Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr06

Orthogroup ID

OG0013570

Physical Location & Seq

Genomic Coordinates Forward (+)

30512243 .. 30516665

Gene Structure 4423 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD06G1164800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2586 bp

ATGAGTTCCCTTCCCCACTCCAGAATTGTCGTCCATGGAGATGTTGTGGGCCCAACATTTCGAAAGGATGGGCTGCTATGTCCTATTATTTATCCTTATTTTAATAAATTGGCGCGTAGTTTCATATATATTGGTAGTAACTTGCTGCGTTCTTGCCTTCTTGGACCTTGGTTGCCTAAATTCCCCTTTTCACTTAAATTTTCAATTTTATGGCAAACTTCATTGGAGCAGCAAAATCCATTTAAAGCCTCTGGTTTCTGCCCCTCTGCCTCCACCACTCAATCAAAGCCTCCACCTTTAGGCTTTAACCCCTCCTCTCACACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTTCCCTTCCCAATGGATGCTTCCTCTGCAACAACCATGGCGCTCAGAGTCTCCTCCTCCTCTTCCTCCTCCTCCTCCTCCGCTTCTTTCAAGCCCAACAAGTCACTCCCTTTCAAGTTCAGCACTTTCCGGCCACCTCCCCAGTCCACACCCTTCAAATCCCTCAAATACATCCAAACGCCGCCATCTTCCAATCCCAACCCATTAAAGCATCCGCCGCCGCCTCCCCAAAACCCTGGCTCAGCCTCCCCCTTCTCCTGCTCCGCCCTCACCCTCTCCTCCCAAACCTCCGAGCTAGTCCCCTTGAAGCTCCAAACTTTGATCTCCGAGTTCCAATCTCTCCCTGAGCCGATCGACAGAGTTAAACGCCTGTTGCACTACGCGGCTCTCCTCCCTCCGTTTGATGATTCGGGTCGGGTTGATTCGAACCGGGTCATGGGCTGCACGGCCCAGGTGTGGCTGCAGGCCGAGATGGACGAGGAGGGCAAGATGAGATTCGTGGCTGACAGCGATTCCGAGATCACCAGGGGCTTCTGCTCCTGCCTGGTTTCGGTGCTCGACGGCACGTCGCCGGAGGAGGTGTTGCGGGTCAAGACCGACGACTTGTCGTCACTCAATGTGGGATTGCCGGGCGCGCAGAGGTCTAGGATTAACACGTGGCATAATGTGCTGGTCAGTATGCAGAAAAAGACTAAGGCTTTGGTAGCCCAGCGGCAGGGTACGCCGCCGTTCGAGCCTTTCCCGTCGCTCGTCGTCACCGCCGAGGGCATTCAGGCAAAAGGCAGCTTCGCTGAGGCCCAGGCGAGGTACTTGTCTCCTGATGAATCGAAGGTTGTGGAACTTGTTAATGTGTTGAAGGAAAAGAAAATTGGGGTTGTTGCACATTTTTACATGGACCCAGAGGTTCAAGGTATTCTAACTGCTGCACAGAAACATTGGCCTCACATCCATATATCTGATTCTTTAGTCATGGCGGATTCCGCTGTGAACATGGCGAAAGCTGGTTGCCAATACATTACAGTCTTGGGTGTTGATTTTATGTCGGAAAATGTCCGAGCTATACTTGATCAGGCTGGATTTGAAAAGGTTGGTGTGTACAGGATGTCAAATGAACGAATTGGATGTTCTTTGGCAGATGCTGCATCTAGCCCTTCGTATATGGGCTATCTTGAGGCAGCTTCTAGGTCTCCTCATTCGTTGCATGTTGTGTACATTAATACTTCTCTAGAGACAAAAGCATACGCCCATGAGATTGTGCCAACAATTACGTGTACATCTTCAAATGTTGTCCAAACCATTTTGCAGGCTTTTGTTCAAGTTCCAGATGCAAACATATGGTACGGGCCTGATTCTTACATGGGTGCAAATATTCGAGAATTACTTCACCAGATGACTAAGATGACTGATGAAGAAATTGCTGAGATACATCCAAAACATAACAGAGACTCAATCATATCTTTGCTACCTCGCCTTCATTATTTTCTGGATGGGACATGCATAGTACACCATTTATTTGGAAATGAAGTTGTCGACAGGATAAAAGAAATGTACTGTGACGCTTATCTAACTGCTCATTTTGAGGTCCCTGGAGAAATGTTTTCTTTGGCAATGGAAGCAAAGAGAAGAGGAATGGGGGTTGTGGGTTCTACCCAGAACATACTAGATTTCATAAAACAGAGGATTCAAGAGGCTTTGGATAGAAATGTCAATGAGCACCTTCAGTTTGTGTTAGGAACAGAATCCGGAATGGTGACTTCAATTGTAGCAGCAGTTCGTAGTTTGTTAGGTTCTGCGAGGTCTGGAGGAGCAGAAATTAATGTAGAAATTGTATTTCCAGTTTCATCAGACTCAATGACAACGTCAAGTTCTTCCCCGGGCCTTGACTCTGTAAAAGTAGGTGATGTCATACTACCTGTCATACCTGGAGTTTCCAGTGGGGAGGGATGTTCCATCAACGGCGGCTGTGCATCCTGTCCATACATGAAGATGAATTCTCTCGCCTCCCTCCTGAAAGTTTGCCACCACCTGCCCGATGAGATAAATAATACCCTTTCCGCATATGAAGCGGGCCGTTTCAAACTGCAAACTCCGAATGGAAAGTCAGTTGCGGATGTTGGGTGCGAACCAATACTGCACATGAGGCACTTCCAGGCCTCTAAAAAGCTGCCGGAGAAGCTTATTTCCCAGATCATTCATCCGTCTGGTGACGGAAACTCGGTGCTGTTAAATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006091 GO:0006139 GO:0006520 GO:0006531 GO:0006725 GO:0006732 GO:0006733 GO:0006753 GO:0006790 GO:0006793 GO:0006796 GO:0006807 GO:0008047 GO:0008150 GO:0008152 GO:0008987 GO:0009058 GO:0009060 GO:0009066 GO:0009108 GO:0009117 GO:0009165 GO:0009435 GO:0009507 GO:0009536 GO:0009893 GO:0009987 GO:0015980 GO:0016043 GO:0016053 GO:0016226 GO:0017144 GO:0018130 GO:0019222 GO:0019355 GO:0019359 GO:0019362 GO:0019363 GO:0019438 GO:0019637 GO:0019674 GO:0019752 GO:0019805 GO:0022607 GO:0030234 GO:0031163 GO:0031323 GO:0031325 GO:0034627 GO:0034628 GO:0034641 GO:0034654 GO:0042762 GO:0042802 GO:0042803 GO:0043085 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043648 GO:0043650 GO:0044085 GO:0044093 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0045333 GO:0046394 GO:0046483 GO:0046496 GO:0046874 GO:0046983 GO:0048037 GO:0048518 GO:0048522 GO:0050789 GO:0050790 GO:0050794 GO:0051176 GO:0051186 GO:0051188 GO:0051536 GO:0051539 GO:0051540 GO:0055086 GO:0055114 GO:0065007 GO:0065009 GO:0071704 GO:0071840 GO:0072524 GO:0072525 GO:0090407 GO:0098772 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901605

