Rroxscaffold_3G00263930

Kelch domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0006640
Physical Location & Seq
Forward (+)
57726567 .. 57734413
7847 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00263930.1

Sequence Viewer

Length: 1938 bp
ATGGGGAAGAAAGGGAAGAAGCCCGGAAAGGGAAAAGAGAAGACGGAGAAGAAAACAGCCAAAGCTGAGGAGAAGAGAGCTCGCAGAGACACCAAGAAGCTCTCTCCCGAGGACGACATCGATGCCATTTTGCTGAGTATACAAAAGGAGGAAGCCAAGAAGAAAGAAGTCCATGTTGAGGAAAATGTCCCAGCTCCTTCTCCGCGTTCCAACTGCACCCTGAGCGTCAATCCCTTGAAAGAGACAGAGTTAATCCTTTACGGGGGTGAATTCTACAATGGTAATAAGACGTTTGTCTATGGCGATTTTTACCGGTACGATGTTGAAAAGCAGGAATGGAAGTTAATTTCAAGCCCTAATAGTCCACCTCCTCGTAGTGCTCACCAGGCTGTCACCTGGAAGAACTATCTCTACATCTTCGGTGGTGAATTTACTTCCCCAAACCAAGAGAGGTTCCATCACTATAAGGACTTTTGGATGTTGGATATCAAAACAAATCAATGGGAACAGCTAAACTTAAAAGGGAGTCCAAGTCCACGCTCAGGTCATCGAATGGTATTGTACAAGCACAAGATTATTGTTTTTGGTGGCTTCTATGACACTCTAAGAGAAGTGAGGTATCATAATGATCTTTATGTATTTGACCTGGACCAGTTCAAGTGGCAAGAAATAACCCCTAGGCCTGGGGCCATGTGGCCAAGTGCACGAAGTGGCTTTCAATTTTTGTTTACCAAGATGAGATCTTTCTATATGGTGGCTATTCCAAAGAAGTTTCATCTGATAAAACCGGCTCTGAGAAAGGAATTGTTCATTCAGACTTATGGTCCCTTGATCCTAGGACATGGGAATGGAACAAGGTTTGATGCTTCCTATTGTAATTGCCATGTGGTAAAAAAAAGTGGGATGCCTCCTGGACCTCGTGCTGGGTTTTCCATGTGTGTTCATAAGAAGCGAGCTTTGCTATTTGGGGGTGTAGTGGACATGGAAGTTCAAGGTGATGTAATGATGAGCTTATTCTTGGACGAACTTTATGGCTTCCAATTAGACAACCATCGCTGTTCCGGACGAAAACGTAATAATGATGGTGATGATAAAATAGATACAACTGAACAAGAGGAGTCTAAAGAAAATGGCAAAGATGAGAATTCTGAATACGATGAAGAAGTAGGTGACTCGGGGAGCAAAATTGATGGTATATCACAGCAAATGGCTACAGCCATGAGTGTTGATGATTCTGATTTAACAGAGATAGTGAAGCCTTGTGGACGTATCAATTCCTGCATGGTTGTTGGAAGAGATACATTATATGTTTATGGAGGAATGATGGAGGTCAAGGATCAAGAAATTACACTGGATGACTTGTATTCTCTTAATCTTAGCAAACTTGATGAGTGGAAGTGCATCATACCGGCATCACAATCTGAATGGGTTGAGGCCTCTGAAGATGAAGATGAGGATGAGGATGAGGACGAGGATGAAGATGAGGATGAAGATGAAGATGAGGATGAAGATGAGGAGACTGATGATGATAATGACGGAGAGAGTGGTAAAGGTGGATCTCTTCAAATGGGGGAAGCTGTTGCTTTAATCAAGGGCGGGGGAAAGACTCTGCGGAGGAAAGAGAAACGGGCCAGAATAGAGCAGATTCGAGCCAGTCTTGGCCTTTCGGATTCGCAAAGAACCCCAATGCCTGGTGAATCTTTGAGAGATTTCTACAAACGTACAAATATGTACTGGCAAATGGCAGCCCACGAACATACCCAACACACTGGAAAGGAGCTCCGTAAGGATGGCTTTGATCTTGCTGAAGCTCGATACACAGAGCTTAAACCAATTCTGGACGAGTTGGCCATATTAGAGGCAGAGCAGAAGGCTGAAGAGCAAGAAGCTGAAACCAGTACTAGTGCTAGGAAGAGGGGCAAGAAAAGTGTGCTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4110 Kelch_3 Kelch_4 Kelch_5

