Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr14

Orthogroup ID

OG0013570

Physical Location & Seq

Genomic Coordinates Forward (+)

26452860 .. 26456749

Gene Structure 3890 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD14G1170100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2232 bp

ATGGATGCTTCTTCTGCAACAACCATGGCGCTGAGAGTCTCCTCCTCTTCCTCCTCCTCATCGTCCTCCGCTTCTTTCAAGCCCAACAAGTCACTCCCTTTCAAGTTCACCACTTTCCGGCCTCCTCCCCAGCCCACCCTCTTCAAATCCCTCAAATGCATCCAAACGCCGCCGTCTTCCAATCCCAACCCATTAAAGCATCCGCCGCCGCCTCCCCAAAACCCTATCTCCGCCTCCCCCTTCTCCTGCTCCGCCCTCACCCTCTCACCCTCCACCTCGTCCCAAACAGCCGAGCTCGTCCCTTTAAAGCTCCAAACTTTGATCTCCGAGTTCCAATCTCTAGCCGAGCCGATCGATAGAGTTAAACGCTTGTTGCACTACGCGGCTCTCCTCCCACCGTTTGATGATTCGGCTCGGGTCGATTCCAACCGGGTCATGGGCTGCACGGCCCGGGTGTGGCTGCAGGCCGATATGGACGAGGAGGGCAAGATGAGATTCGCGGCGGACAGCGATTCCGAGATCACCAGGGGGTTCTGCTCGTGCCTGGTTTCGGTGCTCGACGGCGCATCGCCGGAGGAGGTGTTGGGGGTCAAGACCGACGACTTGTCGTCGCTCAATGTGGGATTGTCGGGCGCGCAGAGGTCTAGGGTTAACACGTGGCATAATGTGCTGGTCACTATGCAGAAAAAGACTAAGGCTTTGGTCGCCCAGCGGCATGGTACGCCGCCGTTCGAGCCTTTCCCGTCGCTCGTCGTCACCGCCGATGGGATTCAGGCAAAGGGCAGCTTCGCTGAGGCCCAGGCGAGGTACTTGTTTCCCAATGAATCGAAGGTTGAGGAACTTATTAATGTGTTGAAGGAAAAGAAAATTGGGGTTGTTGCACATTTTTACATGGACCCAGAGGTTCAAGGTATTTTAACTGCTGCACAGAAACATTGGCCTCACATCCATATATCTGATTCATTGGTCATGGCGGATTCCGCTGTGAATATGGCGAAAGCTGGTTGCGAATACATTACAGTGTTGGGTGTTGATTTTATGTCGGAAAATGTCCGGGCTATACTTGATCAGGCTGGCTTTGAAAAGGTTGGTGTGTACAGGATGTCAAATGAACGTATTGGTTGTTCATTGGCAGATGCTGCATCTAGTCCTTCGTACATGAGCTATCTTGAGGCAGCTTCTAGGTCTCCACATTCGTTGCATGTTGTCTACATTAATACTTCTCTAGAAACAAAAGCATATGCTCATGAGGTTGTGCCAACAATTACGTGCACATCTTCAAATGTTGTCCAAACCATTTTGCAGGCTTTTGTTCAAGTGCCAGATGCAAACATATGGTACGGACCTGATTCCTACATGGGTGCAAATATTAGAGAATTACTCCAGCAGATGACTAAGATGACTAATGAAGAAATTGCTGAGATACATCCAGAACATAATAGAGACACAATCGGATCTTTGCTACCTCGCCTACATTATTTTCAGGAGGGGACATGCATAGTGCATCATTTATTTGGAAATGAAGTTGTCGACAGGATAAAAGAAATGTACTGTGATGCATATCTAACTGCCCATTTTGAGGTCCCAGGAGAGATGTTCTCATTGGCAATGGAAGCAAAGAGAAGAGGAATGGGGGTTGTGGGTTCTACCCAGAACATACTAGATTTCATAAAACAGAGGATTCAAGAGGCTTTGGATAGAAATGTCAGTGAGCACCTTAAGTTTGTGTTAGGAACGGAATCCGGAATGGTGACTTCAATTGTTGCAGCAGTTCGTAGTTTGTTAGGTTCTGCAAGATCTGGAGGAGCAGAAATTAATGTAGAAATTGTATTTCCAGTTTCATCAGATTCAGTGACAACATCAAGTTCTTCCCCAGGCCTTAACTCTGTAAAACTAGGCGATGTCATACTACCTGTTATACCTGGAGTTTCCAGTGGGGAGGGATGTTCCATCAATGGCGGCTGTGCATCCTGCCCATACATGAAGATGAATTCTCTCACCTCCCTCCTGAAAGTTTGCCACCACCTGCCTGCCGGGACAAATAATACCCTTTCCGCATATGAGGCCAGCCGATTCAAACTTCAAACTCCCAATGGGAAGTCAGTAGCGGATGTTGGGTGCGAACCAATACTGCACATGAGGCACTTCCAGGCCTCTAAAAAGCTGCCGGAGAAGCTTATTTCCCAGATCATTCATCGGTCTGGTGACGGAAACTCAGTGTTGTTAAATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006091 GO:0006139 GO:0006520 GO:0006531 GO:0006725 GO:0006732 GO:0006733 GO:0006753 GO:0006790 GO:0006793 GO:0006796 GO:0006807 GO:0008047 GO:0008150 GO:0008152 GO:0008987 GO:0009058 GO:0009060 GO:0009066 GO:0009108 GO:0009117 GO:0009165 GO:0009435 GO:0009507 GO:0009536 GO:0009893 GO:0009987 GO:0015980 GO:0016043 GO:0016053 GO:0016226 GO:0017144 GO:0018130 GO:0019222 GO:0019355 GO:0019359 GO:0019362 GO:0019363 GO:0019438 GO:0019637 GO:0019674 GO:0019752 GO:0019805 GO:0022607 GO:0030234 GO:0031163 GO:0031323 GO:0031325 GO:0034627 GO:0034628 GO:0034641 GO:0034654 GO:0042762 GO:0042802 GO:0042803 GO:0043085 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043648 GO:0043650 GO:0044085 GO:0044093 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0045333 GO:0046394 GO:0046483 GO:0046496 GO:0046874 GO:0046983 GO:0048037 GO:0048518 GO:0048522 GO:0050789 GO:0050790 GO:0050794 GO:0051176 GO:0051186 GO:0051188 GO:0051536 GO:0051539 GO:0051540 GO:0055086 GO:0055114 GO:0065007 GO:0065009 GO:0071704 GO:0071840 GO:0072524 GO:0072525 GO:0090407 GO:0098772 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901605

