Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0013570

Physical Location & Seq

Genomic Coordinates Reverse (-)

3762766 .. 3766930

Gene Structure 4165 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g06430.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2202 bp

ATGGACTCTACTGCAACCACCACCATGAGTCTAAGAGCCACCTCATCATCTTCTTCCTCCTCCTCCTCTTCCTTCTTCTCCATCCCCCCAACTCAAAAGCCCAACTCTTTACCTTTCAAGCTCCGAACTTTCCGCTTCAGGCGGCACCAATCCCTAAAATGCATCCAATCCCCACCGTCCGATCCCACCCCCAAAAACCCTACCTTCTCCTGCTCCGCCGCCACCCTCTCCCCCTCCCCCACCTCCTCCGCCGCCGACGACCTCGCTCCCTCCAAGCTCCGCCGCCTCGCATCCGAATTCCACTCCCTCACCGAGCCCCTCGACCGCGTCAAGCGCCTCCTCCACTACGCCGCCCTCCTCCCGCCGCTCCCTGATTCGGGTCGGGTCGACGCCAACCGGGTCATGGGATGCACGGCCCAGGTCTGGCTCGACGCCAAGATGGATCACGACGGCAAGATGCGGTTCGCCGCCGACAGCGACTCCGAGATCACTCGAGGGTTCTGCTCGTGTCTGGTGTCTGTTCTCGACGGGGCGGCGCCGGAGGAGGTTCTGGCGGTCAAGACCGATGACCTGGCGGCGCTTAATGTTGGGTTGCCTGGTGCGCAGAGGTCTAGGGTTAACACGTGGCATAATGTGTTGGTCAGTATTCACAAAAAGACTAAGGCTTTGGTGGCTGAGCTACAGGGGACGCCGCCGTTCGAGCCGTTCCCGTCTCTGGTGATCACCGCCGATGGGATTCAGGCCAAAGGTAGCTACGCCGAAACCCAGGCGAGGTATTTGTTTCCGGATGAGGATAAGGTTGAGGAGCTTGTTAATGTGTTAAAGGAGAAGAAGATTGGGGTGGTTGCTCATTTTTACATGGACCCTGAGGTTCAGGGTATTTTGACTGCTGCGAAGAAGCATTGGCCTCATATCCACATTTCGGATTCGTTGGTCATGGCGGACTCGGCTTTGGAGATGGCGAAAGATGGATGCGAGTTTATTACAGTTTTGGGGGTTGATTTTATGTCAGAGAATGTCAGGGCGATCCTTGATCAGGCAGGCTTTCAAAAGGTCGGTGTATACAGAATGTCAAGTGAACGAATTAGTTGTTCTTTGGCAGATGCTGCGTCTTCGCCTTCTTATATGAGTTACCTTGAGAATGCTTCTAGGTCACCTCAGTCATTGCATGTTGTCTACATTAATACGTCACTGGAGACAAAAGCTTATGCACATGAGATTGTGCCAACAATTACCTGTACTTCTTCAAATGTTGTCCAAACCATTCTTCAGGCTTTTTCTCAAGTGCTAGATTTAAATGTATGGTATGGTCCGGACTCTTACATGGGTGCAAATATTAGAGTATTGCTTGAGCAAATGACAAAGATGACAGATGAAGAAATTGCTGAGATACATCCAGCACACAATAGAGACTCAATCAGATCTCTGCTACCTCGCCTGCATTATTATCAGGATGGGACATGCATAGTGCATCATTTATTTGGAAATGAGGTTGTGAATAGGATAAATGAAATGTATTGTGATGCATTTCTAACTGCTCATTTTGAGGTCCCTGGAGAAATGTTTGCTTTGGCAATGGAAGCAAAGAGAAGAGGAATGGGAGTTGTGGGGTCTACCCAAAACATTCTAGATTTCATAAAGCAAAAGGTTCAAGACGCTTTAGATAGAAATATCAATGACCACCTTCAGTTTGTGTTAGGGACGGAATCTGGAATGGTTACTTCAATTGTTGCATTAGTTCGCAATTTGTTAGGTTCTGCAAAGTCAGGGGGAGCAAAGATCAATGTTGAAATTGTATTTCCAGTTTCATCAGATTCAATGACAAGCACATCAACCAATTCTTCTTCAGGCCTCAGCCCTGTTAAGATGGGTGATGTCATACTGCCTGTTATACCTGGAGTGGCTAGTGGGGAGGGGTGTTCTATTAATGGAGGGTGTGCATCCTGTCCATACATGAAGATGAATTCTCTCAGCTCCCTCCTGAAGGTTTGTCACCACCTACCTGATGAGACTGACACTGCCATTTCCGCATATGAAGCTGCACGATTCAAGCTGCAAACTCCCAATGGAAAATCAGTTGCGGATGTCGGATGTGAACCAATTCTGCACATGAGGCACTTCCAGGCCTCTAAAAAACTTCCAGAGAAGCTTGTTTTCCAAATCTGTAATCCGTCCACAAATGGGAAGTCGTCAATAAGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006091 GO:0006139 GO:0006520 GO:0006531 GO:0006725 GO:0006732 GO:0006733 GO:0006753 GO:0006790 GO:0006793 GO:0006796 GO:0006807 GO:0008047 GO:0008150 GO:0008152 GO:0008987 GO:0009058 GO:0009060 GO:0009066 GO:0009108 GO:0009117 GO:0009165 GO:0009435 GO:0009507 GO:0009536 GO:0009893 GO:0009987 GO:0015980 GO:0016043 GO:0016053 GO:0016226 GO:0017144 GO:0018130 GO:0019222 GO:0019355 GO:0019359 GO:0019362 GO:0019363 GO:0019438 GO:0019637 GO:0019674 GO:0019752 GO:0019805 GO:0022607 GO:0030234 GO:0031163 GO:0031323 GO:0031325 GO:0034627 GO:0034628 GO:0034641 GO:0034654 GO:0042762 GO:0042802 GO:0042803 GO:0043085 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043648 GO:0043650 GO:0044085 GO:0044093 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0045333 GO:0046394 GO:0046483 GO:0046496 GO:0046874 GO:0046983 GO:0048037 GO:0048518 GO:0048522 GO:0050789 GO:0050790 GO:0050794 GO:0051176 GO:0051186 GO:0051188 GO:0051536 GO:0051539 GO:0051540 GO:0055086 GO:0055114 GO:0065007 GO:0065009 GO:0071704 GO:0071840 GO:0072524 GO:0072525 GO:0090407 GO:0098772 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901605

