Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000157.1

Orthogroup ID

OG0005568

Physical Location & Seq

Genomic Coordinates Reverse (-)

14960 .. 23276

Gene Structure 8317 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_ssc0000157.1_g000004.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2307 bp

atggcggagactaagtacaagtacctgattgaggtcgagaagggaaaggcggccaaggacggccggccgtccctcggtcccgtttaccggagcctcttcgccaaagacggctttccgcagccgattgccggaatggacagttgctgggatgttttccgcatgtcggtggagaaaaatcccggaaaccgaatgcttggtcgtcgtgagactgtgaatgggcagggtcgtagatacgtgtggttaacttacaaacaagtctatgatgtggtagtaaaagttggaaattccatgcgcactcttggtttggcacaaggagacaaatgtggtatatttggtgccaattgcccagaatggattatgagcatggaggcttgcaatgctcatgggctctattgtgttcctttatatgacactctaggtgctggtgctgtggaatttatcatatgccatgctgaagttccacttgcttttgtagaagaaaaaaagatatctgagctgttgaagacattgcccaacgcatcaaaatatcttaagacacttgtaagctttggcaaggttacccctgaacaaaaggaatcagttgaaaagcatggatctgtgatatattcatggaatgaatttctgcaactgggagataaagactttgatcttccagtaaaaaagaaaagtgatatctgtactataatgtatactagtggaacaactggtgaccccaagggtgtactgatatccaatgaaagcatcattactctactggctggggtgaaacgcctgctggagagtgtaaatgaagagttgggcgtgaacgacgtatatctttcctttcttcctcttgcacatatctttgatcgggttatcgaggagttatttatctggactggtgcctcgatagggttttggcgtggggatgtcaaattgttaactgaagacattgcggagctaaaaccaactattttttgtgctgttcctcgcgttttagatagaatctacgcaggcttgaaccagaagatttcatcaggcggcataataaaaaagacattgttcaattttgcatattcatacaagcattataacatgcaaaaggggcatgcacatggagctgcgtctccaatttctgataagattgtgtttagtaaggtaaaggaaggattggggggtagggtgcggcttattctgtctggagctgctcctctttctactcatgtggaatcttacttacgtgtggtggcatgcgctcatgttttacaaggatatggtctgacagaaacttgtgctgggacatttgtatcgctaccaaatgaattgtcaatgcttggcacagtgggtcctccggttccaaatgtagatgtatgtctggaatctgttcctgaaatggggtacgacgctctgtcagatacacctcgtggagaagtttgtgtaaggggaaaaactttgttttcaggatactacaaacgtgaagacctcaccaaagaggtcatgattgatgggtggttccatacaggggatattggtgagtggcaacaagatggaagtcttaaaatcattgatcgcaagaagaatatcttcaagctttcacaaggagaatatgttgcagttgaaaacttggagaatatttatggacttgtttcagatattgatgcgatatgggtttatgggaacagctttgagtcctgcctagttgcagtagtcactcccaacaagcaagcaattgaaagatgggctcaacaaaatgatgtatctggggatattggtgagtggcaacaagatggaagtcttaaaatcattgatcgcaagaagaatatcttcaagctttcacaaggagaatatgttgcagttgaaaacttggagaatatttatggacttgtttcagatattgatgcgatatgggtttatgggaacagctttgagtcctgcctagttgcagtagtcactcccaacactcttatccttttcagttgcttaaatactataaggcctgcatgggttgctagagcaggggaacacccctctcctgatcgtgtaggggaatcggtggtggggctaccgatgctgtggtttctcattgcgaattcccaaaatttttggtggaaagctgccggtgtctcggtggtttggatggttcggcctcgacaactcctggcggcgtcatgcgttgggattggtggccgagcggtgattgatggcggttgcttggtgcctggattgagcgaatcggtgcggggggtagctggggacgccaaagctaaggtgatcaatggtgaggctacagctgatgcggcgaccgtggttggttggcaaatctggtga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001676 GO:0003674 GO:0003824 GO:0004467 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005794 GO:0005886 GO:0006082 GO:0006629 GO:0006631 GO:0008150 GO:0008152 GO:0009987 GO:0012505 GO:0015645 GO:0016020 GO:0016405 GO:0016874 GO:0016877 GO:0016878 GO:0019752 GO:0032787 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044255 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0071704 GO:0071944

