Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0003108.1

Orthogroup ID

OG0013570

Physical Location & Seq

Genomic Coordinates Forward (+)

2290 .. 5594

Gene Structure 3305 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0003108.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2199 bp

atggagtcttctgcaaccaccatggctttgagagccacctcttcttcttcttcctcttcatcctcctcctccttcttctcctccattcccccaactcaaaagccccagtctttgcctttcaagctccaaccttttcgctttaagaggcaccaatccctaaaatgcatccaatccccaccgtccgatcccaaccccaaaaaccctaccttctcctgctccgccgccaccctctccccctctcccaccgccgacctcgctccctccaagctccaccgcctcgtctccgagttccagtccctcacgcagccgatcgaccgtgtcaagcggctgctgcactacgccagcctcctcccgccgctccccgattcgggtcgggccgacgccaaccgggtcatgggctgcacggcccaggtctggctggaggccaagatggaccagggcggcaagatgaggttcgcggcggacagcgattccgagatcaccagagggttctgctcgtgtttggtgtccgttctcgacggggccgcgccggaggaggtcttggccgtcaagaccgacgacctggcggcgctcaacgttgttgggttgcccggtgcgcagaggtctagggttaatacgtggcataatgtgttggtcagtatgcacaaaaagactaaagctttaatggctgagctacaggggaagccgccgttcgagcgcttcccgtctctggtcatcaccgccgatgggattcaggccaagggtagctacgccgaagcccaggcaaggtatttgtttccggatgaggctaaggttgaggaacttgttaatgtgttgaaagagaagaagattggggtggttgctcatttttacatggatcctgaggttcagggtattttgactgcagccaagaagcattggcctcacattcacatttcggattcgttggtcatggcagattcggctgtgaagatggcgaaagatggatgcgagtttattacagttttgggtgttgattttatgtctgaaaatgtcagggcgatccttgatcaggccggctttcaaaaggtcggtgttttcaggatgtcaaatgaacgaattggttgttctttggcagatgctgcatcttccccttcttatttgagttatctcgagaatgcttcaaggtcacctcagtcattgcatgttgtctacattaatacatcactggaaacaaaagcttatgcacatgagcttgtgccaacaattacctgtacttcttcaaatgttgtccaaaccattctgcaggctttttctcaagtgccagatttaaacgtatggtacggtcctgactcttacatgggtgcaaatattagagtattacttgagcagatgacaaagatgacagatgaagaaattgctgagatacatccagcacacaatagagactcaatcagatctctgctacctcgcctgcatcattatcaggatgggacatgcatagtgcatcatttgtttggaaatgaggttgtgaataggataaatgaaatgtattgtgatgcatttctaactgctcatttcgaggtccctggagaaatgtttgctctggcaatggaagcaaagaggagaggaatgggtgttgtggggtctacccaaaacattctagatttcataaaacagagggttcaagaggctttagacagaaatgtcaatgaccaccttcagttcatattaggaacagaatctggaatggtgacttcaattgttgcactagttcgcagtttgttaggttctgcaaagtcagggggagcaaagatcaatgttgaaattgtatttccagtttcgtcagactcaatgacaagcacatcatccaattcttcttcaggccttaaccctattaaggtgggtgatgtcatactacctgttatacctggagtggctagtggggaggggtgttcaattcatggtgggtgtgcatcctgtccgtacatgaagatgaattctctcagctccctcctgaaggtttgctaccacctacctgatgtgactgacaacgccatttctgcatatgaagctgcacgattcaagttgcaaactcccaatggaagatcagttgcggatgttgggtgtgaaccaattctgcacatgaggcacttccaggcctctaaaaaacttccagagaagcttgttttccagatctgtaatccgtccggtaatggaaagtcgttgtcaataagctga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006091 GO:0006139 GO:0006520 GO:0006531 GO:0006725 GO:0006732 GO:0006733 GO:0006753 GO:0006790 GO:0006793 GO:0006796 GO:0006807 GO:0008047 GO:0008150 GO:0008152 GO:0008987 GO:0009058 GO:0009060 GO:0009066 GO:0009108 GO:0009117 GO:0009165 GO:0009435 GO:0009507 GO:0009536 GO:0009893 GO:0009987 GO:0015980 GO:0016043 GO:0016053 GO:0016226 GO:0017144 GO:0018130 GO:0019222 GO:0019355 GO:0019359 GO:0019362 GO:0019363 GO:0019438 GO:0019637 GO:0019674 GO:0019752 GO:0019805 GO:0022607 GO:0030234 GO:0031163 GO:0031323 GO:0031325 GO:0034627 GO:0034628 GO:0034641 GO:0034654 GO:0042762 GO:0042802 GO:0042803 GO:0043085 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043648 GO:0043650 GO:0044085 GO:0044093 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0045333 GO:0046394 GO:0046483 GO:0046496 GO:0046874 GO:0046983 GO:0048037 GO:0048518 GO:0048522 GO:0050789 GO:0050790 GO:0050794 GO:0051176 GO:0051186 GO:0051188 GO:0051536 GO:0051539 GO:0051540 GO:0055086 GO:0055114 GO:0065007 GO:0065009 GO:0071704 GO:0071840 GO:0072524 GO:0072525 GO:0090407 GO:0098772 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901605

