Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr6

Orthogroup ID

OG0013570

Physical Location & Seq

Genomic Coordinates Forward (+)

19415060 .. 19419076

Gene Structure 4017 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom06g14740.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2511 bp

ATGCCTAACATATTTGGGCTGCTATATGGTATTATTAATCCTTATTTTAATAAATTGGCGCGTAGTTTCATATACATTGGTAGGAACTTGCTGGGTTCTTGCCTTCTTGGACCTTGGTTGCCTAAATTCCCCTTTTCACTTAAATTTTCAATTTTATGGCAAAGTTCATTGGAGCAGCAAAATCCATTTAAAGCCTCTGCTTTCTGCCCCTCTGCCTCCACCACTCAATCAAAGCCTCCACGTTTAACCCCTCCTCTCGCTCTCTCTCTCTCTCTCTCTTCCCTCCCCAATGGATGCTTCCTCTACAACAACCATGGCGCTCAGAATCTCCTCCTCCTCTTCCTCCGCCTCCTCCTATTCTTCTTTCAAGCGCAACAAGTCACTCCCTTTCAAGTTCAGCACTTTCCGGCCACCTCCCCAGCCCACACCCTTCAAATCCCTCAAATGCATCCAAACGCCGCCGTCTTCCAATCCCAACCCATTAAAGCATCCGCCGCCGCCTCCCCAAAACCCTGGCTCAGCCTCCCCCTTCTCCTGCTCCGCCCTCACCCTCTCCTCTCAAACCTCCGAGCTCGTCCCCTTAAAGCTCCAAACTTTGATCGATCCGAGTTCCAATCTCTCCTTGAGCCGATCGAAAGAGTTAAACGCCTGTTGCACTACGCGGCTCTCCTCCCTCCGTTTGATGATTCGGGTCGGGTTGATTCGAACCGGGTCATGGGCTGCACGGCCCGGGTGTGGCTGCAGGCCGAGATGGACGAGGAGGGCAAGATGAGATTCGCGGCTGACAGCGATTCCGAGATCACCAGGGGCTTCTGCTCCTGCCTGGTTTCGGTGCTCGACGGCACGTCGCCGGAGGAGGTGTTGCGGGTCAAGACCGACGACTTGTCGTCACTCAATGTGGGATTGCCGGGCGCGCAGAGGTCTAGGATTAACACGTGGCATAATGTGCTGGTCAGTATGCAGAAAAAGACTAAGGCTTTGGTAGCCCAGCGGCATGGTACGCCGCCGTTCGAGCCTTTCCCGTCGCTCGTCGTCACCGCCGAGGGAATTCAGGCAAAAGGCAGCTTCGCTGAGGCCCAGGCGAGGTACTTGTCTCCTGATGAATCGAAGGTTGGGGAACTTCTTAATGTGTTGAAGGAAAAGAAAATTGGGGTTGTTGCACATTTTTACATGGACCCAGAGGTTCAAGGTATTTTAACTGCTGCACAGAAACATTGGCCTCACATCCATATATCTGATTCTTTAGTCATGGCGGATTCTGCTGTGAACATGGCGAAAGCTGGTTGCCAATACATTACAGTCTTGGGTGTTGATTTTATGTCGGAAAATGTCCGAGCTATACTTGATCAGGCTGGATTTGAAAAGGTTGGTGTGTACAGGATGTCAAATGAACGAATTGGATGTTCTTTGGCAGATGCTGCATCTAGCCCTTCGTATATGGGCTATCTTGAGGCAGCTTCTAGGTCTCCTCATTCATTGCATGTTGTGTACATTAATACTTCTCTAGAGACAAAAGCATACGCCCATGAGATTGTGCCAACAATTACGTGTACATCTTCAAACGTTGTCCAAACCATTTTGCAGGCTTTTGTTCAAGTTCCAGATGCAAACATATGGTACGGGCCTGATTCTTACATGGGTGCAAATATTCGAGAATTACTTCAGCAGATGACTAAGATGACTGATGAAGAAATTGCTGAGATACATCCAAAACATAATAGAGACTCAATCATATCTTTGCTACCTCGCCTTCATTATTTTCAGGATGGGACATGCATAGTACACCATTTATTTGGAAATGAAGTTGTTGACAGGATAAAAGAAATGTACTGCGACGCTTATCTAACTGCTCATTTCGAGGTCCCCGGAGAAATGTTTTCTTTGGCAATGGAAGCAAAGAGAAGAGGAATGGGGGTTGTGGGTTCTACCCAGAACATACTAGATTTCATAAAACAGAGAATTCAGGAGGCTTTGGATAGAAATGTCAACGAGCACCTTCAGTTTGTGTTAGGAACGGAATCTGGAATGGTGACTTCAATTGTAGCAGCAGTTCGTAGTTTGTTAGGTTCTGCGAGGTCTGGAGGAGCAGAAATTAATGTAGAAATTGTATTTCCAGTTTCATCAGACTCAGTGACAACGTCAAGTTCTTCCCCTGGCCTTGACTCTGTAAAAGTAGGTGATGTCATACTACCTGTCATACCTGGAGTTTCCAGTGGGGAGGGATGTTCCATCAACGGTGGCTGTGCATCCTGTCCATACATGAAGATGAATTCTCTCACCTCCCTCCTGAAAGTTTGCCACCACCTGCCCGATGAGACAAATAATACCCTTTCCGCATATGAAGCAGGCCGTTTCAAACTGCAAACTCCCAATGGAAAGTCAGTTGCGGATGTTGGGTGCGAACCAATACTGCACATGAGGCACTTCCAGGCCTCTAAAAAGCTGCCGGAGAAGCTTATTTCCCAGATCATTCATCCGTCTGGTGACGGCAACTCGGTGCTGTTAAATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006091 GO:0006139 GO:0006520 GO:0006531 GO:0006725 GO:0006732 GO:0006733 GO:0006753 GO:0006790 GO:0006793 GO:0006796 GO:0006807 GO:0008047 GO:0008150 GO:0008152 GO:0008987 GO:0009058 GO:0009060 GO:0009066 GO:0009108 GO:0009117 GO:0009165 GO:0009435 GO:0009507 GO:0009536 GO:0009893 GO:0009987 GO:0015980 GO:0016043 GO:0016053 GO:0016226 GO:0017144 GO:0018130 GO:0019222 GO:0019355 GO:0019359 GO:0019362 GO:0019363 GO:0019438 GO:0019637 GO:0019674 GO:0019752 GO:0019805 GO:0022607 GO:0030234 GO:0031163 GO:0031323 GO:0031325 GO:0034627 GO:0034628 GO:0034641 GO:0034654 GO:0042762 GO:0042802 GO:0042803 GO:0043085 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043648 GO:0043650 GO:0044085 GO:0044093 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0045333 GO:0046394 GO:0046483 GO:0046496 GO:0046874 GO:0046983 GO:0048037 GO:0048518 GO:0048522 GO:0050789 GO:0050790 GO:0050794 GO:0051176 GO:0051186 GO:0051188 GO:0051536 GO:0051539 GO:0051540 GO:0055086 GO:0055114 GO:0065007 GO:0065009 GO:0071704 GO:0071840 GO:0072524 GO:0072525 GO:0090407 GO:0098772 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901605