KEGG Pathways

Metabolic & Signaling

ko00760 ko01100 map00760 map01100

Pfam Domains

Protein Families

NadA SufE

Protein Analysis

862

Amino Acids

93.85

Weight (kDa)

6.82

Isoelectric Point (pI)

55.37

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SufE	PF02657	227 - 347	6e-29	Fe-S metabolism associated domain
NadA	PF02445	401 - 706	4.5e-31	Quinolinate synthetase A protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0013570)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G50210
fragaria_vesca	FvH4_5g06430 FvH4_5g06430 FvH4_5g06430 FvH4_5g06430
malus_domestica	MD06G1164800.v1.1 MD14G1170100.v1.1
prunus_persica	Prupe.5G164300_v2.0.a1
pyrus_communis	pycom06g14740
rosa_chinensis	RchiOBHm_Chr7g0192351
rosa_laevigata	RLG00000004377
rosa_multiflora	Rmu_sc0003108.1_g000001
rosa_roxburghii	Rroxscaffold_3G00263110
rosa_rugosa	Rorug07G0000600
rosa_samantha	Rh7BG126800 Rh7CG128400 Rh7DG128400
rosa_wichuraiana	Rw7G010710

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2388
Acc36I	ACCTGC	1 cut(s)	2388
AccI	GTMKAC	1 cut(s)	1884
AccII	CGCG	3 cut(s)	115, 737, 989
AccIII	TCCGGA	1 cut(s)	2096
AcoI	YGGCCR	1 cut(s)	485
AcsI	RAATTY	3 cut(s)	179, 197, 2344
AcuI	CTGAAG	1 cut(s)	2057
AcvI	CACGTG	1 cut(s)	1011
AfaI	GTAC	8 cut(s)	1075, 1163, 1451, 1565, 1627, 1694, 1857, 1904
AfiI	CCNNNNNNNGG	6 cut(s)	299, 790, 810, 904, 1069, 1158
AflIII	ACRYGT	2 cut(s)	1008, 1622
AhdI	GACNNNNNGTC	3 cut(s)	919, 958, 961
AjiI	CACGTC	1 cut(s)	921
AjnI	CCWGG	8 cut(s)	589, 804, 878, 897, 1152, 1939, 2275, 2502
AjuI	GAANNNNNNNTTGG	4 cut(s)	358, 390, 1206, 1238
AluBI	AGCT	8 cut(s)	649, 664, 1140, 1355, 1412, 1532, 2518, 2530
AluI	AGCT	8 cut(s)	649, 664, 1140, 1355, 1412, 1532, 2518, 2530
Alw21I	GWGCWC	2 cut(s)	912, 2070
Alw26I	GTCTC	5 cut(s)	409, 1173, 1545, 1577, 1791
AlwNI	CAGNNNCTG	1 cut(s)	1493
Ama87I	CYCGRG	1 cut(s)	2227
Aor13HI	TCCGGA	1 cut(s)	2096
ApaI	GGGCCC	1 cut(s)	53
ApoI	RAATTY	3 cut(s)	179, 197, 2344
ArsI	GACNNNNNNTTYG	4 cut(s)	1036, 1068, 2438, 2470
AseI	ATTAAT	2 cut(s)	1569, 2169
Asp700I	GAANNNNTTC	1 cut(s)	1734
AspLEI	GCGC	4 cut(s)	115, 397, 989, 991