KEGG Pathways

Metabolic & Signaling

ko00760 ko01100 map00760 map01100

Pfam Domains

Protein Families

NadA SufE

Protein Analysis

732

Amino Acids

79.58

Weight (kDa)

7.08

Isoelectric Point (pI)

55.78

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0013570)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G50210
fragaria_vesca	FvH4_5g06430 FvH4_5g06430 FvH4_5g06430 FvH4_5g06430
malus_domestica	MD06G1164800.v1.1 MD14G1170100.v1.1
prunus_persica	Prupe.5G164300_v2.0.a1
pyrus_communis	pycom06g14740
rosa_chinensis	RchiOBHm_Chr7g0192351
rosa_laevigata	RLG00000004377
rosa_multiflora	Rmu_sc0003108.1_g000001
rosa_roxburghii	Rroxscaffold_3G00263110
rosa_rugosa	Rorug07G0000600
rosa_samantha	Rh7BG126800 Rh7CG128400 Rh7DG128400
rosa_wichuraiana	Rw7G010710

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1664
Acc16I	TGCGCA	1 cut(s)	597
AccB1I	GGYRCC	1 cut(s)	147
AccBSI	CCGCTC	1 cut(s)	358
AccI	GTMKAC	2 cut(s)	1170, 1607
AccII	CGCG	2 cut(s)	458, 527
AccIII	TCCGGA	1 cut(s)	778
AclI	AACGTT	1 cut(s)	576
AclWI	GGATC	4 cut(s)	179, 851, 864, 1015
AcoI	YGGCCR	1 cut(s)	543
AcsI	RAATTY	1 cut(s)	1957
AcuI	CTGAAG	3 cut(s)	1664, 1824, 1997
AcyI	GRCGYC	1 cut(s)	381
AfaI	GTAC	3 cut(s)	1234, 1301, 1946
AfeI	AGCGCT	1 cut(s)	698
AhlI	ACTAGT	1 cut(s)	1729
AjnI	CCWGG	7 cut(s)	408, 435, 561, 759, 1546, 1888, 2115
Alw26I	GTCTC	3 cut(s)	286, 711, 1398
AlwI	GGATC	4 cut(s)	179, 851, 864, 1015
AlwNI	CAGNNNCTG	2 cut(s)	1100, 1703
Ama87I	CYCGRG	1 cut(s)	1130
Aor13HI	TCCGGA	1 cut(s)	778
Aor51HI	AGCGCT	1 cut(s)	698
ApeKI	GCWGC	7 cut(s)	304, 328, 331, 399, 884, 1100, 2033
ApoI	RAATTY	1 cut(s)	1957
AseI	ATTAAT	1 cut(s)	1176
Asp700I	GAANNNNTTC	1 cut(s)	2094
AspLEI	GCGC	4 cut(s)	529, 571, 598, 699
AspS9I	GGNCC	6 cut(s)	375, 406, 433, 522, 1304, 1543
AsuC2I	CCSGG	2 cut(s)	389, 591
AsuHPI	GGTGA	5 cut(s)	472, 709, 1140, 1723, 1877
AvaI	CYCGRG	1 cut(s)	1130
AvaII	GGWCC	3 cut(s)	433, 1304, 1543
AxyI	CCTNAGG	1 cut(s)	861
BamHI	GGATCC	1 cut(s)	856
BanI	GGYRCC	1 cut(s)	147
BarI	GAAGNNNNNNTAC	2 cut(s)	1970, 2002
BauI	CACGAG	1 cut(s)	496
BbvI	GCAGC	7 cut(s)	315, 316, 318, 386, 896, 1087, 2020
