FvH4_5g07300

Kelch domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0006640
Physical Location & Seq
Forward (+)
4273608 .. 4282219
8612 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g07300.t1

Sequence Viewer

Length: 1962 bp
ATGGGGAAGAAGGGGAAGAAGCCCGGAAAGGGAAAAGAGAAGACGGAGAAGAAAACAGCCAAAGCTGAGGAAAAGAGAGCTCGCCGAGAGTCCAAGAAGCTCTCCCCCGAGGACGACATCGATGCCATTTTGATGAGTATACAAAAAGAGGAAGCCAAGAAGAAGGAGGTTCTTGTTGAGGAAAATGTCCCTGCTCCGTCTCCGCGGTCCAACTGCACTCTGAGCATCAATCCCTTGAAAGAGACAGAGTTGATCCTTTATGGGGGTGAATTCTACAATGGTAATAAGACGTTTGTGTATGGGGATCTTTACCGGTACGACGTTGAAAAGCAGGAATGGAAGTTAATTTCGAGCCCCAATAGTCCGCCCCCTCGTAGCGCTCACCAGGCTGTCACTTGGAAGAACTATCTTTACATCTTTGGTGGTGAATTTACTTCCCCAAACCAAGAGAGGTTCCATCACTATAAGGACTTTTGGATGTTGGATCTCAAAACAAATCAATGGGAACAGCTAAACTTAAAAGGGTGTCCAAGTCCACGTTCAGGTCATCGAATGGTATTGTACAAGCACAAGATTATTGTTTTTGGCGGCTTTTATGACACTCTCAGAGAAGTGAGGTACCATAATGATCTTTATGTATTTGACCTGGACCTGTTCAAGTGGCAAGAAATAACCCCTAGGCCTGGGGCTATGTGGCCCAGTGCACGAAGTGGCTTTCAATTTTTTGTTTACCAAGATGAAATCTTTCTATATGGTGGCTATGCCAAAGAAGTTTCATCTGATAAAACCAGCTCTGAGAAAGGAATTGTTCATTCAGACTTATGGTCCCTTGATCCTAGGACATGGGAATGGAACAAGGTAAAAAAGAGTGGGATGCCTCCTGGACCTCGTGCTGGGTTTTCCATGTGTGTTCATAAGAAGCGAGCTTTGCTCTTTGGGGGTGTAGTGGACATGGAAGTTCAAGGTGATGTAATGATGAGCTTATTCTTGGATGAACTTTATGGCTTCCAATTAGACAACCATCGCTGGTACCCGTTGGAGTTACGGAAGGGGAAGTCAACAAAAGATAAGGTAAAAAAAAGTTCTGGACGAAAACGTAATAATGATGGTGACGATAAAGTAGATACAACTGAACAAGAGGAGTCTAAAGAAAATGGCAAAGATGAGAATTCTGAATACAATGAAGAAGTAGGAGACTCGGGGAGCAAAATTGATGGCATATCGCAGCAATTGGCTACAGCCATGAATGTTGATGATTCTGATTTACCAGAGATAGTGAAGCCCTGTGGACGTATCAATTCCTGCATGGTTGTTGGAAGAGATACATTATATGTTTATGGGGGAATGATGGAGGTCAAGGATCAAGAAATTACACTGGATGACTTATATTCTCTTAATCTTAGCAAACTTGATGAGTGGAAGTGCATCATACCGGCATCACAATCTGAATGGGTTGAGGCCTCTGAAGATGAAGATGAAGATGATGATGATGATGAGGATGAAGACGGGGATGAAGATGAAGATGAAGATGAGGATGAAGATGAGGAGACCGATGATGATAATGATGGAGAGAGTGGTAAAGGTGGAACACTTCAAATGGGAGAAGCTGTTGCTTTAATCAAGGGTGGGGGAAAGACTCTGCGGAGGAAAGAGAAACGGGCCAGAATAGAGCAGATTAGAGCCAGTCTTGGCCTTTCAGATTCGCAAAGAACCCCAACGCCTGGTGAATCTTTGCGAGATTTCTACAAACGTACAAATATGTACTGGCAAATGGCAGCCCACGAACACACTCAACACACTGGAAAGGAGCTTCGTAAGGATGGCTTTGATCTTGCTGAAGCTCGATACTCAGAGCTTAAACCAATTCTGGATGAGTTGGCCATATTGGAGGCAGAGCAGAAAGCTGAAGAGCAAGAAACTGAAACCAGTACTAGTGCTAGGAAGAGAGGCAAGAAAAGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4110 Kelch_3 Kelch_4 Kelch_5

Protein Analysis