AsuC2I	CCSGG	4 cut(s)	785, 984, 2228, 2229
AsuHPI	GGTGA	7 cut(s)	616, 868, 1102, 1730, 2116, 2264, 2570
AsuII	TTCGAA	2 cut(s)	61, 779
AvaI	CYCGRG	1 cut(s)	2227
AvaII	GGWCC	3 cut(s)	164, 1249, 1936
BaeGI	GKGCMC	1 cut(s)	53
BanII	GRGCYC	1 cut(s)	53
BbrPI	CACGTG	1 cut(s)	1011
Bbv12I	GWGCWC	2 cut(s)	912, 2070
BbvCI	CCTCAGC	1 cut(s)	1146
BccI	CCATC	5 cut(s)	62, 547, 820, 1835, 2312
BceAI	ACGGC	5 cut(s)	816, 931, 1066, 2326, 2409
BciT130I	CCWGG	8 cut(s)	591, 806, 880, 899, 1154, 1941, 2277, 2504
BclI	TGATCA	1 cut(s)	1420
BcnI	CCSGG	4 cut(s)	785, 984, 2228, 2229
BcoDI	GTCTC	5 cut(s)	409, 1173, 1545, 1577, 1791
BfaI	CTAG	6 cut(s)	650, 999, 1500, 1536, 1580, 2015
BfmI	CTRYAG	1 cut(s)	815
BfoI	RGCGCY	1 cut(s)	398
BfuAI	ACCTGC	1 cut(s)	2388
BlpI	GCTNAGC	1 cut(s)	595
Bme18I	GGWCC	3 cut(s)	164, 1249, 1936
BmeRI	GACNNNNNGTC	3 cut(s)	919, 958, 961
BmeT110I	CYCGRG	1 cut(s)	2227
BmgBI	CACGTC	1 cut(s)	921
BmiI	GGNNCC	3 cut(s)	51, 1251, 1938
BmrI	ACTGGG	1 cut(s)	490
BmsI	GCATC	6 cut(s)	361, 574, 1480, 1505, 1669, 2330
BmuI	ACTGGG	1 cut(s)	490
BpmI	CTGGAG	4 cut(s)	4, 1962, 2175, 2298
Bpu10I	CCTNAGC	2 cut(s)	699, 1146
Bpu1102I	GCTNAGC	1 cut(s)	595
Bpu14I	TTCGAA	2 cut(s)	61, 779
BpuEI	CTTGAG	1 cut(s)	1544
BpuMI	CCSGG	4 cut(s)	785, 984, 2228, 2229
BsaAI	YACGTR	2 cut(s)	1011, 1623
BsaI	GGTCTC	1 cut(s)	1545
BsaWI	WCCGGW	1 cut(s)	2096
BsaXI	ACNNNNNCTCC	4 cut(s)	30, 60, 920, 950
Bsc4I	CCNNNNNNNGG	6 cut(s)	299, 790, 810, 904, 1069, 1158
Bse1I	ACTGG	3 cut(s)	496, 2189, 2286
Bse3DI	GCAATG	1 cut(s)	1968
BseAI	TCCGGA	1 cut(s)	2096
BseBI	CCWGG	8 cut(s)	591, 806, 880, 899, 1154, 1941, 2277, 2504
BseLI	CCNNNNNNNGG	6 cut(s)	299, 790, 810, 904, 1069, 1158
BseMI	GCAATG	1 cut(s)	1968
BseMII	CTCAG	5 cut(s)	412, 609, 690, 1137, 1764
BseNI	ACTGG	3 cut(s)	496, 2189, 2286
BsePI	GCGCGC	1 cut(s)	987
BseSI	GKGCMC	1 cut(s)	53
BseYI	CCCAGC	1 cut(s)	1062
BsgI	GTGCAG	3 cut(s)	781, 1263, 2471
Bsh1236I	CGCG	3 cut(s)	115, 737, 989
Bsh1285I	CGRYCG	1 cut(s)	708
BsiEI	CGRYCG	1 cut(s)	708
BsiHKAI	GWGCWC	2 cut(s)	912, 2070
BsiHKCI	CYCGRG	1 cut(s)	2227
BsiSI	CCGG	7 cut(s)	484, 784, 926, 983, 2097, 2228, 2522
