Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0008506

Physical Location & Seq

Genomic Coordinates Forward (+)

60082503 .. 60090290

Gene Structure 7788 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000004533

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2763 bp

ATGGGCGATGGCCGTGCTTGTCTTTCAAAGGTTTCGTTTCGCCGTTTCGACTACCCGAAAACCTCGAAACTGATGCAATTAGGGGTTTTGGGAGGTTTATCTCTCTACCACTCCATATACTCACCTCCGTTGCCAACTCAAATGGCCGCCGTCGGAGCTCTCTCGCCGTTCCCCTACAGCCTCCTCTGGCGGCCCAAGCCTTCGAACCGCACCGTTTCGTGCTCCGTCGGCTCTTCTACTGCTCCTACAGGCACGCGTGGGTCTAACTATAAAAGATCAGGAAGAGTGGAGGGGCCTCGGAAAAGTATGGAAGACTCTGTTCAGAGAAAGATGGAGCAGTTTTATGAAGGGAGAGATGGTCCACCACTCCGTGTTTTGCCAATCGGTGGACTGGGAGAAATTGGGATGAATTGCATGCTGGTTGGGAATTATGATCGATATATACTGATTGATGCCGGTATCATGTTTCCAGACTTCGATGAACTTGGAGTCCAAAAGATAATACCTGATACGACATTTATCAGAAAATGGAAACACAAAATTGAAGCAATTGTCATTACACATGGCCATGAAGATCACATTGGTGCGTTGCCTTGGGTGATCCCAGCTTTGGATCCCAGTACACCAATATTTGCATCATCCTTCACCATGGAGCTTATTAGGAAACGTCTGAAGGAAAATGGGATTTTTGTTCCATCCAGACTTAAGATGTTCAGAACAAAGAGGAAATTTATGGCCGGGCCATTTGAAATTGAGCCTGTCCGAGTGACACATTCTATTCCCGACTGTTGTGGATTAGTTCTTCGCTGTGCTGATGGTACAATTCTTCATACCGGGGACTGGAAGATTGACGAGTCACCACTGGATGGTCAAGGTTTTGATCGTGAAGGTTTGGAAGAACTTTCAAAAGAAGGAGTAACATTGATGATGAGTGACTCTACAAATGTTCTCTCACCTGGAAGGACAACAAGTGAATCTTCTGTGGCTGATGCACTGATGAGGCATATTTCAGCAGCTCAAGGGAGGGTTATTACCACCCAGTTTGCTTCAAACATACATCGACTTGGAAGTGTGAAAGCTGCTGCTGATGCTACTGGTAGAAAGTTGGTATTTGTTGGTATGTCCTTAAGGACATATCTTGATGCAGCTTGGAGGGATGGGAAGGCACCAATAGATCCATCAACCCTGGTAAAAGTGGAAGATATTGATTCCTATGCTCCAAAGGATTTGCTAATCGTCACAACTGGCTCTCAAGCAGAACCACGTGCAGCTCTAAATCTTGCATCATTTGGAAGTAGTCATTCTGTCAAACTGACCAAGGAAGATATAATTTTATATTCTGCTAAGGTTATTCCTGGTAATGAATCTCGGGTGATGAAAATGTTAAACCGCATATCAGATTTGGGATCAACGATAGTGATGGGTAAGAACGAGGGGCTGCACACTTCTGGTCATGGGTACCGTGGAGAACTGGAGGAAGTGCTTAGAATTGTGAAGCCGCAGCACTTTCTGCCCATACATGGAGAACTCTTGTTTCTCAAAGAGCATGAATTGCTTGGGAGATCAACTGGCATCCATCACACCACTGTAATAAAGAATGGGGAAATGCTCGGGGTTTCTCATTTGAGAAACAGAAGGGTACTTTCAAATGGTTTCACCTTGCTTGGAAAGGAGAATTTGCAGTTGAAATATAGTGATGGTGATAAAGCATTTGGTACATCAAGCGACCTTTGTGTTGATGAGAGACTAAAAATTGCCTTAGATGGCATAATAGTGGTCAGCATGGAAATTTTACGGCCCCAAAATGTAAATGGTCTGGCTGAAAGTAGCATAAAAGGAAAGATAAGAATTACTACCCGATGTTTGTGGCTTGACAAAGGAAAGCTATATGATGCGCTCTATAAAGCTGCCCATGCTGCACTGTCAAGCTGCCCTATTAATTGTCCTTTACCTCACATGGAAAGAACAGTGTCTGAGGTATTGAGGAAATTGGTAAGAAAATACAGTGGTAAAAGGCCAGAAGTTATTGCTATTGCCATGGAGAATCCCACAGCAGTTCTTGCCGATGAGGTCAGTACAAGACTATCTGGAAAGTCCCATGTTGGTTATGAGAGGTCAGCTTTACGAAAAGTAATTGATGGAAATTCAAATAAGAGTCGACCAACTAGGACAGAAGCAAATGAAGCCAAGGACAATACACATCTGCAGAGTACCACTTCAGAGCAAGATTTTGAAGATGATGGTGGTGAGGTCAAAGCACCACTACATGTGGAAGTTTCCACTAATTCAAATGTCAATCCCCAAAAGCTTTCTTCTGATACAGAGGAGCCAGATGATTTCTGGAATGCAATGGTCAAGTTATCAGCCGGTGACAAATTAGCAGAAGATAAAAATGGTTTGGTTCTGCAAGAGGAACATGTAAAGAAAGATGACTCTGAAAGCACTGAAACGCCAAGTCCTTCAAAGCCCGTGAAACGGAACAAATGGAAGCCCGAGGAGGTTAAAAAGTTTATTGAAATGCGTGGGAAACTGCACAGCAGATTTCAAGTTGTGAAGGGGAGAATGGCGCTATGGGAAGAAATATCTAGAAACTTGTTGGCTGAGGGGATCAATCGAAGCCCCGGGCAATGCAAATCTTTGTGGTCATCTTTGGTTCAGAAATACGAGGAAAGCAAGAGTGGAAAGAGAAGCCGAAAGAGTTGGCCATATTATGAGGAAATGGATGGAGCTTTGTCTGATTCAGAGGCAATGGCAACAAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000578 GO:0003006 GO:0003674 GO:0003824 GO:0004518 GO:0004519 GO:0004527 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0006810 GO:0006996 GO:0007275 GO:0007389 GO:0008150 GO:0008152 GO:0008409 GO:0009314 GO:0009416 GO:0009507 GO:0009536 GO:0009628 GO:0009657 GO:0009658 GO:0009790 GO:0009791 GO:0009793 GO:0009798 GO:0009880 GO:0009914 GO:0009942 GO:0009987 GO:0010154 GO:0010817 GO:0016043 GO:0016787 GO:0016788 GO:0022414 GO:0032501 GO:0032502 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050896 GO:0051179 GO:0051234 GO:0060918 GO:0061458 GO:0065007 GO:0065008 GO:0071704 GO:0071840 GO:0090304 GO:0090305 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Lactamase_B Lactamase_B_2 Myb_DNA-bind_4 RMMBL

