Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0008506

Physical Location & Seq

Genomic Coordinates Forward (+)

4623439 .. 4630542

Gene Structure 7104 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g07980.t3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2694 bp

ATGCAGTTAGGGGTTTTGGGAGGTTTATCACTCTACCACTCCATATACTCGCCTGCCGTGCCAGCTCAAATGGCCGCCCTCGGAGCTCTCTCCCCCTGCCCCTATACTCTCCTCTCCCGCCTCAAGTCTTCACACCGCTCCGTTTCCTGCTCCCTCGGCTCTTCCACTGCTCCTTCAACAGGCACGCGTGGGTCTGGTTATAAAAGATCAGGGAGAGTGGAGGGGCCTCGGAAAAGTATGGAAGATTCTGTTCAGAGGAAGATGGAGCAGTTTTATGAAGGGAGAGATGGCCCGCCGCTCCGTGTTTTGCCTATAGGTGGATTGGGAGAAATTGGGATGAATTGCATGCTTGTTGGGAATTATGATCGATATATACTCATTGATGCCGGTATCATGTTTCCAGACTTCGATGAACTTGGAGTCCAGAAGATTATACCCGATACCACATTTATCAGGAAATGGAAACACAAAATTGAAGCAATTGTTATTACGCATGGCCATGAAGATCACATTGGTGCGTTGCCTTGGGTGATCCCAGCTTTGGATCCCAGTACACCAATATTTGCATCATCCTTCACCATGGAGCTTATTAGAAAACGTCTGAAGGAACATGGGATTTTTGTTCCGTCTCGACTCAAGATGTTCAAAACAAAGAGGAAATTTATGGCCGGGCCATTTGAAATTGAACCGGTCCGAGTGACACATTCTATTCCTGACTGTTGTGGATTAGTTCTTCGATGTGCTGATGGTACAATTCTTCATACTGGGGACTGGAAGATTGATGAGTCACCACTGGATGGTCAAGGTTTTGATCGTGAAGGTTTGGAAGAACTTTCAAAAGAAGGAGTAACACTGATGATGAGTGACTCTACAAATGTTCTCTCACCTGGAAGGACAACAAGTGAATCCTCTGTGGCAGATGCACTGATGAGGCATATTTCAGCAGCTCAAGGGAGGGTTATTACTACCCAGTTTGCTTCAAACATACATCGACTTGGAAGTGTGAAAGCTGCTGCTGATGCTACTGGTAGAAAGTTGGTATTTGTTGGTATGTCCTTAAGGACATATCTTGATGCAGCTTGGAGGGATGGGAAGGCACCAATTGACCCATCAACCCTGGTGAAAGTGGAAGATATTGATTCCTATGCGCCAAAGGATTTGCTAATAGTCACAACTGGCTCTCAAGCAGAACCTCGTGCGGCGCTAAATCTTGCATCATTTGGAGGTAGTCATTCTGTCAAACTGACCAAGGAAGATATAATTTTATATTCTGCTAAGGTGATTCCTGGTAACGAATCTCGGGTGATGAAAATGTTAAACCGCATATCAGATATGGGGTCAACAATAGTGATGGGTAAAAACGAGGGGCTGCACACTTCTGGTCATGGTTACCGTGGGGAGCTGGAGGAAGTGCTTAGAATTGTGAAGCCGCAGCACTTTTTGCCCATACATGGAGAGCTCTTGTTTCTCAAAGAGCATGAATTGCTCGGGAGATCAACCGGCATCCATCACACCACTGTGATAAAGAACGGGGAAATGCTTGGGGTTTCTCATTTGAGAAATAGAAGGGTACTTTCGAATGGTTTCACCTTGCTTGGAAAGGAGAATTTGCAGTTGAAATATAGCGATGGTGATAAAGCATTTGGTACATCAAGTGAACTTTGTGTTGATGAGAGACTAAAAATTGCCTTAGATGGCATAATAGTGGTCAGCATGGAAATTTTACGCCCCCAAAATGTAAATGGTCTGGCTGAAAGTAGCATAAAAGGAAAGATAAGGATTACTACCCGATGTTTGTGGCTTGACAAAGGAAAGCTATATGATGCACTCTATAAAGCTGCCCATGCTGCACTGTCAAGCTGCCCCATTAATTGTCCTTTACCTCACATGGAAAGAACAGTGTCCGAAGTATTAAGGAAATTGGTTAGGAAATATAGTGGTAAAAGGCCAGATGTTATTGCTATTGCCATGGAGAACCCCACAGCAGTTCTTGCTGATGAGGTCAGTACTAGACTATCCGGAAAGTCCCATGTTGGTTATGAGAGGTCAGCTTTGCGAAAAGTAAATGATGGAAATTCAAACAAGAGTCGGTCAACTAGGACAGAATCAGATGAAGCCAAGGACAACATAGAGCTGCAGAGCAGCACGACAGAGAAAGATTTTGAAGATGATGGTGTCGAAGTCAAAGCACCATTACCTGTGGAAGTTTCCACTAGTTCAAATGTCAATCCCGAAAACGTTTCTTCTGATACAGAGGAGCCCAATGATATCTGGAATGCAATGGTGAAGTTGTCAGCTGGTGACAAATTAGCAGAAGATAAAAATGATTTGGTTCTGCAAGAGGAAAATCTAAAGAAAGATGATCCTGAAAGCACAGAAAGAACAAGTCCTTCAAAGCCCGTGAAACGGAACAAATGGAAGCCCGAGGAGGTTAAAAAGTTCATCAAAATGCGTGGGAAACTACATAGCAGATTTCAAGTTGTGAAGGGGAGAATGGCACTGTGGGAAGAAATATCTAGAAACTTGTTGGCTGAGGGGGTCAATAGAAGCCCTGGTCAATGCAAATCTTTGTGGGCATCTTTGGTTCAGAAATACGAGGAAAGCAAGAGTGGAAAGAGGAGCCAAAAGAGTTGGCCATATTATGAGGAAATGGATGGAGCTTTGTCTGATTCAGAGGCAATGGCAACAAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000578 GO:0003006 GO:0003674 GO:0003824 GO:0004518 GO:0004519 GO:0004527 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0006810 GO:0006996 GO:0007275 GO:0007389 GO:0008150 GO:0008152 GO:0008409 GO:0009314 GO:0009416 GO:0009507 GO:0009536 GO:0009628 GO:0009657 GO:0009658 GO:0009790 GO:0009791 GO:0009793 GO:0009798 GO:0009880 GO:0009914 GO:0009942 GO:0009987 GO:0010154 GO:0010817 GO:0016043 GO:0016787 GO:0016788 GO:0022414 GO:0032501 GO:0032502 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050896 GO:0051179 GO:0051234 GO:0060918 GO:0061458 GO:0065007 GO:0065008 GO:0071704 GO:0071840 GO:0090304 GO:0090305 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Lactamase_B Lactamase_B_2 Myb_DNA-bind_4 RMMBL

