Kelch domain-containing protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G50310 |
| fragaria_vesca | FvH4_5g07300 FvH4_5g07300 FvH4_5g07300 FvH4_5g07300 |
| malus_domestica | MD06G1157400.v1.1 MD14G1164000.v1.1 |
| prunus_persica | Prupe.5G157400_v2.0.a1 Prupe.5G157400_v2.0.a1 |
| pyrus_communis | pycom06g14060 pycom14g13670 |
| rosa_chinensis | RchiOBHm_Chr6g0266051 RchiOBHm_Chr7g0191331 RchiOBHm_Chr7g0231611 |
| rosa_laevigata | RLG00000004465 |
| rosa_multiflora | Rmu_sc0004860.1_g000004 Rmu_sc0011522.1_g000001 |
| rosa_roxburghii | Rroxscaffold_3G00229050 Rroxscaffold_3G00263930 |
| rosa_rugosa | Rorug06G0510000 |
| rosa_samantha | Rh4DG264900 Rh7AG117300 Rh7BG119200 Rh7CG122300 Rh7DG120400 |
| rosa_wichuraiana | Rw1G001960 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 1029 |
| AccB1I | GGYRCC | 1 cut(s) | 1029 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1715 |
| AccI | GTMKAC | 1 cut(s) | 139 |
| AccII | CGCG | 1 cut(s) | 205 |
| AciI | CCGC | 4 cut(s) | 203, 588, 1620, 1636 |
| AclWI | GGATC | 4 cut(s) | 492, 827, 1368, 1588 |
| AcoI | YGGCCR | 2 cut(s) | 695, 1872 |
| AcsI | RAATTY | 3 cut(s) | 269, 428, 1168 |
| AcuI | CTGAAG | 3 cut(s) | 1485, 1851, 1920 |
| AdeI | CACNNNGTG | 1 cut(s) | 710 |
| AfaI | GTAC | 6 cut(s) | 317, 563, 1031, 1747, 1757, 1924 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 29, 178, 262, 542, 683, 893, 894, 1715 |
| AgeI | ACCGGT | 1 cut(s) | 312 |
| AgsI | TTSAA | 7 cut(s) | 238, 326, 351, 658, 719, 962, 1589 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 823 |
| AhlI | ACTAGT | 1 cut(s) | 1925 |
| AjnI | CCWGG | 6 cut(s) | 384, 395, 645, 682, 880, 1714 |
| Alw21I | GWGCWC | 4 cut(s) | 82, 382, 706, 1806 |
| Alw26I | GTCTC | 3 cut(s) | 81, 236, 1535 |
| Alw44I | GTGCAC | 1 cut(s) | 702 |
| AlwI | GGATC | 4 cut(s) | 492, 827, 1368, 1588 |
| Ama87I | CYCGRG | 1 cut(s) | 107 |
| AoxI | GGCC | 8 cut(s) | 680, 687, 695, 884, 1458, 1653, 1684, 1872 |
| ApaI | GGGCCC | 1 cut(s) | 888 |
| ApaLI | GTGCAC | 1 cut(s) | 702 |
| ApeKI | GCWGC | 2 cut(s) | 1225, 1769 |
| ApoI | RAATTY | 3 cut(s) | 269, 428, 1168 |
| AsiGI | ACCGGT | 1 cut(s) | 312 |
| Asp718I | GGTACC | 1 cut(s) | 1029 |
| AspA2I | CCTAGG | 2 cut(s) | 677, 836 |
| AspS9I | GGNCC | 6 cut(s) | 649, 687, 825, 884, 885, 1653 |
| AsuC2I | CCSGG | 1 cut(s) | 24 |
