAI	ACGGC	3 cut(s)	52, 76, 124
BciVI	GTATCC	2 cut(s)	1313, 1379
BcnI	CCSGG	1 cut(s)	180
BcoDI	GTCTC	3 cut(s)	2, 200, 1053
BcuI	ACTAGT	1 cut(s)	635
BfaI	CTAG	3 cut(s)	359, 636, 1619
BfrI	CTTAAG	1 cut(s)	473
BfuI	GTATCC	2 cut(s)	1313, 1379
BisI	GCNGC	6 cut(s)	51, 119, 964, 1044, 1109, 1128
BlsI	GCNGC	6 cut(s)	52, 120, 965, 1045, 1110, 1129
Bme1390I	CCNGG	1 cut(s)	180
Bme18I	GGWCC	2 cut(s)	77, 1268
BmeRI	GACNNNNNGTC	1 cut(s)	1330
BmgT120I	GGNCC	3 cut(s)	77, 1268, 1863
BmiI	GGNNCC	7 cut(s)	79, 92, 826, 1269, 1278, 1436, 1865
BmrFI	CCNGG	1 cut(s)	180
BmrI	ACTGGG	2 cut(s)	581, 1861
BmsI	GCATC	3 cut(s)	470, 693, 1570
BmuI	ACTGGG	2 cut(s)	581, 1861
BpiI	GAAGAC	3 cut(s)	452, 876, 1407
BpmI	CTGGAG	2 cut(s)	740, 1143
BpuMI	CCSGG	1 cut(s)	180
BsaAI	YACGTR	3 cut(s)	235, 1163, 1729
BsaHI	GRCGYC	1 cut(s)	1890
BsaJI	CCNNGG	4 cut(s)	54, 73, 657, 1926
BsaWI	WCCGGW	2 cut(s)	87, 1273
BsaXI	ACNNNNNCTCC	3 cut(s)	29, 1515, 1545
Bsc4I	CCNNNNNNNGG	8 cut(s)	31, 74, 87, 128, 163, 834, 1316, 1444
Bse118I	RCCGGY	1 cut(s)	63
Bse1I	ACTGG	6 cut(s)	576, 596, 652, 702, 826, 1867
Bse3DI	GCAATG	3 cut(s)	325, 449, 873
BseDI	CCNNGG	4 cut(s)	54, 73, 657, 1926
BseGI	GGATG	2 cut(s)	154, 856
BseLI	CCNNNNNNNGG	8 cut(s)	31, 74, 87, 128, 163, 834, 1316, 1444
BseMI	GCAATG	3 cut(s)	325, 449, 873
BseMII	CTCAG	1 cut(s)	426
BseNI	ACTGG	6 cut(s)	576, 596, 652, 702, 826, 1867
BseRI	GAGGAG	2 cut(s)	818, 1122
BseX3I	CGGCCG	2 cut(s)	61, 65
BseXI	GCAGC	3 cut(s)	130, 1030, 1114
BseYI	CCCAGC	3 cut(s)	144, 701, 1217
Bsh1236I	CGCG	1 cut(s)	915
Bsh1285I	CGRYCG	2 cut(s)	64, 68
BshFI	GGCC	5 cut(s)	53, 63, 67, 1864, 1931
BshNI	GGYRCC	1 cut(s)	824
BsiEI	CGRYCG	2 cut(s)	64, 68
BsiSI	CCGG	5 cut(s)	64, 88, 129, 180, 1274
BslFI	GGGAC	3 cut(s)	55, 63, 1234
BslI	CCNNNNNNNGG	8 cut(s)	31, 74, 87, 128, 163, 834, 1316, 1444
BsmAI	GTCTC	3 cut(s)	2, 200, 1053
BsmBI	CGTCTC	1 cut(s)	1053
BsmFI	GGGAC	3 cut(s)	55, 63, 1234
BsmI	GAATGC	1 cut(s)	195
BsnI	GGCC	5 cut(s)	53, 63, 67, 1864, 1931
Bsp1286I	GDGCHC	2 cut(s)	333, 1666
Bsp1407I	TGTACA	1 cut(s)	1905
Bsp143I	GATC	4 cut(s)	536, 589, 790, 1489
BspACI	CCGC	7 cut(s)	5, 50, 116, 157, 878, 963, 1108
BspANI	GGCC	5 cut(s)	53, 63, 67, 1864, 1931
BspCNI	CTCAG	1 cut(s)	427