Protein Analysis

645

Amino Acids

73.75

Weight (kDa)

5.19

Isoelectric Point (pI)

49.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Kelch_KLHDC2_KLHL20_DRC7 PF24681 41 - 246 8e-37 KLHDC2/KLHL20/DRC7 Kelch-repeats domain
Beta-prop_FBX42 PF13415 57 - 145 1.7e-13 FBX42, beta-propeller domain
Beta-prop_FBX42 PF13415 81 - 240 9.5e-33 FBX42, beta-propeller domain
Beta-prop_Calicin PF13964 85 - 224 9.8e-06 Calicin, beta-propeller domain
Beta-prop_ATRN-LZTR1 PF24981 86 - 174 4.8e-15 Attractin/LZTR1 beta-propeller
NANM PF24996 102 - 225 3.3e-10 N-acetylneuraminate epimerase
Kelch_FKB95 PF25210 110 - 230 8.2e-07 FKB95, Kelch-repeats domain
Beta-prop_ATRN-LZTR1 PF24981 155 - 228 3.5e-14 Attractin/LZTR1 beta-propeller
Kelch_1 PF01344 179 - 226 2.6e-06 Kelch motif
DUF4110 PF13422 554 - 638 1e-29 Domain of unknown function (DUF4110)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1691
AccI GTMKAC 1 cut(s) 139
AccII CGCG 1 cut(s) 205
AccIII TCCGGA 1 cut(s) 1061
AciI CCGC 3 cut(s) 203, 1596, 1612
AclWI GGATC 3 cut(s) 826, 1344, 1564
AcoI YGGCCR 2 cut(s) 695, 1848
AcsI RAATTY 3 cut(s) 269, 428, 1144
AcuI CTGAAG 3 cut(s) 1461, 1827, 1896
AdeI CACNNNGTG 1 cut(s) 710
AfaI GTAC 5 cut(s) 317, 563, 1723, 1733, 1900
AfiI CCNNNNNNNGG 7 cut(s) 29, 178, 262, 542, 683, 923, 1691
AgeI ACCGGT 1 cut(s) 312
AgsI TTSAA 7 cut(s) 238, 326, 351, 658, 719, 992, 1565
AhdI GACNNNNNGTC 1 cut(s) 822
AhlI ACTAGT 1 cut(s) 1901
AjnI CCWGG 6 cut(s) 384, 395, 645, 682, 910, 1690
Alw21I GWGCWC 4 cut(s) 82, 382, 706, 1782
Alw26I GTCTC 3 cut(s) 81, 236, 1511
Alw44I GTGCAC 1 cut(s) 702
AlwI GGATC 3 cut(s) 826, 1344, 1564
Ama87I CYCGRG 2 cut(s) 107, 1174
Aor13HI TCCGGA 1 cut(s) 1061
AoxI GGCC 7 cut(s) 680, 687, 695, 1434, 1629, 1660, 1848
ApaLI GTGCAC 1 cut(s) 702
ApeKI GCWGC 1 cut(s) 1745
ApoI RAATTY 3 cut(s) 269, 428, 1144
AsiGI ACCGGT 1 cut(s) 312
AspA2I CCTAGG 2 cut(s) 677, 835
AspS9I GGNCC 5 cut(s) 649, 687, 824, 914, 1629
AsuC2I CCSGG 1 cut(s) 24
AsuHPI GGTGA 8 cut(s) 278, 374, 385, 437, 1007, 1097, 1181, 1706
AvaI CYCGRG 2 cut(s) 107, 1174
AvaII GGWCC 3 cut(s) 649, 824, 914