BslFI	GGGAC	3 cut(s)	638, 1858, 1922
BslI	CCNNNNNNNGG	6 cut(s)	299, 790, 810, 904, 1069, 1158
BsmAI	GTCTC	5 cut(s)	409, 1173, 1545, 1577, 1791
BsmFI	GGGAC	3 cut(s)	638, 1858, 1922
BsmI	GAATGC	1 cut(s)	1122
Bso31I	GGTCTC	1 cut(s)	1545
BsoBI	CYCGRG	1 cut(s)	2227
Bsp119I	TTCGAA	2 cut(s)	61, 779
Bsp120I	GGGCCC	1 cut(s)	49
Bsp1286I	GDGCHC	3 cut(s)	53, 912, 2070
Bsp13I	TCCGGA	1 cut(s)	2096
Bsp1407I	TGTACA	3 cut(s)	1449, 1563, 1625
Bsp143I	GATC	5 cut(s)	675, 705, 873, 1420, 2541
Bsp1720I	GCTNAGC	1 cut(s)	595
Bsp19I	CCATGG	2 cut(s)	34, 390
BspCNI	CTCAG	5 cut(s)	411, 608, 691, 1138, 1765
BspEI	TCCGGA	1 cut(s)	2096
BspFNI	CGCG	3 cut(s)	115, 737, 989
BspLI	GGNNCC	3 cut(s)	51, 1251, 1938
BspMAI	CTGCAG	1 cut(s)	819
BspMI	ACCTGC	1 cut(s)	2388
BspT104I	TTCGAA	2 cut(s)	61, 779
BspTNI	GGTCTC	1 cut(s)	1545
BsrDI	GCAATG	1 cut(s)	1968
BsrGI	TGTACA	3 cut(s)	1449, 1563, 1625
BsrI	ACTGG	3 cut(s)	496, 2189, 2286
BssHII	GCGCGC	1 cut(s)	987
BssMI	GATC	5 cut(s)	675, 705, 873, 1420, 2541
BssT1I	CCWWGG	3 cut(s)	34, 167, 390
Bst2UI	CCWGG	8 cut(s)	591, 806, 880, 899, 1154, 1941, 2277, 2504
Bst4CI	ACNGT	2 cut(s)	1375, 1907
Bst6I	CTCTTC	2 cut(s)	421, 1972
BstAPI	GCANNNNNTGC	2 cut(s)	1021, 1493
BstAUI	TGTACA	3 cut(s)	1449, 1563, 1625
BstBAI	YACGTR	2 cut(s)	1011, 1623
BstBI	TTCGAA	2 cut(s)	61, 779
BstC8I	GCNNGC	4 cut(s)	819, 989, 1659, 2422
BstDEI	CTNAG	7 cut(s)	398, 595, 699, 1047, 1146, 1749, 1773
BstDSI	CCRYGG	2 cut(s)	34, 390
BstFNI	CGCG	3 cut(s)	115, 737, 989
BstH2I	RGCGCY	1 cut(s)	398
BstHHI	GCGC	4 cut(s)	115, 397, 989, 991
BstKTI	GATC	5 cut(s)	678, 708, 876, 1423, 2544
BstMAI	GTCTC	5 cut(s)	409, 1173, 1545, 1577, 1791
BstMBI	GATC	5 cut(s)	675, 705, 873, 1420, 2541
BstMCI	CGRYCG	1 cut(s)	708
BstNI	CCWGG	8 cut(s)	591, 806, 880, 899, 1154, 1941, 2277, 2504
BstNSI	RCATGY	2 cut(s)	1559, 1851
BstSFI	CTRYAG	1 cut(s)	815
BstSLI	GKGCMC	1 cut(s)	53
BstUI	CGCG	3 cut(s)	115, 737, 989
BstXI	CCANNNNNNTGG	2 cut(s)	590, 1868
BtgI	CCRYGG	2 cut(s)	34, 390
BtrI	CACGTC	1 cut(s)	921
BtsIMutI	CAGTG	1 cut(s)	2293
BveI	ACCTGC	1 cut(s)	2388
Cac8I	GCNNGC	4 cut(s)	819, 989, 1659, 2422
CaiI	CAGNNNCTG	1 cut(s)	1493