KEGG Pathways

Metabolic & Signaling

ko00061 ko00071 ko01100 ko01212 ko02024 ko03320 ko04146 ko04216 ko04714 ko04920 map00061 map00071 map01100 map01212 map02024 map03320 map04146 map04216 map04714 map04920

Pfam Domains

Protein Families

AMP-binding

Protein Analysis

768

Amino Acids

84.46

Weight (kDa)

6.0

Isoelectric Point (pI)

32.94

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005568)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G64400 AT4G11030 AT4G23850
fragaria_vesca	FvH4_5g04520 FvH4_5g04520 FvH4_5g04520
malus_domestica	MD02G1279200.v1.1 MD06G1106100.v1.1 MD14G1128200.v1.1
prunus_persica	Prupe.5G118400_v2.0.a1 Prupe.5G118400_v2.0.a1
pyrus_communis	pycom06g10040
rosa_chinensis	RchiOBHm_Chr7g0179891 RchiOBHm_Chr7g0194931
rosa_laevigata	RLG00000004156
rosa_multiflora	Rmu_sc0008218.1_g000002 Rmu_sc0010214.1_g000001 Rmu_ssc0000157.1_g000004
rosa_roxburghii	Rroxscaffold_3G00260880
rosa_rugosa	Rorug04G0299500 Rorug07G0019100 Rorug07G0019200
rosa_samantha	Rh1DG084200 Rh7AG146900 Rh7BG147600 Rh7CG151000 Rh7DG148100
rosa_wichuraiana	Rw7G012540