KEGG Pathways

Metabolic & Signaling

ko00760 ko01100 map00760 map01100

Pfam Domains

Protein Families

NadA SufE

Protein Analysis

837

Amino Acids

91.83

Weight (kDa)

6.97

Isoelectric Point (pI)

52.88

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013570)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G50210
fragaria_vesca	FvH4_5g06430 FvH4_5g06430 FvH4_5g06430 FvH4_5g06430
malus_domestica	MD06G1164800.v1.1 MD14G1170100.v1.1
prunus_persica	Prupe.5G164300_v2.0.a1
pyrus_communis	pycom06g14740
rosa_chinensis	RchiOBHm_Chr7g0192351
rosa_laevigata	RLG00000004377
rosa_multiflora	Rmu_sc0003108.1_g000001
rosa_roxburghii	Rroxscaffold_3G00263110
rosa_rugosa	Rorug07G0000600
rosa_samantha	Rh7BG126800 Rh7CG128400 Rh7DG128400
rosa_wichuraiana	Rw7G010710

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2313
Acc36I	ACCTGC	1 cut(s)	2313
AccII	CGCG	4 cut(s)	61, 662, 779, 914
AclI	AACGTT	1 cut(s)	1563
AclWI	GGATC	1 cut(s)	597
AcoI	YGGCCR	1 cut(s)	408
AcsI	RAATTY	5 cut(s)	125, 143, 1047, 1959, 2269
AcuI	CTGAAG	2 cut(s)	1646, 1982
AcvI	CACGTG	1 cut(s)	936
AfaI	GTAC	8 cut(s)	1000, 1088, 1376, 1490, 1552, 1619, 1782, 1829
AfiI	CCNNNNNNNGG	4 cut(s)	715, 735, 829, 1083
AflIII	ACRYGT	2 cut(s)	933, 1547
AhdI	GACNNNNNGTC	3 cut(s)	844, 883, 886
AjiI	CACGTC	1 cut(s)	846
AjnI	CCWGG	7 cut(s)	512, 803, 822, 1077, 2152, 2200, 2427
AjuI	GAANNNNNNNTTGG	6 cut(s)	281, 313, 1095, 1127, 1131, 1163
AluBI	AGCT	8 cut(s)	572, 587, 1065, 1280, 1337, 1457, 2443, 2455
AluI	AGCT	8 cut(s)	572, 587, 1065, 1280, 1337, 1457, 2443, 2455
Alw21I	GWGCWC	3 cut(s)	574, 837, 1995
Alw26I	GTCTC	5 cut(s)	1098, 1470, 1502, 1716, 2309
AlwI	GGATC	1 cut(s)	597
AlwNI	CAGNNNCTG	1 cut(s)	1418
Ama87I	CYCGRG	1 cut(s)	729
AoxI	GGCC	9 cut(s)	408, 726, 744, 1074, 1217, 1622, 2155, 2347, 2430
ApoI	RAATTY	5 cut(s)	125, 143, 1047, 1959, 2269
ArsI	GACNNNNNNTTYG	2 cut(s)	961, 993
AseI	ATTAAT	3 cut(s)	36, 1494, 2094
Asp700I	GAANNNNTTC	1 cut(s)	1659
AspLEI	GCGC	5 cut(s)	61, 320, 373, 914, 916
AspS9I	GGNCC	6 cut(s)	110, 727, 1075, 1174, 1622, 1861
AsuC2I	CCSGG	5 cut(s)	710, 730, 731, 909, 1866
AsuHPI	GGTGA	7 cut(s)	539, 793, 1027, 2041, 2189, 2269, 2495
AsuII	TTCGAA	1 cut(s)	704
AvaI	CYCGRG	1 cut(s)	729
AvaII	GGWCC	3 cut(s)	110, 1174, 1861