KEGG Pathways

Metabolic & Signaling

ko00760 ko01100 map00760 map01100

Pfam Domains

Protein Families

NadA SufE

Protein Analysis

744

Amino Acids

80.63

Weight (kDa)

6.38

Isoelectric Point (pI)

54.27

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SufE	PF02657	109 - 229	1.2e-29	Fe-S metabolism associated domain
NadA	PF02445	282 - 588	6.9e-32	Quinolinate synthetase A protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0013570)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G50210
fragaria_vesca	FvH4_5g06430 FvH4_5g06430 FvH4_5g06430 FvH4_5g06430
malus_domestica	MD06G1164800.v1.1 MD14G1170100.v1.1
prunus_persica	Prupe.5G164300_v2.0.a1
pyrus_communis	pycom06g14740
rosa_chinensis	RchiOBHm_Chr7g0192351
rosa_laevigata	RLG00000004377
rosa_multiflora	Rmu_sc0003108.1_g000001
rosa_roxburghii	Rroxscaffold_3G00263110
rosa_rugosa	Rorug07G0000600
rosa_samantha	Rh7BG126800 Rh7CG128400 Rh7DG128400
rosa_wichuraiana	Rw7G010710

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2034
Acc36I	ACCTGC	1 cut(s)	2034
AccI	GTMKAC	2 cut(s)	1209, 1530
AccII	CGCG	3 cut(s)	383, 500, 635
AccIII	TCCGGA	1 cut(s)	1742
AclWI	GGATC	1 cut(s)	1462
AcsI	RAATTY	1 cut(s)	1990
AcvI	CACGTG	1 cut(s)	657
AfaI	GTAC	6 cut(s)	721, 809, 1097, 1157, 1340, 1550
AfiI	CCNNNNNNNGG	7 cut(s)	117, 436, 456, 550, 765, 804, 1579
AflII	CTTAAG	1 cut(s)	1718
AflIII	ACRYGT	1 cut(s)	654
AhdI	GACNNNNNGTC	2 cut(s)	604, 607
AjnI	CCWGG	7 cut(s)	524, 543, 798, 1585, 1873, 1921, 2148
AjuI	GAANNNNNNNTTGG	2 cut(s)	852, 884
AluBI	AGCT	8 cut(s)	295, 310, 786, 1001, 1164, 1178, 2164, 2176
AluI	AGCT	8 cut(s)	295, 310, 786, 1001, 1164, 1178, 2164, 2176
Alw21I	GWGCWC	4 cut(s)	297, 558, 1274, 1716
Alw26I	GTCTC	3 cut(s)	43, 1191, 1437
Alw44I	GTGCAC	1 cut(s)	1270
AlwI	GGATC	1 cut(s)	1462
AlwNI	CAGNNNCTG	1 cut(s)	1139
Ama87I	CYCGRG	2 cut(s)	414, 450
Aor13HI	TCCGGA	1 cut(s)	1742
AoxI	GGCC	8 cut(s)	119, 447, 465, 795, 938, 1876, 2064, 2151
ApaLI	GTGCAC	1 cut(s)	1270
ApeKI	GCWGC	8 cut(s)	441, 460, 783, 923, 1139, 1175, 1766, 2164
ApoI	RAATTY	1 cut(s)	1990
ArsI	GACNNNNNNTTYG	2 cut(s)	682, 714
AseI	ATTAAT	3 cut(s)	846, 1215, 1815
AspLEI	GCGC	4 cut(s)	31, 566, 635, 637
AspS9I	GGNCC	5 cut(s)	448, 796, 895, 1343, 1582
AsuC2I	CCSGG	5 cut(s)	431, 451, 452, 1055, 2035
AsuHPI	GGTGA	8 cut(s)	100, 250, 258, 514, 748, 1762, 1990, 2216
AvaI	CYCGRG	2 cut(s)	414, 450
AvaII	GGWCC	3 cut(s)	895, 1343, 1582
BaeGI	GKGCMC	1 cut(s)	1274
BanII	GRGCYC	1 cut(s)	297
BauI	CACGAG	1 cut(s)	538