654

Amino Acids

74.83

Weight (kDa)

5.05

Isoelectric Point (pI)

48.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Kelch_KLHDC2_KLHL20_DRC7 PF24681 43 - 253 3.4e-40 KLHDC2/KLHL20/DRC7 Kelch-repeats domain
Beta-prop_FBX42 PF13415 60 - 199 7.4e-28 FBX42, beta-propeller domain
Beta-prop_ATRN-LZTR1 PF24981 86 - 173 4.2e-15 Attractin/LZTR1 beta-propeller
NANM PF24996 103 - 224 1.5e-08 N-acetylneuraminate epimerase
Kelch_FKB95 PF25210 110 - 265 1.6e-08 FKB95, Kelch-repeats domain
Beta-prop_ATRN-LZTR1 PF24981 177 - 226 2.4e-08 Attractin/LZTR1 beta-propeller
Beta-prop_FBX42 PF13415 190 - 262 4.7e-09 FBX42, beta-propeller domain
Beta-prop_ATRN-LZTR1 PF24981 231 - 289 7.4e-06 Attractin/LZTR1 beta-propeller
Beta-prop_FBX42 PF13415 265 - 349 1.8e-12 FBX42, beta-propeller domain
Kelch_KLHDC2_KLHL20_DRC7 PF24681 271 - 348 7.6e-12 KLHDC2/KLHL20/DRC7 Kelch-repeats domain
DUF4110 PF13422 564 - 648 1.2e-29 Domain of unknown function (DUF4110)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 2 cut(s) 618, 1029
AccB1I GGYRCC 2 cut(s) 618, 1029
AccB7I CCANNNNNTGG 1 cut(s) 1721
AccI GTMKAC 1 cut(s) 139
AccII CGCG 1 cut(s) 205
AciI CCGC 5 cut(s) 203, 205, 365, 588, 1642
AclWI GGATC 5 cut(s) 247, 312, 492, 827, 1368
AcoI YGGCCR 1 cut(s) 1878
AcsI RAATTY 3 cut(s) 269, 428, 1168
AcuI CTGAAG 3 cut(s) 1485, 1857, 1926
AdeI CACNNNGTG 1 cut(s) 710
AfaI GTAC 7 cut(s) 317, 563, 620, 1031, 1753, 1763, 1930
AfeI AGCGCT 1 cut(s) 379
AfiI CCNNNNNNNGG 6 cut(s) 29, 262, 542, 683, 893, 1721
AgeI ACCGGT 1 cut(s) 312
AgsI TTSAA 6 cut(s) 238, 326, 658, 719, 962, 1595
AhdI GACNNNNNGTC 1 cut(s) 823
AhlI ACTAGT 1 cut(s) 1931
AjnI CCWGG 5 cut(s) 384, 645, 682, 880, 1720
AjuI GAANNNNNNNTTGG 2 cut(s) 523, 555
Alw21I GWGCWC 2 cut(s) 82, 706
Alw26I GTCTC 4 cut(s) 204, 236, 1188, 1541
Alw44I GTGCAC 1 cut(s) 702
AlwI GGATC 5 cut(s) 247, 312, 492, 827, 1368
Ama87I CYCGRG 2 cut(s) 107, 1198
Aor51HI AGCGCT 1 cut(s) 379
AoxI GGCC 6 cut(s) 680, 695, 1458, 1659, 1690, 1878
ApaLI GTGCAC 1 cut(s) 702
ApeKI GCWGC 2 cut(s) 1225, 1775
ApoI RAATTY 3 cut(s) 269, 428, 1168
AsiGI ACCGGT 1 cut(s) 312
Asp700I GAANNNNTTC 1 cut(s) 744
Asp718I GGTACC 2 cut(s) 618, 1029
AspA2I CCTAGG 2 cut(s) 677, 836
AspLEI GCGC 1 cut(s) 380
AspS9I GGNCC 6 cut(s) 207, 649, 696, 825, 884, 1659
AsuC2I CCSGG 1 cut(s) 24