| AsuHPI | GGTGA | 7 cut(s) | 278, 374, 385, 437, 977, 1121, 1730 |
| AvaI | CYCGRG | 1 cut(s) | 107 |
| AvaII | GGWCC | 2 cut(s) | 649, 825 |
| AvrII | CCTAGG | 2 cut(s) | 677, 836 |
| BaeGI | GKGCMC | 2 cut(s) | 706, 888 |
| BalI | TGGCCA | 2 cut(s) | 697, 1874 |
| BanI | GGYRCC | 1 cut(s) | 1029 |
| BanII | GRGCYC | 3 cut(s) | 82, 888, 1806 |
| BbsI | GAAGAC | 1 cut(s) | 47 |
| Bbv12I | GWGCWC | 4 cut(s) | 82, 382, 706, 1806 |
| BbvCI | CCTCAGC | 1 cut(s) | 66 |
| BbvI | GCAGC | 2 cut(s) | 1237, 1781 |
| BccI | CCATC | 6 cut(s) | 465, 1029, 1100, 1208, 1342, 1808 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 104, 138 |
| BciT130I | CCWGG | 6 cut(s) | 386, 397, 647, 684, 882, 1716 |
| BciVI | GTATCC | 1 cut(s) | 1117 |
| BcnI | CCSGG | 1 cut(s) | 24 |
| BcoDI | GTCTC | 3 cut(s) | 81, 236, 1535 |
| BcuI | ACTAGT | 1 cut(s) | 1925 |
| BfaI | CTAG | 4 cut(s) | 678, 837, 1926, 1932 |
| BfmI | CTRYAG | 1 cut(s) | 1236 |
| BfuI | GTATCC | 1 cut(s) | 1117 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 883 |
| BglII | AGATCT | 1 cut(s) | 741 |
| BisI | GCNGC | 3 cut(s) | 589, 1226, 1770 |
| BlnI | CCTAGG | 2 cut(s) | 677, 836 |
| BlsI | GCNGC | 3 cut(s) | 590, 1227, 1771 |
| BmcAI | AGTACT | 1 cut(s) | 1924 |
| Bme1390I | CCNGG | 7 cut(s) | 24, 386, 397, 647, 684, 882, 1716 |
| Bme18I | GGWCC | 2 cut(s) | 649, 825 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 823 |
| BmeT110I | CYCGRG | 1 cut(s) | 107 |
| BmgT120I | GGNCC | 6 cut(s) | 649, 687, 825, 884, 885, 1653 |
| BmiI | GGNNCC | 6 cut(s) | 455, 688, 827, 886, 887, 1031 |
| BmrFI | CCNGG | 7 cut(s) | 24, 386, 397, 647, 684, 882, 1716 |
| BmrI | ACTGGG | 1 cut(s) | 511 |
| BmsI | GCATC | 4 cut(s) | 112, 864, 1434, 1445 |
| BmuI | ACTGGG | 1 cut(s) | 511 |
| BoxI | GACNNNNGTC | 1 cut(s) | 293 |
| BpiI | GAAGAC | 1 cut(s) | 47 |
| Bpu10I | CCTNAGC | 3 cut(s) | 66, 221, 541 |
| BpuMI | CCSGG | 1 cut(s) | 24 |
| Bsa29I | ATCGAT | 1 cut(s) | 120 |
| BsaJI | CCNNGG | 5 cut(s) | 108, 677, 683, 836, 881 |
| BsaWI | WCCGGW | 1 cut(s) | 312 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 517, 547 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 29, 178, 262, 542, 683, 893, 894, 1715 |
| Bse118I | RCCGGY | 2 cut(s) | 312, 1432 |
| Bse1I | ACTGG | 7 cut(s) | 506, 652, 1380, 1677, 1763, 1798, 1920 |
| BseBI | CCWGG | 6 cut(s) | 386, 397, 647, 684, 882, 1716 |