KEGG Pathways

Metabolic & Signaling

ko00760 ko01100 map00760 map01100

Pfam Domains

Protein Families

NadA SufE

Protein Analysis

734

Amino Acids

79.77

Weight (kDa)

6.3

Isoelectric Point (pI)

57.23

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SufE	PF02657	98 - 218	3.6e-29	Fe-S metabolism associated domain
NadA	PF02445	270 - 576	9e-30	Quinolinate synthetase A protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0013570)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G50210
fragaria_vesca	FvH4_5g06430 FvH4_5g06430 FvH4_5g06430 FvH4_5g06430
malus_domestica	MD06G1164800.v1.1 MD14G1170100.v1.1
prunus_persica	Prupe.5G164300_v2.0.a1
pyrus_communis	pycom06g14740
rosa_chinensis	RchiOBHm_Chr7g0192351
rosa_laevigata	RLG00000004377
rosa_multiflora	Rmu_sc0003108.1_g000001
rosa_roxburghii	Rroxscaffold_3G00263110
rosa_rugosa	Rorug07G0000600
rosa_samantha	Rh7BG126800 Rh7CG128400 Rh7DG128400
rosa_wichuraiana	Rw7G010710

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	603
AccB1I	GGYRCC	2 cut(s)	144, 535
AccBSI	CCGCTC	1 cut(s)	367
AccI	GTMKAC	4 cut(s)	387, 1062, 1176, 1613
AccII	CGCG	1 cut(s)	327
AccIII	TCCGGA	2 cut(s)	784, 1312
AclWI	GGATC	3 cut(s)	176, 450, 1021
AcsI	RAATTY	2 cut(s)	296, 1963
AcuI	CTGAAG	5 cut(s)	121, 1253, 1670, 1830, 2003
AcvI	CACGTG	1 cut(s)	624
AcyI	GRCGYC	4 cut(s)	390, 432, 536, 689
AfaI	GTAC	1 cut(s)	1240
AflIII	ACRYGT	1 cut(s)	621
AgsI	TTSAA	8 cut(s)	118, 1049, 1248, 1652, 1725, 1790, 1818, 2050
AjnI	CCWGG	7 cut(s)	417, 570, 595, 765, 1552, 1894, 2121
AjuI	GAANNNNNNNTTGG	2 cut(s)	1251, 1283
Alw26I	GTCTC	4 cut(s)	717, 1190, 1404, 2003
AlwI	GGATC	3 cut(s)	176, 450, 1021
AlwNI	CAGNNNCTG	1 cut(s)	1106
Ama87I	CYCGRG	1 cut(s)	492
Aor13HI	TCCGGA	2 cut(s)	784, 1312
AoxI	GGCC	5 cut(s)	414, 741, 905, 1849, 2124
ApeKI	GCWGC	4 cut(s)	890, 1106, 2039, 2053
ApoI	RAATTY	2 cut(s)	296, 1963
ArsI	GACNNNNNNTTYG	3 cut(s)	649, 681, 2171
AseI	ATTAAT	2 cut(s)	1182, 1926
Asp700I	GAANNNNTTC	1 cut(s)	2100
AspLEI	GCGC	4 cut(s)	336, 538, 580, 604
AspS9I	GGNCC	4 cut(s)	415, 862, 1310, 1549
AsuC2I	CCSGG	1 cut(s)	398
AsuHPI	GGTGA	6 cut(s)	301, 715, 730, 1146, 1883, 1985
AvaI	CYCGRG	1 cut(s)	492
AvaII	GGWCC	3 cut(s)	862, 1310, 1549
AxyI	CCTNAGG	1 cut(s)	867
BanI	GGYRCC	2 cut(s)	144, 535
BanII	GRGCYC	1 cut(s)	318
BauI	CACGAG	1 cut(s)	505