AsuHPI GGTGA 6 cut(s) 278, 374, 437, 977, 1121, 1736
AvaI CYCGRG 2 cut(s) 107, 1198
AvaII GGWCC 4 cut(s) 207, 649, 825, 884
AvrII CCTAGG 2 cut(s) 677, 836
BaeGI GKGCMC 1 cut(s) 706
BalI TGGCCA 1 cut(s) 1880
BanI GGYRCC 2 cut(s) 618, 1029
BanII GRGCYC 2 cut(s) 82, 356
BauI CACGAG 1 cut(s) 888
BbsI GAAGAC 2 cut(s) 47, 1509
Bbv12I GWGCWC 2 cut(s) 82, 706
BbvCI CCTCAGC 1 cut(s) 66
BbvI GCAGC 2 cut(s) 1237, 1787
BccI CCATC 7 cut(s) 465, 1029, 1100, 1208, 1342, 1559, 1814
BcgI CGANNNNNNTGC 2 cut(s) 104, 138
BciT130I CCWGG 5 cut(s) 386, 647, 684, 882, 1722
BcnI CCSGG 1 cut(s) 24
BcoDI GTCTC 4 cut(s) 204, 236, 1188, 1541
BcuI ACTAGT 1 cut(s) 1931
BfaI CTAG 4 cut(s) 678, 837, 1932, 1938
BfmI CTRYAG 1 cut(s) 1236
BfoI RGCGCY 1 cut(s) 381
BisI GCNGC 3 cut(s) 589, 1226, 1776
BlnI CCTAGG 2 cut(s) 677, 836
BlsI GCNGC 3 cut(s) 590, 1227, 1777
BmcAI AGTACT 1 cut(s) 1930
Bme1390I CCNGG 6 cut(s) 24, 386, 647, 684, 882, 1722
Bme18I GGWCC 4 cut(s) 207, 649, 825, 884
BmeRI GACNNNNNGTC 1 cut(s) 823
BmeT110I CYCGRG 2 cut(s) 107, 1198
BmgT120I GGNCC 6 cut(s) 207, 649, 696, 825, 884, 1659
BmiI GGNNCC 4 cut(s) 455, 620, 827, 1031
BmrFI CCNGG 6 cut(s) 24, 386, 647, 684, 882, 1722
BmrI ACTGGG 1 cut(s) 693
BmsI GCATC 5 cut(s) 112, 234, 864, 1434, 1445
BmuI ACTGGG 1 cut(s) 693
BpiI GAAGAC 2 cut(s) 47, 1509
BplI GAGNNNNNCTC 2 cut(s) 915, 947
Bpu10I CCTNAGC 1 cut(s) 66
BpuMI CCSGG 1 cut(s) 24
Bsa29I ATCGAT 1 cut(s) 120
BsaI GGTCTC 1 cut(s) 1541
BsaJI CCNNGG 5 cut(s) 108, 203, 677, 683, 836
BsaWI WCCGGW 1 cut(s) 312
BsaXI ACNNNNNCTCC 2 cut(s) 1593, 1623
Bsc4I CCNNNNNNNGG 6 cut(s) 29, 262, 542, 683, 893, 1721
Bse118I RCCGGY 2 cut(s) 312, 1432
Bse1I ACTGG 6 cut(s) 699, 1380, 1683, 1769, 1804, 1926
BseBI CCWGG 5 cut(s) 386, 647, 684, 882, 1722
BseCI ATCGAT 1 cut(s) 120
BseDI CCNNGG 5 cut(s) 108, 203, 677, 683, 836
BseGI GGATG 9 cut(s) 483, 879, 997, 1384, 1504, 1516, 1540, 1825, 1876
BseLI CCNNNNNNNGG 6 cut(s) 29, 262, 542, 683, 893, 1721
BseMII CTCAG 5 cut(s) 57, 212, 619, 786, 1863
BseNI ACTGG 6 cut(s) 699, 1380, 1683, 1769, 1804, 1926
BseRI GAGGAG 2 cut(s) 1154, 1559
BseSI GKGCMC 1 cut(s) 706
BseXI GCAGC 2 cut(s) 1237, 1787
BseYI CCCAGC 1 cut(s) 893
BsgI GTGCAG 1 cut(s) 199
Bsh1236I CGCG 1 cut(s) 205
BshFI GGCC 6 cut(s) 682, 697, 1460, 1661, 1692, 1880
BshNI GGYRCC 2 cut(s) 618, 1029
BshTI ACCGGT 1 cut(s) 312