BanII	GRGCYC	1 cut(s)	574
BbrPI	CACGTG	1 cut(s)	936
BbsI	GAAGAC	1 cut(s)	457
Bbv12I	GWGCWC	3 cut(s)	574, 837, 1995
BbvCI	CCTCAGC	1 cut(s)	1071
BccI	CCATC	3 cut(s)	745, 1760, 2237
BceAI	ACGGC	6 cut(s)	446, 741, 856, 991, 2334, 2503
BciT130I	CCWGG	7 cut(s)	514, 805, 824, 1079, 2154, 2202, 2429
BclI	TGATCA	1 cut(s)	1345
BcnI	CCSGG	5 cut(s)	710, 730, 731, 909, 1866
BcoDI	GTCTC	5 cut(s)	1098, 1470, 1502, 1716, 2309
BfaI	CTAG	5 cut(s)	924, 1425, 1461, 1505, 1940
BfmI	CTRYAG	1 cut(s)	740
BfoI	RGCGCY	1 cut(s)	321
BfuAI	ACCTGC	1 cut(s)	2313
BlpI	GCTNAGC	1 cut(s)	518
Bme18I	GGWCC	3 cut(s)	110, 1174, 1861
BmeRI	GACNNNNNGTC	3 cut(s)	844, 883, 886
BmeT110I	CYCGRG	1 cut(s)	729
BmgBI	CACGTC	1 cut(s)	846
BmgT120I	GGNCC	6 cut(s)	110, 727, 1075, 1174, 1622, 1861
BmiI	GGNNCC	2 cut(s)	1176, 1863
BmsI	GCATC	7 cut(s)	284, 457, 497, 1405, 1430, 1594, 2255
BpiI	GAAGAC	1 cut(s)	457
BpmI	CTGGAG	2 cut(s)	2100, 2223
Bpu10I	CCTNAGC	1 cut(s)	1071
Bpu1102I	GCTNAGC	1 cut(s)	518
Bpu14I	TTCGAA	1 cut(s)	704
BpuEI	CTTGAG	2 cut(s)	644, 1469
BpuMI	CCSGG	5 cut(s)	710, 730, 731, 909, 1866
Bsa29I	ATCGAT	1 cut(s)	601
BsaAI	YACGTR	2 cut(s)	936, 1548
BsaI	GGTCTC	1 cut(s)	1470
BsaJI	CCNNGG	9 cut(s)	113, 313, 512, 729, 804, 1041, 1077, 1864, 2152
BsaXI	ACNNNNNCTCC	2 cut(s)	845, 875
Bsc4I	CCNNNNNNNGG	4 cut(s)	715, 735, 829, 1083
Bse1I	ACTGG	2 cut(s)	2114, 2211
Bse3DI	GCAATG	2 cut(s)	1475, 1893
BseBI	CCWGG	7 cut(s)	514, 805, 824, 1079, 2154, 2202, 2429
BseCI	ATCGAT	1 cut(s)	601
BseDI	CCNNGG	9 cut(s)	113, 313, 512, 729, 804, 1041, 1077, 1864, 2152
BseLI	CCNNNNNNNGG	4 cut(s)	715, 735, 829, 1083
BseMI	GCAATG	2 cut(s)	1475, 1893
BseMII	CTCAG	5 cut(s)	335, 532, 1062, 1689, 2142
BseNI	ACTGG	2 cut(s)	2114, 2211
BsePI	GCGCGC	1 cut(s)	912
BseYI	CCCAGC	3 cut(s)	91, 418, 987
BsgI	GTGCAG	3 cut(s)	706, 1188, 2396
Bsh1236I	CGCG	4 cut(s)	61, 662, 779, 914
Bsh1285I	CGRYCG	1 cut(s)	633
BshFI	GGCC	9 cut(s)	410, 728, 746, 1076, 1219, 1624, 2157, 2349, 2432
BshVI	ATCGAT	1 cut(s)	601
BsiEI	CGRYCG	1 cut(s)	633
BsiHKAI	GWGCWC	3 cut(s)	574, 837, 1995
BsiHKCI	CYCGRG	1 cut(s)	729
BsiSI	CCGG	7 cut(s)	407, 709, 730, 851, 908, 1866, 2447
BslFI	GGGAC	3 cut(s)	561, 1783, 1847
BslI	CCNNNNNNNGG	4 cut(s)	715, 735, 829, 1083
BsmAI	GTCTC	5 cut(s)	1098, 1470, 1502, 1716, 2309