AvrII CCTAGG 2 cut(s) 677, 835
BaeGI GKGCMC 1 cut(s) 706
BalI TGGCCA 2 cut(s) 697, 1850
BanII GRGCYC 2 cut(s) 82, 1782
BauI CACGAG 1 cut(s) 918
BbsI GAAGAC 1 cut(s) 47
Bbv12I GWGCWC 4 cut(s) 82, 382, 706, 1782
BbvCI CCTCAGC 1 cut(s) 66
BbvI GCAGC 1 cut(s) 1757
BccI CCATC 6 cut(s) 465, 1059, 1076, 1184, 1318, 1784
BcgI CGANNNNNNTGC 2 cut(s) 104, 138
BciT130I CCWGG 6 cut(s) 386, 397, 647, 684, 912, 1692
BcnI CCSGG 1 cut(s) 24
BcoDI GTCTC 3 cut(s) 81, 236, 1511
BcuI ACTAGT 1 cut(s) 1901
BfaI CTAG 4 cut(s) 678, 836, 1902, 1908
BfmI CTRYAG 1 cut(s) 1212
BglII AGATCT 1 cut(s) 740
BisI GCNGC 1 cut(s) 1746
BlnI CCTAGG 2 cut(s) 677, 835
BlsI GCNGC 1 cut(s) 1747
BmcAI AGTACT 1 cut(s) 1900
Bme1390I CCNGG 7 cut(s) 24, 386, 397, 647, 684, 912, 1692
Bme18I GGWCC 3 cut(s) 649, 824, 914
BmeRI GACNNNNNGTC 1 cut(s) 822
BmeT110I CYCGRG 2 cut(s) 107, 1174
BmgT120I GGNCC 5 cut(s) 649, 687, 824, 914, 1629
BmiI GGNNCC 3 cut(s) 455, 688, 826
BmrFI CCNGG 7 cut(s) 24, 386, 397, 647, 684, 912, 1692
BmsI GCATC 5 cut(s) 112, 853, 894, 1410, 1421
BoxI GACNNNNGTC 1 cut(s) 293
BpiI GAAGAC 1 cut(s) 47
Bpu10I CCTNAGC 3 cut(s) 66, 221, 541
BpuMI CCSGG 1 cut(s) 24
Bsa29I ATCGAT 1 cut(s) 120
BsaJI CCNNGG 4 cut(s) 108, 677, 683, 835
BsaWI WCCGGW 2 cut(s) 312, 1061
BsaXI ACNNNNNCTCC 2 cut(s) 517, 547
Bsc4I CCNNNNNNNGG 7 cut(s) 29, 178, 262, 542, 683, 923, 1691
Bse118I RCCGGY 3 cut(s) 312, 787, 1408
Bse1I ACTGG 6 cut(s) 652, 1356, 1653, 1739, 1774, 1896
BseAI TCCGGA 1 cut(s) 1061
BseBI CCWGG 6 cut(s) 386, 397, 647, 684, 912, 1692
BseCI ATCGAT 1 cut(s) 120
BseDI CCNNGG 4 cut(s) 108, 677, 683, 835
BseGI GGATG 9 cut(s) 483, 909, 1360, 1462, 1468, 1480, 1492, 1510, 1795
BseLI CCNNNNNNNGG 7 cut(s) 29, 178, 262, 542, 683, 923, 1691
BseMII CTCAG 5 cut(s) 57, 125, 212, 555, 785
BseNI ACTGG 6 cut(s) 652, 1356, 1653, 1739, 1774, 1896
BseRI GAGGAG 4 cut(s) 83, 360, 1130, 1529
BseSI GKGCMC 1 cut(s) 706
BseXI GCAGC 1 cut(s) 1757
BseYI CCCAGC 2 cut(s) 190, 923
BsgI GTGCAG 1 cut(s) 199
Bsh1236I CGCG 1 cut(s) 205
BshFI GGCC 7 cut(s) 682, 689, 697, 1436, 1631, 1662, 1850
BshTI ACCGGT 1 cut(s) 312
BshVI ATCGAT 1 cut(s) 120
BsiHKAI GWGCWC 4 cut(s) 82, 382, 706, 1782
BsiHKCI CYCGRG 2 cut(s) 107, 1174