BspFNI	CGCG	1 cut(s)	915
BspHI	TCATGA	1 cut(s)	1419
BspLI	GGNNCC	7 cut(s)	79, 92, 826, 1269, 1278, 1436, 1865
BspPI	GGATC	1 cut(s)	544
BspT107I	GGYRCC	1 cut(s)	824
BspTI	CTTAAG	1 cut(s)	473
BsrDI	GCAATG	3 cut(s)	325, 449, 873
BsrFI	RCCGGY	1 cut(s)	63
BsrGI	TGTACA	1 cut(s)	1905
BsrI	ACTGG	6 cut(s)	576, 596, 652, 702, 826, 1867
BssAI	RCCGGY	1 cut(s)	63
BssECI	CCNNGG	4 cut(s)	54, 73, 657, 1926
BssMI	GATC	4 cut(s)	536, 589, 790, 1489
BssNAI	GTATAC	1 cut(s)	633
BssNI	GRCGYC	1 cut(s)	1890
BssSI	CACGAG	1 cut(s)	1344
BssT1I	CCWWGG	3 cut(s)	54, 657, 1926
Bst1107I	GTATAC	1 cut(s)	633
Bst2BI	CACGAG	1 cut(s)	1344
Bst4CI	ACNGT	4 cut(s)	140, 211, 1264, 1815
Bst6I	CTCTTC	2 cut(s)	101, 729
BstACI	GRCGYC	1 cut(s)	1890
BstAFI	CTTAAG	1 cut(s)	473
BstAUI	TGTACA	1 cut(s)	1905
BstBAI	YACGTR	3 cut(s)	235, 1163, 1729
BstC8I	GCNNGC	7 cut(s)	65, 316, 716, 937, 1032, 1174, 1647
BstDEI	CTNAG	2 cut(s)	12, 435
BstEII	GGTNACC	2 cut(s)	499, 650
BstENI	CCTNNNNNAGG	1 cut(s)	29
BstF5I	GGATG	2 cut(s)	154, 856
BstFNI	CGCG	1 cut(s)	915
BstHHI	GCGC	2 cut(s)	294, 1178
BstKTI	GATC	4 cut(s)	539, 592, 793, 1492
BstMAI	GTCTC	3 cut(s)	2, 200, 1053
BstMBI	GATC	4 cut(s)	536, 589, 790, 1489
BstMCI	CGRYCG	2 cut(s)	64, 68
BstMWI	GCNNNNNNNGC	5 cut(s)	320, 1027, 1040, 1738, 1870
BstNSI	RCATGY	5 cut(s)	163, 1021, 1034, 1176, 1906
BstPI	GGTNACC	2 cut(s)	499, 650
BstSCI	CCNGG	1 cut(s)	178
BstUI	CGCG	1 cut(s)	915
BstV1I	GCAGC	3 cut(s)	130, 1030, 1114
BstV2I	GAAGAC	3 cut(s)	452, 876, 1407
BstX2I	RGATCY	1 cut(s)	536
BstYI	RGATCY	1 cut(s)	536
BstZ17I	GTATAC	1 cut(s)	633
BstZI	CGGCCG	2 cut(s)	61, 65
BsuI	GTATCC	2 cut(s)	1313, 1379
BsuRI	GGCC	5 cut(s)	53, 63, 67, 1864, 1931
BtsCI	GGATG	2 cut(s)	154, 856
BtsIMutI	CAGTG	1 cut(s)	1269
Cac8I	GCNNGC	7 cut(s)	65, 316, 716, 937, 1032, 1174, 1647
CaiI	CAGNNNCTG	1 cut(s)	144
CciI	TCATGA	1 cut(s)	1419
CfoI	GCGC	2 cut(s)	294, 1178
Cfr10I	RCCGGY	1 cut(s)	63
Cfr13I	GGNCC	3 cut(s)	77, 1268, 1863
CseI	GACGC	3 cut(s)	1035, 1334, 1879
Csp6I	GTAC	5 cut(s)	16, 22, 621, 665, 1906
CviQI	GTAC	5 cut(s)	16, 22, 621, 665, 1906
DdeI	CTNAG	2 cut(s)	12, 435
DpnI	GATC	4 cut(s)	538, 591, 792, 1491
DpnII	GATC	4 cut(s)	536, 589, 790, 1489
DraIII	CACNNNGTG	1 cut(s)	1346