Protein Analysis

898

Amino Acids

98.99

Weight (kDa)

8.65

Isoelectric Point (pI)

43.88

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Lactamase_B	PF00753	114 - 257	1.8e-07	Metallo-beta-lactamase superfamily
Lactamase_B_2	PF12706	123 - 259	5.3e-10	Beta-lactamase superfamily domain
RNase_J_b_CASP	PF22505	317 - 442	1.4e-29	Ribonuclease J, beta-CASP domain
RMMBL	PF07521	457 - 503	5.6e-07	Zn-dependent metallo-hydrolase RNA specificity domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008506)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G63420
fragaria_vesca	FvH4_5g07980 FvH4_5g07980 FvH4_5g07980 FvH4_5g07980
malus_domestica	MD06G1143600.v1.1 MD14G1158900.v1.1
prunus_persica	Prupe.5G152800_v2.0.a1 Prupe.5G152800_v2.0.a1 Prupe.5G152800_v2.0.a1
pyrus_communis	pycom06g13330 pycom14g13250
rosa_chinensis	RchiOBHm_Chr7g0190431
rosa_laevigata	RLG00000004533
rosa_multiflora	Rmu_ssc0000036.1_g000001
rosa_roxburghii	Rroxscaffold_3G00264630
rosa_rugosa	Rorug06G0504700 Rorug06G0504700
rosa_samantha	Rh7AG110500 Rh7BG113100 Rh7CG115300
rosa_wichuraiana	Rw0G019850 Rw7G009590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	201
AccB1I	GGYRCC	1 cut(s)	1096
AccB7I	CCANNNNNTGG	1 cut(s)	797
AccBSI	CCGCTC	2 cut(s)	138, 298
AccII	CGCG	1 cut(s)	187
AccIII	TCCGGA	1 cut(s)	2018
AciI	CCGC	8 cut(s)	75, 118, 136, 293, 296, 1199, 1321, 1430
AclI	AACGTT	1 cut(s)	2238
AclWI	GGATC	4 cut(s)	526, 539, 552, 2357
AcoI	YGGCCR	4 cut(s)	72, 496, 666, 2633
AcsI	RAATTY	4 cut(s)	659, 1606, 1719, 2074
AcuI	CTGAAG	1 cut(s)	623
AfaI	GTAC	5 cut(s)	553, 751, 1572, 1648, 2008
AfiI	CCNNNNNNNGG	6 cut(s)	179, 317, 541, 797, 1451, 2406
AflII	CTTAAG	1 cut(s)	1057
AflIII	ACRYGT	1 cut(s)	185
AgeI	ACCGGT	1 cut(s)	688
AhlI	ACTAGT	1 cut(s)	2213
AjnI	CCWGG	4 cut(s)	886, 1116, 1285, 2551
AjuI	GAANNNNNNNTTGG	2 cut(s)	495, 527
AleI	CACNNNNGTG	2 cut(s)	513, 1517
AloI	GAACNNNNNNTCC	2 cut(s)	405, 437
Alw21I	GWGCWC	2 cut(s)	88, 1461
Alw26I	GTCTC	2 cut(s)	633, 1669
AlwI	GGATC	4 cut(s)	526, 539, 552, 2357
Ama87I	CYCGRG	3 cut(s)	1299, 1487, 2423
Aor13HI	TCCGGA	1 cut(s)	2018
AoxI	GGCC	8 cut(s)	72, 224, 289, 496, 666, 671, 1946, 2633
ApoI	RAATTY	4 cut(s)	659, 1606, 1719, 2074
AseI	ATTAAT	1 cut(s)	1869
AsiGI	ACCGGT	1 cut(s)	688
Asp700I	GAANNNNTTC	1 cut(s)	1583
AspLEI	GCGC	2 cut(s)	1150, 1204
AspS9I	GGNCC	4 cut(s)	224, 290, 671, 691