Protein Analysis

921

Amino Acids

101.89

Weight (kDa)

8.93

Isoelectric Point (pI)

42.8

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Lactamase_B	PF00753	137 - 280	4.5e-08	Metallo-beta-lactamase superfamily
Lactamase_B_2	PF12706	146 - 282	2.5e-09	Beta-lactamase superfamily domain
RNase_J_b_CASP	PF22505	340 - 465	1.4e-29	Ribonuclease J, beta-CASP domain
RMMBL	PF07521	480 - 526	1.1e-06	Zn-dependent metallo-hydrolase RNA specificity domain
Myb_DNA-bind_4	PF13837	826 - 908	1.8e-22	Myb/SANT-like DNA-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0008506)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G63420
fragaria_vesca	FvH4_5g07980 FvH4_5g07980 FvH4_5g07980 FvH4_5g07980
malus_domestica	MD06G1143600.v1.1 MD14G1158900.v1.1
prunus_persica	Prupe.5G152800_v2.0.a1 Prupe.5G152800_v2.0.a1 Prupe.5G152800_v2.0.a1
pyrus_communis	pycom06g13330 pycom14g13250
rosa_chinensis	RchiOBHm_Chr7g0190431
rosa_laevigata	RLG00000004533
rosa_multiflora	Rmu_ssc0000036.1_g000001
rosa_roxburghii	Rroxscaffold_3G00264630
rosa_rugosa	Rorug06G0504700 Rorug06G0504700
rosa_samantha	Rh7AG110500 Rh7BG113100 Rh7CG115300
rosa_wichuraiana	Rw0G019850 Rw7G009590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	1458
AccB1I	GGYRCC	2 cut(s)	1165, 1458
AccB7I	CCANNNNNTGG	2 cut(s)	386, 866
AccI	GTMKAC	1 cut(s)	2158
AccII	CGCG	1 cut(s)	256
AciI	CCGC	5 cut(s)	147, 190, 208, 1390, 1499
AclWI	GGATC	6 cut(s)	595, 608, 621, 1169, 1414, 2615
AcoI	YGGCCR	5 cut(s)	10, 144, 565, 735, 2702
AcsI	RAATTY	4 cut(s)	728, 1675, 1788, 2143
AcuI	CTGAAG	2 cut(s)	692, 2202
AcvI	CACGTG	1 cut(s)	1265
AdeI	CACNNNGTG	1 cut(s)	371
AfaI	GTAC	7 cut(s)	622, 820, 1460, 1641, 1717, 2077, 2212
AfiI	CCNNNNNNNGG	6 cut(s)	386, 610, 840, 866, 1520, 2475
AflII	CTTAAG	2 cut(s)	704, 1126
AflIII	ACRYGT	3 cut(s)	254, 2266, 2416
AjnI	CCWGG	3 cut(s)	955, 1185, 1354
AjuI	GAANNNNNNNTTGG	2 cut(s)	564, 596
AleI	CACNNNNGTG	1 cut(s)	582
AloI	GAACNNNNNNTCC	2 cut(s)	474, 506
Alw21I	GWGCWC	2 cut(s)	160, 224
Alw26I	GTCTC	1 cut(s)	1738
AlwI	GGATC	6 cut(s)	595, 608, 621, 1169, 1414, 2615
AlwNI	CAGNNNCTG	1 cut(s)	1973
Ama87I	CYCGRG	4 cut(s)	1368, 1610, 2492, 2621
ApoI	RAATTY	4 cut(s)	728, 1675, 1788, 2143
AseI	ATTAAT	1 cut(s)	1938
Asp718I	GGTACC	1 cut(s)	1458
AspLEI	GCGC	2 cut(s)	1897, 2569
AspS9I	GGNCC	5 cut(s)	192, 293, 359, 740, 1797
AsuC2I	CCSGG	4 cut(s)	739, 835, 2622, 2623
AsuII	TTCGAA	1 cut(s)	203
AvaI	CYCGRG	4 cut(s)	1368, 1610, 2492, 2621
AvaII	GGWCC	1 cut(s)	359
BalI	TGGCCA	2 cut(s)	567, 2704
BamHI	GGATCC	1 cut(s)	613