BsmFI	GGGAC	3 cut(s)	561, 1783, 1847
BsnI	GGCC	9 cut(s)	410, 728, 746, 1076, 1219, 1624, 2157, 2349, 2432
Bso31I	GGTCTC	1 cut(s)	1470
BsoBI	CYCGRG	1 cut(s)	729
Bsp119I	TTCGAA	1 cut(s)	704
Bsp1286I	GDGCHC	3 cut(s)	574, 837, 1995
Bsp1407I	TGTACA	3 cut(s)	1374, 1488, 1550
Bsp143I	GATC	6 cut(s)	598, 602, 630, 798, 1345, 2466
Bsp1720I	GCTNAGC	1 cut(s)	518
Bsp19I	CCATGG	1 cut(s)	313
BspANI	GGCC	9 cut(s)	410, 728, 746, 1076, 1219, 1624, 2157, 2349, 2432
BspCNI	CTCAG	5 cut(s)	334, 531, 1063, 1690, 2141
BspDI	ATCGAT	1 cut(s)	601
BspFNI	CGCG	4 cut(s)	61, 662, 779, 914
BspLI	GGNNCC	2 cut(s)	1176, 1863
BspMAI	CTGCAG	1 cut(s)	744
BspMI	ACCTGC	1 cut(s)	2313
BspPI	GGATC	1 cut(s)	597
BspT104I	TTCGAA	1 cut(s)	704
BspTNI	GGTCTC	1 cut(s)	1470
BsrDI	GCAATG	2 cut(s)	1475, 1893
BsrGI	TGTACA	3 cut(s)	1374, 1488, 1550
BsrI	ACTGG	2 cut(s)	2114, 2211
BssECI	CCNNGG	9 cut(s)	113, 313, 512, 729, 804, 1041, 1077, 1864, 2152
BssHII	GCGCGC	1 cut(s)	912
BssMI	GATC	6 cut(s)	598, 602, 630, 798, 1345, 2466
BssT1I	CCWWGG	2 cut(s)	113, 313
Bst2UI	CCWGG	7 cut(s)	514, 805, 824, 1079, 2154, 2202, 2429
Bst4CI	ACNGT	2 cut(s)	1300, 2237
Bst6I	CTCTTC	3 cut(s)	283, 344, 1897
BstAPI	GCANNNNNTGC	2 cut(s)	946, 1418
BstAUI	TGTACA	3 cut(s)	1374, 1488, 1550
BstBAI	YACGTR	2 cut(s)	936, 1548
BstBI	TTCGAA	1 cut(s)	704
BstC8I	GCNNGC	4 cut(s)	744, 914, 1584, 2347
BstDEI	CTNAG	7 cut(s)	321, 518, 972, 1071, 1674, 1698, 2128
BstDSI	CCRYGG	1 cut(s)	313
BstFNI	CGCG	4 cut(s)	61, 662, 779, 914
BstH2I	RGCGCY	1 cut(s)	321
BstHHI	GCGC	5 cut(s)	61, 320, 373, 914, 916
BstKTI	GATC	6 cut(s)	601, 605, 633, 801, 1348, 2469
BstMAI	GTCTC	5 cut(s)	1098, 1470, 1502, 1716, 2309
BstMBI	GATC	6 cut(s)	598, 602, 630, 798, 1345, 2466
BstMCI	CGRYCG	1 cut(s)	633
BstNI	CCWGG	7 cut(s)	514, 805, 824, 1079, 2154, 2202, 2429
BstNSI	RCATGY	2 cut(s)	1484, 1776
BstSFI	CTRYAG	1 cut(s)	740
BstUI	CGCG	4 cut(s)	61, 662, 779, 914
BstV2I	GAAGAC	1 cut(s)	457
BstXI	CCANNNNNNTGG	3 cut(s)	513, 995, 1793
Bsu15I	ATCGAT	1 cut(s)	601
BsuRI	GGCC	9 cut(s)	410, 728, 746, 1076, 1219, 1624, 2157, 2349, 2432
BsuTUI	ATCGAT	1 cut(s)	601
BtgI	CCRYGG	1 cut(s)	313
BtrI	CACGTC	1 cut(s)	846
BtsIMutI	CAGTG	2 cut(s)	2136, 2218
BveI	ACCTGC	1 cut(s)	2313
Cac8I	GCNNGC	4 cut(s)	744, 914, 1584, 2347
CaiI	CAGNNNCTG	1 cut(s)	1418