BshVI ATCGAT 1 cut(s) 120
BsiHKAI GWGCWC 2 cut(s) 82, 706
BsiHKCI CYCGRG 2 cut(s) 107, 1198
BsiSI CCGG 3 cut(s) 24, 313, 1433
BslFI GGGAC 2 cut(s) 173, 811
BslI CCNNNNNNNGG 6 cut(s) 29, 262, 542, 683, 893, 1721
BsmAI GTCTC 4 cut(s) 204, 236, 1188, 1541
BsmBI CGTCTC 1 cut(s) 204
BsmFI GGGAC 2 cut(s) 173, 811
BsnI GGCC 6 cut(s) 682, 697, 1460, 1661, 1692, 1880
Bso31I GGTCTC 1 cut(s) 1541
BsoBI CYCGRG 2 cut(s) 107, 1198
Bsp1286I GDGCHC 3 cut(s) 82, 356, 706
Bsp1407I TGTACA 1 cut(s) 561
Bsp143I GATC 7 cut(s) 252, 304, 484, 628, 832, 1360, 1828
BspACI CCGC 5 cut(s) 203, 205, 365, 588, 1642
BspANI GGCC 6 cut(s) 682, 697, 1460, 1661, 1692, 1880
BspCNI CTCAG 5 cut(s) 58, 213, 618, 787, 1862
BspDI ATCGAT 1 cut(s) 120
BspFNI CGCG 1 cut(s) 205
BspLI GGNNCC 4 cut(s) 455, 620, 827, 1031
BspPI GGATC 5 cut(s) 247, 312, 492, 827, 1368
BspQI GCTCTTC 1 cut(s) 1902
BspT107I GGYRCC 2 cut(s) 618, 1029
BspTNI GGTCTC 1 cut(s) 1541
BsrFI RCCGGY 2 cut(s) 312, 1432
BsrGI TGTACA 1 cut(s) 561
BsrI ACTGG 6 cut(s) 699, 1380, 1683, 1769, 1804, 1926
BssAI RCCGGY 2 cut(s) 312, 1432
BssECI CCNNGG 5 cut(s) 108, 203, 677, 683, 836
BssMI GATC 7 cut(s) 252, 304, 484, 628, 832, 1360, 1828
BssNAI GTATAC 1 cut(s) 140
BssSI CACGAG 1 cut(s) 888
BssT1I CCWWGG 2 cut(s) 677, 836
Bst1107I GTATAC 1 cut(s) 140
Bst2BI CACGAG 1 cut(s) 888
Bst2UI CCWGG 5 cut(s) 386, 647, 684, 882, 1722
Bst6I CTCTTC 3 cut(s) 1312, 1902, 1937
BstAUI TGTACA 1 cut(s) 561
BstC8I GCNNGC 2 cut(s) 82, 924
BstDEI CTNAG 6 cut(s) 66, 221, 605, 795, 1400, 1849
BstDSI CCRYGG 1 cut(s) 203
BstF5I GGATG 9 cut(s) 483, 879, 997, 1384, 1504, 1516, 1540, 1825, 1876
BstFNI CGCG 1 cut(s) 205
BstH2I RGCGCY 1 cut(s) 381
BstHHI GCGC 1 cut(s) 380
BstKTI GATC 7 cut(s) 255, 307, 487, 631, 835, 1363, 1831
BstMAI GTCTC 4 cut(s) 204, 236, 1188, 1541
BstMBI GATC 7 cut(s) 252, 304, 484, 628, 832, 1360, 1828
BstMWI GCNNNNNNNGC 3 cut(s) 222, 386, 928
BstNI CCWGG 5 cut(s) 386, 647, 684, 882, 1722
BstSCI CCNGG 6 cut(s) 22, 384, 645, 682, 880, 1720
BstSFI CTRYAG 1 cut(s) 1236
BstSLI GKGCMC 1 cut(s) 706
BstUI CGCG 1 cut(s) 205
BstV1I GCAGC 2 cut(s) 1237, 1787
BstV2I GAAGAC 2 cut(s) 47, 1509
BstX2I RGATCY 2 cut(s) 304, 484
BstYI RGATCY 2 cut(s) 304, 484
BstZ17I GTATAC 1 cut(s) 140
Bsu15I ATCGAT 1 cut(s) 120
BsuRI GGCC 6 cut(s) 682, 697, 1460, 1661, 1692, 1880