BbrPI	CACGTG	1 cut(s)	657
BbsI	GAAGAC	1 cut(s)	168
Bbv12I	GWGCWC	4 cut(s)	297, 558, 1274, 1716
BbvCI	CCTCAGC	1 cut(s)	792
BbvI	GCAGC	8 cut(s)	428, 447, 795, 910, 1126, 1187, 1778, 2151
BccI	CCATC	2 cut(s)	758, 1958
BceAI	ACGGC	4 cut(s)	157, 462, 577, 712
BciT130I	CCWGG	7 cut(s)	526, 545, 800, 1587, 1875, 1923, 2150
BclI	TGATCA	1 cut(s)	1066
BcnI	CCSGG	5 cut(s)	431, 451, 452, 1055, 2035
BcoDI	GTCTC	3 cut(s)	43, 1191, 1437
BfaI	CTAG	7 cut(s)	341, 645, 1146, 1182, 1226, 1661, 1895
BfmI	CTRYAG	1 cut(s)	461
BfoI	RGCGCY	1 cut(s)	32
BfrI	CTTAAG	1 cut(s)	1718
BfuAI	ACCTGC	1 cut(s)	2034
BglII	AGATCT	1 cut(s)	1796
Bme18I	GGWCC	3 cut(s)	895, 1343, 1582
BmeRI	GACNNNNNGTC	2 cut(s)	604, 607
BmeT110I	CYCGRG	2 cut(s)	414, 450
BmgT120I	GGNCC	5 cut(s)	448, 796, 895, 1343, 1582
BmiI	GGNNCC	2 cut(s)	897, 1584
BmsI	GCATC	9 cut(s)	168, 208, 575, 1126, 1151, 1315, 1513, 1546, 1976
BpiI	GAAGAC	1 cut(s)	168
BplI	GAGNNNNNCTC	4 cut(s)	1365, 1397, 1583, 1615
BpmI	CTGGAG	3 cut(s)	1367, 1821, 1944
Bpu10I	CCTNAGC	1 cut(s)	792
BpuEI	CTTGAG	1 cut(s)	1190
BpuMI	CCSGG	5 cut(s)	431, 451, 452, 1055, 2035
Bsa29I	ATCGAT	1 cut(s)	354
BsaAI	YACGTR	2 cut(s)	657, 1269
BsaBI	GATNNNNATC	1 cut(s)	1560
BsaI	GGTCTC	1 cut(s)	1191
BsaJI	CCNNGG	6 cut(s)	24, 450, 525, 798, 1585, 1873
BsaWI	WCCGGW	1 cut(s)	1742
BsaXI	ACNNNNNCTCC	4 cut(s)	212, 242, 566, 596
Bsc4I	CCNNNNNNNGG	7 cut(s)	117, 436, 456, 550, 765, 804, 1579
Bse1I	ACTGG	2 cut(s)	1835, 1932
Bse3DI	GCAATG	1 cut(s)	1614
Bse8I	GATNNNNATC	1 cut(s)	1560
BseAI	TCCGGA	1 cut(s)	1742
BseBI	CCWGG	7 cut(s)	526, 545, 800, 1587, 1875, 1923, 2150
BseCI	ATCGAT	1 cut(s)	354
BseDI	CCNNGG	6 cut(s)	24, 450, 525, 798, 1585, 1873
BseGI	GGATG	9 cut(s)	10, 159, 199, 945, 1107, 1426, 1949, 1967, 2116
BseJI	GATNNNNATC	1 cut(s)	1560
BseLI	CCNNNNNNNGG	7 cut(s)	117, 436, 456, 550, 765, 804, 1579
BseMI	GCAATG	1 cut(s)	1614
BseMII	CTCAG	4 cut(s)	23, 783, 1410, 2229
BseNI	ACTGG	2 cut(s)	1835, 1932
BsePI	GCGCGC	1 cut(s)	633
BseRI	GAGGAG	9 cut(s)	31, 34, 43, 46, 114, 380, 494, 590, 1818
BseSI	GKGCMC	1 cut(s)	1274
BseXI	GCAGC	8 cut(s)	428, 447, 795, 910, 1126, 1187, 1778, 2151
BseYI	CCCAGC	2 cut(s)	129, 708
BsgI	GTGCAG	3 cut(s)	427, 909, 2117
Bsh1236I	CGCG	3 cut(s)	383, 500, 635
Bsh1285I	CGRYCG	1 cut(s)	354
BshFI	GGCC	8 cut(s)	121, 449, 467, 797, 940, 1878, 2066, 2153
BshVI	ATCGAT	1 cut(s)	354
BsiEI	CGRYCG	1 cut(s)	354
BsiHKAI	GWGCWC	4 cut(s)	297, 558, 1274, 1716
BsiHKCI	CYCGRG	2 cut(s)	414, 450
BsiSI	CCGG	8 cut(s)	118, 430, 451, 572, 1054, 1743, 2034, 2168