BbrPI	CACGTG	1 cut(s)	624
BbsI	GAAGAC	1 cut(s)	1104
BbvCI	CCTCAGC	1 cut(s)	1853
BbvI	GCAGC	4 cut(s)	877, 1093, 2026, 2040
BccI	CCATC	7 cut(s)	89, 433, 725, 952, 962, 1448, 1861
BceAI	ACGGC	4 cut(s)	429, 466, 679, 688
BcgI	CGANNNNNNTGC	2 cut(s)	483, 517
BciT130I	CCWGG	7 cut(s)	419, 572, 597, 767, 1554, 1896, 2123
BclI	TGATCA	2 cut(s)	720, 1033
BcnI	CCSGG	1 cut(s)	398
BcoDI	GTCTC	4 cut(s)	717, 1190, 1404, 2003
BfaI	CTAG	5 cut(s)	612, 1149, 1289, 1628, 1905
BfmI	CTRYAG	1 cut(s)	680
BfoI	RGCGCY	3 cut(s)	337, 539, 581
BglII	AGATCT	1 cut(s)	1421
BlpI	GCTNAGC	1 cut(s)	675
Bme1390I	CCNGG	8 cut(s)	398, 419, 572, 597, 767, 1554, 1896, 2123
Bme18I	GGWCC	3 cut(s)	862, 1310, 1549
BmeT110I	CYCGRG	1 cut(s)	492
BmgT120I	GGNCC	4 cut(s)	415, 862, 1310, 1549
BmiI	GGNNCC	4 cut(s)	146, 537, 864, 1551
BmrFI	CCNGG	8 cut(s)	398, 419, 572, 597, 767, 1554, 1896, 2123
BmsI	GCATC	9 cut(s)	171, 299, 398, 447, 962, 1093, 1480, 1513, 1949
BpiI	GAAGAC	1 cut(s)	1104
BpmI	CTGGAG	3 cut(s)	1214, 1575, 1917
Bpu10I	CCTNAGC	1 cut(s)	1853
Bpu1102I	GCTNAGC	1 cut(s)	675
BpuEI	CTTGAG	3 cut(s)	1157, 1266, 1370
BpuMI	CCSGG	1 cut(s)	398
BsaAI	YACGTR	1 cut(s)	624
BsaHI	GRCGYC	4 cut(s)	390, 432, 536, 689
BsaJI	CCNNGG	3 cut(s)	417, 765, 1552
BsaWI	WCCGGW	2 cut(s)	784, 1312
BsaXI	ACNNNNNCTCC	2 cut(s)	464, 494
Bse1I	ACTGG	2 cut(s)	1197, 1802
Bse21I	CCTNAGG	1 cut(s)	867
Bse3DI	GCAATG	2 cut(s)	1163, 1581
BseAI	TCCGGA	2 cut(s)	784, 1312
BseBI	CCWGG	7 cut(s)	419, 572, 597, 767, 1554, 1896, 2123
BseDI	CCNNGG	3 cut(s)	417, 765, 1552
BseMI	GCAATG	2 cut(s)	1163, 1581
BseMII	CTCAG	6 cut(s)	666, 858, 1172, 1377, 1867, 1984
BseNI	ACTGG	2 cut(s)	1197, 1802
BseRI	GAGGAG	8 cut(s)	49, 52, 55, 235, 329, 347, 557, 818
BseXI	GCAGC	4 cut(s)	877, 1093, 2026, 2040
BsgI	GTGCAG	2 cut(s)	2025, 2090
Bsh1236I	CGCG	1 cut(s)	327
Bsh1285I	CGRYCG	1 cut(s)	325
BshFI	GGCC	5 cut(s)	416, 743, 907, 1851, 2126
BshNI	GGYRCC	2 cut(s)	144, 535
BsiEI	CGRYCG	1 cut(s)	325
BsiHKCI	CYCGRG	1 cut(s)	492
BsiSI	CCGG	4 cut(s)	397, 539, 785, 1313
BslFI	GGGAC	4 cut(s)	700, 1471, 1535, 1714
BsmAI	GTCTC	4 cut(s)	717, 1190, 1404, 2003
BsmBI	CGTCTC	1 cut(s)	717
BsmFI	GGGAC	4 cut(s)	700, 1471, 1535, 1714
BsmI	GAATGC	1 cut(s)	1147
BsnI	GGCC	5 cut(s)	416, 743, 907, 1851, 2126
BsoBI	CYCGRG	1 cut(s)	492
Bsp1286I	GDGCHC	1 cut(s)	318
Bsp13I	TCCGGA	2 cut(s)	784, 1312