| BseCI | ATCGAT | 1 cut(s) | 120 |
| BseDI | CCNNGG | 5 cut(s) | 108, 677, 683, 836, 881 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 29, 178, 262, 542, 683, 893, 894, 1715 |
| BseMII | CTCAG | 6 cut(s) | 57, 125, 212, 555, 786, 1212 |
| BseNI | ACTGG | 7 cut(s) | 506, 652, 1380, 1677, 1763, 1798, 1920 |
| BseRI | GAGGAG | 4 cut(s) | 83, 360, 1154, 1553 |
| BseSI | GKGCMC | 2 cut(s) | 706, 888 |
| BseXI | GCAGC | 2 cut(s) | 1237, 1781 |
| BseYI | CCCAGC | 2 cut(s) | 190, 893 |
| BsgI | GTGCAG | 1 cut(s) | 199 |
| Bsh1236I | CGCG | 1 cut(s) | 205 |
| BshFI | GGCC | 8 cut(s) | 682, 689, 697, 886, 1460, 1655, 1686, 1874 |
| BshNI | GGYRCC | 1 cut(s) | 1029 |
| BshTI | ACCGGT | 1 cut(s) | 312 |
| BshVI | ATCGAT | 1 cut(s) | 120 |
| BsiHKAI | GWGCWC | 4 cut(s) | 82, 382, 706, 1806 |
| BsiHKCI | CYCGRG | 1 cut(s) | 107 |
| BsiSI | CCGG | 3 cut(s) | 24, 313, 1433 |
| BslFI | GGGAC | 2 cut(s) | 173, 811 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 29, 178, 262, 542, 683, 893, 894, 1715 |
| BsmAI | GTCTC | 3 cut(s) | 81, 236, 1535 |
| BsmFI | GGGAC | 2 cut(s) | 173, 811 |
| BsnI | GGCC | 8 cut(s) | 682, 689, 697, 886, 1460, 1655, 1686, 1874 |
| BsoBI | CYCGRG | 1 cut(s) | 107 |
| Bsp120I | GGGCCC | 1 cut(s) | 884 |
| Bsp1286I | GDGCHC | 5 cut(s) | 82, 382, 706, 888, 1806 |
| Bsp1407I | TGTACA | 1 cut(s) | 561 |
| Bsp143I | GATC | 7 cut(s) | 484, 628, 741, 832, 1360, 1580, 1822 |
| BspACI | CCGC | 4 cut(s) | 203, 588, 1620, 1636 |
| BspANI | GGCC | 8 cut(s) | 682, 689, 697, 886, 1460, 1655, 1686, 1874 |
| BspCNI | CTCAG | 6 cut(s) | 58, 126, 213, 554, 787, 1211 |
| BspDI | ATCGAT | 1 cut(s) | 120 |
| BspFNI | CGCG | 1 cut(s) | 205 |
| BspLI | GGNNCC | 6 cut(s) | 455, 688, 827, 886, 887, 1031 |
| BspPI | GGATC | 4 cut(s) | 492, 827, 1368, 1588 |
| BspQI | GCTCTTC | 1 cut(s) | 1896 |
| BspT107I | GGYRCC | 1 cut(s) | 1029 |
| BsrFI | RCCGGY | 2 cut(s) | 312, 1432 |
| BsrGI | TGTACA | 1 cut(s) | 561 |
| BsrI | ACTGG | 7 cut(s) | 506, 652, 1380, 1677, 1763, 1798, 1920 |
| BssAI | RCCGGY | 2 cut(s) | 312, 1432 |
| BssECI | CCNNGG | 5 cut(s) | 108, 677, 683, 836, 881 |
| BssMI | GATC | 7 cut(s) | 484, 628, 741, 832, 1360, 1580, 1822 |
| BssNAI | GTATAC | 1 cut(s) | 140 |
| BssT1I | CCWWGG | 2 cut(s) | 677, 836 |
| Bst1107I | GTATAC | 1 cut(s) | 140 |
| Bst2UI | CCWGG | 6 cut(s) | 386, 397, 647, 684, 882, 1716 |