BslFI	GGGAC	5 cut(s)	265, 284, 1504, 1568, 2050
BslI	CCNNNNNNNGG	7 cut(s)	117, 436, 456, 550, 765, 804, 1579
BsmAI	GTCTC	3 cut(s)	43, 1191, 1437
BsmFI	GGGAC	5 cut(s)	265, 284, 1504, 1568, 2050
BsnI	GGCC	8 cut(s)	121, 449, 467, 797, 940, 1878, 2066, 2153
Bso31I	GGTCTC	1 cut(s)	1191
BsoBI	CYCGRG	2 cut(s)	414, 450
Bsp1286I	GDGCHC	4 cut(s)	297, 558, 1274, 1716
Bsp13I	TCCGGA	1 cut(s)	1742
Bsp1407I	TGTACA	1 cut(s)	1095
Bsp143I	GATC	7 cut(s)	321, 351, 519, 1066, 1454, 1796, 2187
Bsp19I	CCATGG	1 cut(s)	24
BspANI	GGCC	8 cut(s)	121, 449, 467, 797, 940, 1878, 2066, 2153
BspCNI	CTCAG	4 cut(s)	24, 784, 1411, 2228
BspDI	ATCGAT	1 cut(s)	354
BspEI	TCCGGA	1 cut(s)	1742
BspFNI	CGCG	3 cut(s)	383, 500, 635
BspHI	TCATGA	1 cut(s)	1246
BspLI	GGNNCC	2 cut(s)	897, 1584
BspMAI	CTGCAG	1 cut(s)	465
BspMI	ACCTGC	1 cut(s)	2034
BspPI	GGATC	1 cut(s)	1462
BspTI	CTTAAG	1 cut(s)	1718
BspTNI	GGTCTC	1 cut(s)	1191
BsrDI	GCAATG	1 cut(s)	1614
BsrGI	TGTACA	1 cut(s)	1095
BsrI	ACTGG	2 cut(s)	1835, 1932
BssECI	CCNNGG	6 cut(s)	24, 450, 525, 798, 1585, 1873
BssHII	GCGCGC	1 cut(s)	633
BssMI	GATC	7 cut(s)	321, 351, 519, 1066, 1454, 1796, 2187
BssSI	CACGAG	1 cut(s)	538
BssT1I	CCWWGG	1 cut(s)	24
Bst2BI	CACGAG	1 cut(s)	538
Bst2UI	CCWGG	7 cut(s)	526, 545, 800, 1587, 1875, 1923, 2150
Bst4CI	ACNGT	3 cut(s)	399, 1021, 1553
Bst6I	CTCTTC	3 cut(s)	52, 146, 1618
BstAFI	CTTAAG	1 cut(s)	1718
BstAPI	GCANNNNNTGC	2 cut(s)	667, 1139
BstAUI	TGTACA	1 cut(s)	1095
BstBAI	YACGTR	2 cut(s)	657, 1269
BstC8I	GCNNGC	6 cut(s)	465, 635, 1075, 1305, 2031, 2068
BstDEI	CTNAG	6 cut(s)	32, 693, 792, 1395, 1419, 2215
BstDSI	CCRYGG	1 cut(s)	24
BstF5I	GGATG	9 cut(s)	10, 159, 199, 945, 1107, 1426, 1949, 1967, 2116
BstFNI	CGCG	3 cut(s)	383, 500, 635
BstH2I	RGCGCY	1 cut(s)	32
BstHHI	GCGC	4 cut(s)	31, 566, 635, 637
BstKTI	GATC	7 cut(s)	324, 354, 522, 1069, 1457, 1799, 2190
BstMAI	GTCTC	3 cut(s)	43, 1191, 1437
BstMBI	GATC	7 cut(s)	321, 351, 519, 1066, 1454, 1796, 2187
BstMCI	CGRYCG	1 cut(s)	354
BstNI	CCWGG	7 cut(s)	526, 545, 800, 1587, 1875, 1923, 2150
BstNSI	RCATGY	2 cut(s)	1205, 1497
BstSFI	CTRYAG	1 cut(s)	461
BstSLI	GKGCMC	1 cut(s)	1274
BstUI	CGCG	3 cut(s)	383, 500, 635
BstV1I	GCAGC	8 cut(s)	428, 447, 795, 910, 1126, 1187, 1778, 2151
BstV2I	GAAGAC	1 cut(s)	168
BstX2I	RGATCY	2 cut(s)	1454, 1796
BstXI	CCANNNNNNTGG	1 cut(s)	716
BstYI	RGATCY	2 cut(s)	1454, 1796
Bsu15I	ATCGAT	1 cut(s)	354
BsuRI	GGCC	8 cut(s)	121, 449, 467, 797, 940, 1878, 2066, 2153
BsuTUI	ATCGAT	1 cut(s)	354