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1071
Acc16I	TGCGCA	1 cut(s)	293
AccB1I	GGYRCC	3 cut(s)	335, 881, 2194
AccBSI	CCGCTC	1 cut(s)	2171
AccI	GTMKAC	1 cut(s)	689
AccII	CGCG	1 cut(s)	972
AclWI	GGATC	1 cut(s)	601
AcoI	YGGCCR	4 cut(s)	51, 61, 65, 2164
AcsI	RAATTY	5 cut(s)	283, 434, 617, 2068, 2077
AcuI	CTGAAG	2 cut(s)	474, 945
AcyI	GRCGYC	2 cut(s)	2144, 2235
AdeI	CACNNNGTG	1 cut(s)	1403
AfaI	GTAC	5 cut(s)	17, 23, 679, 723, 1379
AfiI	CCNNNNNNNGG	8 cut(s)	31, 74, 87, 128, 163, 891, 1373, 1501
AflII	CTTAAG	1 cut(s)	530
AflIII	ACRYGT	2 cut(s)	234, 1219
AgsI	TTSAA	9 cut(s)	502, 584, 1000, 1045, 1567, 1598, 1712, 1807, 1838
AhdI	GACNNNNNGTC	1 cut(s)	1387
AhlI	ACTAGT	1 cut(s)	692
AjnI	CCWGG	2 cut(s)	2136, 2197
Alw26I	GTCTC	5 cut(s)	2, 200, 309, 1110, 2107
AlwI	GGATC	1 cut(s)	601
AlwNI	CAGNNNCTG	1 cut(s)	144
AoxI	GGCC	6 cut(s)	51, 61, 65, 1973, 2123, 2164
ApeKI	GCWGC	4 cut(s)	118, 1100, 1184, 2093
ApoI	RAATTY	5 cut(s)	283, 434, 617, 2068, 2077
ArsI	GACNNNNNNTTYG	4 cut(s)	181, 213, 1289, 1321
Asp700I	GAANNNNTTC	3 cut(s)	1362, 1562, 1802
AspLEI	GCGC	2 cut(s)	294, 1235
AspS9I	GGNCC	2 cut(s)	77, 1325
AsuC2I	CCSGG	1 cut(s)	180
AsuHPI	GGTGA	8 cut(s)	719, 775, 1456, 1523, 1763, 2185, 2260, 2270
AvaII	GGWCC	2 cut(s)	77, 1325
BaeI	ACNNNNGTAYC	2 cut(s)	1269, 1302
BanI	GGYRCC	3 cut(s)	335, 881, 2194
BanII	GRGCYC	2 cut(s)	390, 1723
BauI	CACGAG	1 cut(s)	1401
BbsI	GAAGAC	3 cut(s)	509, 933, 1464
BbvI	GCAGC	4 cut(s)	130, 1087, 1171, 2080
BccI	CCATC	6 cut(s)	1478, 1520, 1710, 1760, 2110, 2174
BceAI	ACGGC	3 cut(s)	52, 76, 124
BciT130I	CCWGG	2 cut(s)	2138, 2199
BciVI	GTATCC	1 cut(s)	1436
BclI	TGATCA	1 cut(s)	2250
BcnI	CCSGG	1 cut(s)	180
BcoDI	GTCTC	5 cut(s)	2, 200, 309, 1110, 2107
BcuI	ACTAGT	1 cut(s)	692
BfaI	CTAG	5 cut(s)	416, 693, 1676, 1916, 1989
BfmI	CTRYAG	1 cut(s)	2265
BfrI	CTTAAG	1 cut(s)	530
BfuI	GTATCC	1 cut(s)	1436
BisI	GCNGC	9 cut(s)	51, 119, 1021, 1101, 1166, 1185, 2094, 2142, 2277
BlsI	GCNGC	9 cut(s)	52, 120, 1022, 1102, 1167, 1186, 2095, 2143, 2278
Bme1390I	CCNGG	3 cut(s)	180, 2138, 2199
Bme18I	GGWCC	2 cut(s)	77, 1325
BmeRI	GACNNNNNGTC	1 cut(s)	1387
BmgT120I	GGNCC	2 cut(s)	77, 1325
BmiI	GGNNCC	8 cut(s)	79, 92, 337, 883, 1326, 1335, 1493, 2196
BmrFI	CCNGG	3 cut(s)	180, 2138, 2199
BmrI	ACTGGG	1 cut(s)	638