CfoI	GCGC	4 cut(s)	115, 397, 989, 991
Cfr9I	CCCGGG	1 cut(s)	2227
CseI	GACGC	1 cut(s)	1919
Csp6I	GTAC	8 cut(s)	1074, 1162, 1450, 1564, 1626, 1693, 1856, 1903
CviQI	GTAC	8 cut(s)	1074, 1162, 1450, 1564, 1626, 1693, 1856, 1903
DdeI	CTNAG	7 cut(s)	398, 595, 699, 1047, 1146, 1749, 1773
DpnI	GATC	5 cut(s)	677, 707, 875, 1422, 2543
DpnII	GATC	5 cut(s)	675, 705, 873, 1420, 2541
DraI	TTTAAA	1 cut(s)	244
DriI	GACNNNNNGTC	3 cut(s)	919, 958, 961
EaeI	YGGCCR	1 cut(s)	485
Eam1104I	CTCTTC	2 cut(s)	421, 1972
Eam1105I	GACNNNNNGTC	3 cut(s)	919, 958, 961
EarI	CTCTTC	2 cut(s)	421, 1972
EciI	GGCGGA	3 cut(s)	558, 607, 1343
Eco130I	CCWWGG	3 cut(s)	34, 167, 390
Eco147I	AGGCCT	1 cut(s)	2507
Eco24I	GRGCYC	1 cut(s)	53
Eco31I	GGTCTC	1 cut(s)	1545
Eco47I	GGWCC	3 cut(s)	164, 1249, 1936
Eco57I	CTGAAG	1 cut(s)	2057
Eco72I	CACGTG	1 cut(s)	1011
Eco88I	CYCGRG	1 cut(s)	2227
EcoO109I	RGGNCCY	1 cut(s)	1936
EcoRI	GAATTC	1 cut(s)	2344
EcoRII	CCWGG	8 cut(s)	589, 804, 878, 897, 1152, 1939, 2275, 2502
EcoT14I	CCWWGG	3 cut(s)	34, 167, 390
EcoT22I	ATGCAT	1 cut(s)	1853
EcoT38I	GRGCYC	1 cut(s)	53
ErhI	CCWWGG	3 cut(s)	34, 167, 390
FaqI	GGGAC	3 cut(s)	638, 1858, 1922
FauI	CCCGC	2 cut(s)	933, 2413
FauNDI	CATATG	2 cut(s)	1688, 2413
FbaI	TGATCA	1 cut(s)	1420
FblI	GTMKAC	1 cut(s)	1884
FriOI	GRGCYC	1 cut(s)	53
FspBI	CTAG	6 cut(s)	650, 999, 1500, 1536, 1580, 2015
GlaI	GCGC	4 cut(s)	114, 396, 988, 990
GsaI	CCCAGC	1 cut(s)	1066
GsuI	CTGGAG	4 cut(s)	4, 1962, 2175, 2298
HaeII	RGCGCY	1 cut(s)	398
HapII	CCGG	7 cut(s)	484, 784, 926, 983, 2097, 2228, 2522
HgaI	GACGC	1 cut(s)	1919
HhaI	GCGC	4 cut(s)	115, 397, 989, 991
Hin6I	GCGC	4 cut(s)	113, 395, 987, 989
HinP1I	GCGC	4 cut(s)	113, 395, 987, 989
HincII	GTYRAC	1 cut(s)	1885
HindII	GTYRAC	1 cut(s)	1885
HindIII	AAGCTT	1 cut(s)	2528
HpaII	CCGG	7 cut(s)	484, 784, 926, 983, 2097, 2228, 2522
HphI	GGTGA	7 cut(s)	616, 868, 1102, 1730, 2116, 2264, 2570
Hpy166II	GTNNAC	7 cut(s)	501, 1342, 1450, 1564, 1626, 1858, 1885
Hpy188I	TCNGA	9 cut(s)	401, 646, 682, 871, 1312, 1399, 1409, 2200, 2445
Hpy8I	GTNNAC	7 cut(s)	501, 1342, 1450, 1564, 1626, 1858, 1885
Hpy99I	CGWCG	5 cut(s)	917, 925, 956, 1102, 1109