BtgI	CCRYGG	1 cut(s)	24
BtgZI	GCGATG	2 cut(s)	552, 1914
BtsCI	GGATG	9 cut(s)	10, 159, 199, 945, 1107, 1426, 1949, 1967, 2116
BtsIMutI	CAGTG	5 cut(s)	1026, 1714, 1857, 1939, 2223
BveI	ACCTGC	1 cut(s)	2034
Cac8I	GCNNGC	6 cut(s)	465, 635, 1075, 1305, 2031, 2068
CaiI	CAGNNNCTG	1 cut(s)	1139
CciI	TCATGA	1 cut(s)	1246
CfoI	GCGC	4 cut(s)	31, 566, 635, 637
Cfr13I	GGNCC	5 cut(s)	448, 796, 895, 1343, 1582
Cfr9I	CCCGGG	1 cut(s)	450
ClaI	ATCGAT	1 cut(s)	354
Csp6I	GTAC	6 cut(s)	720, 808, 1096, 1156, 1339, 1549
CspCI	CAANNNNNGTGG	2 cut(s)	1179, 1214
CviQI	GTAC	6 cut(s)	720, 808, 1096, 1156, 1339, 1549
DdeI	CTNAG	6 cut(s)	32, 693, 792, 1395, 1419, 2215
DpnI	GATC	7 cut(s)	323, 353, 521, 1068, 1456, 1798, 2189
DpnII	GATC	7 cut(s)	321, 351, 519, 1066, 1454, 1796, 2187
DraI	TTTAAA	1 cut(s)	306
DriI	GACNNNNNGTC	2 cut(s)	604, 607
Eam1104I	CTCTTC	3 cut(s)	52, 146, 1618
Eam1105I	GACNNNNNGTC	2 cut(s)	604, 607
EarI	CTCTTC	3 cut(s)	52, 146, 1618
EciI	GGCGGA	5 cut(s)	192, 220, 241, 518, 989
Ecl136II	GAGCTC	1 cut(s)	295
Eco130I	CCWWGG	1 cut(s)	24
Eco147I	AGGCCT	2 cut(s)	1878, 2153
Eco24I	GRGCYC	1 cut(s)	297
Eco31I	GGTCTC	1 cut(s)	1191
Eco47I	GGWCC	3 cut(s)	895, 1343, 1582
Eco53kI	GAGCTC	1 cut(s)	295
Eco72I	CACGTG	1 cut(s)	657
Eco88I	CYCGRG	2 cut(s)	414, 450
EcoICRI	GAGCTC	1 cut(s)	295
EcoO109I	RGGNCCY	1 cut(s)	1582
EcoRI	GAATTC	1 cut(s)	1990
EcoRII	CCWGG	7 cut(s)	524, 543, 798, 1585, 1873, 1921, 2148
EcoT14I	CCWWGG	1 cut(s)	24
EcoT22I	ATGCAT	3 cut(s)	161, 1499, 1561
EcoT38I	GRGCYC	1 cut(s)	297
ErhI	CCWWGG	1 cut(s)	24
FalI	AAGNNNNNCTT	2 cut(s)	770, 802
FaqI	GGGAC	5 cut(s)	265, 284, 1504, 1568, 2050
FauNDI	CATATG	3 cut(s)	1240, 1334, 2059
FbaI	TGATCA	1 cut(s)	1066
FblI	GTMKAC	2 cut(s)	1209, 1530
FokI	GGATG	9 cut(s)	17, 146, 186, 932, 1114, 1413, 1954, 1956, 2123
FriOI	GRGCYC	1 cut(s)	297
FspBI	CTAG	7 cut(s)	341, 645, 1146, 1182, 1226, 1661, 1895
GlaI	GCGC	4 cut(s)	30, 565, 634, 636
GsaI	CCCAGC	2 cut(s)	133, 712
GsuI	CTGGAG	3 cut(s)	1367, 1821, 1944
HaeII	RGCGCY	1 cut(s)	32
HaeIII	GGCC	8 cut(s)	121, 449, 467, 797, 940, 1878, 2066, 2153
HapII	CCGG	8 cut(s)	118, 430, 451, 572, 1054, 1743, 2034, 2168
HhaI	GCGC	4 cut(s)	31, 566, 635, 637
Hin6I	GCGC	4 cut(s)	29, 564, 633, 635
HinP1I	GCGC	4 cut(s)	29, 564, 633, 635
HincII	GTYRAC	2 cut(s)	652, 1531
HindII	GTYRAC	2 cut(s)	652, 1531
HindIII	AAGCTT	1 cut(s)	2174
HpaI	GTTAAC	1 cut(s)	652
HpaII	CCGG	8 cut(s)	118, 430, 451, 572, 1054, 1743, 2034, 2168
HphI	GGTGA	8 cut(s)	100, 250, 258, 514, 748, 1762, 1990, 2216