Bsp143I	GATC	8 cut(s)	181, 442, 486, 720, 1026, 1033, 1421, 1779
Bsp1720I	GCTNAGC	1 cut(s)	675
BspANI	GGCC	5 cut(s)	416, 743, 907, 1851, 2126
BspCNI	CTCAG	6 cut(s)	667, 859, 1171, 1378, 1866, 1983
BspEI	TCCGGA	2 cut(s)	784, 1312
BspFNI	CGCG	1 cut(s)	327
BspLI	GGNNCC	4 cut(s)	146, 537, 864, 1551
BspPI	GGATC	3 cut(s)	176, 450, 1021
BspT107I	GGYRCC	2 cut(s)	144, 535
BsrBI	CCGCTC	1 cut(s)	367
BsrDI	GCAATG	2 cut(s)	1163, 1581
BsrI	ACTGG	2 cut(s)	1197, 1802
BssECI	CCNNGG	3 cut(s)	417, 765, 1552
BssMI	GATC	8 cut(s)	181, 442, 486, 720, 1026, 1033, 1421, 1779
BssNAI	GTATAC	1 cut(s)	1063
BssNI	GRCGYC	4 cut(s)	390, 432, 536, 689
BssSI	CACGAG	1 cut(s)	505
Bst1107I	GTATAC	1 cut(s)	1063
Bst2BI	CACGAG	1 cut(s)	505
Bst2UI	CCWGG	7 cut(s)	419, 572, 597, 767, 1554, 1896, 2123
Bst4CI	ACNGT	2 cut(s)	177, 988
Bst6I	CTCTTC	2 cut(s)	73, 1585
BstACI	GRCGYC	4 cut(s)	390, 432, 536, 689
BstAPI	GCANNNNNTGC	1 cut(s)	1106
BstBAI	YACGTR	1 cut(s)	624
BstC8I	GCNNGC	2 cut(s)	1042, 1439
BstDEI	CTNAG	8 cut(s)	32, 660, 675, 867, 1158, 1386, 1853, 1970
BstEII	GGTNACC	1 cut(s)	1152
BstENI	CCTNNNNNAGG	2 cut(s)	1034, 1982
BstFNI	CGCG	1 cut(s)	327
BstH2I	RGCGCY	3 cut(s)	337, 539, 581
BstHHI	GCGC	4 cut(s)	336, 538, 580, 604
BstKTI	GATC	8 cut(s)	184, 445, 489, 723, 1029, 1036, 1424, 1782
BstMAI	GTCTC	4 cut(s)	717, 1190, 1404, 2003
BstMBI	GATC	8 cut(s)	181, 442, 486, 720, 1026, 1033, 1421, 1779
BstMCI	CGRYCG	1 cut(s)	325
BstNI	CCWGG	7 cut(s)	419, 572, 597, 767, 1554, 1896, 2123
BstNSI	RCATGY	2 cut(s)	1172, 1464
BstPI	GGTNACC	1 cut(s)	1152
BstSCI	CCNGG	8 cut(s)	396, 417, 570, 595, 765, 1552, 1894, 2121
BstSFI	CTRYAG	1 cut(s)	680
BstUI	CGCG	1 cut(s)	327
BstV1I	GCAGC	4 cut(s)	877, 1093, 2026, 2040
BstV2I	GAAGAC	1 cut(s)	1104
BstX2I	RGATCY	1 cut(s)	1421
BstYI	RGATCY	1 cut(s)	1421
BstZ17I	GTATAC	1 cut(s)	1063
Bsu36I	CCTNAGG	1 cut(s)	867
BsuRI	GGCC	5 cut(s)	416, 743, 907, 1851, 2126
BtsI	GCAGTG	1 cut(s)	2016
BtsIMutI	CAGTG	2 cut(s)	1190, 2016
Cac8I	GCNNGC	2 cut(s)	1042, 1439
CaiI	CAGNNNCTG	1 cut(s)	1106
CfoI	GCGC	4 cut(s)	336, 538, 580, 604
Cfr13I	GGNCC	4 cut(s)	415, 862, 1310, 1549
CseI	GACGC	6 cut(s)	316, 398, 440, 697, 1098, 1664
Csp6I	GTAC	1 cut(s)	1239
CviQI	GTAC	1 cut(s)	1239
DdeI	CTNAG	8 cut(s)	32, 660, 675, 867, 1158, 1386, 1853, 1970
DinI	GGCGCC	1 cut(s)	537