BmsI	GCATC	6 cut(s)	527, 750, 1627, 1867, 2037, 2263
BmuI	ACTGGG	1 cut(s)	638
BpiI	GAAGAC	3 cut(s)	509, 933, 1464
BpmI	CTGGAG	2 cut(s)	797, 1200
Bpu10I	CCTNAGC	1 cut(s)	2244
BpuMI	CCSGG	1 cut(s)	180
BsaAI	YACGTR	2 cut(s)	235, 1220
BsaHI	GRCGYC	2 cut(s)	2144, 2235
BsaJI	CCNNGG	4 cut(s)	54, 73, 714, 2283
BsaWI	WCCGGW	2 cut(s)	87, 1330
BsaXI	ACNNNNNCTCC	5 cut(s)	29, 1572, 1602, 1812, 1842
Bsc4I	CCNNNNNNNGG	8 cut(s)	31, 74, 87, 128, 163, 891, 1373, 1501
Bse118I	RCCGGY	2 cut(s)	63, 2096
Bse1I	ACTGG	5 cut(s)	633, 653, 709, 759, 883
Bse3DI	GCAATG	4 cut(s)	382, 506, 930, 2061
BseBI	CCWGG	2 cut(s)	2138, 2199
BseDI	CCNNGG	4 cut(s)	54, 73, 714, 2283
BseGI	GGATG	3 cut(s)	154, 913, 2121
BseLI	CCNNNNNNNGG	8 cut(s)	31, 74, 87, 128, 163, 891, 1373, 1501
BseMI	GCAATG	4 cut(s)	382, 506, 930, 2061
BseMII	CTCAG	1 cut(s)	483
BseNI	ACTGG	5 cut(s)	633, 653, 709, 759, 883
BseRI	GAGGAG	2 cut(s)	875, 1179
BseX3I	CGGCCG	2 cut(s)	61, 65
BseXI	GCAGC	4 cut(s)	130, 1087, 1171, 2080
BseYI	CCCAGC	4 cut(s)	144, 758, 1274, 2228
Bsh1236I	CGCG	1 cut(s)	972
Bsh1285I	CGRYCG	3 cut(s)	64, 68, 2283
BshFI	GGCC	6 cut(s)	53, 63, 67, 1975, 2125, 2166
BshNI	GGYRCC	3 cut(s)	335, 881, 2194
BsiEI	CGRYCG	3 cut(s)	64, 68, 2283
BsiSI	CCGG	6 cut(s)	64, 88, 129, 180, 1331, 2097
BslFI	GGGAC	4 cut(s)	55, 63, 1291, 2246
BslI	CCNNNNNNNGG	8 cut(s)	31, 74, 87, 128, 163, 891, 1373, 1501
BsmAI	GTCTC	5 cut(s)	2, 200, 309, 1110, 2107
BsmBI	CGTCTC	1 cut(s)	1110
BsmFI	GGGAC	4 cut(s)	55, 63, 1291, 2246
BsmI	GAATGC	1 cut(s)	195
BsnI	GGCC	6 cut(s)	53, 63, 67, 1975, 2125, 2166
Bsp1286I	GDGCHC	2 cut(s)	390, 1723
Bsp143I	GATC	7 cut(s)	593, 646, 847, 1546, 1786, 2014, 2250
BspANI	GGCC	6 cut(s)	53, 63, 67, 1975, 2125, 2166
BspCNI	CTCAG	1 cut(s)	484
BspFNI	CGCG	1 cut(s)	972
BspHI	TCATGA	1 cut(s)	1476
BspLI	GGNNCC	8 cut(s)	79, 92, 337, 883, 1326, 1335, 1493, 2196
BspPI	GGATC	1 cut(s)	601
BspT107I	GGYRCC	3 cut(s)	335, 881, 2194
BspTI	CTTAAG	1 cut(s)	530
BsrBI	CCGCTC	1 cut(s)	2171
BsrDI	GCAATG	4 cut(s)	382, 506, 930, 2061
BsrFI	RCCGGY	2 cut(s)	63, 2096
BsrI	ACTGG	5 cut(s)	633, 653, 709, 759, 883
BssAI	RCCGGY	2 cut(s)	63, 2096
BssECI	CCNNGG	4 cut(s)	54, 73, 714, 2283
BssMI	GATC	7 cut(s)	593, 646, 847, 1546, 1786, 2014, 2250
BssNAI	GTATAC	1 cut(s)	690
BssNI	GRCGYC	2 cut(s)	2144, 2235