DriI	GACNNNNNGTC	1 cut(s)	1330
EaeI	YGGCCR	3 cut(s)	51, 61, 65
EagI	CGGCCG	2 cut(s)	61, 65
Eam1104I	CTCTTC	2 cut(s)	101, 729
Eam1105I	GACNNNNNGTC	1 cut(s)	1330
EarI	CTCTTC	2 cut(s)	101, 729
EciI	GGCGGA	1 cut(s)	20
EclXI	CGGCCG	2 cut(s)	61, 65
Eco130I	CCWWGG	3 cut(s)	54, 657, 1926
Eco147I	AGGCCT	1 cut(s)	1931
Eco24I	GRGCYC	2 cut(s)	333, 1666
Eco32I	GATATC	3 cut(s)	432, 616, 672
Eco47I	GGWCC	2 cut(s)	77, 1268
Eco52I	CGGCCG	2 cut(s)	61, 65
Eco57I	CTGAAG	2 cut(s)	417, 888
Eco91I	GGTNACC	2 cut(s)	499, 650
EcoNI	CCTNNNNNAGG	1 cut(s)	29
EcoO109I	RGGNCCY	2 cut(s)	1268, 1863
EcoO65I	GGTNACC	2 cut(s)	499, 650
EcoRV	GATATC	3 cut(s)	432, 616, 672
EcoT14I	CCWWGG	3 cut(s)	54, 657, 1926
EcoT38I	GRGCYC	2 cut(s)	333, 1666
ErhI	CCWWGG	3 cut(s)	54, 657, 1926
Esp3I	CGTCTC	1 cut(s)	1053
FalI	AAGNNNNNCTT	4 cut(s)	390, 422, 1490, 1522
FaqI	GGGAC	3 cut(s)	55, 63, 1234
FauNDI	CATATG	1 cut(s)	386
FblI	GTMKAC	1 cut(s)	632
Fnu4HI	GCNGC	6 cut(s)	51, 119, 964, 1044, 1109, 1128
FokI	GGATG	2 cut(s)	161, 863
FriOI	GRGCYC	2 cut(s)	333, 1666
FseI	GGCCGGCC	1 cut(s)	67
Fsp4HI	GCNGC	6 cut(s)	51, 119, 964, 1044, 1109, 1128
FspAI	RTGCGCAY	1 cut(s)	293
FspBI	CTAG	3 cut(s)	359, 636, 1619
FspI	TGCGCA	1 cut(s)	293
GlaI	GCGC	2 cut(s)	293, 1177
GluI	GCNGC	6 cut(s)	51, 119, 964, 1044, 1109, 1128
GsaI	CCCAGC	3 cut(s)	148, 705, 1221
GsuI	CTGGAG	2 cut(s)	740, 1143
HaeIII	GGCC	5 cut(s)	53, 63, 67, 1864, 1931
HapII	CCGG	5 cut(s)	64, 88, 129, 180, 1274
HgaI	GACGC	3 cut(s)	1035, 1334, 1879
HhaI	GCGC	2 cut(s)	294, 1178
Hin1I	GRCGYC	1 cut(s)	1890
Hin6I	GCGC	2 cut(s)	292, 1176
HinP1I	GCGC	2 cut(s)	292, 1176
HincII	GTYRAC	2 cut(s)	243, 864
HindII	GTYRAC	2 cut(s)	243, 864
HindIII	AAGCTT	3 cut(s)	312, 487, 1511
HinfI	GANTC	5 cut(s)	518, 927, 1151, 1301, 1610
HpaI	GTTAAC	2 cut(s)	243, 864
HpaII	CCGG	5 cut(s)	64, 88, 129, 180, 1274
HphI	GGTGA	7 cut(s)	662, 718, 1399, 1466, 1697, 1729, 1790
Hpy166II	GTNNAC	7 cut(s)	85, 243, 633, 665, 748, 864, 1798
Hpy188I	TCNGA	6 cut(s)	436, 1060, 1203, 1281, 1336, 1573
Hpy188III	TCNNGA	8 cut(s)	37, 203, 817, 1122, 1298, 1310, 1383, 1420
Hpy8I	GTNNAC	7 cut(s)	85, 243, 633, 665, 748, 864, 1798
Hpy99I	CGWCG	3 cut(s)	204, 755, 1328
HpyAV	CCTTC	3 cut(s)	34, 214, 1082