BccI	CCATC	5 cut(s)	424, 719, 946, 956, 1442
BceAI	ACGGC	3 cut(s)	420, 530, 673
BciT130I	CCWGG	7 cut(s)	410, 437, 563, 761, 1548, 1890, 2117
BclI	TGATCA	1 cut(s)	1027
BcnI	CCSGG	2 cut(s)	389, 591
BcoDI	GTCTC	3 cut(s)	286, 711, 1398
BcuI	ACTAGT	1 cut(s)	1729
BfaI	CTAG	4 cut(s)	606, 1622, 1730, 1899
BfmI	CTRYAG	3 cut(s)	674, 882, 1262
BfoI	RGCGCY	2 cut(s)	572, 700
BglII	AGATCT	2 cut(s)	1415, 2154
BlpI	GCTNAGC	1 cut(s)	669
Bme1390I	CCNGG	9 cut(s)	389, 410, 437, 563, 591, 761, 1548, 1890, 2117
Bme18I	GGWCC	3 cut(s)	433, 1304, 1543
BmeT110I	CYCGRG	1 cut(s)	1130
BmgT120I	GGNCC	6 cut(s)	375, 406, 433, 522, 1304, 1543
BmiI	GGNNCC	4 cut(s)	149, 523, 858, 1545
BmrFI	CCNGG	9 cut(s)	389, 410, 437, 563, 591, 761, 1548, 1890, 2117
BmrI	ACTGGG	1 cut(s)	100
BmsI	GCATC	8 cut(s)	174, 956, 1087, 1112, 1444, 1474, 1507, 1943
BmuI	ACTGGG	1 cut(s)	100
BpmI	CTGGAG	3 cut(s)	440, 1569, 1911
Bpu10I	CCTNAGC	1 cut(s)	789
Bpu1102I	GCTNAGC	1 cut(s)	669
BpuEI	CTTGAG	2 cut(s)	1260, 1364
BpuMI	CCSGG	2 cut(s)	389, 591
BsaAI	YACGTR	1 cut(s)	618
BsaHI	GRCGYC	1 cut(s)	381
BsaJI	CCNNGG	6 cut(s)	21, 408, 436, 738, 759, 1546
BsaWI	WCCGGW	2 cut(s)	778, 2168
Bse118I	RCCGGY	1 cut(s)	1034
Bse1I	ACTGG	4 cut(s)	106, 292, 1191, 1796
Bse21I	CCTNAGG	1 cut(s)	861
Bse3DI	GCAATG	2 cut(s)	1157, 1575
BseAI	TCCGGA	1 cut(s)	778
BseBI	CCWGG	7 cut(s)	410, 437, 563, 761, 1548, 1890, 2117
BseDI	CCNNGG	6 cut(s)	21, 408, 436, 738, 759, 1546
BseMI	GCAATG	2 cut(s)	1157, 1575
BseMII	CTCAG	5 cut(s)	660, 852, 1166, 1371, 1978
BseNI	ACTGG	4 cut(s)	106, 292, 1191, 1796
BseRI	GAGGAG	6 cut(s)	55, 58, 70, 338, 548, 1597
BseXI	GCAGC	7 cut(s)	315, 316, 318, 386, 896, 1087, 2020
BsgI	GTGCAG	4 cut(s)	317, 385, 2019, 2084
Bsh1236I	CGCG	2 cut(s)	458, 527
Bsh1285I	CGRYCG	2 cut(s)	312, 316
BshNI	GGYRCC	1 cut(s)	147
BsiEI	CGRYCG	2 cut(s)	312, 316
BsiHKCI	CYCGRG	1 cut(s)	1130
BsiSI	CCGG	6 cut(s)	388, 530, 591, 779, 1035, 2169
BslFI	GGGAC	3 cut(s)	280, 1465, 1529
BsmAI	GTCTC	3 cut(s)	286, 711, 1398
BsmBI	CGTCTC	2 cut(s)	286, 711
BsmFI	GGGAC	3 cut(s)	280, 1465, 1529
BsmI	GAATGC	1 cut(s)	1141
BsoBI	CYCGRG	1 cut(s)	1130
Bsp13I	TCCGGA	1 cut(s)	778