Hpy166II	GTNNAC	6 cut(s)	108, 652, 1096, 1210, 1272, 1531
Hpy188I	TCNGA	6 cut(s)	328, 517, 958, 1045, 1454, 1846
Hpy8I	GTNNAC	6 cut(s)	108, 652, 1096, 1210, 1272, 1531
Hpy99I	CGWCG	5 cut(s)	563, 602, 613, 748, 755
HpyAV	CCTTC	4 cut(s)	250, 823, 850, 1161
HpyCH4III	ACNGT	3 cut(s)	399, 1021, 1553
HpyCH4IV	ACGT	3 cut(s)	656, 1114, 1268
HpyF3I	CTNAG	6 cut(s)	32, 693, 792, 1395, 1419, 2215
HpySE526I	ACGT	3 cut(s)	656, 1114, 1268
HspAI	GCGC	4 cut(s)	29, 564, 633, 635
Kpn2I	TCCGGA	1 cut(s)	1742
Ksp22I	TGATCA	1 cut(s)	1066
KspAI	GTTAAC	1 cut(s)	652
Kzo9I	GATC	7 cut(s)	321, 351, 519, 1066, 1454, 1796, 2187
LmnI	GCTCC	3 cut(s)	254, 315, 1805
Lsp1109I	GCAGC	8 cut(s)	428, 447, 795, 910, 1126, 1187, 1778, 2151
LweI	GCATC	9 cut(s)	168, 208, 575, 1126, 1151, 1315, 1513, 1546, 1976
MaeI	CTAG	7 cut(s)	341, 645, 1146, 1182, 1226, 1661, 1895
MaeII	ACGT	3 cut(s)	656, 1114, 1268
MaeIII	GTNAC	6 cut(s)	90, 673, 754, 1750, 1852, 2204
MalI	GATC	7 cut(s)	323, 353, 521, 1068, 1456, 1798, 2189
MboI	GATC	7 cut(s)	321, 351, 519, 1066, 1454, 1796, 2187
MboII	GAAGA	9 cut(s)	3, 39, 133, 168, 1269, 1421, 1635, 1860, 1996
MfeI	CAATTG	1 cut(s)	1758
MflI	RGATCY	2 cut(s)	1454, 1796
MhlI	GDGCHC	4 cut(s)	297, 558, 1274, 1716
MluCI	AATT	9 cut(s)	867, 1263, 1376, 1413, 1758, 1812, 1824, 1990, 2227
MlyI	GAGTC	1 cut(s)	45
MmeI	TCCRAC	2 cut(s)	450, 1023
Mph1103I	ATGCAT	3 cut(s)	161, 1499, 1561
MroI	TCCGGA	1 cut(s)	1742
MslI	CAYNNNNRTG	2 cut(s)	1019, 1985
MspA1I	CMGCKG	2 cut(s)	712, 983
MspCI	CTTAAG	1 cut(s)	1718
MspI	CCGG	8 cut(s)	118, 430, 451, 572, 1054, 1743, 2034, 2168
MunI	CAATTG	1 cut(s)	1758
MvaI	CCWGG	7 cut(s)	526, 545, 800, 1587, 1875, 1923, 2150
MvnI	CGCG	3 cut(s)	383, 500, 635
NciI	CCSGG	5 cut(s)	431, 451, 452, 1055, 2035
NcoI	CCATGG	1 cut(s)	24
NdeI	CATATG	3 cut(s)	1240, 1334, 2059
NdeII	GATC	7 cut(s)	321, 351, 519, 1066, 1454, 1796, 2187
NlaIV	GGNNCC	2 cut(s)	897, 1584
NmeAIII	GCCGAG	2 cut(s)	316, 370
NmuCI	GTSAC	6 cut(s)	90, 673, 754, 1750, 1852, 2204
NsiI	ATGCAT	3 cut(s)	161, 1499, 1561
NspI	RCATGY	2 cut(s)	1205, 1497
PagI	TCATGA	1 cut(s)	1246
PaqCI	CACCTGC	1 cut(s)	2034
PauI	GCGCGC	1 cut(s)	633
PceI	AGGCCT	2 cut(s)	1878, 2153
PcsI	WCGNNNNNNNCGW	1 cut(s)	759
Ple19I	CGATCG	1 cut(s)	354
PleI	GAGTC	1 cut(s)	44
PmaCI	CACGTG	1 cut(s)	657
PmlI	CACGTG	1 cut(s)	657
PpsI	GAGTC	1 cut(s)	44
Ppu21I	YACGTR	2 cut(s)	657, 1269
PpuMI	RGGWCCY	1 cut(s)	1582
PshBI	ATTAAT	3 cut(s)	846, 1215, 1815
Psp124BI	GAGCTC	1 cut(s)	297
Psp5II	RGGWCCY	1 cut(s)	1582