BsuTUI ATCGAT 1 cut(s) 120
BtgI CCRYGG 1 cut(s) 203
BtgZI GCGATG 1 cut(s) 1007
BtsCI GGATG 9 cut(s) 483, 879, 997, 1384, 1504, 1516, 1540, 1825, 1876
BtsIMutI CAGTG 3 cut(s) 706, 1373, 1797
Cac8I GCNNGC 2 cut(s) 82, 924
CfoI GCGC 1 cut(s) 380
Cfr10I RCCGGY 2 cut(s) 312, 1432
Cfr13I GGNCC 6 cut(s) 207, 649, 696, 825, 884, 1659
Cfr42I CCGCGG 1 cut(s) 206
ClaI ATCGAT 1 cut(s) 120
Csp6I GTAC 7 cut(s) 316, 562, 619, 1030, 1752, 1762, 1929
CspAI ACCGGT 1 cut(s) 312
CviAII CATG 5 cut(s) 843, 904, 952, 1243, 1306
CviQI GTAC 7 cut(s) 316, 562, 619, 1030, 1752, 1762, 1929
DdeI CTNAG 6 cut(s) 66, 221, 605, 795, 1400, 1849
DpnI GATC 7 cut(s) 254, 306, 486, 630, 834, 1362, 1830
DpnII GATC 7 cut(s) 252, 304, 484, 628, 832, 1360, 1828
DraIII CACNNNGTG 1 cut(s) 710
DriI GACNNNNNGTC 1 cut(s) 823
EaeI YGGCCR 1 cut(s) 1878
Eam1104I CTCTTC 3 cut(s) 1312, 1902, 1937
Eam1105I GACNNNNNGTC 1 cut(s) 823
EarI CTCTTC 3 cut(s) 1312, 1902, 1937
EciI GGCGGA 1 cut(s) 354
Ecl136II GAGCTC 1 cut(s) 80
Eco130I CCWWGG 2 cut(s) 677, 836
Eco147I AGGCCT 2 cut(s) 682, 1460
Eco24I GRGCYC 2 cut(s) 82, 356
Eco31I GGTCTC 1 cut(s) 1541
Eco47I GGWCC 4 cut(s) 207, 649, 825, 884
Eco47III AGCGCT 1 cut(s) 379
Eco53kI GAGCTC 1 cut(s) 80
Eco57I CTGAAG 3 cut(s) 1485, 1857, 1926
Eco88I CYCGRG 2 cut(s) 107, 1198
EcoICRI GAGCTC 1 cut(s) 80
EcoRI GAATTC 2 cut(s) 269, 1168
EcoRII CCWGG 5 cut(s) 384, 645, 682, 880, 1720
EcoT14I CCWWGG 2 cut(s) 677, 836
EcoT38I GRGCYC 2 cut(s) 82, 356
ErhI CCWWGG 2 cut(s) 677, 836
Esp3I CGTCTC 1 cut(s) 204
FaeI CATG 5 cut(s) 846, 907, 955, 1246, 1309
FalI AAGNNNNNCTT 2 cut(s) 1808, 1840
FaqI GGGAC 2 cut(s) 173, 811
FatI CATG 5 cut(s) 842, 903, 951, 1242, 1305
FblI GTMKAC 1 cut(s) 139
Fnu4HI GCNGC 3 cut(s) 589, 1226, 1776
FokI GGATG 9 cut(s) 490, 886, 1004, 1391, 1511, 1523, 1547, 1832, 1883
FriOI GRGCYC 2 cut(s) 82, 356
Fsp4HI GCNGC 3 cut(s) 589, 1226, 1776
FspBI CTAG 4 cut(s) 678, 837, 1932, 1938
GlaI GCGC 1 cut(s) 379
GluI GCNGC 3 cut(s) 589, 1226, 1776
GsaI CCCAGC 1 cut(s) 897
HaeII RGCGCY 1 cut(s) 381
HaeIII GGCC 6 cut(s) 682, 697, 1460, 1661, 1692, 1880
HapII CCGG 3 cut(s) 24, 313, 1433
HhaI GCGC 1 cut(s) 380
Hin1II CATG 5 cut(s) 846, 907, 955, 1246, 1309
Hin6I GCGC 1 cut(s) 378
HinP1I GCGC 1 cut(s) 378
HincII GTYRAC 1 cut(s) 1059
HindII GTYRAC 1 cut(s) 1059