DpnI	GATC	8 cut(s)	183, 444, 488, 722, 1028, 1035, 1423, 1781
DpnII	GATC	8 cut(s)	181, 442, 486, 720, 1026, 1033, 1421, 1779
DraI	TTTAAA	1 cut(s)	1296
Eam1104I	CTCTTC	2 cut(s)	73, 1585
EarI	CTCTTC	2 cut(s)	73, 1585
EciI	GGCGGA	4 cut(s)	205, 238, 269, 956
Eco147I	AGGCCT	2 cut(s)	1851, 2126
Eco24I	GRGCYC	1 cut(s)	318
Eco47I	GGWCC	3 cut(s)	862, 1310, 1549
Eco57I	CTGAAG	5 cut(s)	121, 1253, 1670, 1830, 2003
Eco72I	CACGTG	1 cut(s)	624
Eco81I	CCTNAGG	1 cut(s)	867
Eco88I	CYCGRG	1 cut(s)	492
Eco91I	GGTNACC	1 cut(s)	1152
EcoNI	CCTNNNNNAGG	2 cut(s)	1034, 1982
EcoO109I	RGGNCCY	1 cut(s)	1549
EcoO65I	GGTNACC	1 cut(s)	1152
EcoRI	GAATTC	2 cut(s)	296, 1963
EcoRII	CCWGG	7 cut(s)	417, 570, 595, 765, 1552, 1894, 2121
EcoT22I	ATGCAT	3 cut(s)	164, 1466, 1528
EcoT38I	GRGCYC	1 cut(s)	318
EgeI	GGCGCC	1 cut(s)	537
EheI	GGCGCC	1 cut(s)	537
Esp3I	CGTCTC	1 cut(s)	717
FaqI	GGGAC	4 cut(s)	700, 1471, 1535, 1714
FauI	CCCGC	1 cut(s)	369
FauNDI	CATATG	1 cut(s)	2032
FbaI	TGATCA	2 cut(s)	720, 1033
FblI	GTMKAC	4 cut(s)	387, 1062, 1176, 1613
FriOI	GRGCYC	1 cut(s)	318
FspBI	CTAG	5 cut(s)	612, 1149, 1289, 1628, 1905
FspI	TGCGCA	1 cut(s)	603
GlaI	GCGC	4 cut(s)	335, 537, 579, 603
GsuI	CTGGAG	3 cut(s)	1214, 1575, 1917
HaeII	RGCGCY	3 cut(s)	337, 539, 581
HaeIII	GGCC	5 cut(s)	416, 743, 907, 1851, 2126
HapII	CCGG	4 cut(s)	397, 539, 785, 1313
HgaI	GACGC	6 cut(s)	316, 398, 440, 697, 1098, 1664
HhaI	GCGC	4 cut(s)	336, 538, 580, 604
Hin1I	GRCGYC	4 cut(s)	390, 432, 536, 689
Hin6I	GCGC	4 cut(s)	334, 536, 578, 602
HinP1I	GCGC	4 cut(s)	334, 536, 578, 602
HincII	GTYRAC	2 cut(s)	388, 619
HindII	GTYRAC	2 cut(s)	388, 619
HindIII	AAGCTT	2 cut(s)	1203, 2147
HpaI	GTTAAC	1 cut(s)	619
HpaII	CCGG	4 cut(s)	397, 539, 785, 1313
HphI	GGTGA	6 cut(s)	301, 715, 730, 1146, 1883, 1985
Hpy166II	GTNNAC	8 cut(s)	388, 619, 1063, 1079, 1177, 1614, 2096, 2175
Hpy188I	TCNGA	9 cut(s)	125, 181, 295, 484, 925, 1012, 1421, 1813, 2090
Hpy8I	GTNNAC	8 cut(s)	388, 619, 1063, 1079, 1177, 1614, 2096, 2175
Hpy99I	CGWCG	5 cut(s)	260, 392, 434, 452, 530
HpyAV	CCTTC	5 cut(s)	82, 214, 1128, 1694, 1978
HpyCH4III	ACNGT	2 cut(s)	177, 988
HpyCH4IV	ACGT	2 cut(s)	623, 1187
HpyF3I	CTNAG	8 cut(s)	32, 660, 675, 867, 1158, 1386, 1853, 1970
HpySE526I	ACGT	2 cut(s)	623, 1187
Hsp92I	GRCGYC	4 cut(s)	390, 432, 536, 689
HspAI	GCGC	4 cut(s)	334, 536, 578, 602
KasI	GGCGCC	1 cut(s)	535