AsuC2I	CCSGG	1 cut(s)	670
AsuII	TTCGAA	1 cut(s)	1577
AvaI	CYCGRG	3 cut(s)	1299, 1487, 2423
AvaII	GGWCC	1 cut(s)	691
BalI	TGGCCA	2 cut(s)	498, 2635
BamHI	GGATCC	1 cut(s)	544
BanI	GGYRCC	1 cut(s)	1096
BanII	GRGCYC	3 cut(s)	88, 1461, 2262
BauI	CACGAG	1 cut(s)	1194
BbsI	GAAGAC	1 cut(s)	120
Bbv12I	GWGCWC	2 cut(s)	88, 1461
BbvCI	CCTCAGC	1 cut(s)	2532
BceAI	ACGGC	1 cut(s)	41
BciT130I	CCWGG	4 cut(s)	888, 1118, 1287, 2553
BcnI	CCSGG	1 cut(s)	670
BcoDI	GTCTC	2 cut(s)	633, 1669
BcuI	ACTAGT	1 cut(s)	2213
BfaI	CTAG	4 cut(s)	2010, 2097, 2214, 2517
BfmI	CTRYAG	2 cut(s)	312, 2135
BfoI	RGCGCY	1 cut(s)	1205
BfrI	CTTAAG	1 cut(s)	1057
BmcAI	AGTACT	1 cut(s)	2008
Bme1390I	CCNGG	5 cut(s)	670, 888, 1118, 1287, 2553
Bme18I	GGWCC	1 cut(s)	691
BmeT110I	CYCGRG	3 cut(s)	1299, 1487, 2423
BmgT120I	GGNCC	4 cut(s)	224, 290, 671, 691
BmiI	GGNNCC	5 cut(s)	225, 546, 1098, 2259, 2621
BmrFI	CCNGG	5 cut(s)	670, 888, 1118, 1287, 2553
BmrI	ACTGGG	3 cut(s)	543, 774, 964
BmsI	GCATC	9 cut(s)	373, 575, 910, 1009, 1063, 1223, 1512, 1813, 2585
BmuI	ACTGGG	3 cut(s)	543, 774, 964
BpiI	GAAGAC	1 cut(s)	120
BpmI	CTGGAG	1 cut(s)	1424
Bpu10I	CCTNAGC	2 cut(s)	1275, 2532
Bpu14I	TTCGAA	1 cut(s)	1577
BpuEI	CTTGAG	4 cut(s)	107, 620, 933, 1167
BpuMI	CCSGG	1 cut(s)	670
Bsa29I	ATCGAT	1 cut(s)	367
BsaWI	WCCGGW	2 cut(s)	688, 2018
Bsc4I	CCNNNNNNNGG	6 cut(s)	179, 317, 541, 797, 1451, 2406
Bse118I	RCCGGY	3 cut(s)	386, 688, 1499
Bse1I	ACTGG	7 cut(s)	549, 769, 776, 798, 970, 1030, 1180
Bse3DI	GCAATG	2 cut(s)	2286, 2685
BseAI	TCCGGA	1 cut(s)	2018
BseBI	CCWGG	4 cut(s)	888, 1118, 1287, 2553
BseCI	ATCGAT	1 cut(s)	367
BseGI	GGATG	6 cut(s)	342, 569, 802, 1093, 1503, 2659
BseLI	CCNNNNNNNGG	6 cut(s)	179, 317, 541, 797, 1451, 2406
BseMI	GCAATG	2 cut(s)	2286, 2685
BseMII	CTCAG	1 cut(s)	2523
BseNI	ACTGG	7 cut(s)	549, 769, 776, 798, 970, 1030, 1180
BseRI	GAGGAG	4 cut(s)	101, 2270, 2441, 2632
BseYI	CCCAGC	1 cut(s)	535
BsgI	GTGCAG	2 cut(s)	1355, 1833
Bsh1236I	CGCG	1 cut(s)	187
BshFI	GGCC	8 cut(s)	74, 226, 291, 498, 668, 673, 1948, 2635
BshNI	GGYRCC	1 cut(s)	1096
BshTI	ACCGGT	1 cut(s)	688
BshVI	ATCGAT	1 cut(s)	367
BsiHKAI	GWGCWC	2 cut(s)	88, 1461
BsiHKCI	CYCGRG	3 cut(s)	1299, 1487, 2423
BsiSI	CCGG	5 cut(s)	387, 669, 689, 1500, 2019
BslFI	GGGAC	2 cut(s)	782, 2011
BslI	CCNNNNNNNGG	6 cut(s)	179, 317, 541, 797, 1451, 2406
BsmAI	GTCTC	2 cut(s)	633, 1669
BsmBI	CGTCTC	1 cut(s)	633