BssSI	CACGAG	1 cut(s)	1401
BssT1I	CCWWGG	2 cut(s)	54, 714
Bst1107I	GTATAC	1 cut(s)	690
Bst2BI	CACGAG	1 cut(s)	1401
Bst2UI	CCWGG	2 cut(s)	2138, 2199
Bst4CI	ACNGT	4 cut(s)	140, 211, 1321, 2284
Bst6I	CTCTTC	2 cut(s)	101, 786
BstACI	GRCGYC	2 cut(s)	2144, 2235
BstAFI	CTTAAG	1 cut(s)	530
BstAPI	GCANNNNNTGC	1 cut(s)	1985
BstBAI	YACGTR	2 cut(s)	235, 1220
BstC8I	GCNNGC	8 cut(s)	65, 373, 773, 994, 1089, 1231, 1704, 1977
BstDEI	CTNAG	3 cut(s)	12, 492, 2244
BstDSI	CCRYGG	1 cut(s)	2283
BstEII	GGTNACC	2 cut(s)	556, 707
BstENI	CCTNNNNNAGG	1 cut(s)	29
BstF5I	GGATG	3 cut(s)	154, 913, 2121
BstFNI	CGCG	1 cut(s)	972
BstHHI	GCGC	2 cut(s)	294, 1235
BstKTI	GATC	7 cut(s)	596, 649, 850, 1549, 1789, 2017, 2253
BstMAI	GTCTC	5 cut(s)	2, 200, 309, 1110, 2107
BstMBI	GATC	7 cut(s)	593, 646, 847, 1546, 1786, 2014, 2250
BstMCI	CGRYCG	3 cut(s)	64, 68, 2283
BstMWI	GCNNNNNNNGC	7 cut(s)	377, 1084, 1097, 1985, 2047, 2234, 2276
BstNI	CCWGG	2 cut(s)	2138, 2199
BstNSI	RCATGY	4 cut(s)	163, 1078, 1091, 1233
BstPI	GGTNACC	2 cut(s)	556, 707
BstSCI	CCNGG	3 cut(s)	178, 2136, 2197
BstSFI	CTRYAG	1 cut(s)	2265
BstUI	CGCG	1 cut(s)	972
BstV1I	GCAGC	4 cut(s)	130, 1087, 1171, 2080
BstV2I	GAAGAC	3 cut(s)	509, 933, 1464
BstX2I	RGATCY	1 cut(s)	593
BstYI	RGATCY	1 cut(s)	593
BstZ17I	GTATAC	1 cut(s)	690
BstZI	CGGCCG	2 cut(s)	61, 65
BsuI	GTATCC	1 cut(s)	1436
BsuRI	GGCC	6 cut(s)	53, 63, 67, 1975, 2125, 2166
BtgI	CCRYGG	1 cut(s)	2283
BtsCI	GGATG	3 cut(s)	154, 913, 2121
BtsIMutI	CAGTG	1 cut(s)	1326
Cac8I	GCNNGC	8 cut(s)	65, 373, 773, 994, 1089, 1231, 1704, 1977
CaiI	CAGNNNCTG	1 cut(s)	144
CciI	TCATGA	1 cut(s)	1476
CfoI	GCGC	2 cut(s)	294, 1235
Cfr10I	RCCGGY	2 cut(s)	63, 2096
Cfr13I	GGNCC	2 cut(s)	77, 1325
CseI	GACGC	4 cut(s)	1092, 1391, 2133, 2243
Csp6I	GTAC	5 cut(s)	16, 22, 678, 722, 1378
CviQI	GTAC	5 cut(s)	16, 22, 678, 722, 1378
DdeI	CTNAG	3 cut(s)	12, 492, 2244
DpnI	GATC	7 cut(s)	595, 648, 849, 1548, 1788, 2016, 2252
DpnII	GATC	7 cut(s)	593, 646, 847, 1546, 1786, 2014, 2250
DraIII	CACNNNGTG	1 cut(s)	1403
DriI	GACNNNNNGTC	1 cut(s)	1387
EaeI	YGGCCR	4 cut(s)	51, 61, 65, 2164
EagI	CGGCCG	2 cut(s)	61, 65
Eam1104I	CTCTTC	2 cut(s)	101, 786
Eam1105I	GACNNNNNGTC	1 cut(s)	1387
EarI	CTCTTC	2 cut(s)	101, 786
EciI	GGCGGA	1 cut(s)	20
EclXI	CGGCCG	2 cut(s)	61, 65