CfoI	GCGC	5 cut(s)	61, 320, 373, 914, 916
Cfr13I	GGNCC	6 cut(s)	110, 727, 1075, 1174, 1622, 1861
Cfr9I	CCCGGG	1 cut(s)	729
ClaI	ATCGAT	1 cut(s)	601
CseI	GACGC	1 cut(s)	1844
Csp6I	GTAC	8 cut(s)	999, 1087, 1375, 1489, 1551, 1618, 1781, 1828
CviQI	GTAC	8 cut(s)	999, 1087, 1375, 1489, 1551, 1618, 1781, 1828
DdeI	CTNAG	7 cut(s)	321, 518, 972, 1071, 1674, 1698, 2128
DpnI	GATC	6 cut(s)	600, 604, 632, 800, 1347, 2468
DpnII	GATC	6 cut(s)	598, 602, 630, 798, 1345, 2466
DraI	TTTAAA	1 cut(s)	190
DriI	GACNNNNNGTC	3 cut(s)	844, 883, 886
EaeI	YGGCCR	1 cut(s)	408
Eam1104I	CTCTTC	3 cut(s)	283, 344, 1897
Eam1105I	GACNNNNNGTC	3 cut(s)	844, 883, 886
EarI	CTCTTC	3 cut(s)	283, 344, 1897
EciI	GGCGGA	4 cut(s)	335, 481, 530, 1268
Ecl136II	GAGCTC	1 cut(s)	572
Eco130I	CCWWGG	2 cut(s)	113, 313
Eco147I	AGGCCT	1 cut(s)	2432
Eco24I	GRGCYC	1 cut(s)	574
Eco31I	GGTCTC	1 cut(s)	1470
Eco47I	GGWCC	3 cut(s)	110, 1174, 1861
Eco53kI	GAGCTC	1 cut(s)	572
Eco57I	CTGAAG	2 cut(s)	1646, 1982
Eco72I	CACGTG	1 cut(s)	936
Eco88I	CYCGRG	1 cut(s)	729
EcoICRI	GAGCTC	1 cut(s)	572
EcoO109I	RGGNCCY	1 cut(s)	1861
EcoRI	GAATTC	3 cut(s)	1047, 1959, 2269
EcoRII	CCWGG	7 cut(s)	512, 803, 822, 1077, 2152, 2200, 2427
EcoT14I	CCWWGG	2 cut(s)	113, 313
EcoT22I	ATGCAT	2 cut(s)	450, 1778
EcoT38I	GRGCYC	1 cut(s)	574
ErhI	CCWWGG	2 cut(s)	113, 313
FaqI	GGGAC	3 cut(s)	561, 1783, 1847
FauI	CCCGC	1 cut(s)	858
FauNDI	CATATG	2 cut(s)	1613, 2338
FbaI	TGATCA	1 cut(s)	1345
FriOI	GRGCYC	1 cut(s)	574
FspBI	CTAG	5 cut(s)	924, 1425, 1461, 1505, 1940
GlaI	GCGC	5 cut(s)	60, 319, 372, 913, 915
GsaI	CCCAGC	3 cut(s)	95, 422, 991
GsuI	CTGGAG	2 cut(s)	2100, 2223
HaeII	RGCGCY	1 cut(s)	321
HaeIII	GGCC	9 cut(s)	410, 728, 746, 1076, 1219, 1624, 2157, 2349, 2432
HapII	CCGG	7 cut(s)	407, 709, 730, 851, 908, 1866, 2447
HgaI	GACGC	1 cut(s)	1844
HhaI	GCGC	5 cut(s)	61, 320, 373, 914, 916
Hin6I	GCGC	5 cut(s)	59, 318, 371, 912, 914
HinP1I	GCGC	5 cut(s)	59, 318, 371, 912, 914
HincII	GTYRAC	2 cut(s)	1810, 1987
HindII	GTYRAC	2 cut(s)	1810, 1987
HindIII	AAGCTT	1 cut(s)	2453
HpaII	CCGG	7 cut(s)	407, 709, 730, 851, 908, 1866, 2447
HphI	GGTGA	7 cut(s)	539, 793, 1027, 2041, 2189, 2269, 2495
Hpy166II	GTNNAC	7 cut(s)	1267, 1375, 1489, 1551, 1783, 1810, 1987
Hpy188I	TCNGA	8 cut(s)	324, 569, 607, 796, 1237, 1324, 1334, 2125