HpyCH4III	ACNGT	4 cut(s)	140, 211, 1264, 1815
HpyCH4IV	ACGT	5 cut(s)	234, 753, 1162, 1396, 1728
HpyCH4V	TGCA	8 cut(s)	318, 568, 779, 995, 1021, 1034, 1535, 1625
HpyF10VI	GCNNNNNNNGC	5 cut(s)	320, 1027, 1040, 1738, 1870
HpyF3I	CTNAG	2 cut(s)	12, 435
HpySE526I	ACGT	5 cut(s)	234, 753, 1162, 1396, 1728
Hsp92I	GRCGYC	1 cut(s)	1890
HspAI	GCGC	2 cut(s)	292, 1176
KroI	GCCGGC	1 cut(s)	63
KroNI	GCCGGC	1 cut(s)	65
KspAI	GTTAAC	2 cut(s)	243, 864
Kzo9I	GATC	4 cut(s)	536, 589, 790, 1489
LmnI	GCTCC	5 cut(s)	90, 880, 1124, 1135, 1825
Lsp1109I	GCAGC	3 cut(s)	130, 1030, 1114
LweI	GCATC	3 cut(s)	470, 693, 1570
MaeI	CTAG	3 cut(s)	359, 636, 1619
MaeII	ACGT	5 cut(s)	234, 753, 1162, 1396, 1728
MaeIII	GTNAC	5 cut(s)	499, 650, 1630, 1685, 1829
MalI	GATC	4 cut(s)	538, 591, 792, 1491
MboI	GATC	4 cut(s)	536, 589, 790, 1489
MfeI	CAATTG	1 cut(s)	1650
MflI	RGATCY	1 cut(s)	536
MhlI	GDGCHC	2 cut(s)	333, 1666
MluCI	AATT	9 cut(s)	283, 377, 560, 857, 988, 1053, 1244, 1650, 1693
MlyI	GAGTC	1 cut(s)	1619
MmeI	TCCRAC	2 cut(s)	259, 1868
MroNI	GCCGGC	1 cut(s)	63
MroXI	GAANNNNTTC	2 cut(s)	1305, 1505
MseI	TTAA	5 cut(s)	242, 474, 863, 1479, 1875
MslI	CAYNNNNRTG	2 cut(s)	164, 1035
MspCI	CTTAAG	1 cut(s)	473
MspI	CCGG	5 cut(s)	64, 88, 129, 180, 1274
MspR9I	CCNGG	1 cut(s)	180
MunI	CAATTG	1 cut(s)	1650
Mva1269I	GAATGC	1 cut(s)	195
MvnI	CGCG	1 cut(s)	915
MwoI	GCNNNNNNNGC	5 cut(s)	320, 1027, 1040, 1738, 1870
NaeI	GCCGGC	1 cut(s)	65
NciI	CCSGG	1 cut(s)	180
NdeI	CATATG	1 cut(s)	386
NdeII	GATC	4 cut(s)	536, 589, 790, 1489
NgoMIV	GCCGGC	1 cut(s)	63
NlaIV	GGNNCC	7 cut(s)	79, 92, 826, 1269, 1278, 1436, 1865
NmuCI	GTSAC	4 cut(s)	650, 1630, 1685, 1829
NsbI	TGCGCA	1 cut(s)	293
NspI	RCATGY	5 cut(s)	163, 1021, 1034, 1176, 1906
PaeI	GCATGC	2 cut(s)	1034, 1176
PagI	TCATGA	1 cut(s)	1419
PceI	AGGCCT	1 cut(s)	1931
PciI	ACATGT	1 cut(s)	1902
PctI	GAATGC	1 cut(s)	195
PdiI	GCCGGC	1 cut(s)	65
PdmI	GAANNNNTTC	2 cut(s)	1305, 1505
PfeI	GAWTC	4 cut(s)	518, 927, 1151, 1301
PfoI	TCCNGGA	1 cut(s)	178
PkrI	GCNGC	6 cut(s)	52, 120, 965, 1045, 1110, 1129
PleI	GAGTC	1 cut(s)	1618
PpsI	GAGTC	1 cut(s)	1618
Ppu21I	YACGTR	3 cut(s)	235, 1163, 1729
PpuMI	RGGWCCY	1 cut(s)	1268
PscI	ACATGT	1 cut(s)	1902
PsiI	TTATAA	2 cut(s)	1014, 1787