Psp6I	CCWGG	7 cut(s)	524, 543, 798, 1585, 1873, 1921, 2148
PspCI	CACGTG	1 cut(s)	657
PspFI	CCCAGC	2 cut(s)	129, 708
PspGI	CCWGG	7 cut(s)	524, 543, 798, 1585, 1873, 1921, 2148
PspN4I	GGNNCC	2 cut(s)	897, 1584
PspPI	GGNCC	5 cut(s)	448, 796, 895, 1343, 1582
PspPPI	RGGWCCY	1 cut(s)	1582
PsrI	GAACNNNNNNTAC	2 cut(s)	1108, 1140
PstI	CTGCAG	1 cut(s)	465
PstNI	CAGNNNCTG	1 cut(s)	1139
PsuI	RGATCY	2 cut(s)	1454, 1796
PteI	GCGCGC	1 cut(s)	633
PvuI	CGATCG	1 cut(s)	354
RsaI	GTAC	6 cut(s)	721, 809, 1097, 1157, 1340, 1550
RsaNI	GTAC	6 cut(s)	720, 808, 1096, 1156, 1339, 1549
RseI	CAYNNNNRTG	2 cut(s)	1019, 1985
SacI	GAGCTC	1 cut(s)	297
SalI	GTCGAC	1 cut(s)	1529
Sau3AI	GATC	7 cut(s)	321, 351, 519, 1066, 1454, 1796, 2187
Sau96I	GGNCC	5 cut(s)	448, 796, 895, 1343, 1582
SchI	GAGTC	1 cut(s)	45
SduI	GDGCHC	4 cut(s)	297, 558, 1274, 1716
SfaNI	GCATC	9 cut(s)	168, 208, 575, 1126, 1151, 1315, 1513, 1546, 1976
SfcI	CTRYAG	1 cut(s)	461
SinI	GGWCC	3 cut(s)	895, 1343, 1582
SmaI	CCCGGG	1 cut(s)	452
SmiMI	CAYNNNNRTG	2 cut(s)	1019, 1985
SmlI	CTYRAG	2 cut(s)	1169, 1718
SmoI	CTYRAG	2 cut(s)	1169, 1718
Sse9I	AATT	9 cut(s)	867, 1263, 1376, 1413, 1758, 1812, 1824, 1990, 2227
SseBI	AGGCCT	2 cut(s)	1878, 2153
SspI	AATATT	1 cut(s)	1369
SspMI	CTAG	7 cut(s)	341, 645, 1146, 1182, 1226, 1661, 1895
SstI	GAGCTC	1 cut(s)	297
StuI	AGGCCT	2 cut(s)	1878, 2153
StyI	CCWWGG	1 cut(s)	24
TaaI	ACNGT	3 cut(s)	399, 1021, 1553
TaiI	ACGT	3 cut(s)	659, 1117, 1271
TaqI	TCGA	6 cut(s)	354, 420, 558, 732, 827, 1530
TaqII	GACCGA	2 cut(s)	611, 2187
TasI	AATT	9 cut(s)	867, 1263, 1376, 1413, 1758, 1812, 1824, 1990, 2227
TatI	WGTACW	2 cut(s)	1095, 1548
TauI	GCSGC	8 cut(s)	172, 208, 211, 386, 503, 715, 727, 1962
TscAI	CASTG	5 cut(s)	1026, 1714, 1857, 1939, 2223
TseFI	GTSAC	6 cut(s)	90, 673, 754, 1750, 1852, 2204
TseI	GCWGC	8 cut(s)	441, 460, 783, 923, 1139, 1175, 1766, 2164
Tsp45I	GTSAC	6 cut(s)	90, 673, 754, 1750, 1852, 2204
TspGWI	ACGGA	3 cut(s)	1356, 1751, 2223
TspMI	CCCGGG	1 cut(s)	450
TspRI	CASTG	5 cut(s)	1026, 1714, 1857, 1939, 2223
Vha464I	CTTAAG	1 cut(s)	1718
VneI	GTGCAC	1 cut(s)	1270
VpaK11BI	GGWCC	3 cut(s)	895, 1343, 1582
VspI	ATTAAT	3 cut(s)	846, 1215, 1815
XapI	RAATTY	1 cut(s)	1990
XbaI	TCTAGA	1 cut(s)	1225
XceI	RCATGY	2 cut(s)	1205, 1497
XcmI	CCANNNNNNNNNTGG	1 cut(s)	433
XmaI	CCCGGG	1 cut(s)	450
XmiI	GTMKAC	2 cut(s)	1209, 1530
XspI	CTAG	7 cut(s)	341, 645, 1146, 1182, 1226, 1661, 1895
Zsp2I	ATGCAT	3 cut(s)	161, 1499, 1561

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.