Bsp1720I	GCTNAGC	1 cut(s)	669
Bsp19I	CCATGG	1 cut(s)	21
BspCNI	CTCAG	5 cut(s)	661, 853, 1165, 1372, 1977
BspEI	TCCGGA	1 cut(s)	778
BspFNI	CGCG	2 cut(s)	458, 527
BspLI	GGNNCC	4 cut(s)	149, 523, 858, 1545
BspMAI	CTGCAG	2 cut(s)	886, 1266
BspPI	GGATC	4 cut(s)	179, 851, 864, 1015
BspT107I	GGYRCC	1 cut(s)	147
BsrBI	CCGCTC	1 cut(s)	358
BsrDI	GCAATG	2 cut(s)	1157, 1575
BsrFI	RCCGGY	1 cut(s)	1034
BsrI	ACTGG	4 cut(s)	106, 292, 1191, 1796
BssAI	RCCGGY	1 cut(s)	1034
BssECI	CCNNGG	6 cut(s)	21, 408, 436, 738, 759, 1546
BssNI	GRCGYC	1 cut(s)	381
BssSI	CACGAG	1 cut(s)	496
BssT1I	CCWWGG	2 cut(s)	21, 738
Bst2BI	CACGAG	1 cut(s)	496
Bst2UI	CCWGG	7 cut(s)	410, 437, 563, 761, 1548, 1890, 2117
Bst4CI	ACNGT	4 cut(s)	180, 317, 982, 1304
Bst6I	CTCTTC	2 cut(s)	46, 61
BstACI	GRCGYC	1 cut(s)	381
BstAPI	GCANNNNNTGC	1 cut(s)	1100
BstBAI	YACGTR	1 cut(s)	618
BstC8I	GCNNGC	4 cut(s)	343, 1036, 1266, 1433
BstDEI	CTNAG	6 cut(s)	669, 789, 861, 1152, 1380, 1964
BstDSI	CCRYGG	1 cut(s)	21
BstEII	GGTNACC	1 cut(s)	1146
BstENI	CCTNNNNNAGG	2 cut(s)	1028, 1976
BstFNI	CGCG	2 cut(s)	458, 527
BstH2I	RGCGCY	2 cut(s)	572, 700
BstHHI	GCGC	4 cut(s)	529, 571, 598, 699
BstMAI	GTCTC	3 cut(s)	286, 711, 1398
BstMCI	CGRYCG	2 cut(s)	312, 316
BstNI	CCWGG	7 cut(s)	410, 437, 563, 761, 1548, 1890, 2117
BstNSI	RCATGY	2 cut(s)	1166, 1458
BstPI	GGTNACC	1 cut(s)	1146
BstSCI	CCNGG	9 cut(s)	387, 408, 435, 561, 589, 759, 1546, 1888, 2115
BstSFI	CTRYAG	3 cut(s)	674, 882, 1262
BstUI	CGCG	2 cut(s)	458, 527
BstV1I	GCAGC	7 cut(s)	315, 316, 318, 386, 896, 1087, 2020
BstX2I	RGATCY	3 cut(s)	856, 1415, 2154
BstYI	RGATCY	3 cut(s)	856, 1415, 2154
Bsu36I	CCTNAGG	1 cut(s)	861
BtgI	CCRYGG	1 cut(s)	21
BtsIMutI	CAGTG	1 cut(s)	1184
Cac8I	GCNNGC	4 cut(s)	343, 1036, 1266, 1433
CaiI	CAGNNNCTG	2 cut(s)	1100, 1703
CfoI	GCGC	4 cut(s)	529, 571, 598, 699
Cfr10I	RCCGGY	1 cut(s)	1034
Cfr13I	GGNCC	6 cut(s)	375, 406, 433, 522, 1304, 1543
CseI	GACGC	1 cut(s)	389
Csp6I	GTAC	3 cut(s)	1233, 1300, 1945
CviQI	GTAC	3 cut(s)	1233, 1300, 1945
DdeI	CTNAG	6 cut(s)	669, 789, 861, 1152, 1380, 1964
DraI	TTTAAA	1 cut(s)	1290
DrdI	GACNNNNNNGTC	1 cut(s)	1664
DseDI	GACNNNNNNGTC	1 cut(s)	1664