BsmFI	GGGAC	2 cut(s)	782, 2011
BsmI	GAATGC	1 cut(s)	2281
BsnI	GGCC	8 cut(s)	74, 226, 291, 498, 668, 673, 1948, 2635
BsoBI	CYCGRG	3 cut(s)	1299, 1487, 2423
Bsp119I	TTCGAA	1 cut(s)	1577
Bsp1286I	GDGCHC	3 cut(s)	88, 1461, 2262
Bsp13I	TCCGGA	1 cut(s)	2018
Bsp143I	GATC	8 cut(s)	206, 364, 505, 531, 544, 811, 1493, 2362
Bsp19I	CCATGG	2 cut(s)	579, 1968
BspACI	CCGC	8 cut(s)	75, 118, 136, 293, 296, 1199, 1321, 1430
BspANI	GGCC	8 cut(s)	74, 226, 291, 498, 668, 673, 1948, 2635
BspCNI	CTCAG	1 cut(s)	2524
BspDI	ATCGAT	1 cut(s)	367
BspEI	TCCGGA	1 cut(s)	2018
BspFNI	CGCG	1 cut(s)	187
BspLI	GGNNCC	5 cut(s)	225, 546, 1098, 2259, 2621
BspMAI	CTGCAG	1 cut(s)	2139
BspPI	GGATC	4 cut(s)	526, 539, 552, 2357
BspQI	GCTCTTC	1 cut(s)	166
BspT104I	TTCGAA	1 cut(s)	1577
BspT107I	GGYRCC	1 cut(s)	1096
BspTI	CTTAAG	1 cut(s)	1057
BsrBI	CCGCTC	2 cut(s)	138, 298
BsrDI	GCAATG	2 cut(s)	2286, 2685
BsrFI	RCCGGY	3 cut(s)	386, 688, 1499
BsrI	ACTGG	7 cut(s)	549, 769, 776, 798, 970, 1030, 1180
BssAI	RCCGGY	3 cut(s)	386, 688, 1499
BssMI	GATC	8 cut(s)	206, 364, 505, 531, 544, 811, 1493, 2362
BssSI	CACGAG	1 cut(s)	1194
BssT1I	CCWWGG	5 cut(s)	524, 579, 1248, 1968, 2118
Bst2BI	CACGAG	1 cut(s)	1194
Bst2UI	CCWGG	4 cut(s)	888, 1118, 1287, 2553
Bst4CI	ACNGT	6 cut(s)	719, 1394, 1519, 1854, 1900, 2502
Bst6I	CTCTTC	1 cut(s)	166
BstAFI	CTTAAG	1 cut(s)	1057
BstAPI	GCANNNNNTGC	3 cut(s)	1441, 1483, 1991
BstBI	TTCGAA	1 cut(s)	1577
BstC8I	GCNNGC	5 cut(s)	54, 63, 185, 293, 347
BstDEI	CTNAG	4 cut(s)	1275, 1415, 1690, 2532
BstDSI	CCRYGG	3 cut(s)	579, 1393, 1968
BstEII	GGTNACC	1 cut(s)	1388
BstENI	CCTNNNNNAGG	1 cut(s)	177
BstF5I	GGATG	6 cut(s)	342, 569, 802, 1093, 1503, 2659
BstFNI	CGCG	1 cut(s)	187
BstH2I	RGCGCY	1 cut(s)	1205
BstHHI	GCGC	2 cut(s)	1150, 1204
BstKTI	GATC	8 cut(s)	209, 367, 508, 534, 547, 814, 1496, 2365
BstMAI	GTCTC	2 cut(s)	633, 1669
BstMBI	GATC	8 cut(s)	206, 364, 505, 531, 544, 811, 1493, 2362
BstNI	CCWGG	4 cut(s)	888, 1118, 1287, 2553
BstNSI	RCATGY	1 cut(s)	349
BstPI	GGTNACC	1 cut(s)	1388
BstSCI	CCNGG	5 cut(s)	668, 886, 1116, 1285, 2551
BstSFI	CTRYAG	2 cut(s)	312, 2135
BstUI	CGCG	1 cut(s)	187
BstV2I	GAAGAC	1 cut(s)	120
BstX2I	RGATCY	1 cut(s)	544
BstYI	RGATCY	1 cut(s)	544
Bsu15I	ATCGAT	1 cut(s)	367
BsuRI	GGCC	8 cut(s)	74, 226, 291, 498, 668, 673, 1948, 2635
BsuTUI	ATCGAT	1 cut(s)	367
BtgI	CCRYGG	3 cut(s)	579, 1393, 1968
BtgZI	GCGATG	1 cut(s)	1641
