Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7D

Orthogroup ID

OG0013570

Physical Location & Seq

Genomic Coordinates Forward (+)

10809114 .. 10812427

Gene Structure 3314 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7DG128400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2202 bp

ATGGAGTCTTCTGCAACCACCATGGCTTTGAGAGCCACCTCTTCTTCTTCTTCTTCCTCTTCATCCTCCTCCTCCTTCTTCTCCTCCATTCCCCCAACCCAAAAGCCCCAGTCTTTGCCTTTCAAGCTCCAACCTTTTCGCTTTAAGAGGCACCAATCCCTAAAATGCATCCAGTCCCCACCGTCCGATCCCAACCCCAAAAACCCTACCTTCTCCTGCTCCGCCGCCACCCTCTCCCCCTCTCCCACCGCCGACCTCGCTCCCTCCAAGCTCCACCGCCTCGTCTCCGAGTTCCAGTCCCTCACGCAGCCGATCGACCGTGTCAAGCGGCTGCTGCACTACGCCAGCCTCCTCCCGCCGCTCCCCGATTCGGGTCGGGCCGACGCCAACCGGGTCATGGGCTGCACGGCCCAGGTCTGGCTGGAGGCCAAGATGGACCAGGGCGGCAAGATGAGGTTCGCGGCGGACAGCGATTCCGAGATCACCAGAGGGTTCTGCTCGTGTTTGGTGTCCGTTCTCGACGGGGCCGCGCCGGAGGAGGTCTTGGCCGTCAAGACCGACGACCTGGCGGCGCTCAACGTTGTTGGGTTGCCCGGTGCGCAGAGGTCTAGGGTTAATACGTGGCATAATGTGTTGGTCAGTATGCACAAAAAGACTAAAGCTTTAATGGCTGAGCTACAGGGGAAGCCGCCGTTCGAGCGCTTCCCGTCTCTGGTCATCACCGCCGATGGGATTCAGGCCAAGGGTAGCTACGCCGAAGCCCAGGCAAGGTATTTGTTTCCGGATGAGGCTAAGGTTGAGGAACTTGTTAATGTGTTGAAAGAGAAGAAGATTGGGGTGGTTGCTCATTTTTACATGGATCCTGAGGTTCAGGGTATTTTGACTGCAGCAAAGAAGCATTGGCCTCACATTCACATTTCGGATTCGTTGGTCATGGCAGATTCGGCTGTGAAGATGGCGAAAGATGGATGCGAGTTTATTACAGTTTTGGGTGTTGATTTTATGTCTGAAAATGTCAGGGCGATCCTTGATCAAGCCGGCTTTCAAAAGGTCGGTGTTTTCAGGATGTCAAATGAACGAATTGGTTGTTCTTTGGCAGATGCTGCATCTTCCCCTTCTTATTTGAGTTATCTCGAGAATGCTTCAAGGTCACCTCAGTCATTGCATGTTGTCTACATTAATACATCACTGGAAACAAAAGCTTATGCACATGAGCTTGTGCCAACAATTACCTGTACTTCTTCAAATGTTGTCCAAACCATTCTGCAGGCTTTTTCTCAAGTGCCAGATTTAAACGTATGGTACGGTCCTGACTCTTACATGGGTGCAAATATTAGAGTATTGCTTGAGCAGATGACAAAGATGACGGATGAAGAAATTGCTGAGATACATCCAGCACACAATAGAGACTCAATCAGATCTCTGCTACCTCGCCTACATCATTATCAGGATGGGACATGCATAGTGCATCATTTGTTTGGAAATGAAGTTGTGAACAGGATAAATGAAATGTATTGTGATGCATTTCTAACTGCTCATTTCGAGGTCCCTGGAGAAATGTTTGCTCTGGCAATGGAAGCAAAGAGGAGAGGAATGGGAGTTGTGGGGTCTACCCAAAACATTCTAGATTTCATAAAACAGAGGGTTCAAGAGGCTTTAGACAGAAATGTCAATGACCACCTTCAGTTCATATTAGGAACAGAATCTGGAATGGTGACTTCAATTGTTGCACTAGTTCGCAGTTTGTTAGGTTCTGCAAAGTCAGGGGGAGCAAAGATCAATGTTGAAATTGTATTTCCAGTTTCATCAGACTCAATGACAAGCACATCATCCAATTCTTCTTCAGGCCTTAACCCTATTAAGGTGGGTGATGTCATACTACCTGTTATACCTGGAGTGGCTAGTGGGGAGGGGTGTTCAATTCATGGTGGGTGTGCATCCTGTCCGTACATGAAGATGAATTCTCTCAGCTCCCTCCTGAAGGTTTGCTACCACCTACCTGATGAGACTGACAGCGCCATTTCTGCATATGAAGCTGCACGATTCAAGTTGCAAACTCCCAATGGAAGATCAGTTGCGGATGTTGGGTGTGAACCAATTCTGCACATGAGGCACTTCCAGGCCTCTAAAAAACTTCCAGAGAAGCTTGTTTTCCAGATCTGTAATCCGTCCGGTAATGGAAAGTCGTTGTCAATAAGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006091 GO:0006139 GO:0006520 GO:0006531 GO:0006725 GO:0006732 GO:0006733 GO:0006753 GO:0006790 GO:0006793 GO:0006796 GO:0006807 GO:0008047 GO:0008150 GO:0008152 GO:0008987 GO:0009058 GO:0009060 GO:0009066 GO:0009108 GO:0009117 GO:0009165 GO:0009435 GO:0009507 GO:0009536 GO:0009893 GO:0009987 GO:0015980 GO:0016043 GO:0016053 GO:0016226 GO:0017144 GO:0018130 GO:0019222 GO:0019355 GO:0019359 GO:0019362 GO:0019363 GO:0019438 GO:0019637 GO:0019674 GO:0019752 GO:0019805 GO:0022607 GO:0030234 GO:0031163 GO:0031323 GO:0031325 GO:0034627 GO:0034628 GO:0034641 GO:0034654 GO:0042762 GO:0042802 GO:0042803 GO:0043085 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043648 GO:0043650 GO:0044085 GO:0044093 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0045333 GO:0046394 GO:0046483 GO:0046496 GO:0046874 GO:0046983 GO:0048037 GO:0048518 GO:0048522 GO:0050789 GO:0050790 GO:0050794 GO:0051176 GO:0051186 GO:0051188 GO:0051536 GO:0051539 GO:0051540 GO:0055086 GO:0055114 GO:0065007 GO:0065009 GO:0071704 GO:0071840 GO:0072524 GO:0072525 GO:0090407 GO:0098772 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901605