EaeI	YGGCCR	1 cut(s)	543
Eam1104I	CTCTTC	2 cut(s)	46, 61
EarI	CTCTTC	2 cut(s)	46, 61
EciI	GGCGGA	2 cut(s)	208, 476
Eco130I	CCWWGG	2 cut(s)	21, 738
Eco147I	AGGCCT	2 cut(s)	1845, 2120
Eco47I	GGWCC	3 cut(s)	433, 1304, 1543
Eco47III	AGCGCT	1 cut(s)	698
Eco57I	CTGAAG	3 cut(s)	1664, 1824, 1997
Eco81I	CCTNAGG	1 cut(s)	861
Eco88I	CYCGRG	1 cut(s)	1130
Eco91I	GGTNACC	1 cut(s)	1146
EcoNI	CCTNNNNNAGG	2 cut(s)	1028, 1976
EcoO109I	RGGNCCY	1 cut(s)	1543
EcoO65I	GGTNACC	1 cut(s)	1146
EcoRI	GAATTC	1 cut(s)	1957
EcoRII	CCWGG	7 cut(s)	408, 435, 561, 759, 1546, 1888, 2115
EcoT14I	CCWWGG	2 cut(s)	21, 738
EcoT22I	ATGCAT	3 cut(s)	167, 1460, 1522
ErhI	CCWWGG	2 cut(s)	21, 738
Esp3I	CGTCTC	2 cut(s)	286, 711
FaqI	GGGAC	3 cut(s)	280, 1465, 1529
FauI	CCCGC	1 cut(s)	360
FauNDI	CATATG	1 cut(s)	2026
FbaI	TGATCA	1 cut(s)	1027
FblI	GTMKAC	2 cut(s)	1170, 1607
FspBI	CTAG	4 cut(s)	606, 1622, 1730, 1899
FspI	TGCGCA	1 cut(s)	597
GlaI	GCGC	4 cut(s)	528, 570, 597, 698
GsuI	CTGGAG	3 cut(s)	440, 1569, 1911
HaeII	RGCGCY	2 cut(s)	572, 700
HapII	CCGG	6 cut(s)	388, 530, 591, 779, 1035, 2169
HgaI	GACGC	1 cut(s)	389
HhaI	GCGC	4 cut(s)	529, 571, 598, 699
Hin1I	GRCGYC	1 cut(s)	381
Hin6I	GCGC	4 cut(s)	527, 569, 596, 697
HinP1I	GCGC	4 cut(s)	527, 569, 596, 697
HindIII	AAGCTT	3 cut(s)	657, 1197, 2141
HpaII	CCGG	6 cut(s)	388, 530, 591, 779, 1035, 2169
HphI	GGTGA	5 cut(s)	472, 709, 1140, 1723, 1877
Hpy166II	GTNNAC	3 cut(s)	1171, 1608, 2090
Hpy188I	TCNGA	7 cut(s)	184, 286, 475, 919, 1006, 1415, 1807
Hpy8I	GTNNAC	3 cut(s)	1171, 1608, 2090
Hpy99I	CGWCG	3 cut(s)	383, 521, 560
HpyAV	CCTTC	5 cut(s)	82, 217, 1122, 1688, 1972
HpyCH4III	ACNGT	4 cut(s)	180, 317, 982, 1304
HpyCH4IV	ACGT	3 cut(s)	576, 617, 1293
HpyF3I	CTNAG	6 cut(s)	669, 789, 861, 1152, 1380, 1964
HpySE526I	ACGT	3 cut(s)	576, 617, 1293
Hsp92I	GRCGYC	1 cut(s)	381
HspAI	GCGC	4 cut(s)	527, 569, 596, 697
Kpn2I	TCCGGA	1 cut(s)	778
KroI	GCCGGC	1 cut(s)	1034
KroNI	GCCGGC	1 cut(s)	1036
Ksp22I	TGATCA	1 cut(s)	1027
LmnI	GCTCC	7 cut(s)	129, 221, 262, 273, 363, 1766, 1973
Lsp1109I	GCAGC	7 cut(s)	315, 316, 318, 386, 896, 1087, 2020
LweI	GCATC	8 cut(s)	174, 956, 1087, 1112, 1444, 1474, 1507, 1943