HinfI GANTC 7 cut(s) 89, 1142, 1196, 1256, 1636, 1700, 1727
HpaII CCGG 3 cut(s) 24, 313, 1433
HphI GGTGA 6 cut(s) 278, 374, 437, 977, 1121, 1736
Hpy166II GTNNAC 7 cut(s) 140, 536, 704, 730, 949, 1059, 1289
Hpy188III TCNNGA 3 cut(s) 1086, 1364, 1868
Hpy8I GTNNAC 7 cut(s) 140, 536, 704, 730, 949, 1059, 1289
Hpy99I CGWCG 1 cut(s) 323
HpyAV CCTTC 3 cut(s) 4, 157, 1042
HpyCH4IV ACGT 6 cut(s) 290, 321, 538, 1096, 1291, 1750
HpyCH4V TGCA 4 cut(s) 216, 704, 1305, 1425
HpyF10VI GCNNNNNNNGC 3 cut(s) 222, 386, 928
HpyF3I CTNAG 6 cut(s) 66, 221, 605, 795, 1400, 1849
HpySE526I ACGT 6 cut(s) 290, 321, 538, 1096, 1291, 1750
Hsp92II CATG 5 cut(s) 846, 907, 955, 1246, 1309
HspAI GCGC 1 cut(s) 378
KpnI GGTACC 2 cut(s) 622, 1033
KspI CCGCGG 1 cut(s) 206
Kzo9I GATC 7 cut(s) 252, 304, 484, 628, 832, 1360, 1828
LguI GCTCTTC 1 cut(s) 1902
LmnI GCTCC 3 cut(s) 199, 1203, 1807
Lsp1109I GCAGC 2 cut(s) 1237, 1787
LweI GCATC 5 cut(s) 112, 234, 864, 1434, 1445
MaeI CTAG 4 cut(s) 678, 837, 1932, 1938
MaeII ACGT 6 cut(s) 290, 321, 538, 1096, 1291, 1750
MaeIII GTNAC 3 cut(s) 391, 1041, 1109
MalI GATC 7 cut(s) 254, 306, 486, 630, 834, 1362, 1830
MboI GATC 7 cut(s) 252, 304, 484, 628, 832, 1360, 1828
MfeI CAATTG 1 cut(s) 1229
MflI RGATCY 2 cut(s) 304, 484
MhlI GDGCHC 3 cut(s) 82, 356, 706
MlsI TGGCCA 1 cut(s) 1880
MluNI TGGCCA 1 cut(s) 1880
MlyI GAGTC 4 cut(s) 98, 1151, 1190, 1630
MmeI TCCRAC 4 cut(s) 234, 462, 1017, 1294
Mox20I TGGCCA 1 cut(s) 1880
MroXI GAANNNNTTC 1 cut(s) 744
MscI TGGCCA 1 cut(s) 1880
MseI TTAA 5 cut(s) 344, 518, 1395, 1616, 1857
MslI CAYNNNNRTG 2 cut(s) 131, 847
Msp20I TGGCCA 1 cut(s) 1880
MspA1I CMGCKG 1 cut(s) 205
MspI CCGG 3 cut(s) 24, 313, 1433
MspR9I CCNGG 6 cut(s) 24, 386, 647, 684, 882, 1722
MunI CAATTG 1 cut(s) 1229
MvaI CCWGG 5 cut(s) 386, 647, 684, 882, 1722
MvnI CGCG 1 cut(s) 205
MwoI GCNNNNNNNGC 3 cut(s) 222, 386, 928
NciI CCSGG 1 cut(s) 24
NdeII GATC 7 cut(s) 252, 304, 484, 628, 832, 1360, 1828
NlaIII CATG 5 cut(s) 846, 907, 955, 1246, 1309
NlaIV GGNNCC 4 cut(s) 455, 620, 827, 1031
NmeAIII GCCGAG 1 cut(s) 110
NmuCI GTSAC 2 cut(s) 391, 1109
PceI AGGCCT 2 cut(s) 682, 1460
PciSI GCTCTTC 1 cut(s) 1902
PdmI GAANNNNTTC 1 cut(s) 744
PfeI GAWTC 3 cut(s) 1256, 1700, 1727
PflMI CCANNNNNTGG 1 cut(s) 1721
PfoI TCCNGGA 1 cut(s) 880
PinAI ACCGGT 1 cut(s) 312
PkrI GCNGC 3 cut(s) 590, 1227, 1777