KEGG Pathways

Metabolic & Signaling

ko00760 ko01100 map00760 map01100

Pfam Domains

Protein Families

NadA SufE

Protein Analysis

733

Amino Acids

79.67

Weight (kDa)

6.91

Isoelectric Point (pI)

56.36

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SufE	PF02657	96 - 217	6e-30	Fe-S metabolism associated domain
NadA	PF02445	269 - 575	1.2e-30	Quinolinate synthetase A protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0013570)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G50210
fragaria_vesca	FvH4_5g06430 FvH4_5g06430 FvH4_5g06430 FvH4_5g06430
malus_domestica	MD06G1164800.v1.1 MD14G1170100.v1.1
prunus_persica	Prupe.5G164300_v2.0.a1
pyrus_communis	pycom06g14740
rosa_chinensis	RchiOBHm_Chr7g0192351
rosa_laevigata	RLG00000004377
rosa_multiflora	Rmu_sc0003108.1_g000001
rosa_roxburghii	Rroxscaffold_3G00263110
rosa_rugosa	Rorug07G0000600
rosa_samantha	Rh7BG126800 Rh7CG128400 Rh7DG128400
rosa_wichuraiana	Rw7G010710

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1667
Acc16I	TGCGCA	1 cut(s)	600
AccB1I	GGYRCC	1 cut(s)	150
AccBSI	CCGCTC	1 cut(s)	361
AccI	GTMKAC	2 cut(s)	1173, 1610
AccII	CGCG	2 cut(s)	461, 530
AccIII	TCCGGA	1 cut(s)	781
AclI	AACGTT	1 cut(s)	579
AclWI	GGATC	4 cut(s)	182, 854, 867, 1018
AcoI	YGGCCR	1 cut(s)	546
AcsI	RAATTY	1 cut(s)	1960
AcuI	CTGAAG	3 cut(s)	1667, 1827, 2000
AcyI	GRCGYC	1 cut(s)	384
AfaI	GTAC	3 cut(s)	1237, 1304, 1949
AfeI	AGCGCT	1 cut(s)	701
AfiI	CCNNNNNNNGG	9 cut(s)	370, 371, 397, 417, 712, 729, 768, 1861, 1981
AhlI	ACTAGT	1 cut(s)	1732
AjnI	CCWGG	7 cut(s)	411, 438, 564, 762, 1549, 1891, 2118
Alw26I	GTCTC	4 cut(s)	289, 714, 1401, 2000
AlwI	GGATC	4 cut(s)	182, 854, 867, 1018
AlwNI	CAGNNNCTG	2 cut(s)	1103, 1706
Ama87I	CYCGRG	1 cut(s)	1133
Aor13HI	TCCGGA	1 cut(s)	781
Aor51HI	AGCGCT	1 cut(s)	701
AoxI	GGCC	9 cut(s)	378, 408, 426, 525, 546, 738, 902, 1846, 2121
ApeKI	GCWGC	7 cut(s)	307, 331, 334, 402, 887, 1103, 2036
ApoI	RAATTY	1 cut(s)	1960
AseI	ATTAAT	1 cut(s)	1179
Asp700I	GAANNNNTTC	1 cut(s)	2097
AspLEI	GCGC	5 cut(s)	532, 574, 601, 702, 2018
AspS9I	GGNCC	6 cut(s)	378, 409, 436, 525, 1307, 1546
AsuC2I	CCSGG	2 cut(s)	392, 594
AsuHPI	GGTGA	5 cut(s)	475, 712, 1143, 1726, 1880
AvaI	CYCGRG	1 cut(s)	1133
AvaII	GGWCC	3 cut(s)	436, 1307, 1546
AxyI	CCTNAGG	1 cut(s)	864