MaeI	CTAG	4 cut(s)	606, 1622, 1730, 1899
MaeII	ACGT	3 cut(s)	576, 617, 1293
MaeIII	GTNAC	3 cut(s)	1146, 1711, 2002
MbiI	CCGCTC	1 cut(s)	358
MfeI	CAATTG	1 cut(s)	1719
MflI	RGATCY	3 cut(s)	856, 1415, 2154
MluCI	AATT	9 cut(s)	1077, 1224, 1374, 1719, 1785, 1831, 1917, 1957, 2094
MlyI	GAGTC	4 cut(s)	14, 1304, 1400, 1802
MmeI	TCCRAC	1 cut(s)	151
Mph1103I	ATGCAT	3 cut(s)	167, 1460, 1522
MroI	TCCGGA	1 cut(s)	778
MroNI	GCCGGC	1 cut(s)	1034
MroXI	GAANNNNTTC	1 cut(s)	2094
MseI	TTAA	8 cut(s)	141, 612, 662, 807, 1176, 1289, 1848, 1857
MslI	CAYNNNNRTG	1 cut(s)	1952
MspI	CCGG	6 cut(s)	388, 530, 591, 779, 1035, 2169
MspR9I	CCNGG	9 cut(s)	389, 410, 437, 563, 591, 761, 1548, 1890, 2117
MunI	CAATTG	1 cut(s)	1719
Mva1269I	GAATGC	1 cut(s)	1141
MvaI	CCWGG	7 cut(s)	410, 437, 563, 761, 1548, 1890, 2117
MvnI	CGCG	2 cut(s)	458, 527
NaeI	GCCGGC	1 cut(s)	1036
NciI	CCSGG	2 cut(s)	389, 591
NcoI	CCATGG	1 cut(s)	21
NdeI	CATATG	1 cut(s)	2026
NgoMIV	GCCGGC	1 cut(s)	1034
NlaIV	GGNNCC	4 cut(s)	149, 523, 858, 1545
NmuCI	GTSAC	3 cut(s)	1146, 1711, 2002
NsbI	TGCGCA	1 cut(s)	597
NsiI	ATGCAT	3 cut(s)	167, 1460, 1522
NspI	RCATGY	2 cut(s)	1166, 1458
PaeR7I	CTCGAG	1 cut(s)	1130
PceI	AGGCCT	2 cut(s)	1845, 2120
PctI	GAATGC	1 cut(s)	1141
PdiI	GCCGGC	1 cut(s)	1036
PdmI	GAANNNNTTC	1 cut(s)	2094
PfeI	GAWTC	7 cut(s)	365, 470, 730, 920, 938, 1700, 2040
PflFI	GACNNNGTC	1 cut(s)	317
Ple19I	CGATCG	1 cut(s)	312
PleI	GAGTC	4 cut(s)	13, 1304, 1400, 1802
PpsI	GAGTC	4 cut(s)	13, 1304, 1400, 1802
Ppu21I	YACGTR	1 cut(s)	618
PpuMI	RGGWCCY	1 cut(s)	1543
PshBI	ATTAAT	1 cut(s)	1176
Psp1406I	AACGTT	1 cut(s)	576
Psp5II	RGGWCCY	1 cut(s)	1543
Psp6I	CCWGG	7 cut(s)	408, 435, 561, 759, 1546, 1888, 2115
PspEI	GGTNACC	1 cut(s)	1146
PspGI	CCWGG	7 cut(s)	408, 435, 561, 759, 1546, 1888, 2115
PspN4I	GGNNCC	4 cut(s)	149, 523, 858, 1545
PspPI	GGNCC	6 cut(s)	375, 406, 433, 522, 1304, 1543
PspPPI	RGGWCCY	1 cut(s)	1543
PstI	CTGCAG	2 cut(s)	886, 1266
PstNI	CAGNNNCTG	2 cut(s)	1100, 1703
PsuI	RGATCY	3 cut(s)	856, 1415, 2154
PsyI	GACNNNGTC	1 cut(s)	317
PvuI	CGATCG	1 cut(s)	312
RsaI	GTAC	3 cut(s)	1234, 1301, 1946