Psp5II	RGGWCCY	1 cut(s)	1268
PspEI	GGTNACC	2 cut(s)	499, 650
PspFI	CCCAGC	3 cut(s)	144, 701, 1217
PspN4I	GGNNCC	7 cut(s)	79, 92, 826, 1269, 1278, 1436, 1865
PspPI	GGNCC	3 cut(s)	77, 1268, 1863
PspPPI	RGGWCCY	1 cut(s)	1268
PstNI	CAGNNNCTG	1 cut(s)	144
PsuI	RGATCY	1 cut(s)	536
RigI	GGCCGGCC	1 cut(s)	67
RsaI	GTAC	5 cut(s)	17, 23, 622, 666, 1907
RsaNI	GTAC	5 cut(s)	16, 22, 621, 665, 1906
RseI	CAYNNNNRTG	2 cut(s)	164, 1035
SaqAI	TTAA	5 cut(s)	242, 474, 863, 1479, 1875
SatI	GCNGC	6 cut(s)	51, 119, 964, 1044, 1109, 1128
Sau3AI	GATC	4 cut(s)	536, 589, 790, 1489
Sau96I	GGNCC	3 cut(s)	77, 1268, 1863
SchI	GAGTC	1 cut(s)	1619
ScrFI	CCNGG	1 cut(s)	180
SduI	GDGCHC	2 cut(s)	333, 1666
SfaNI	GCATC	3 cut(s)	470, 693, 1570
SinI	GGWCC	2 cut(s)	77, 1268
SmiMI	CAYNNNNRTG	2 cut(s)	164, 1035
SmlI	CTYRAG	1 cut(s)	473
SmoI	CTYRAG	1 cut(s)	473
SpeI	ACTAGT	1 cut(s)	635
SphI	GCATGC	2 cut(s)	1034, 1176
Sse9I	AATT	9 cut(s)	283, 377, 560, 857, 988, 1053, 1244, 1650, 1693
SseBI	AGGCCT	1 cut(s)	1931
SsiI	CCGC	7 cut(s)	5, 50, 116, 157, 878, 963, 1108
SspI	AATATT	1 cut(s)	1555
SspMI	CTAG	3 cut(s)	359, 636, 1619
StuI	AGGCCT	1 cut(s)	1931
StyD4I	CCNGG	1 cut(s)	178
StyI	CCWWGG	3 cut(s)	54, 657, 1926
TaaI	ACNGT	4 cut(s)	140, 211, 1264, 1815
TaiI	ACGT	5 cut(s)	237, 756, 1165, 1399, 1731
TaqI	TCGA	5 cut(s)	36, 801, 830, 1803, 1818
TaqII	GACCGA	1 cut(s)	65
TasI	AATT	9 cut(s)	283, 377, 560, 857, 988, 1053, 1244, 1650, 1693
TatI	WGTACW	4 cut(s)	15, 620, 664, 1905
TauI	GCSGC	3 cut(s)	53, 966, 1111
TfiI	GAWTC	4 cut(s)	518, 927, 1151, 1301
Tru1I	TTAA	5 cut(s)	242, 474, 863, 1479, 1875
Tru9I	TTAA	5 cut(s)	242, 474, 863, 1479, 1875
TscAI	CASTG	1 cut(s)	1269
TseFI	GTSAC	4 cut(s)	650, 1630, 1685, 1829
TseI	GCWGC	3 cut(s)	118, 1043, 1127
Tsp45I	GTSAC	4 cut(s)	650, 1630, 1685, 1829
TspDTI	ATGAA	8 cut(s)	540, 573, 693, 747, 945, 990, 1053, 1257
TspRI	CASTG	1 cut(s)	1269
Vha464I	CTTAAG	1 cut(s)	473
VpaK11BI	GGWCC	2 cut(s)	77, 1268
XagI	CCTNNNNNAGG	1 cut(s)	29
XapI	RAATTY	3 cut(s)	283, 377, 560
XceI	RCATGY	5 cut(s)	163, 1021, 1034, 1176, 1906
XmiI	GTMKAC	1 cut(s)	632
XmnI	GAANNNNTTC	2 cut(s)	1305, 1505
XspI	CTAG	3 cut(s)	359, 636, 1619

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.