BsiSI CCGG 5 cut(s) 24, 313, 788, 1062, 1409
BslFI GGGAC 2 cut(s) 173, 810
BslI CCNNNNNNNGG 7 cut(s) 29, 178, 262, 542, 683, 923, 1691
BsmAI GTCTC 3 cut(s) 81, 236, 1511
BsmFI GGGAC 2 cut(s) 173, 810
BsnI GGCC 7 cut(s) 682, 689, 697, 1436, 1631, 1662, 1850
BsoBI CYCGRG 2 cut(s) 107, 1174
Bsp1286I GDGCHC 4 cut(s) 82, 382, 706, 1782
Bsp13I TCCGGA 1 cut(s) 1061
Bsp1407I TGTACA 1 cut(s) 561
Bsp143I GATC 6 cut(s) 628, 740, 831, 1336, 1556, 1798
BspACI CCGC 3 cut(s) 203, 1596, 1612
BspANI GGCC 7 cut(s) 682, 689, 697, 1436, 1631, 1662, 1850
BspCNI CTCAG 5 cut(s) 58, 126, 213, 554, 786
BspDI ATCGAT 1 cut(s) 120
BspEI TCCGGA 1 cut(s) 1061
BspFNI CGCG 1 cut(s) 205
BspLI GGNNCC 3 cut(s) 455, 688, 826
BspPI GGATC 3 cut(s) 826, 1344, 1564
BspQI GCTCTTC 1 cut(s) 1872
BsrFI RCCGGY 3 cut(s) 312, 787, 1408
BsrGI TGTACA 1 cut(s) 561
BsrI ACTGG 6 cut(s) 652, 1356, 1653, 1739, 1774, 1896
BssAI RCCGGY 3 cut(s) 312, 787, 1408
BssECI CCNNGG 4 cut(s) 108, 677, 683, 835
BssMI GATC 6 cut(s) 628, 740, 831, 1336, 1556, 1798
BssNAI GTATAC 1 cut(s) 140
BssSI CACGAG 1 cut(s) 918
BssT1I CCWWGG 2 cut(s) 677, 835
Bst1107I GTATAC 1 cut(s) 140
Bst2BI CACGAG 1 cut(s) 918
Bst2UI CCWGG 6 cut(s) 386, 397, 647, 684, 912, 1692
Bst6I CTCTTC 5 cut(s) 68, 1288, 1566, 1872, 1907
BstAUI TGTACA 1 cut(s) 561
BstC8I GCNNGC 2 cut(s) 82, 954
BstDEI CTNAG 7 cut(s) 66, 134, 221, 541, 605, 794, 1376
BstF5I GGATG 9 cut(s) 483, 909, 1360, 1462, 1468, 1480, 1492, 1510, 1795
BstFNI CGCG 1 cut(s) 205
BstKTI GATC 6 cut(s) 631, 743, 834, 1339, 1559, 1801
BstMAI GTCTC 3 cut(s) 81, 236, 1511
BstMBI GATC 6 cut(s) 628, 740, 831, 1336, 1556, 1798
BstMWI GCNNNNNNNGC 3 cut(s) 222, 386, 958
BstNI CCWGG 6 cut(s) 386, 397, 647, 684, 912, 1692
BstPAI GACNNNNGTC 1 cut(s) 293
BstSCI CCNGG 7 cut(s) 22, 384, 395, 645, 682, 910, 1690
BstSFI CTRYAG 1 cut(s) 1212
BstSLI GKGCMC 1 cut(s) 706
BstUI CGCG 1 cut(s) 205
BstV1I GCAGC 1 cut(s) 1757
BstV2I GAAGAC 1 cut(s) 47
BstX2I RGATCY 2 cut(s) 740, 1556
BstXI CCANNNNNNTGG 1 cut(s) 1769
BstYI RGATCY 2 cut(s) 740, 1556
BstZ17I GTATAC 1 cut(s) 140
Bsu15I ATCGAT 1 cut(s) 120
BsuRI GGCC 7 cut(s) 682, 689, 697, 1436, 1631, 1662, 1850
BsuTUI ATCGAT 1 cut(s) 120