Hpy8I	GTNNAC	7 cut(s)	1267, 1375, 1489, 1551, 1783, 1810, 1987
Hpy99I	CGWCG	6 cut(s)	842, 850, 881, 1027, 1034, 1838
HpyAV	CCTTC	8 cut(s)	113, 440, 539, 1102, 1129, 1440, 1760, 2006
HpyCH4III	ACNGT	2 cut(s)	1300, 2237
HpyCH4IV	ACGT	6 cut(s)	241, 845, 935, 1547, 1563, 2138
HpyF3I	CTNAG	7 cut(s)	321, 518, 972, 1071, 1674, 1698, 2128
HpySE526I	ACGT	6 cut(s)	241, 845, 935, 1547, 1563, 2138
HspAI	GCGC	5 cut(s)	59, 318, 371, 912, 914
Ksp22I	TGATCA	1 cut(s)	1345
Kzo9I	GATC	6 cut(s)	598, 602, 630, 798, 1345, 2466
LmnI	GCTCC	5 cut(s)	172, 543, 592, 821, 2084
LweI	GCATC	7 cut(s)	284, 457, 497, 1405, 1430, 1594, 2255
MaeI	CTAG	5 cut(s)	924, 1425, 1461, 1505, 1940
MaeII	ACGT	6 cut(s)	241, 845, 935, 1547, 1563, 2138
MaeIII	GTNAC	6 cut(s)	379, 888, 1033, 2029, 2131, 2483
MalI	GATC	6 cut(s)	600, 604, 632, 800, 1347, 2468
MboI	GATC	6 cut(s)	598, 602, 630, 798, 1345, 2466
MboII	GAAGA	9 cut(s)	270, 331, 352, 457, 1548, 1700, 1914, 2139, 2275
MfeI	CAATTG	1 cut(s)	2037
MhlI	GDGCHC	3 cut(s)	574, 837, 1995
MlyI	GAGTC	3 cut(s)	1718, 2120, 2156
MmeI	TCCRAC	1 cut(s)	1302
Mph1103I	ATGCAT	2 cut(s)	450, 1778
MroXI	GAANNNNTTC	1 cut(s)	1659
MslI	CAYNNNNRTG	1 cut(s)	2264
MspA1I	CMGCKG	1 cut(s)	991
MspI	CCGG	7 cut(s)	407, 709, 730, 851, 908, 1866, 2447
MunI	CAATTG	1 cut(s)	2037
MvaI	CCWGG	7 cut(s)	514, 805, 824, 1079, 2154, 2202, 2429
MvnI	CGCG	4 cut(s)	61, 662, 779, 914
NciI	CCSGG	5 cut(s)	710, 730, 731, 909, 1866
NcoI	CCATGG	1 cut(s)	313
NdeI	CATATG	2 cut(s)	1613, 2338
NdeII	GATC	6 cut(s)	598, 602, 630, 798, 1345, 2466
NlaIV	GGNNCC	2 cut(s)	1176, 1863
NmeAIII	GCCGAG	2 cut(s)	772, 1066
NmuCI	GTSAC	6 cut(s)	379, 888, 1033, 2029, 2131, 2483
NsiI	ATGCAT	2 cut(s)	450, 1778
NspI	RCATGY	2 cut(s)	1484, 1776
NspV	TTCGAA	1 cut(s)	704
PaqCI	CACCTGC	1 cut(s)	2313
PauI	GCGCGC	1 cut(s)	912
PceI	AGGCCT	1 cut(s)	2432
PcsI	WCGNNNNNNNCGW	1 cut(s)	1038
PdmI	GAANNNNTTC	1 cut(s)	1659
PflFI	GACNNNGTC	1 cut(s)	2137
Ple19I	CGATCG	1 cut(s)	633
PleI	GAGTC	3 cut(s)	1718, 2120, 2156
PmaCI	CACGTG	1 cut(s)	936
PmlI	CACGTG	1 cut(s)	936
PpsI	GAGTC	3 cut(s)	1718, 2120, 2156
Ppu21I	YACGTR	2 cut(s)	936, 1548
PpuMI	RGGWCCY	1 cut(s)	1861
PshBI	ATTAAT	3 cut(s)	36, 1494, 2094
Psp124BI	GAGCTC	1 cut(s)	574
Psp1406I	AACGTT	1 cut(s)	1563