HpyCH4III	ACNGT	2 cut(s)	1375, 1907
HpyCH4IV	ACGT	4 cut(s)	920, 1010, 1622, 2213
HpyF3I	CTNAG	7 cut(s)	398, 595, 699, 1047, 1146, 1749, 1773
HpySE526I	ACGT	4 cut(s)	920, 1010, 1622, 2213
HspAI	GCGC	4 cut(s)	113, 395, 987, 989
Kpn2I	TCCGGA	1 cut(s)	2096
Ksp22I	TGATCA	1 cut(s)	1420
Kzo9I	GATC	5 cut(s)	675, 705, 873, 1420, 2541
LmnI	GCTCC	5 cut(s)	226, 620, 669, 896, 2159
LweI	GCATC	6 cut(s)	361, 574, 1480, 1505, 1669, 2330
MaeI	CTAG	6 cut(s)	650, 999, 1500, 1536, 1580, 2015
MaeII	ACGT	4 cut(s)	920, 1010, 1622, 2213
MaeIII	GTNAC	7 cut(s)	137, 456, 963, 1108, 1907, 2104, 2558
MalI	GATC	5 cut(s)	677, 707, 875, 1422, 2543
MboI	GATC	5 cut(s)	675, 705, 873, 1420, 2541
MboII	GAAGA	7 cut(s)	408, 534, 1623, 1775, 1989, 2214, 2350
MfeI	CAATTG	1 cut(s)	2112
MhlI	GDGCHC	3 cut(s)	53, 912, 2070
MlyI	GAGTC	4 cut(s)	411, 1793, 2195, 2231
MmeI	TCCRAC	1 cut(s)	1377
Mph1103I	ATGCAT	1 cut(s)	1853
MroI	TCCGGA	1 cut(s)	2096
MroXI	GAANNNNTTC	1 cut(s)	1734
MslI	CAYNNNNRTG	2 cut(s)	39, 2339
MspA1I	CMGCKG	2 cut(s)	1066, 1337
MspI	CCGG	7 cut(s)	484, 784, 926, 983, 2097, 2228, 2522
MunI	CAATTG	1 cut(s)	2112
Mva1269I	GAATGC	1 cut(s)	1122
MvaI	CCWGG	8 cut(s)	591, 806, 880, 899, 1154, 1941, 2277, 2504
MvnI	CGCG	3 cut(s)	115, 737, 989
NciI	CCSGG	4 cut(s)	785, 984, 2228, 2229
NcoI	CCATGG	2 cut(s)	34, 390
NdeI	CATATG	2 cut(s)	1688, 2413
NdeII	GATC	5 cut(s)	675, 705, 873, 1420, 2541
NlaIV	GGNNCC	3 cut(s)	51, 1251, 1938
NmeAIII	GCCGAG	2 cut(s)	847, 1141
NmuCI	GTSAC	6 cut(s)	456, 963, 1108, 1907, 2104, 2558
NsiI	ATGCAT	1 cut(s)	1853
NspI	RCATGY	2 cut(s)	1559, 1851
NspV	TTCGAA	2 cut(s)	61, 779
PaqCI	CACCTGC	1 cut(s)	2388
PauI	GCGCGC	1 cut(s)	987
PceI	AGGCCT	1 cut(s)	2507
PcsI	WCGNNNNNNNCGW	1 cut(s)	1113
PctI	GAATGC	1 cut(s)	1122
PdmI	GAANNNNTTC	1 cut(s)	1734
PflFI	GACNNNGTC	1 cut(s)	2212
Ple19I	CGATCG	1 cut(s)	708
PleI	GAGTC	4 cut(s)	410, 1793, 2195, 2231
PmaCI	CACGTG	1 cut(s)	1011
PmlI	CACGTG	1 cut(s)	1011
PpsI	GAGTC	4 cut(s)	410, 1793, 2195, 2231
Ppu21I	YACGTR	2 cut(s)	1011, 1623
PpuMI	RGGWCCY	1 cut(s)	1936
PshBI	ATTAAT	2 cut(s)	1569, 2169
Psp5II	RGGWCCY	1 cut(s)	1936