BtgZI GCGATG 1 cut(s) 1037
BtsCI GGATG 9 cut(s) 483, 909, 1360, 1462, 1468, 1480, 1492, 1510, 1795
BtsIMutI CAGTG 2 cut(s) 1349, 1767
Cac8I GCNNGC 2 cut(s) 82, 954
Cfr10I RCCGGY 3 cut(s) 312, 787, 1408
Cfr13I GGNCC 5 cut(s) 649, 687, 824, 914, 1629
ClaI ATCGAT 1 cut(s) 120
CseI GACGC 1 cut(s) 214
Csp6I GTAC 5 cut(s) 316, 562, 1722, 1732, 1899
CspAI ACCGGT 1 cut(s) 312
CviAII CATG 8 cut(s) 173, 691, 842, 884, 934, 982, 1219, 1282
CviQI GTAC 5 cut(s) 316, 562, 1722, 1732, 1899
DdeI CTNAG 7 cut(s) 66, 134, 221, 541, 605, 794, 1376
DpnI GATC 6 cut(s) 630, 742, 833, 1338, 1558, 1800
DpnII GATC 6 cut(s) 628, 740, 831, 1336, 1556, 1798
DraIII CACNNNGTG 1 cut(s) 710
DriI GACNNNNNGTC 1 cut(s) 822
EaeI YGGCCR 2 cut(s) 695, 1848
Eam1104I CTCTTC 5 cut(s) 68, 1288, 1566, 1872, 1907
Eam1105I GACNNNNNGTC 1 cut(s) 822
EarI CTCTTC 5 cut(s) 68, 1288, 1566, 1872, 1907
Ecl136II GAGCTC 2 cut(s) 80, 1780
Eco130I CCWWGG 2 cut(s) 677, 835
Eco147I AGGCCT 2 cut(s) 682, 1436
Eco24I GRGCYC 2 cut(s) 82, 1782
Eco32I GATATC 1 cut(s) 487
Eco47I GGWCC 3 cut(s) 649, 824, 914
Eco53kI GAGCTC 2 cut(s) 80, 1780
Eco57I CTGAAG 3 cut(s) 1461, 1827, 1896
Eco88I CYCGRG 2 cut(s) 107, 1174
EcoICRI GAGCTC 2 cut(s) 80, 1780
EcoRI GAATTC 2 cut(s) 269, 1144
EcoRII CCWGG 6 cut(s) 384, 395, 645, 682, 910, 1690
EcoRV GATATC 1 cut(s) 487
EcoT14I CCWWGG 2 cut(s) 677, 835
EcoT38I GRGCYC 2 cut(s) 82, 1782
ErhI CCWWGG 2 cut(s) 677, 835
FaeI CATG 8 cut(s) 176, 694, 845, 887, 937, 985, 1222, 1285
FalI AAGNNNNNCTT 2 cut(s) 1778, 1810
FaqI GGGAC 2 cut(s) 173, 810
FatI CATG 8 cut(s) 172, 690, 841, 883, 933, 981, 1218, 1281
FauI CCCGC 1 cut(s) 1589
FblI GTMKAC 1 cut(s) 139
Fnu4HI GCNGC 1 cut(s) 1746
FokI GGATG 9 cut(s) 490, 916, 1367, 1469, 1475, 1487, 1499, 1517, 1802
FriOI GRGCYC 2 cut(s) 82, 1782
Fsp4HI GCNGC 1 cut(s) 1746
FspBI CTAG 4 cut(s) 678, 836, 1902, 1908
GluI GCNGC 1 cut(s) 1746
GsaI CCCAGC 2 cut(s) 194, 927
HaeIII GGCC 7 cut(s) 682, 689, 697, 1436, 1631, 1662, 1850
HapII CCGG 5 cut(s) 24, 313, 788, 1062, 1409
HgaI GACGC 1 cut(s) 214
Hin1II CATG 8 cut(s) 176, 694, 845, 887, 937, 985, 1222, 1285
HinfI GANTC 8 cut(s) 526, 1118, 1172, 1232, 1606, 1645, 1670, 1697
HpaII CCGG 5 cut(s) 24, 313, 788, 1062, 1409