| Bst6I | CTCTTC | 5 cut(s) | 68, 914, 1312, 1896, 1931 |
| BstAUI | TGTACA | 1 cut(s) | 561 |
| BstC8I | GCNNGC | 1 cut(s) | 82 |
| BstDEI | CTNAG | 8 cut(s) | 66, 134, 221, 541, 605, 795, 1198, 1400 |
| BstFNI | CGCG | 1 cut(s) | 205 |
| BstKTI | GATC | 7 cut(s) | 487, 631, 744, 835, 1363, 1583, 1825 |
| BstMAI | GTCTC | 3 cut(s) | 81, 236, 1535 |
| BstMBI | GATC | 7 cut(s) | 484, 628, 741, 832, 1360, 1580, 1822 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 222, 386, 883 |
| BstNI | CCWGG | 6 cut(s) | 386, 397, 647, 684, 882, 1716 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 293 |
| BstSCI | CCNGG | 7 cut(s) | 22, 384, 395, 645, 682, 880, 1714 |
| BstSFI | CTRYAG | 1 cut(s) | 1236 |
| BstSLI | GKGCMC | 2 cut(s) | 706, 888 |
| BstUI | CGCG | 1 cut(s) | 205 |
| BstV1I | GCAGC | 2 cut(s) | 1237, 1781 |
| BstV2I | GAAGAC | 1 cut(s) | 47 |
| BstX2I | RGATCY | 2 cut(s) | 484, 741 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1793 |
| BstYI | RGATCY | 2 cut(s) | 484, 741 |
| BstZ17I | GTATAC | 1 cut(s) | 140 |
| Bsu15I | ATCGAT | 1 cut(s) | 120 |
| BsuI | GTATCC | 1 cut(s) | 1117 |
| BsuRI | GGCC | 8 cut(s) | 682, 689, 697, 886, 1460, 1655, 1686, 1874 |
| BsuTUI | ATCGAT | 1 cut(s) | 120 |
| BtgZI | GCGATG | 2 cut(s) | 1007, 1422 |
| BtsIMutI | CAGTG | 3 cut(s) | 499, 1373, 1791 |
| Cac8I | GCNNGC | 1 cut(s) | 82 |
| Cfr10I | RCCGGY | 2 cut(s) | 312, 1432 |
| Cfr13I | GGNCC | 6 cut(s) | 649, 687, 825, 884, 885, 1653 |
| ClaI | ATCGAT | 1 cut(s) | 120 |
| CseI | GACGC | 1 cut(s) | 214 |
| Csp6I | GTAC | 6 cut(s) | 316, 562, 1030, 1746, 1756, 1923 |
| CspAI | ACCGGT | 1 cut(s) | 312 |
| CviAII | CATG | 7 cut(s) | 173, 691, 843, 904, 952, 1243, 1306 |
| CviQI | GTAC | 6 cut(s) | 316, 562, 1030, 1746, 1756, 1923 |
| DdeI | CTNAG | 8 cut(s) | 66, 134, 221, 541, 605, 795, 1198, 1400 |
| DpnI | GATC | 7 cut(s) | 486, 630, 743, 834, 1362, 1582, 1824 |
| DpnII | GATC | 7 cut(s) | 484, 628, 741, 832, 1360, 1580, 1822 |
| DraIII | CACNNNGTG | 1 cut(s) | 710 |
| DriI | GACNNNNNGTC | 1 cut(s) | 823 |
| EaeI | YGGCCR | 2 cut(s) | 695, 1872 |
| Eam1104I | CTCTTC | 5 cut(s) | 68, 914, 1312, 1896, 1931 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 823 |
| EarI | CTCTTC | 5 cut(s) | 68, 914, 1312, 1896, 1931 |
| Ecl136II | GAGCTC | 2 cut(s) | 80, 1804 |
| Eco130I | CCWWGG | 2 cut(s) | 677, 836 |
| Eco147I | AGGCCT | 2 cut(s) | 682, 1460 |