Kpn2I	TCCGGA	2 cut(s)	784, 1312
Ksp22I	TGATCA	2 cut(s)	720, 1033
KspAI	GTTAAC	1 cut(s)	619
Kzo9I	GATC	8 cut(s)	181, 442, 486, 720, 1026, 1033, 1421, 1779
LmnI	GCTCC	8 cut(s)	126, 218, 271, 282, 372, 805, 1772, 1979
Lsp1109I	GCAGC	4 cut(s)	877, 1093, 2026, 2040
LweI	GCATC	9 cut(s)	171, 299, 398, 447, 962, 1093, 1480, 1513, 1949
MaeI	CTAG	5 cut(s)	612, 1149, 1289, 1628, 1905
MaeII	ACGT	2 cut(s)	623, 1187
MaeIII	GTNAC	5 cut(s)	1130, 1152, 1188, 1717, 1991
MalI	GATC	8 cut(s)	183, 444, 488, 722, 1028, 1035, 1423, 1781
MbiI	CCGCTC	1 cut(s)	367
MboI	GATC	8 cut(s)	181, 442, 486, 720, 1026, 1033, 1421, 1779
MfeI	CAATTG	1 cut(s)	1725
MflI	RGATCY	1 cut(s)	1421
MhlI	GDGCHC	1 cut(s)	318
Mly113I	GGCGCC	1 cut(s)	536
MlyI	GAGTC	5 cut(s)	37, 473, 938, 1310, 1406
MmeI	TCCRAC	1 cut(s)	2068
Mph1103I	ATGCAT	3 cut(s)	164, 1466, 1528
MroI	TCCGGA	2 cut(s)	784, 1312
MroXI	GAANNNNTTC	1 cut(s)	2100
MseI	TTAA	8 cut(s)	582, 618, 813, 821, 1182, 1295, 1863, 1926
MslI	CAYNNNNRTG	2 cut(s)	23, 1958
MspI	CCGG	4 cut(s)	397, 539, 785, 1313
MspR9I	CCNGG	8 cut(s)	398, 419, 572, 597, 767, 1554, 1896, 2123
MunI	CAATTG	1 cut(s)	1725
Mva1269I	GAATGC	1 cut(s)	1147
MvaI	CCWGG	7 cut(s)	419, 572, 597, 767, 1554, 1896, 2123
MvnI	CGCG	1 cut(s)	327
NarI	GGCGCC	1 cut(s)	536
NciI	CCSGG	1 cut(s)	398
NdeI	CATATG	1 cut(s)	2032
NdeII	GATC	8 cut(s)	181, 442, 486, 720, 1026, 1033, 1421, 1779
NlaIV	GGNNCC	4 cut(s)	146, 537, 864, 1551
NmeAIII	GCCGAG	1 cut(s)	926
NmuCI	GTSAC	3 cut(s)	1152, 1188, 1991
NsbI	TGCGCA	1 cut(s)	603
NsiI	ATGCAT	3 cut(s)	164, 1466, 1528
NspI	RCATGY	2 cut(s)	1172, 1464
PaeR7I	CTCGAG	1 cut(s)	492
PceI	AGGCCT	2 cut(s)	1851, 2126
PctI	GAATGC	1 cut(s)	1147
PdmI	GAANNNNTTC	1 cut(s)	2100
PfeI	GAWTC	6 cut(s)	374, 736, 926, 1706, 1814, 2046
PflFI	GACNNNGTC	1 cut(s)	326
PleI	GAGTC	5 cut(s)	36, 473, 938, 1310, 1406
PluTI	GGCGCC	1 cut(s)	539
PmaCI	CACGTG	1 cut(s)	624
PmlI	CACGTG	1 cut(s)	624
PpsI	GAGTC	5 cut(s)	36, 473, 938, 1310, 1406
Ppu21I	YACGTR	1 cut(s)	624
PpuMI	RGGWCCY	1 cut(s)	1549
PshBI	ATTAAT	2 cut(s)	1182, 1926
Psp5II	RGGWCCY	1 cut(s)	1549
Psp6I	CCWGG	7 cut(s)	417, 570, 595, 765, 1552, 1894, 2121
PspCI	CACGTG	1 cut(s)	624
PspEI	GGTNACC	1 cut(s)	1152
PspGI	CCWGG	7 cut(s)	417, 570, 595, 765, 1552, 1894, 2121
PspN4I	GGNNCC	4 cut(s)	146, 537, 864, 1551
PspPI	GGNCC	4 cut(s)	415, 862, 1310, 1549