BamHI	GGATCC	1 cut(s)	859
BanI	GGYRCC	1 cut(s)	150
BarI	GAAGNNNNNNTAC	2 cut(s)	1973, 2005
BauI	CACGAG	1 cut(s)	499
BbvI	GCAGC	7 cut(s)	318, 319, 321, 389, 899, 1090, 2023
BccI	CCATC	5 cut(s)	427, 722, 949, 959, 1445
BceAI	ACGGC	3 cut(s)	423, 533, 676
BciT130I	CCWGG	7 cut(s)	413, 440, 566, 764, 1551, 1893, 2120
BclI	TGATCA	1 cut(s)	1030
BcnI	CCSGG	2 cut(s)	392, 594
BcoDI	GTCTC	4 cut(s)	289, 714, 1401, 2000
BcuI	ACTAGT	1 cut(s)	1732
BfaI	CTAG	4 cut(s)	609, 1625, 1733, 1902
BfmI	CTRYAG	3 cut(s)	677, 885, 1265
BfoI	RGCGCY	3 cut(s)	575, 703, 2019
BglII	AGATCT	2 cut(s)	1418, 2157
BlpI	GCTNAGC	1 cut(s)	672
Bme1390I	CCNGG	9 cut(s)	392, 413, 440, 566, 594, 764, 1551, 1893, 2120
Bme18I	GGWCC	3 cut(s)	436, 1307, 1546
BmeT110I	CYCGRG	1 cut(s)	1133
BmgT120I	GGNCC	6 cut(s)	378, 409, 436, 525, 1307, 1546
BmiI	GGNNCC	4 cut(s)	152, 526, 861, 1548
BmrFI	CCNGG	9 cut(s)	392, 413, 440, 566, 594, 764, 1551, 1893, 2120
BmrI	ACTGGG	1 cut(s)	103
BmsI	GCATC	7 cut(s)	177, 959, 1090, 1115, 1477, 1510, 1946
BmuI	ACTGGG	1 cut(s)	103
BpmI	CTGGAG	3 cut(s)	443, 1572, 1914
Bpu10I	CCTNAGC	1 cut(s)	792
Bpu1102I	GCTNAGC	1 cut(s)	672
BpuEI	CTTGAG	2 cut(s)	1263, 1367
BpuMI	CCSGG	2 cut(s)	392, 594
BsaAI	YACGTR	1 cut(s)	621
BsaHI	GRCGYC	1 cut(s)	384
BsaJI	CCNNGG	6 cut(s)	21, 411, 439, 741, 762, 1549
BsaWI	WCCGGW	2 cut(s)	781, 2171
Bsc4I	CCNNNNNNNGG	9 cut(s)	370, 371, 397, 417, 712, 729, 768, 1861, 1981
Bse118I	RCCGGY	1 cut(s)	1037
Bse1I	ACTGG	5 cut(s)	109, 172, 295, 1194, 1799
Bse21I	CCTNAGG	1 cut(s)	864
Bse3DI	GCAATG	2 cut(s)	1160, 1578
BseAI	TCCGGA	1 cut(s)	781
BseBI	CCWGG	7 cut(s)	413, 440, 566, 764, 1551, 1893, 2120
BseDI	CCNNGG	6 cut(s)	21, 411, 439, 741, 762, 1549
BseLI	CCNNNNNNNGG	9 cut(s)	370, 371, 397, 417, 712, 729, 768, 1861, 1981
BseMI	GCAATG	2 cut(s)	1160, 1578
BseMII	CTCAG	5 cut(s)	663, 855, 1169, 1374, 1981
BseNI	ACTGG	5 cut(s)	109, 172, 295, 1194, 1799
BseRI	GAGGAG	6 cut(s)	58, 61, 73, 341, 551, 1600
BseXI	GCAGC	7 cut(s)	318, 319, 321, 389, 899, 1090, 2023
BsgI	GTGCAG	4 cut(s)	320, 388, 2022, 2087
Bsh1236I	CGCG	2 cut(s)	461, 530
Bsh1285I	CGRYCG	2 cut(s)	315, 319
BshFI	GGCC	9 cut(s)	380, 410, 428, 527, 548, 740, 904, 1848, 2123
BshNI	GGYRCC	1 cut(s)	150
BsiEI	CGRYCG	2 cut(s)	315, 319
BsiHKCI	CYCGRG	1 cut(s)	1133
BsiSI	CCGG	6 cut(s)	391, 533, 594, 782, 1038, 2172