| Eco24I | GRGCYC | 3 cut(s) | 82, 888, 1806 |
| Eco47I | GGWCC | 2 cut(s) | 649, 825 |
| Eco53kI | GAGCTC | 2 cut(s) | 80, 1804 |
| Eco57I | CTGAAG | 3 cut(s) | 1485, 1851, 1920 |
| Eco88I | CYCGRG | 1 cut(s) | 107 |
| EcoICRI | GAGCTC | 2 cut(s) | 80, 1804 |
| EcoO109I | RGGNCCY | 1 cut(s) | 885 |
| EcoRI | GAATTC | 2 cut(s) | 269, 1168 |
| EcoRII | CCWGG | 6 cut(s) | 384, 395, 645, 682, 880, 1714 |
| EcoT14I | CCWWGG | 2 cut(s) | 677, 836 |
| EcoT38I | GRGCYC | 3 cut(s) | 82, 888, 1806 |
| ErhI | CCWWGG | 2 cut(s) | 677, 836 |
| FaeI | CATG | 7 cut(s) | 176, 694, 846, 907, 955, 1246, 1309 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1802, 1834 |
| FaqI | GGGAC | 2 cut(s) | 173, 811 |
| FatI | CATG | 7 cut(s) | 172, 690, 842, 903, 951, 1242, 1305 |
| FauI | CCCGC | 1 cut(s) | 1613 |
| FblI | GTMKAC | 1 cut(s) | 139 |
| Fnu4HI | GCNGC | 3 cut(s) | 589, 1226, 1770 |
| FriOI | GRGCYC | 3 cut(s) | 82, 888, 1806 |
| Fsp4HI | GCNGC | 3 cut(s) | 589, 1226, 1770 |
| FspBI | CTAG | 4 cut(s) | 678, 837, 1926, 1932 |
| GluI | GCNGC | 3 cut(s) | 589, 1226, 1770 |
| GsaI | CCCAGC | 2 cut(s) | 194, 897 |
| HaeIII | GGCC | 8 cut(s) | 682, 689, 697, 886, 1460, 1655, 1686, 1874 |
| HapII | CCGG | 3 cut(s) | 24, 313, 1433 |
| HgaI | GACGC | 1 cut(s) | 214 |
| Hin1II | CATG | 7 cut(s) | 176, 694, 846, 907, 955, 1246, 1309 |
| HincII | GTYRAC | 1 cut(s) | 1059 |
| HindII | GTYRAC | 1 cut(s) | 1059 |
| HinfI | GANTC | 7 cut(s) | 526, 1142, 1196, 1256, 1630, 1694, 1721 |
| HpaII | CCGG | 3 cut(s) | 24, 313, 1433 |
| HphI | GGTGA | 7 cut(s) | 278, 374, 385, 437, 977, 1121, 1730 |
| Hpy166II | GTNNAC | 8 cut(s) | 140, 365, 536, 704, 730, 949, 1059, 1289 |
| Hpy188I | TCNGA | 8 cut(s) | 781, 796, 817, 1174, 1261, 1447, 1465, 1693 |
| Hpy188III | TCNNGA | 4 cut(s) | 107, 1086, 1364, 1862 |
| Hpy8I | GTNNAC | 8 cut(s) | 140, 365, 536, 704, 730, 949, 1059, 1289 |
| HpyAV | CCTTC | 4 cut(s) | 157, 207, 1042, 1888 |
| HpyCH4IV | ACGT | 4 cut(s) | 290, 1096, 1291, 1744 |
| HpyCH4V | TGCA | 4 cut(s) | 216, 704, 1305, 1425 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 222, 386, 883 |
| HpyF3I | CTNAG | 8 cut(s) | 66, 134, 221, 541, 605, 795, 1198, 1400 |
| HpySE526I | ACGT | 4 cut(s) | 290, 1096, 1291, 1744 |
| Hsp92II | CATG | 7 cut(s) | 176, 694, 846, 907, 955, 1246, 1309 |
| KpnI | GGTACC | 1 cut(s) | 1033 |