Eco130I	CCWWGG	2 cut(s)	54, 714
Eco147I	AGGCCT	1 cut(s)	1975
Eco24I	GRGCYC	2 cut(s)	390, 1723
Eco32I	GATATC	3 cut(s)	489, 673, 729
Eco47I	GGWCC	2 cut(s)	77, 1325
Eco52I	CGGCCG	2 cut(s)	61, 65
Eco57I	CTGAAG	2 cut(s)	474, 945
Eco91I	GGTNACC	2 cut(s)	556, 707
EcoNI	CCTNNNNNAGG	1 cut(s)	29
EcoO109I	RGGNCCY	1 cut(s)	1325
EcoO65I	GGTNACC	2 cut(s)	556, 707
EcoRI	GAATTC	1 cut(s)	2068
EcoRII	CCWGG	2 cut(s)	2136, 2197
EcoRV	GATATC	3 cut(s)	489, 673, 729
EcoT14I	CCWWGG	2 cut(s)	54, 714
EcoT38I	GRGCYC	2 cut(s)	390, 1723
ErhI	CCWWGG	2 cut(s)	54, 714
Esp3I	CGTCTC	1 cut(s)	1110
FalI	AAGNNNNNCTT	6 cut(s)	447, 479, 1547, 1579, 1787, 1819
FaqI	GGGAC	4 cut(s)	55, 63, 1291, 2246
FauI	CCCGC	1 cut(s)	2211
FauNDI	CATATG	1 cut(s)	443
FbaI	TGATCA	1 cut(s)	2250
FblI	GTMKAC	1 cut(s)	689
Fnu4HI	GCNGC	9 cut(s)	51, 119, 1021, 1101, 1166, 1185, 2094, 2142, 2277
FokI	GGATG	3 cut(s)	161, 920, 2128
FriOI	GRGCYC	2 cut(s)	390, 1723
FseI	GGCCGGCC	1 cut(s)	67
Fsp4HI	GCNGC	9 cut(s)	51, 119, 1021, 1101, 1166, 1185, 2094, 2142, 2277
FspAI	RTGCGCAY	1 cut(s)	293
FspBI	CTAG	5 cut(s)	416, 693, 1676, 1916, 1989
FspI	TGCGCA	1 cut(s)	293
GlaI	GCGC	2 cut(s)	293, 1234
GluI	GCNGC	9 cut(s)	51, 119, 1021, 1101, 1166, 1185, 2094, 2142, 2277
GsaI	CCCAGC	4 cut(s)	148, 762, 1278, 2232
GsuI	CTGGAG	2 cut(s)	797, 1200
HaeIII	GGCC	6 cut(s)	53, 63, 67, 1975, 2125, 2166
HapII	CCGG	6 cut(s)	64, 88, 129, 180, 1331, 2097
HgaI	GACGC	4 cut(s)	1092, 1391, 2133, 2243
HhaI	GCGC	2 cut(s)	294, 1235
Hin1I	GRCGYC	2 cut(s)	2144, 2235
Hin6I	GCGC	2 cut(s)	292, 1233
HinP1I	GCGC	2 cut(s)	292, 1233
HincII	GTYRAC	2 cut(s)	243, 921
HindII	GTYRAC	2 cut(s)	243, 921
HindIII	AAGCTT	3 cut(s)	544, 1568, 1808
HinfI	GANTC	8 cut(s)	575, 984, 1208, 1358, 1667, 1907, 2027, 2210
HpaI	GTTAAC	2 cut(s)	243, 921
HpaII	CCGG	6 cut(s)	64, 88, 129, 180, 1331, 2097
HphI	GGTGA	8 cut(s)	719, 775, 1456, 1523, 1763, 2185, 2260, 2270
Hpy166II	GTNNAC	6 cut(s)	85, 243, 690, 722, 805, 921
Hpy188I	TCNGA	6 cut(s)	493, 1117, 1260, 1393, 1630, 1870
Hpy188III	TCNNGA	9 cut(s)	37, 203, 874, 1179, 1355, 1367, 1440, 1477, 2012
Hpy8I	GTNNAC	6 cut(s)	85, 243, 690, 722, 805, 921
Hpy99I	CGWCG	3 cut(s)	204, 812, 1385
HpyAV	CCTTC	2 cut(s)	34, 1139
HpyCH4III	ACNGT	4 cut(s)	140, 211, 1321, 2284
HpyCH4IV	ACGT	4 cut(s)	234, 810, 1219, 1453