BslFI	GGGAC	4 cut(s)	160, 283, 1468, 1532
BslI	CCNNNNNNNGG	9 cut(s)	370, 371, 397, 417, 712, 729, 768, 1861, 1981
BsmAI	GTCTC	4 cut(s)	289, 714, 1401, 2000
BsmBI	CGTCTC	2 cut(s)	289, 714
BsmFI	GGGAC	4 cut(s)	160, 283, 1468, 1532
BsmI	GAATGC	1 cut(s)	1144
BsnI	GGCC	9 cut(s)	380, 410, 428, 527, 548, 740, 904, 1848, 2123
BsoBI	CYCGRG	1 cut(s)	1133
Bsp13I	TCCGGA	1 cut(s)	781
Bsp1720I	GCTNAGC	1 cut(s)	672
Bsp19I	CCATGG	1 cut(s)	21
BspANI	GGCC	9 cut(s)	380, 410, 428, 527, 548, 740, 904, 1848, 2123
BspCNI	CTCAG	5 cut(s)	664, 856, 1168, 1375, 1980
BspEI	TCCGGA	1 cut(s)	781
BspFNI	CGCG	2 cut(s)	461, 530
BspLI	GGNNCC	4 cut(s)	152, 526, 861, 1548
BspMAI	CTGCAG	2 cut(s)	889, 1269
BspPI	GGATC	4 cut(s)	182, 854, 867, 1018
BspT107I	GGYRCC	1 cut(s)	150
BsrBI	CCGCTC	1 cut(s)	361
BsrDI	GCAATG	2 cut(s)	1160, 1578
BsrFI	RCCGGY	1 cut(s)	1037
BsrI	ACTGG	5 cut(s)	109, 172, 295, 1194, 1799
BssAI	RCCGGY	1 cut(s)	1037
BssECI	CCNNGG	6 cut(s)	21, 411, 439, 741, 762, 1549
BssNI	GRCGYC	1 cut(s)	384
BssSI	CACGAG	1 cut(s)	499
BssT1I	CCWWGG	2 cut(s)	21, 741
Bst2BI	CACGAG	1 cut(s)	499
Bst2UI	CCWGG	7 cut(s)	413, 440, 566, 764, 1551, 1893, 2120
Bst4CI	ACNGT	4 cut(s)	183, 320, 985, 1307
Bst6I	CTCTTC	2 cut(s)	46, 64
BstACI	GRCGYC	1 cut(s)	384
BstAPI	GCANNNNNTGC	1 cut(s)	1103
BstBAI	YACGTR	1 cut(s)	621
BstC8I	GCNNGC	3 cut(s)	346, 1039, 1269
BstDEI	CTNAG	6 cut(s)	672, 792, 864, 1155, 1383, 1967
BstDSI	CCRYGG	1 cut(s)	21
BstEII	GGTNACC	1 cut(s)	1149
BstENI	CCTNNNNNAGG	1 cut(s)	1979
BstFNI	CGCG	2 cut(s)	461, 530
BstH2I	RGCGCY	3 cut(s)	575, 703, 2019
BstHHI	GCGC	5 cut(s)	532, 574, 601, 702, 2018
BstMAI	GTCTC	4 cut(s)	289, 714, 1401, 2000
BstMCI	CGRYCG	2 cut(s)	315, 319
BstNI	CCWGG	7 cut(s)	413, 440, 566, 764, 1551, 1893, 2120
BstNSI	RCATGY	2 cut(s)	1169, 1461
BstPI	GGTNACC	1 cut(s)	1149
BstSCI	CCNGG	9 cut(s)	390, 411, 438, 564, 592, 762, 1549, 1891, 2118
BstSFI	CTRYAG	3 cut(s)	677, 885, 1265
BstUI	CGCG	2 cut(s)	461, 530
BstV1I	GCAGC	7 cut(s)	318, 319, 321, 389, 899, 1090, 2023
BstX2I	RGATCY	3 cut(s)	859, 1418, 2157
BstYI	RGATCY	3 cut(s)	859, 1418, 2157
Bsu36I	CCTNAGG	1 cut(s)	864
BsuRI	GGCC	9 cut(s)	380, 410, 428, 527, 548, 740, 904, 1848, 2123
BtgI	CCRYGG	1 cut(s)	21
BtsIMutI	CAGTG	1 cut(s)	1187
Cac8I	GCNNGC	3 cut(s)	346, 1039, 1269