| Kzo9I | GATC | 7 cut(s) | 484, 628, 741, 832, 1360, 1580, 1822 |
| LguI | GCTCTTC | 1 cut(s) | 1896 |
| LmnI | GCTCC | 5 cut(s) | 199, 1039, 1203, 1801, 1809 |
| Lsp1109I | GCAGC | 2 cut(s) | 1237, 1781 |
| LweI | GCATC | 4 cut(s) | 112, 864, 1434, 1445 |
| MaeI | CTAG | 4 cut(s) | 678, 837, 1926, 1932 |
| MaeII | ACGT | 4 cut(s) | 290, 1096, 1291, 1744 |
| MaeIII | GTNAC | 1 cut(s) | 391 |
| MalI | GATC | 7 cut(s) | 486, 630, 743, 834, 1362, 1582, 1824 |
| MboI | GATC | 7 cut(s) | 484, 628, 741, 832, 1360, 1580, 1822 |
| MflI | RGATCY | 2 cut(s) | 484, 741 |
| MhlI | GDGCHC | 5 cut(s) | 82, 382, 706, 888, 1806 |
| MlsI | TGGCCA | 2 cut(s) | 697, 1874 |
| MluNI | TGGCCA | 2 cut(s) | 697, 1874 |
| MlyI | GAGTC | 4 cut(s) | 535, 1151, 1190, 1624 |
| MmeI | TCCRAC | 3 cut(s) | 234, 462, 1294 |
| Mox20I | TGGCCA | 2 cut(s) | 697, 1874 |
| MscI | TGGCCA | 2 cut(s) | 697, 1874 |
| MseI | TTAA | 6 cut(s) | 251, 344, 518, 1395, 1610, 1851 |
| MslI | CAYNNNNRTG | 1 cut(s) | 847 |
| Msp20I | TGGCCA | 2 cut(s) | 697, 1874 |
| MspI | CCGG | 3 cut(s) | 24, 313, 1433 |
| MspR9I | CCNGG | 7 cut(s) | 24, 386, 397, 647, 684, 882, 1716 |
| MvaI | CCWGG | 6 cut(s) | 386, 397, 647, 684, 882, 1716 |
| MvnI | CGCG | 1 cut(s) | 205 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 222, 386, 883 |
| NciI | CCSGG | 1 cut(s) | 24 |
| NdeII | GATC | 7 cut(s) | 484, 628, 741, 832, 1360, 1580, 1822 |
| NlaIII | CATG | 7 cut(s) | 176, 694, 846, 907, 955, 1246, 1309 |
| NlaIV | GGNNCC | 6 cut(s) | 455, 688, 827, 886, 887, 1031 |
| NmuCI | GTSAC | 1 cut(s) | 391 |
| PceI | AGGCCT | 2 cut(s) | 682, 1460 |
| PciSI | GCTCTTC | 1 cut(s) | 1896 |
| PfeI | GAWTC | 3 cut(s) | 1256, 1694, 1721 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1715 |
| PinAI | ACCGGT | 1 cut(s) | 312 |
| PkrI | GCNGC | 3 cut(s) | 590, 1227, 1771 |
| PleI | GAGTC | 4 cut(s) | 534, 1150, 1190, 1624 |
| PpsI | GAGTC | 4 cut(s) | 534, 1150, 1190, 1624 |
| PshAI | GACNNNNGTC | 1 cut(s) | 293 |
| Psp124BI | GAGCTC | 2 cut(s) | 82, 1806 |
| Psp6I | CCWGG | 6 cut(s) | 384, 395, 645, 682, 880, 1714 |
| PspFI | CCCAGC | 2 cut(s) | 190, 893 |
| PspGI | CCWGG | 6 cut(s) | 384, 395, 645, 682, 880, 1714 |
| PspN4I | GGNNCC | 6 cut(s) | 455, 688, 827, 886, 887, 1031 |
| PspOMI | GGGCCC | 1 cut(s) | 884 |
| PspPI | GGNCC | 6 cut(s) | 649, 687, 825, 884, 885, 1653 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 395, 427 |