HphI GGTGA 8 cut(s) 278, 374, 385, 437, 1007, 1097, 1181, 1706
Hpy166II GTNNAC 7 cut(s) 140, 365, 536, 704, 729, 979, 1265
Hpy188I TCNGA 8 cut(s) 780, 795, 816, 1150, 1237, 1423, 1441, 1669
Hpy188III TCNNGA 4 cut(s) 107, 1062, 1340, 1838
Hpy8I GTNNAC 7 cut(s) 140, 365, 536, 704, 729, 979, 1265
HpyAV CCTTC 2 cut(s) 207, 1864
HpyCH4IV ACGT 4 cut(s) 290, 1072, 1267, 1720
HpyCH4V TGCA 4 cut(s) 216, 704, 1281, 1401
HpyF10VI GCNNNNNNNGC 3 cut(s) 222, 386, 958
HpyF3I CTNAG 7 cut(s) 66, 134, 221, 541, 605, 794, 1376
HpySE526I ACGT 4 cut(s) 290, 1072, 1267, 1720
Hsp92II CATG 8 cut(s) 176, 694, 845, 887, 937, 985, 1222, 1285
Kpn2I TCCGGA 1 cut(s) 1061
Kzo9I GATC 6 cut(s) 628, 740, 831, 1336, 1556, 1798
LguI GCTCTTC 1 cut(s) 1872
LmnI GCTCC 4 cut(s) 199, 1179, 1777, 1785
Lsp1109I GCAGC 1 cut(s) 1757
LweI GCATC 5 cut(s) 112, 853, 894, 1410, 1421
MaeI CTAG 4 cut(s) 678, 836, 1902, 1908
MaeII ACGT 4 cut(s) 290, 1072, 1267, 1720
MaeIII GTNAC 2 cut(s) 391, 1169
MalI GATC 6 cut(s) 630, 742, 833, 1338, 1558, 1800
MboI GATC 6 cut(s) 628, 740, 831, 1336, 1556, 1798
MflI RGATCY 2 cut(s) 740, 1556
MhlI GDGCHC 4 cut(s) 82, 382, 706, 1782
MlsI TGGCCA 2 cut(s) 697, 1850
MluNI TGGCCA 2 cut(s) 697, 1850
MlyI GAGTC 4 cut(s) 535, 1127, 1166, 1600
MmeI TCCRAC 3 cut(s) 234, 462, 1270
Mox20I TGGCCA 2 cut(s) 697, 1850
MroI TCCGGA 1 cut(s) 1061
MscI TGGCCA 2 cut(s) 697, 1850
MseI TTAA 7 cut(s) 251, 344, 518, 1241, 1371, 1586, 1827
MslI CAYNNNNRTG 1 cut(s) 846
Msp20I TGGCCA 2 cut(s) 697, 1850
MspI CCGG 5 cut(s) 24, 313, 788, 1062, 1409
MspR9I CCNGG 7 cut(s) 24, 386, 397, 647, 684, 912, 1692
MvaI CCWGG 6 cut(s) 386, 397, 647, 684, 912, 1692
MvnI CGCG 1 cut(s) 205
MwoI GCNNNNNNNGC 3 cut(s) 222, 386, 958
NciI CCSGG 1 cut(s) 24
NdeII GATC 6 cut(s) 628, 740, 831, 1336, 1556, 1798
NlaIII CATG 8 cut(s) 176, 694, 845, 887, 937, 985, 1222, 1285
NlaIV GGNNCC 3 cut(s) 455, 688, 826
NmuCI GTSAC 2 cut(s) 391, 1169
PceI AGGCCT 2 cut(s) 682, 1436
PciSI GCTCTTC 1 cut(s) 1872
PfeI GAWTC 4 cut(s) 1232, 1645, 1670, 1697
PflMI CCANNNNNTGG 1 cut(s) 1691
PfoI TCCNGGA 1 cut(s) 910
PinAI ACCGGT 1 cut(s) 312
PkrI GCNGC 1 cut(s) 1747
PleI GAGTC 4 cut(s) 534, 1126, 1166, 1600