RsaNI	GTAC	3 cut(s)	1233, 1300, 1945
RseI	CAYNNNNRTG	1 cut(s)	1952
SaqAI	TTAA	8 cut(s)	141, 612, 662, 807, 1176, 1289, 1848, 1857
Sau96I	GGNCC	6 cut(s)	375, 406, 433, 522, 1304, 1543
SchI	GAGTC	4 cut(s)	14, 1304, 1400, 1802
ScrFI	CCNGG	9 cut(s)	389, 410, 437, 563, 591, 761, 1548, 1890, 2117
SfaNI	GCATC	8 cut(s)	174, 956, 1087, 1112, 1444, 1474, 1507, 1943
SfcI	CTRYAG	3 cut(s)	674, 882, 1262
Sfr274I	CTCGAG	1 cut(s)	1130
SinI	GGWCC	3 cut(s)	433, 1304, 1543
SlaI	CTCGAG	1 cut(s)	1130
SmiMI	CAYNNNNRTG	1 cut(s)	1952
SmlI	CTYRAG	3 cut(s)	1130, 1275, 1343
SmoI	CTYRAG	3 cut(s)	1130, 1275, 1343
SpeI	ACTAGT	1 cut(s)	1729
Sse9I	AATT	9 cut(s)	1077, 1224, 1374, 1719, 1785, 1831, 1917, 1957, 2094
SseBI	AGGCCT	2 cut(s)	1845, 2120
SspI	AATATT	1 cut(s)	1330
SspMI	CTAG	4 cut(s)	606, 1622, 1730, 1899
StuI	AGGCCT	2 cut(s)	1845, 2120
StyD4I	CCNGG	9 cut(s)	387, 408, 435, 561, 589, 759, 1546, 1888, 2115
StyI	CCWWGG	2 cut(s)	21, 738
TaaI	ACNGT	4 cut(s)	180, 317, 982, 1304
TaiI	ACGT	3 cut(s)	579, 620, 1296
TaqI	TCGA	5 cut(s)	312, 516, 693, 1131, 1539
TaqII	GACCGA	1 cut(s)	569
TasI	AATT	9 cut(s)	1077, 1224, 1374, 1719, 1785, 1831, 1917, 1957, 2094
TatI	WGTACW	1 cut(s)	1232
TauI	GCSGC	8 cut(s)	224, 328, 358, 444, 461, 527, 569, 688
TfiI	GAWTC	7 cut(s)	365, 470, 730, 920, 938, 1700, 2040
Tru1I	TTAA	8 cut(s)	141, 612, 662, 807, 1176, 1289, 1848, 1857
Tru9I	TTAA	8 cut(s)	141, 612, 662, 807, 1176, 1289, 1848, 1857
TscAI	CASTG	1 cut(s)	1191
TseFI	GTSAC	3 cut(s)	1146, 1711, 2002
TseI	GCWGC	7 cut(s)	304, 328, 331, 399, 884, 1100, 2033
Tsp45I	GTSAC	3 cut(s)	1146, 1711, 2002
TspGWI	ACGGA	3 cut(s)	499, 1932, 2154
TspRI	CASTG	1 cut(s)	1191
Tth111I	GACNNNGTC	1 cut(s)	317
VpaK11BI	GGWCC	3 cut(s)	433, 1304, 1543
VspI	ATTAAT	1 cut(s)	1176
XagI	CCTNNNNNAGG	2 cut(s)	1028, 1976
XapI	RAATTY	1 cut(s)	1957
XbaI	TCTAGA	1 cut(s)	1621
XceI	RCATGY	2 cut(s)	1166, 1458
XcmI	CCANNNNNNNNNTGG	1 cut(s)	391
XhoI	CTCGAG	1 cut(s)	1130
XmiI	GTMKAC	2 cut(s)	1170, 1607
XmnI	GAANNNNTTC	1 cut(s)	2094
XspI	CTAG	4 cut(s)	606, 1622, 1730, 1899
Zsp2I	ATGCAT	3 cut(s)	167, 1460, 1522

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.