HpyF10VI	GCNNNNNNNGC	7 cut(s)	377, 1084, 1097, 1985, 2047, 2234, 2276
HpyF3I	CTNAG	3 cut(s)	12, 492, 2244
HpySE526I	ACGT	4 cut(s)	234, 810, 1219, 1453
Hsp92I	GRCGYC	2 cut(s)	2144, 2235
HspAI	GCGC	2 cut(s)	292, 1233
KroI	GCCGGC	1 cut(s)	63
KroNI	GCCGGC	1 cut(s)	65
Ksp22I	TGATCA	1 cut(s)	2250
KspAI	GTTAAC	2 cut(s)	243, 921
Kzo9I	GATC	7 cut(s)	593, 646, 847, 1546, 1786, 2014, 2250
LmnI	GCTCC	5 cut(s)	90, 937, 1097, 1181, 1192
Lsp1109I	GCAGC	4 cut(s)	130, 1087, 1171, 2080
LweI	GCATC	6 cut(s)	527, 750, 1627, 1867, 2037, 2263
MaeI	CTAG	5 cut(s)	416, 693, 1676, 1916, 1989
MaeII	ACGT	4 cut(s)	234, 810, 1219, 1453
MaeIII	GTNAC	4 cut(s)	556, 707, 1687, 1927
MalI	GATC	7 cut(s)	595, 648, 849, 1548, 1788, 2016, 2252
MbiI	CCGCTC	1 cut(s)	2171
MboI	GATC	7 cut(s)	593, 646, 847, 1546, 1786, 2014, 2250
MfeI	CAATTG	2 cut(s)	340, 1707
MflI	RGATCY	1 cut(s)	593
MhlI	GDGCHC	2 cut(s)	390, 1723
MlyI	GAGTC	2 cut(s)	1676, 1916
MmeI	TCCRAC	1 cut(s)	259
MroNI	GCCGGC	1 cut(s)	63
MroXI	GAANNNNTTC	3 cut(s)	1362, 1562, 1802
MseI	TTAA	6 cut(s)	242, 531, 920, 1536, 1776, 1961
MslI	CAYNNNNRTG	2 cut(s)	164, 1092
MspA1I	CMGCKG	1 cut(s)	2270
MspCI	CTTAAG	1 cut(s)	530
MspI	CCGG	6 cut(s)	64, 88, 129, 180, 1331, 2097
MspR9I	CCNGG	3 cut(s)	180, 2138, 2199
MunI	CAATTG	2 cut(s)	340, 1707
Mva1269I	GAATGC	1 cut(s)	195
MvaI	CCWGG	2 cut(s)	2138, 2199
MvnI	CGCG	1 cut(s)	972
MwoI	GCNNNNNNNGC	7 cut(s)	377, 1084, 1097, 1985, 2047, 2234, 2276
NaeI	GCCGGC	1 cut(s)	65
NciI	CCSGG	1 cut(s)	180
NdeI	CATATG	1 cut(s)	443
NdeII	GATC	7 cut(s)	593, 646, 847, 1546, 1786, 2014, 2250
NgoMIV	GCCGGC	1 cut(s)	63
NlaIV	GGNNCC	8 cut(s)	79, 92, 337, 883, 1326, 1335, 1493, 2196
NmeAIII	GCCGAG	1 cut(s)	2192
NmuCI	GTSAC	3 cut(s)	707, 1687, 1927
NsbI	TGCGCA	1 cut(s)	293
NspI	RCATGY	4 cut(s)	163, 1078, 1091, 1233
PaeI	GCATGC	2 cut(s)	1091, 1233
PagI	TCATGA	1 cut(s)	1476
PceI	AGGCCT	1 cut(s)	1975
PctI	GAATGC	1 cut(s)	195
PdiI	GCCGGC	1 cut(s)	65
PdmI	GAANNNNTTC	3 cut(s)	1362, 1562, 1802
PfeI	GAWTC	6 cut(s)	575, 984, 1208, 1358, 2027, 2210
PfoI	TCCNGGA	1 cut(s)	178
PkrI	GCNGC	9 cut(s)	52, 120, 1022, 1102, 1167, 1186, 2095, 2143, 2278
PleI	GAGTC	2 cut(s)	1675, 1915
PpsI	GAGTC	2 cut(s)	1675, 1915
Ppu21I	YACGTR	2 cut(s)	235, 1220
PpuMI	RGGWCCY	1 cut(s)	1325
PsiI	TTATAA	1 cut(s)	1071