Psp6I	CCWGG	8 cut(s)	589, 804, 878, 897, 1152, 1939, 2275, 2502
PspCI	CACGTG	1 cut(s)	1011
PspFI	CCCAGC	1 cut(s)	1062
PspGI	CCWGG	8 cut(s)	589, 804, 878, 897, 1152, 1939, 2275, 2502
PspN4I	GGNNCC	3 cut(s)	51, 1251, 1938
PspOMI	GGGCCC	1 cut(s)	49
PspPPI	RGGWCCY	1 cut(s)	1936
PsrI	GAACNNNNNNTAC	2 cut(s)	2109, 2141
PstI	CTGCAG	1 cut(s)	819
PstNI	CAGNNNCTG	1 cut(s)	1493
PsyI	GACNNNGTC	1 cut(s)	2212
PteI	GCGCGC	1 cut(s)	987
PvuI	CGATCG	1 cut(s)	708
RsaI	GTAC	8 cut(s)	1075, 1163, 1451, 1565, 1627, 1694, 1857, 1904
RsaNI	GTAC	8 cut(s)	1074, 1162, 1450, 1564, 1626, 1693, 1856, 1903
RseI	CAYNNNNRTG	2 cut(s)	39, 2339
SalI	GTCGAC	1 cut(s)	1883
Sau3AI	GATC	5 cut(s)	675, 705, 873, 1420, 2541
SchI	GAGTC	4 cut(s)	411, 1793, 2195, 2231
SduI	GDGCHC	3 cut(s)	53, 912, 2070
SfaNI	GCATC	6 cut(s)	361, 574, 1480, 1505, 1669, 2330
SfcI	CTRYAG	1 cut(s)	815
SfuI	TTCGAA	2 cut(s)	61, 779
SinI	GGWCC	3 cut(s)	164, 1249, 1936
SmaI	CCCGGG	1 cut(s)	2229
SmiMI	CAYNNNNRTG	2 cut(s)	39, 2339
SmlI	CTYRAG	1 cut(s)	1523
SmoI	CTYRAG	1 cut(s)	1523
SseBI	AGGCCT	1 cut(s)	2507
SspI	AATATT	1 cut(s)	1723
SspMI	CTAG	6 cut(s)	650, 999, 1500, 1536, 1580, 2015
StuI	AGGCCT	1 cut(s)	2507
StyI	CCWWGG	3 cut(s)	34, 167, 390
TaaI	ACNGT	2 cut(s)	1375, 1907
TaiI	ACGT	4 cut(s)	923, 1013, 1625, 2216
TaqI	TCGA	8 cut(s)	61, 708, 779, 912, 1086, 1181, 1726, 1884
TaqII	GACCGA	1 cut(s)	965
TatI	WGTACW	5 cut(s)	1449, 1563, 1625, 1855, 1902
TauI	GCSGC	7 cut(s)	538, 574, 577, 740, 1069, 1081, 2316
TscAI	CASTG	1 cut(s)	2293
TseFI	GTSAC	6 cut(s)	456, 963, 1108, 1907, 2104, 2558
Tsp45I	GTSAC	6 cut(s)	456, 963, 1108, 1907, 2104, 2558
TspGWI	ACGGA	3 cut(s)	741, 2541, 2577
TspMI	CCCGGG	1 cut(s)	2227
TspRI	CASTG	1 cut(s)	2293
Tth111I	GACNNNGTC	1 cut(s)	2212
VpaK11BI	GGWCC	3 cut(s)	164, 1249, 1936
VspI	ATTAAT	2 cut(s)	1569, 2169
XapI	RAATTY	3 cut(s)	179, 197, 2344
XbaI	TCTAGA	1 cut(s)	1579
XceI	RCATGY	2 cut(s)	1559, 1851
XmaI	CCCGGG	1 cut(s)	2227
XmiI	GTMKAC	1 cut(s)	1884
XmnI	GAANNNNTTC	1 cut(s)	1734
XspI	CTAG	6 cut(s)	650, 999, 1500, 1536, 1580, 2015
Zsp2I	ATGCAT	1 cut(s)	1853

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.