CaiI	CAGNNNCTG	2 cut(s)	1103, 1706
CfoI	GCGC	5 cut(s)	532, 574, 601, 702, 2018
Cfr10I	RCCGGY	1 cut(s)	1037
Cfr13I	GGNCC	6 cut(s)	378, 409, 436, 525, 1307, 1546
CseI	GACGC	1 cut(s)	392
Csp6I	GTAC	3 cut(s)	1236, 1303, 1948
CviQI	GTAC	3 cut(s)	1236, 1303, 1948
DdeI	CTNAG	6 cut(s)	672, 792, 864, 1155, 1383, 1967
DraI	TTTAAA	1 cut(s)	1293
DrdI	GACNNNNNNGTC	1 cut(s)	1667
DseDI	GACNNNNNNGTC	1 cut(s)	1667
EaeI	YGGCCR	1 cut(s)	546
Eam1104I	CTCTTC	2 cut(s)	46, 64
EarI	CTCTTC	2 cut(s)	46, 64
EciI	GGCGGA	2 cut(s)	211, 479
Eco130I	CCWWGG	2 cut(s)	21, 741
Eco147I	AGGCCT	2 cut(s)	1848, 2123
Eco47I	GGWCC	3 cut(s)	436, 1307, 1546
Eco47III	AGCGCT	1 cut(s)	701
Eco57I	CTGAAG	3 cut(s)	1667, 1827, 2000
Eco81I	CCTNAGG	1 cut(s)	864
Eco88I	CYCGRG	1 cut(s)	1133
Eco91I	GGTNACC	1 cut(s)	1149
EcoNI	CCTNNNNNAGG	1 cut(s)	1979
EcoO109I	RGGNCCY	1 cut(s)	1546
EcoO65I	GGTNACC	1 cut(s)	1149
EcoRI	GAATTC	1 cut(s)	1960
EcoRII	CCWGG	7 cut(s)	411, 438, 564, 762, 1549, 1891, 2118
EcoT14I	CCWWGG	2 cut(s)	21, 741
EcoT22I	ATGCAT	3 cut(s)	170, 1463, 1525
ErhI	CCWWGG	2 cut(s)	21, 741
Esp3I	CGTCTC	2 cut(s)	289, 714
FaqI	GGGAC	4 cut(s)	160, 283, 1468, 1532
FauI	CCCGC	1 cut(s)	363
FauNDI	CATATG	1 cut(s)	2029
FbaI	TGATCA	1 cut(s)	1030
FblI	GTMKAC	2 cut(s)	1173, 1610
FspBI	CTAG	4 cut(s)	609, 1625, 1733, 1902
FspI	TGCGCA	1 cut(s)	600
GlaI	GCGC	5 cut(s)	531, 573, 600, 701, 2017
GsuI	CTGGAG	3 cut(s)	443, 1572, 1914
HaeII	RGCGCY	3 cut(s)	575, 703, 2019
HaeIII	GGCC	9 cut(s)	380, 410, 428, 527, 548, 740, 904, 1848, 2123
HapII	CCGG	6 cut(s)	391, 533, 594, 782, 1038, 2172
HgaI	GACGC	1 cut(s)	392
HhaI	GCGC	5 cut(s)	532, 574, 601, 702, 2018
Hin1I	GRCGYC	1 cut(s)	384
Hin6I	GCGC	5 cut(s)	530, 572, 599, 700, 2016
HinP1I	GCGC	5 cut(s)	530, 572, 599, 700, 2016
HindIII	AAGCTT	3 cut(s)	660, 1200, 2144
HpaII	CCGG	6 cut(s)	391, 533, 594, 782, 1038, 2172
HphI	GGTGA	5 cut(s)	475, 712, 1143, 1726, 1880
Hpy166II	GTNNAC	4 cut(s)	1174, 1495, 1611, 2093
Hpy188I	TCNGA	7 cut(s)	187, 289, 478, 922, 1009, 1418, 1810
Hpy8I	GTNNAC	4 cut(s)	1174, 1495, 1611, 2093
Hpy99I	CGWCG	3 cut(s)	386, 524, 563
HpyAV	CCTTC	5 cut(s)	85, 220, 1125, 1691, 1975
HpyCH4III	ACNGT	4 cut(s)	183, 320, 985, 1307
HpyCH4IV	ACGT	3 cut(s)	579, 620, 1296
HpyF3I	CTNAG	6 cut(s)	672, 792, 864, 1155, 1383, 1967
HpySE526I	ACGT	3 cut(s)	579, 620, 1296