| PsuI | RGATCY | 2 cut(s) | 484, 741 |
| RsaI | GTAC | 6 cut(s) | 317, 563, 1031, 1747, 1757, 1924 |
| RsaNI | GTAC | 6 cut(s) | 316, 562, 1030, 1746, 1756, 1923 |
| RseI | CAYNNNNRTG | 1 cut(s) | 847 |
| SacI | GAGCTC | 2 cut(s) | 82, 1806 |
| SapI | GCTCTTC | 1 cut(s) | 1896 |
| SaqAI | TTAA | 6 cut(s) | 251, 344, 518, 1395, 1610, 1851 |
| SatI | GCNGC | 3 cut(s) | 589, 1226, 1770 |
| Sau3AI | GATC | 7 cut(s) | 484, 628, 741, 832, 1360, 1580, 1822 |
| Sau96I | GGNCC | 6 cut(s) | 649, 687, 825, 884, 885, 1653 |
| ScaI | AGTACT | 1 cut(s) | 1924 |
| SchI | GAGTC | 4 cut(s) | 535, 1151, 1190, 1624 |
| ScrFI | CCNGG | 7 cut(s) | 24, 386, 397, 647, 684, 882, 1716 |
| SduI | GDGCHC | 5 cut(s) | 82, 382, 706, 888, 1806 |
| SfaNI | GCATC | 4 cut(s) | 112, 864, 1434, 1445 |
| SfcI | CTRYAG | 1 cut(s) | 1236 |
| SinI | GGWCC | 2 cut(s) | 649, 825 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 847 |
| SpeI | ACTAGT | 1 cut(s) | 1925 |
| SseBI | AGGCCT | 2 cut(s) | 682, 1460 |
| SsiI | CCGC | 4 cut(s) | 203, 588, 1620, 1636 |
| SspMI | CTAG | 4 cut(s) | 678, 837, 1926, 1932 |
| SstI | GAGCTC | 2 cut(s) | 82, 1806 |
| StuI | AGGCCT | 2 cut(s) | 682, 1460 |
| StyD4I | CCNGG | 7 cut(s) | 22, 384, 395, 645, 682, 880, 1714 |
| StyI | CCWWGG | 2 cut(s) | 677, 836 |
| TaiI | ACGT | 4 cut(s) | 293, 1099, 1294, 1747 |
| TaqI | TCGA | 3 cut(s) | 120, 550, 1837 |
| TatI | WGTACW | 3 cut(s) | 561, 1755, 1922 |
| TauI | GCSGC | 1 cut(s) | 591 |
| TfiI | GAWTC | 3 cut(s) | 1256, 1694, 1721 |
| Tru1I | TTAA | 6 cut(s) | 251, 344, 518, 1395, 1610, 1851 |
| Tru9I | TTAA | 6 cut(s) | 251, 344, 518, 1395, 1610, 1851 |
| TscAI | CASTG | 3 cut(s) | 506, 1380, 1798 |
| TseFI | GTSAC | 1 cut(s) | 391 |
| TseI | GCWGC | 2 cut(s) | 1225, 1769 |
| Tsp45I | GTSAC | 1 cut(s) | 391 |
| TspDTI | ATGAA | 8 cut(s) | 800, 902, 1197, 1259, 1485, 1515, 1527, 1533 |
| TspGWI | ACGGA | 4 cut(s) | 59, 1060, 1575, 1796 |
| TspRI | CASTG | 3 cut(s) | 506, 1380, 1798 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1715 |
| VneI | GTGCAC | 1 cut(s) | 702 |
| VpaK11BI | GGWCC | 2 cut(s) | 649, 825 |
| XapI | RAATTY | 3 cut(s) | 269, 428, 1168 |
| XmaJI | CCTAGG | 2 cut(s) | 677, 836 |
| XmiI | GTMKAC | 1 cut(s) | 139 |
| XspI | CTAG | 4 cut(s) | 678, 837, 1926, 1932 |
| ZrmI | AGTACT | 1 cut(s) | 1924 |