BtsCI	GGATG	6 cut(s)	342, 569, 802, 1093, 1503, 2659
BtsI	GCAGTG	1 cut(s)	165
BtsIMutI	CAGTG	8 cut(s)	165, 791, 851, 923, 1515, 1850, 1905, 2498
Cac8I	GCNNGC	5 cut(s)	54, 63, 185, 293, 347
CfoI	GCGC	2 cut(s)	1150, 1204
Cfr10I	RCCGGY	3 cut(s)	386, 688, 1499
Cfr13I	GGNCC	4 cut(s)	224, 290, 671, 691
ClaI	ATCGAT	1 cut(s)	367
CpoI	CGGWCCG	1 cut(s)	691
Csp6I	GTAC	5 cut(s)	552, 750, 1571, 1647, 2007
CspAI	ACCGGT	1 cut(s)	688
CspCI	CAANNNNNGTGG	2 cut(s)	2434, 2469
CspI	CGGWCCG	1 cut(s)	691
CviQI	GTAC	5 cut(s)	552, 750, 1571, 1647, 2007
DdeI	CTNAG	4 cut(s)	1275, 1415, 1690, 2532
DpnI	GATC	8 cut(s)	208, 366, 507, 533, 546, 813, 1495, 2364
DpnII	GATC	8 cut(s)	206, 364, 505, 531, 544, 811, 1493, 2362
EaeI	YGGCCR	4 cut(s)	72, 496, 666, 2633
Eam1104I	CTCTTC	1 cut(s)	166
EarI	CTCTTC	1 cut(s)	166
Ecl136II	GAGCTC	2 cut(s)	86, 1459
Eco130I	CCWWGG	5 cut(s)	524, 579, 1248, 1968, 2118
Eco24I	GRGCYC	3 cut(s)	88, 1461, 2262
Eco32I	GATATC	1 cut(s)	2269
Eco47I	GGWCC	1 cut(s)	691
Eco53kI	GAGCTC	2 cut(s)	86, 1459
Eco57I	CTGAAG	1 cut(s)	623
Eco88I	CYCGRG	3 cut(s)	1299, 1487, 2423
Eco91I	GGTNACC	1 cut(s)	1388
EcoICRI	GAGCTC	2 cut(s)	86, 1459
EcoNI	CCTNNNNNAGG	1 cut(s)	177
EcoO109I	RGGNCCY	1 cut(s)	224
EcoO65I	GGTNACC	1 cut(s)	1388
EcoRII	CCWGG	4 cut(s)	886, 1116, 1285, 2551
EcoRV	GATATC	1 cut(s)	2269
EcoT14I	CCWWGG	5 cut(s)	524, 579, 1248, 1968, 2118
EcoT38I	GRGCYC	3 cut(s)	88, 1461, 2262
ErhI	CCWWGG	5 cut(s)	524, 579, 1248, 1968, 2118
Esp3I	CGTCTC	1 cut(s)	633
FaqI	GGGAC	2 cut(s)	782, 2011
FauI	CCCGC	2 cut(s)	125, 300
FokI	GGATG	6 cut(s)	349, 556, 809, 1100, 1490, 2666
FriOI	GRGCYC	3 cut(s)	88, 1461, 2262
FspBI	CTAG	4 cut(s)	2010, 2097, 2214, 2517
GlaI	GCGC	2 cut(s)	1149, 1203
GsaI	CCCAGC	1 cut(s)	539
GsuI	CTGGAG	1 cut(s)	1424
HaeII	RGCGCY	1 cut(s)	1205
HaeIII	GGCC	8 cut(s)	74, 226, 291, 498, 668, 673, 1948, 2635
HapII	CCGG	5 cut(s)	387, 669, 689, 1500, 2019
HhaI	GCGC	2 cut(s)	1150, 1204
Hin6I	GCGC	2 cut(s)	1148, 1202
HinP1I	GCGC	2 cut(s)	1148, 1202
HincII	GTYRAC	2 cut(s)	1341, 2094
HindII	GTYRAC	2 cut(s)	1341, 2094
HpaII	CCGG	5 cut(s)	387, 669, 689, 1500, 2019
Hpy166II	GTNNAC	4 cut(s)	554, 1341, 1658, 2094
Hpy8I	GTNNAC	4 cut(s)	554, 1341, 1658, 2094
HpyCH4III	ACNGT	6 cut(s)	719, 1394, 1519, 1854, 1900, 2502
HpyCH4IV	ACGT	2 cut(s)	598, 2238
HpyF3I	CTNAG	4 cut(s)	1275, 1415, 1690, 2532
HpySE526I	ACGT	2 cut(s)	598, 2238