Hsp92I	GRCGYC	1 cut(s)	384
HspAI	GCGC	5 cut(s)	530, 572, 599, 700, 2016
Kpn2I	TCCGGA	1 cut(s)	781
KroI	GCCGGC	1 cut(s)	1037
KroNI	GCCGGC	1 cut(s)	1039
Ksp22I	TGATCA	1 cut(s)	1030
LmnI	GCTCC	7 cut(s)	132, 224, 265, 276, 366, 1769, 1976
Lsp1109I	GCAGC	7 cut(s)	318, 319, 321, 389, 899, 1090, 2023
LweI	GCATC	7 cut(s)	177, 959, 1090, 1115, 1477, 1510, 1946
MaeI	CTAG	4 cut(s)	609, 1625, 1733, 1902
MaeII	ACGT	3 cut(s)	579, 620, 1296
MaeIII	GTNAC	2 cut(s)	1149, 1714
MbiI	CCGCTC	1 cut(s)	361
MfeI	CAATTG	1 cut(s)	1722
MflI	RGATCY	3 cut(s)	859, 1418, 2157
MluCI	AATT	9 cut(s)	1080, 1227, 1377, 1722, 1788, 1834, 1920, 1960, 2097
MlyI	GAGTC	4 cut(s)	14, 1307, 1403, 1805
MmeI	TCCRAC	1 cut(s)	154
Mph1103I	ATGCAT	3 cut(s)	170, 1463, 1525
MroI	TCCGGA	1 cut(s)	781
MroNI	GCCGGC	1 cut(s)	1037
MroXI	GAANNNNTTC	1 cut(s)	2097
MseI	TTAA	8 cut(s)	144, 615, 665, 810, 1179, 1292, 1851, 1860
MslI	CAYNNNNRTG	1 cut(s)	1955
MspI	CCGG	6 cut(s)	391, 533, 594, 782, 1038, 2172
MspR9I	CCNGG	9 cut(s)	392, 413, 440, 566, 594, 764, 1551, 1893, 2120
MunI	CAATTG	1 cut(s)	1722
Mva1269I	GAATGC	1 cut(s)	1144
MvaI	CCWGG	7 cut(s)	413, 440, 566, 764, 1551, 1893, 2120
MvnI	CGCG	2 cut(s)	461, 530
NaeI	GCCGGC	1 cut(s)	1039
NciI	CCSGG	2 cut(s)	392, 594
NcoI	CCATGG	1 cut(s)	21
NdeI	CATATG	1 cut(s)	2029
NgoMIV	GCCGGC	1 cut(s)	1037
NlaIV	GGNNCC	4 cut(s)	152, 526, 861, 1548
NmuCI	GTSAC	2 cut(s)	1149, 1714
NsbI	TGCGCA	1 cut(s)	600
NsiI	ATGCAT	3 cut(s)	170, 1463, 1525
NspI	RCATGY	2 cut(s)	1169, 1461
PaeR7I	CTCGAG	1 cut(s)	1133
PceI	AGGCCT	2 cut(s)	1848, 2123
PctI	GAATGC	1 cut(s)	1144
PdiI	GCCGGC	1 cut(s)	1039
PdmI	GAANNNNTTC	1 cut(s)	2097
PfeI	GAWTC	7 cut(s)	368, 473, 733, 923, 941, 1703, 2043
PflFI	GACNNNGTC	1 cut(s)	320
Ple19I	CGATCG	1 cut(s)	315
PleI	GAGTC	4 cut(s)	13, 1307, 1403, 1805
PpsI	GAGTC	4 cut(s)	13, 1307, 1403, 1805
Ppu21I	YACGTR	1 cut(s)	621
PpuMI	RGGWCCY	1 cut(s)	1546
PshBI	ATTAAT	1 cut(s)	1179
Psp1406I	AACGTT	1 cut(s)	579
Psp5II	RGGWCCY	1 cut(s)	1546
Psp6I	CCWGG	7 cut(s)	411, 438, 564, 762, 1549, 1891, 2118
PspEI	GGTNACC	1 cut(s)	1149
PspGI	CCWGG	7 cut(s)	411, 438, 564, 762, 1549, 1891, 2118
PspN4I	GGNNCC	4 cut(s)	152, 526, 861, 1548
PspPI	GGNCC	6 cut(s)	378, 409, 436, 525, 1307, 1546
PspPPI	RGGWCCY	1 cut(s)	1546
PstI	CTGCAG	2 cut(s)	889, 1269