PspPPI	RGGWCCY	1 cut(s)	1549
PspXI	VCTCGAGB	1 cut(s)	492
PstNI	CAGNNNCTG	1 cut(s)	1106
PsuI	RGATCY	1 cut(s)	1421
PsyI	GACNNNGTC	1 cut(s)	326
RsaI	GTAC	1 cut(s)	1240
RsaNI	GTAC	1 cut(s)	1239
RseI	CAYNNNNRTG	2 cut(s)	23, 1958
SalI	GTCGAC	1 cut(s)	386
SaqAI	TTAA	8 cut(s)	582, 618, 813, 821, 1182, 1295, 1863, 1926
Sau3AI	GATC	8 cut(s)	181, 442, 486, 720, 1026, 1033, 1421, 1779
Sau96I	GGNCC	4 cut(s)	415, 862, 1310, 1549
SchI	GAGTC	5 cut(s)	37, 473, 938, 1310, 1406
ScrFI	CCNGG	8 cut(s)	398, 419, 572, 597, 767, 1554, 1896, 2123
SduI	GDGCHC	1 cut(s)	318
SfaNI	GCATC	9 cut(s)	171, 299, 398, 447, 962, 1093, 1480, 1513, 1949
SfcI	CTRYAG	1 cut(s)	680
SfoI	GGCGCC	1 cut(s)	537
Sfr274I	CTCGAG	1 cut(s)	492
SinI	GGWCC	3 cut(s)	862, 1310, 1549
SlaI	CTCGAG	1 cut(s)	492
SmiI	ATTTAAAT	1 cut(s)	1296
SmiMI	CAYNNNNRTG	2 cut(s)	23, 1958
SmlI	CTYRAG	4 cut(s)	492, 1136, 1281, 1349
SmoI	CTYRAG	4 cut(s)	492, 1136, 1281, 1349
SseBI	AGGCCT	2 cut(s)	1851, 2126
SspDI	GGCGCC	1 cut(s)	535
SspI	AATATT	1 cut(s)	1336
SspMI	CTAG	5 cut(s)	612, 1149, 1289, 1628, 1905
StuI	AGGCCT	2 cut(s)	1851, 2126
StyD4I	CCNGG	8 cut(s)	396, 417, 570, 595, 765, 1552, 1894, 2121
SwaI	ATTTAAAT	1 cut(s)	1296
TaaI	ACNGT	2 cut(s)	177, 988
TaiI	ACGT	2 cut(s)	626, 1190
TaqI	TCGA	6 cut(s)	321, 387, 429, 493, 525, 699
TaqII	GACCGA	1 cut(s)	578
TatI	WGTACW	1 cut(s)	1238
TfiI	GAWTC	6 cut(s)	374, 736, 926, 1706, 1814, 2046
Tru1I	TTAA	8 cut(s)	582, 618, 813, 821, 1182, 1295, 1863, 1926
Tru9I	TTAA	8 cut(s)	582, 618, 813, 821, 1182, 1295, 1863, 1926
TscAI	CASTG	2 cut(s)	1197, 2023
TseFI	GTSAC	3 cut(s)	1152, 1188, 1991
TseI	GCWGC	4 cut(s)	890, 1106, 2039, 2053
Tsp45I	GTSAC	3 cut(s)	1152, 1188, 1991
TspDTI	ATGAA	7 cut(s)	1389, 1524, 1624, 1797, 1970, 1976, 2049
TspGWI	ACGGA	2 cut(s)	1718, 2160
TspRI	CASTG	2 cut(s)	1197, 2023
Tth111I	GACNNNGTC	1 cut(s)	326
VpaK11BI	GGWCC	3 cut(s)	862, 1310, 1549
VspI	ATTAAT	2 cut(s)	1182, 1926
XagI	CCTNNNNNAGG	2 cut(s)	1034, 1982
XapI	RAATTY	2 cut(s)	296, 1963
XbaI	TCTAGA	1 cut(s)	1627
XceI	RCATGY	2 cut(s)	1172, 1464
XcmI	CCANNNNNNNNNTGG	1 cut(s)	400
XhoI	CTCGAG	1 cut(s)	492
XmiI	GTMKAC	4 cut(s)	387, 1062, 1176, 1613
XmnI	GAANNNNTTC	1 cut(s)	2100
XspI	CTAG	5 cut(s)	612, 1149, 1289, 1628, 1905
Zsp2I	ATGCAT	3 cut(s)	164, 1466, 1528

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.