HspAI	GCGC	2 cut(s)	1148, 1202
Kpn2I	TCCGGA	1 cut(s)	2018
Kzo9I	GATC	8 cut(s)	206, 364, 505, 531, 544, 811, 1493, 2362
LguI	GCTCTTC	1 cut(s)	166
LweI	GCATC	9 cut(s)	373, 575, 910, 1009, 1063, 1223, 1512, 1813, 2585
MaeI	CTAG	4 cut(s)	2010, 2097, 2214, 2517
MaeII	ACGT	2 cut(s)	598, 2238
MaeIII	GTNAC	8 cut(s)	697, 786, 847, 863, 1168, 1289, 1388, 2300
MalI	GATC	8 cut(s)	208, 366, 507, 533, 546, 813, 1495, 2364
MbiI	CCGCTC	2 cut(s)	138, 298
MboI	GATC	8 cut(s)	206, 364, 505, 531, 544, 811, 1493, 2362
MfeI	CAATTG	2 cut(s)	480, 1101
MflI	RGATCY	1 cut(s)	544
MhlI	GDGCHC	3 cut(s)	88, 1461, 2262
MlsI	TGGCCA	2 cut(s)	498, 2635
MluI	ACGCGT	1 cut(s)	185
MluNI	TGGCCA	2 cut(s)	498, 2635
MlyI	GAGTC	5 cut(s)	429, 627, 794, 860, 2095
Mox20I	TGGCCA	2 cut(s)	498, 2635
MroI	TCCGGA	1 cut(s)	2018
MroXI	GAANNNNTTC	1 cut(s)	1583
MscI	TGGCCA	2 cut(s)	498, 2635
MseI	TTAA	5 cut(s)	1058, 1316, 1869, 1913, 2433
MslI	CAYNNNNRTG	5 cut(s)	498, 513, 1517, 1703, 2447
Msp20I	TGGCCA	2 cut(s)	498, 2635
MspA1I	CMGCKG	1 cut(s)	2297
MspCI	CTTAAG	1 cut(s)	1057
MspI	CCGG	5 cut(s)	387, 669, 689, 1500, 2019
MspR9I	CCNGG	5 cut(s)	670, 888, 1118, 1287, 2553
MunI	CAATTG	2 cut(s)	480, 1101
Mva1269I	GAATGC	1 cut(s)	2281
MvaI	CCWGG	4 cut(s)	888, 1118, 1287, 2553
MvnI	CGCG	1 cut(s)	187
NciI	CCSGG	1 cut(s)	670
NcoI	CCATGG	2 cut(s)	579, 1968
NdeII	GATC	8 cut(s)	206, 364, 505, 531, 544, 811, 1493, 2362
NlaIV	GGNNCC	5 cut(s)	225, 546, 1098, 2259, 2621
NmeAIII	GCCGAG	1 cut(s)	135
NmuCI	GTSAC	5 cut(s)	697, 786, 863, 1168, 2300
NspI	RCATGY	1 cut(s)	349
NspV	TTCGAA	1 cut(s)	1577
OliI	CACNNNNGTG	2 cut(s)	513, 1517
PaeI	GCATGC	1 cut(s)	349
PciSI	GCTCTTC	1 cut(s)	166
PctI	GAATGC	1 cut(s)	2281
PdmI	GAANNNNTTC	1 cut(s)	1583
PfeI	GAWTC	7 cut(s)	245, 905, 1139, 1282, 1295, 2105, 2669
PflMI	CCANNNNNTGG	1 cut(s)	797
PinAI	ACCGGT	1 cut(s)	688
PleI	GAGTC	5 cut(s)	428, 627, 793, 860, 2094
PpsI	GAGTC	5 cut(s)	428, 627, 793, 860, 2094
PshBI	ATTAAT	1 cut(s)	1869
PsiI	TTATAA	1 cut(s)	201
Psp124BI	GAGCTC	2 cut(s)	88, 1461
Psp1406I	AACGTT	1 cut(s)	2238
Psp6I	CCWGG	4 cut(s)	886, 1116, 1285, 2551
PspEI	GGTNACC	1 cut(s)	1388
PspFI	CCCAGC	1 cut(s)	535
PspGI	CCWGG	4 cut(s)	886, 1116, 1285, 2551
PspN4I	GGNNCC	5 cut(s)	225, 546, 1098, 2259, 2621
PspPI	GGNCC	4 cut(s)	224, 290, 671, 691
PstI	CTGCAG	1 cut(s)	2139
PsuI	RGATCY	1 cut(s)	544
PvuII	CAGCTG	1 cut(s)	2297