Psp5II	RGGWCCY	1 cut(s)	1861
Psp6I	CCWGG	7 cut(s)	512, 803, 822, 1077, 2152, 2200, 2427
PspCI	CACGTG	1 cut(s)	936
PspFI	CCCAGC	3 cut(s)	91, 418, 987
PspGI	CCWGG	7 cut(s)	512, 803, 822, 1077, 2152, 2200, 2427
PspN4I	GGNNCC	2 cut(s)	1176, 1863
PspPI	GGNCC	6 cut(s)	110, 727, 1075, 1174, 1622, 1861
PspPPI	RGGWCCY	1 cut(s)	1861
PsrI	GAACNNNNNNTAC	2 cut(s)	2034, 2066
PstI	CTGCAG	1 cut(s)	744
PstNI	CAGNNNCTG	1 cut(s)	1418
PsyI	GACNNNGTC	1 cut(s)	2137
PteI	GCGCGC	1 cut(s)	912
PvuI	CGATCG	1 cut(s)	633
RsaI	GTAC	8 cut(s)	1000, 1088, 1376, 1490, 1552, 1619, 1782, 1829
RsaNI	GTAC	8 cut(s)	999, 1087, 1375, 1489, 1551, 1618, 1781, 1828
RseI	CAYNNNNRTG	1 cut(s)	2264
SacI	GAGCTC	1 cut(s)	574
Sau3AI	GATC	6 cut(s)	598, 602, 630, 798, 1345, 2466
Sau96I	GGNCC	6 cut(s)	110, 727, 1075, 1174, 1622, 1861
SchI	GAGTC	3 cut(s)	1718, 2120, 2156
SduI	GDGCHC	3 cut(s)	574, 837, 1995
SfaNI	GCATC	7 cut(s)	284, 457, 497, 1405, 1430, 1594, 2255
SfcI	CTRYAG	1 cut(s)	740
SfuI	TTCGAA	1 cut(s)	704
SinI	GGWCC	3 cut(s)	110, 1174, 1861
SmaI	CCCGGG	1 cut(s)	731
SmiMI	CAYNNNNRTG	1 cut(s)	2264
SmlI	CTYRAG	2 cut(s)	623, 1448
SmoI	CTYRAG	2 cut(s)	623, 1448
SseBI	AGGCCT	1 cut(s)	2432
SspI	AATATT	1 cut(s)	1648
SspMI	CTAG	5 cut(s)	924, 1425, 1461, 1505, 1940
SstI	GAGCTC	1 cut(s)	574
StuI	AGGCCT	1 cut(s)	2432
StyI	CCWWGG	2 cut(s)	113, 313
TaaI	ACNGT	2 cut(s)	1300, 2237
TaiI	ACGT	6 cut(s)	244, 848, 938, 1550, 1566, 2141
TaqI	TCGA	8 cut(s)	601, 633, 704, 837, 1011, 1106, 1651, 1857
TaqII	GACCGA	1 cut(s)	890
TatI	WGTACW	5 cut(s)	1374, 1488, 1550, 1780, 1827
TauI	GCSGC	7 cut(s)	461, 497, 500, 665, 782, 994, 1006
TscAI	CASTG	2 cut(s)	2136, 2218
TseFI	GTSAC	6 cut(s)	379, 888, 1033, 2029, 2131, 2483
Tsp45I	GTSAC	6 cut(s)	379, 888, 1033, 2029, 2131, 2483
TspGWI	ACGGA	3 cut(s)	666, 2030, 2466
TspMI	CCCGGG	1 cut(s)	729
TspRI	CASTG	2 cut(s)	2136, 2218
Tth111I	GACNNNGTC	1 cut(s)	2137
VpaK11BI	GGWCC	3 cut(s)	110, 1174, 1861
VspI	ATTAAT	3 cut(s)	36, 1494, 2094
XapI	RAATTY	5 cut(s)	125, 143, 1047, 1959, 2269
XbaI	TCTAGA	1 cut(s)	1504
XceI	RCATGY	2 cut(s)	1484, 1776
XmaI	CCCGGG	1 cut(s)	729
XmnI	GAANNNNTTC	1 cut(s)	1659
XspI	CTAG	5 cut(s)	924, 1425, 1461, 1505, 1940
Zsp2I	ATGCAT	2 cut(s)	450, 1778

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.