PstNI	CAGNNNCTG	2 cut(s)	1103, 1706
PsuI	RGATCY	3 cut(s)	859, 1418, 2157
PsyI	GACNNNGTC	1 cut(s)	320
PvuI	CGATCG	1 cut(s)	315
RsaI	GTAC	3 cut(s)	1237, 1304, 1949
RsaNI	GTAC	3 cut(s)	1236, 1303, 1948
RseI	CAYNNNNRTG	1 cut(s)	1955
SaqAI	TTAA	8 cut(s)	144, 615, 665, 810, 1179, 1292, 1851, 1860
Sau96I	GGNCC	6 cut(s)	378, 409, 436, 525, 1307, 1546
SchI	GAGTC	4 cut(s)	14, 1307, 1403, 1805
ScrFI	CCNGG	9 cut(s)	392, 413, 440, 566, 594, 764, 1551, 1893, 2120
SfaNI	GCATC	7 cut(s)	177, 959, 1090, 1115, 1477, 1510, 1946
SfcI	CTRYAG	3 cut(s)	677, 885, 1265
Sfr274I	CTCGAG	1 cut(s)	1133
SinI	GGWCC	3 cut(s)	436, 1307, 1546
SlaI	CTCGAG	1 cut(s)	1133
SmiMI	CAYNNNNRTG	1 cut(s)	1955
SmlI	CTYRAG	3 cut(s)	1133, 1278, 1346
SmoI	CTYRAG	3 cut(s)	1133, 1278, 1346
SpeI	ACTAGT	1 cut(s)	1732
Sse9I	AATT	9 cut(s)	1080, 1227, 1377, 1722, 1788, 1834, 1920, 1960, 2097
SseBI	AGGCCT	2 cut(s)	1848, 2123
SspI	AATATT	1 cut(s)	1333
SspMI	CTAG	4 cut(s)	609, 1625, 1733, 1902
StuI	AGGCCT	2 cut(s)	1848, 2123
StyD4I	CCNGG	9 cut(s)	390, 411, 438, 564, 592, 762, 1549, 1891, 2118
StyI	CCWWGG	2 cut(s)	21, 741
TaaI	ACNGT	4 cut(s)	183, 320, 985, 1307
TaiI	ACGT	3 cut(s)	582, 623, 1299
TaqI	TCGA	5 cut(s)	315, 519, 696, 1134, 1542
TaqII	GACCGA	1 cut(s)	572
TasI	AATT	9 cut(s)	1080, 1227, 1377, 1722, 1788, 1834, 1920, 1960, 2097
TatI	WGTACW	1 cut(s)	1235
TauI	GCSGC	8 cut(s)	227, 331, 361, 447, 464, 530, 572, 691
TfiI	GAWTC	7 cut(s)	368, 473, 733, 923, 941, 1703, 2043
Tru1I	TTAA	8 cut(s)	144, 615, 665, 810, 1179, 1292, 1851, 1860
Tru9I	TTAA	8 cut(s)	144, 615, 665, 810, 1179, 1292, 1851, 1860
TscAI	CASTG	1 cut(s)	1194
TseFI	GTSAC	2 cut(s)	1149, 1714
TseI	GCWGC	7 cut(s)	307, 331, 334, 402, 887, 1103, 2036
Tsp45I	GTSAC	2 cut(s)	1149, 1714
TspGWI	ACGGA	4 cut(s)	502, 1382, 1935, 2157
TspRI	CASTG	1 cut(s)	1194
Tth111I	GACNNNGTC	1 cut(s)	320
VpaK11BI	GGWCC	3 cut(s)	436, 1307, 1546
VspI	ATTAAT	1 cut(s)	1179
XagI	CCTNNNNNAGG	1 cut(s)	1979
XapI	RAATTY	1 cut(s)	1960
XbaI	TCTAGA	1 cut(s)	1624
XceI	RCATGY	2 cut(s)	1169, 1461
XcmI	CCANNNNNNNNNTGG	1 cut(s)	394
XhoI	CTCGAG	1 cut(s)	1133
XmiI	GTMKAC	2 cut(s)	1173, 1610
XmnI	GAANNNNTTC	1 cut(s)	2097
XspI	CTAG	4 cut(s)	609, 1625, 1733, 1902
Zsp2I	ATGCAT	3 cut(s)	170, 1463, 1525

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.