Psp5II	RGGWCCY	1 cut(s)	1325
Psp6I	CCWGG	2 cut(s)	2136, 2197
PspEI	GGTNACC	2 cut(s)	556, 707
PspFI	CCCAGC	4 cut(s)	144, 758, 1274, 2228
PspGI	CCWGG	2 cut(s)	2136, 2197
PspN4I	GGNNCC	8 cut(s)	79, 92, 337, 883, 1326, 1335, 1493, 2196
PspPI	GGNCC	2 cut(s)	77, 1325
PspPPI	RGGWCCY	1 cut(s)	1325
PstNI	CAGNNNCTG	1 cut(s)	144
PsuI	RGATCY	1 cut(s)	593
PvuII	CAGCTG	1 cut(s)	2270
RigI	GGCCGGCC	1 cut(s)	67
RsaI	GTAC	5 cut(s)	17, 23, 679, 723, 1379
RsaNI	GTAC	5 cut(s)	16, 22, 678, 722, 1378
RseI	CAYNNNNRTG	2 cut(s)	164, 1092
SaqAI	TTAA	6 cut(s)	242, 531, 920, 1536, 1776, 1961
SatI	GCNGC	9 cut(s)	51, 119, 1021, 1101, 1166, 1185, 2094, 2142, 2277
Sau3AI	GATC	7 cut(s)	593, 646, 847, 1546, 1786, 2014, 2250
Sau96I	GGNCC	2 cut(s)	77, 1325
SchI	GAGTC	2 cut(s)	1676, 1916
ScrFI	CCNGG	3 cut(s)	180, 2138, 2199
SduI	GDGCHC	2 cut(s)	390, 1723
SfaNI	GCATC	6 cut(s)	527, 750, 1627, 1867, 2037, 2263
SfcI	CTRYAG	1 cut(s)	2265
SinI	GGWCC	2 cut(s)	77, 1325
SmiMI	CAYNNNNRTG	2 cut(s)	164, 1092
SmlI	CTYRAG	1 cut(s)	530
SmoI	CTYRAG	1 cut(s)	530
SpeI	ACTAGT	1 cut(s)	692
SphI	GCATGC	2 cut(s)	1091, 1233
SseBI	AGGCCT	1 cut(s)	1975
SspI	AATATT	2 cut(s)	1612, 1852
SspMI	CTAG	5 cut(s)	416, 693, 1676, 1916, 1989
StuI	AGGCCT	1 cut(s)	1975
StyD4I	CCNGG	3 cut(s)	178, 2136, 2197
StyI	CCWWGG	2 cut(s)	54, 714
TaaI	ACNGT	4 cut(s)	140, 211, 1321, 2284
TaiI	ACGT	4 cut(s)	237, 813, 1222, 1456
TaqI	TCGA	4 cut(s)	36, 858, 887, 2128
TaqII	GACCGA	1 cut(s)	65
TatI	WGTACW	3 cut(s)	15, 677, 721
TauI	GCSGC	5 cut(s)	53, 1023, 1168, 2144, 2279
TfiI	GAWTC	6 cut(s)	575, 984, 1208, 1358, 2027, 2210
Tru1I	TTAA	6 cut(s)	242, 531, 920, 1536, 1776, 1961
Tru9I	TTAA	6 cut(s)	242, 531, 920, 1536, 1776, 1961
TscAI	CASTG	1 cut(s)	1326
TseFI	GTSAC	3 cut(s)	707, 1687, 1927
TseI	GCWGC	4 cut(s)	118, 1100, 1184, 2093
Tsp45I	GTSAC	3 cut(s)	707, 1687, 1927
TspDTI	ATGAA	7 cut(s)	597, 630, 750, 804, 1002, 1047, 1314
TspRI	CASTG	1 cut(s)	1326
Vha464I	CTTAAG	1 cut(s)	530
VpaK11BI	GGWCC	2 cut(s)	77, 1325
XagI	CCTNNNNNAGG	1 cut(s)	29
XapI	RAATTY	5 cut(s)	283, 434, 617, 2068, 2077
XceI	RCATGY	4 cut(s)	163, 1078, 1091, 1233
XmiI	GTMKAC	1 cut(s)	689
XmnI	GAANNNNTTC	3 cut(s)	1362, 1562, 1802
XspI	CTAG	5 cut(s)	416, 693, 1676, 1916, 1989

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.