PleI GAGTC 4 cut(s) 97, 1150, 1190, 1630
PpsI GAGTC 4 cut(s) 97, 1150, 1190, 1630
Psp124BI GAGCTC 1 cut(s) 82
Psp6I CCWGG 5 cut(s) 384, 645, 682, 880, 1720
PspFI CCCAGC 1 cut(s) 893
PspGI CCWGG 5 cut(s) 384, 645, 682, 880, 1720
PspN4I GGNNCC 4 cut(s) 455, 620, 827, 1031
PspPI GGNCC 6 cut(s) 207, 649, 696, 825, 884, 1659
PsrI GAACNNNNNNTAC 2 cut(s) 395, 427
PsuI RGATCY 2 cut(s) 304, 484
RsaI GTAC 7 cut(s) 317, 563, 620, 1031, 1753, 1763, 1930
RsaNI GTAC 7 cut(s) 316, 562, 619, 1030, 1752, 1762, 1929
RseI CAYNNNNRTG 2 cut(s) 131, 847
SacI GAGCTC 1 cut(s) 82
SacII CCGCGG 1 cut(s) 206
SapI GCTCTTC 1 cut(s) 1902
SaqAI TTAA 5 cut(s) 344, 518, 1395, 1616, 1857
SatI GCNGC 3 cut(s) 589, 1226, 1776
Sau3AI GATC 7 cut(s) 252, 304, 484, 628, 832, 1360, 1828
Sau96I GGNCC 6 cut(s) 207, 649, 696, 825, 884, 1659
ScaI AGTACT 1 cut(s) 1930
SchI GAGTC 4 cut(s) 98, 1151, 1190, 1630
ScrFI CCNGG 6 cut(s) 24, 386, 647, 684, 882, 1722
SduI GDGCHC 3 cut(s) 82, 356, 706
SfaNI GCATC 5 cut(s) 112, 234, 864, 1434, 1445
SfcI CTRYAG 1 cut(s) 1236
Sfr303I CCGCGG 1 cut(s) 206
SgrBI CCGCGG 1 cut(s) 206
SinI GGWCC 4 cut(s) 207, 649, 825, 884
SmiMI CAYNNNNRTG 2 cut(s) 131, 847
SpeI ACTAGT 1 cut(s) 1931
SseBI AGGCCT 2 cut(s) 682, 1460
SsiI CCGC 5 cut(s) 203, 205, 365, 588, 1642
SspMI CTAG 4 cut(s) 678, 837, 1932, 1938
SstI GAGCTC 1 cut(s) 82
StuI AGGCCT 2 cut(s) 682, 1460
StyD4I CCNGG 6 cut(s) 22, 384, 645, 682, 880, 1720
StyI CCWWGG 2 cut(s) 677, 836
TaiI ACGT 6 cut(s) 293, 324, 541, 1099, 1294, 1753
TaqI TCGA 4 cut(s) 120, 350, 550, 1843
TaqII GACCGA 1 cut(s) 1565
TatI WGTACW 3 cut(s) 561, 1761, 1928
TauI GCSGC 1 cut(s) 591
TfiI GAWTC 3 cut(s) 1256, 1700, 1727
Tru1I TTAA 5 cut(s) 344, 518, 1395, 1616, 1857
Tru9I TTAA 5 cut(s) 344, 518, 1395, 1616, 1857
TscAI CASTG 3 cut(s) 706, 1380, 1804
TseFI GTSAC 2 cut(s) 391, 1109
TseI GCWGC 2 cut(s) 1225, 1775
Tsp45I GTSAC 2 cut(s) 391, 1109
TspGWI ACGGA 3 cut(s) 59, 186, 1060
TspRI CASTG 3 cut(s) 706, 1380, 1804
Van91I CCANNNNNTGG 1 cut(s) 1721
VneI GTGCAC 1 cut(s) 702
VpaK11BI GGWCC 4 cut(s) 207, 649, 825, 884
XapI RAATTY 3 cut(s) 269, 428, 1168
XmaJI CCTAGG 2 cut(s) 677, 836
XmiI GTMKAC 1 cut(s) 139
XmnI GAANNNNTTC 1 cut(s) 744
XspI CTAG 4 cut(s) 678, 837, 1932, 1938
ZrmI AGTACT 1 cut(s) 1930
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.