PpsI GAGTC 4 cut(s) 534, 1126, 1166, 1600
PshAI GACNNNNGTC 1 cut(s) 293
Psp124BI GAGCTC 2 cut(s) 82, 1782
Psp6I CCWGG 6 cut(s) 384, 395, 645, 682, 910, 1690
PspFI CCCAGC 2 cut(s) 190, 923
PspGI CCWGG 6 cut(s) 384, 395, 645, 682, 910, 1690
PspN4I GGNNCC 3 cut(s) 455, 688, 826
PspPI GGNCC 5 cut(s) 649, 687, 824, 914, 1629
PsrI GAACNNNNNNTAC 2 cut(s) 395, 427
PsuI RGATCY 2 cut(s) 740, 1556
RsaI GTAC 5 cut(s) 317, 563, 1723, 1733, 1900
RsaNI GTAC 5 cut(s) 316, 562, 1722, 1732, 1899
RseI CAYNNNNRTG 1 cut(s) 846
SacI GAGCTC 2 cut(s) 82, 1782
SapI GCTCTTC 1 cut(s) 1872
SaqAI TTAA 7 cut(s) 251, 344, 518, 1241, 1371, 1586, 1827
SatI GCNGC 1 cut(s) 1746
Sau3AI GATC 6 cut(s) 628, 740, 831, 1336, 1556, 1798
Sau96I GGNCC 5 cut(s) 649, 687, 824, 914, 1629
ScaI AGTACT 1 cut(s) 1900
SchI GAGTC 4 cut(s) 535, 1127, 1166, 1600
ScrFI CCNGG 7 cut(s) 24, 386, 397, 647, 684, 912, 1692
SduI GDGCHC 4 cut(s) 82, 382, 706, 1782
SfaNI GCATC 5 cut(s) 112, 853, 894, 1410, 1421
SfcI CTRYAG 1 cut(s) 1212
SinI GGWCC 3 cut(s) 649, 824, 914
SmiMI CAYNNNNRTG 1 cut(s) 846
SpeI ACTAGT 1 cut(s) 1901
SseBI AGGCCT 2 cut(s) 682, 1436
SsiI CCGC 3 cut(s) 203, 1596, 1612
SspMI CTAG 4 cut(s) 678, 836, 1902, 1908
SstI GAGCTC 2 cut(s) 82, 1782
StuI AGGCCT 2 cut(s) 682, 1436
StyD4I CCNGG 7 cut(s) 22, 384, 395, 645, 682, 910, 1690
StyI CCWWGG 2 cut(s) 677, 835
TaiI ACGT 4 cut(s) 293, 1075, 1270, 1723
TaqI TCGA 4 cut(s) 120, 550, 1648, 1813
TatI WGTACW 3 cut(s) 561, 1731, 1898
TfiI GAWTC 4 cut(s) 1232, 1645, 1670, 1697
Tru1I TTAA 7 cut(s) 251, 344, 518, 1241, 1371, 1586, 1827
Tru9I TTAA 7 cut(s) 251, 344, 518, 1241, 1371, 1586, 1827
TscAI CASTG 2 cut(s) 1356, 1774
TseFI GTSAC 2 cut(s) 391, 1169
TseI GCWGC 1 cut(s) 1745
Tsp45I GTSAC 2 cut(s) 391, 1169
TspDTI ATGAA 9 cut(s) 764, 799, 932, 1173, 1461, 1491, 1503, 1509, 1521
TspGWI ACGGA 3 cut(s) 59, 1551, 1772
TspRI CASTG 2 cut(s) 1356, 1774
Van91I CCANNNNNTGG 1 cut(s) 1691
VneI GTGCAC 1 cut(s) 702
VpaK11BI GGWCC 3 cut(s) 649, 824, 914
XapI RAATTY 3 cut(s) 269, 428, 1144
XmaJI CCTAGG 2 cut(s) 677, 835
XmiI GTMKAC 1 cut(s) 139
XspI CTAG 4 cut(s) 678, 836, 1902, 1908
ZrmI AGTACT 1 cut(s) 1900
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.