RsaI	GTAC	5 cut(s)	553, 751, 1572, 1648, 2008
RsaNI	GTAC	5 cut(s)	552, 750, 1571, 1647, 2007
RseI	CAYNNNNRTG	5 cut(s)	498, 513, 1517, 1703, 2447
Rsr2I	CGGWCCG	1 cut(s)	691
RsrII	CGGWCCG	1 cut(s)	691
SacI	GAGCTC	2 cut(s)	88, 1461
SapI	GCTCTTC	1 cut(s)	166
SaqAI	TTAA	5 cut(s)	1058, 1316, 1869, 1913, 2433
Sau3AI	GATC	8 cut(s)	206, 364, 505, 531, 544, 811, 1493, 2362
Sau96I	GGNCC	4 cut(s)	224, 290, 671, 691
ScaI	AGTACT	1 cut(s)	2008
SchI	GAGTC	5 cut(s)	429, 627, 794, 860, 2095
ScrFI	CCNGG	5 cut(s)	670, 888, 1118, 1287, 2553
SduI	GDGCHC	3 cut(s)	88, 1461, 2262
SfaNI	GCATC	9 cut(s)	373, 575, 910, 1009, 1063, 1223, 1512, 1813, 2585
SfcI	CTRYAG	2 cut(s)	312, 2135
SfuI	TTCGAA	1 cut(s)	1577
SinI	GGWCC	1 cut(s)	691
SmiMI	CAYNNNNRTG	5 cut(s)	498, 513, 1517, 1703, 2447
SmlI	CTYRAG	5 cut(s)	122, 635, 948, 1057, 1182
SmoI	CTYRAG	5 cut(s)	122, 635, 948, 1057, 1182
SpeI	ACTAGT	1 cut(s)	2213
SphI	GCATGC	1 cut(s)	349
SsiI	CCGC	8 cut(s)	75, 118, 136, 293, 296, 1199, 1321, 1430
SspI	AATATT	1 cut(s)	561
SspMI	CTAG	4 cut(s)	2010, 2097, 2214, 2517
SstI	GAGCTC	2 cut(s)	88, 1461
StyD4I	CCNGG	5 cut(s)	668, 886, 1116, 1285, 2551
StyI	CCWWGG	5 cut(s)	524, 579, 1248, 1968, 2118
TaaI	ACNGT	6 cut(s)	719, 1394, 1519, 1854, 1900, 2502
TaiI	ACGT	2 cut(s)	601, 2241
TaqI	TCGA	7 cut(s)	367, 408, 631, 736, 991, 1577, 2178
TaqII	GACCGA	1 cut(s)	2079
TatI	WGTACW	2 cut(s)	551, 2006
TauI	GCSGC	4 cut(s)	77, 298, 1202, 1432
TfiI	GAWTC	7 cut(s)	245, 905, 1139, 1282, 1295, 2105, 2669
Tru1I	TTAA	5 cut(s)	1058, 1316, 1869, 1913, 2433
Tru9I	TTAA	5 cut(s)	1058, 1316, 1869, 1913, 2433
TscAI	CASTG	8 cut(s)	172, 798, 858, 930, 1522, 1857, 1905, 2505
TseFI	GTSAC	5 cut(s)	697, 786, 863, 1168, 2300
Tsp45I	GTSAC	5 cut(s)	697, 786, 863, 1168, 2300
TspDTI	ATGAA	9 cut(s)	291, 353, 426, 516, 749, 1322, 1494, 2127, 2431
TspGWI	ACGGA	4 cut(s)	130, 290, 615, 2422
TspRI	CASTG	8 cut(s)	172, 798, 858, 930, 1522, 1857, 1905, 2505
Van91I	CCANNNNNTGG	1 cut(s)	797
Vha464I	CTTAAG	1 cut(s)	1057
VpaK11BI	GGWCC	1 cut(s)	691
VspI	ATTAAT	1 cut(s)	1869
XagI	CCTNNNNNAGG	1 cut(s)	177
XapI	RAATTY	4 cut(s)	659, 1606, 1719, 2074
XbaI	TCTAGA	1 cut(s)	2516
XceI	RCATGY	1 cut(s)	349
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1739
XmnI	GAANNNNTTC	1 cut(s)	1583
XspI	CTAG	4 cut(s)	2010, 2097, 2214, 2517
ZrmI	AGTACT	1 cut(s)	2008

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.