BanI	GGYRCC	2 cut(s)	1165, 1458
BanII	GRGCYC	1 cut(s)	160
BbrPI	CACGTG	1 cut(s)	1265
BbsI	GAAGAC	1 cut(s)	318
Bbv12I	GWGCWC	2 cut(s)	160, 224
BbvCI	CCTCAGC	1 cut(s)	2601
BceAI	ACGGC	4 cut(s)	27, 134, 151, 1811
BcgI	CGANNNNNNTGC	3 cut(s)	30, 55, 89
BciT130I	CCWGG	3 cut(s)	957, 1187, 1356
BcnI	CCSGG	4 cut(s)	739, 835, 2622, 2623
BcoDI	GTCTC	1 cut(s)	1738
BfaI	CTAG	2 cut(s)	2166, 2586
BfmI	CTRYAG	3 cut(s)	175, 246, 2204
BfoI	RGCGCY	1 cut(s)	2570
BfrI	CTTAAG	2 cut(s)	704, 1126
Bme1390I	CCNGG	7 cut(s)	739, 835, 957, 1187, 1356, 2622, 2623
Bme18I	GGWCC	1 cut(s)	359
BmeT110I	CYCGRG	4 cut(s)	1368, 1610, 2492, 2621
BmgT120I	GGNCC	5 cut(s)	192, 293, 359, 740, 1797
BmiI	GGNNCC	6 cut(s)	294, 615, 1167, 1460, 1799, 2328
BmrFI	CCNGG	7 cut(s)	739, 835, 957, 1187, 1356, 2622, 2623
BmrI	ACTGGG	3 cut(s)	401, 612, 1033
BmsI	GCATC	9 cut(s)	63, 442, 644, 979, 1078, 1132, 1292, 1581, 1882
BmuI	ACTGGG	3 cut(s)	401, 612, 1033
BpiI	GAAGAC	1 cut(s)	318
BpmI	CTGGAG	1 cut(s)	1493
Bpu10I	CCTNAGC	2 cut(s)	1344, 2601
Bpu14I	TTCGAA	1 cut(s)	203
BpuEI	CTTGAG	2 cut(s)	1002, 1236
BpuMI	CCSGG	4 cut(s)	739, 835, 2622, 2623
Bsa29I	ATCGAT	1 cut(s)	436
BsaAI	YACGTR	1 cut(s)	1265
BsaXI	ACNNNNNCTCC	2 cut(s)	343, 373
Bsc4I	CCNNNNNNNGG	6 cut(s)	386, 610, 840, 866, 1520, 2475
Bse118I	RCCGGY	2 cut(s)	455, 2366
Bse1I	ACTGG	9 cut(s)	396, 618, 845, 867, 1039, 1099, 1249, 1476, 1573
Bse3DI	GCAATG	3 cut(s)	2355, 2633, 2754
BseBI	CCWGG	3 cut(s)	957, 1187, 1356
BseCI	ATCGAT	1 cut(s)	436
BseGI	GGATG	7 cut(s)	411, 638, 695, 871, 1162, 1572, 2728
BseLI	CCNNNNNNNGG	6 cut(s)	386, 610, 840, 866, 1520, 2475
BseMI	GCAATG	3 cut(s)	2355, 2633, 2754
BseMII	CTCAG	2 cut(s)	1965, 2592
BseNI	ACTGG	9 cut(s)	396, 618, 845, 867, 1039, 1099, 1249, 1476, 1573
BseRI	GAGGAG	3 cut(s)	173, 2339, 2510
BseYI	CCCAGC	1 cut(s)	604
BsgI	GTGCAG	4 cut(s)	1287, 1424, 1902, 2516
Bsh1236I	CGCG	1 cut(s)	256
BshNI	GGYRCC	2 cut(s)	1165, 1458
BshVI	ATCGAT	1 cut(s)	436
BsiHKAI	GWGCWC	2 cut(s)	160, 224
BsiHKCI	CYCGRG	4 cut(s)	1368, 1610, 2492, 2621
BsiSI	CCGG	5 cut(s)	456, 738, 834, 2367, 2622
BslFI	GGGAC	2 cut(s)	851, 2080
BslI	CCNNNNNNNGG	6 cut(s)	386, 610, 840, 866, 1520, 2475
BsmAI	GTCTC	1 cut(s)	1738
BsmFI	GGGAC	2 cut(s)	851, 2080
BsmI	GAATGC	1 cut(s)	2350
BsoBI	CYCGRG	4 cut(s)	1368, 1610, 2492, 2621
Bsp119I	TTCGAA	1 cut(s)	203
Bsp1286I	GDGCHC	2 cut(s)	160, 224
Bsp19I	CCATGG	2 cut(s)	648, 2037
BspACI	CCGC	5 cut(s)	147, 190, 208, 1390, 1499
BspCNI	CTCAG	2 cut(s)	1966, 2593
BspDI	ATCGAT	1 cut(s)	436
BspFNI	CGCG	1 cut(s)	256
BspLI	GGNNCC	6 cut(s)	294, 615, 1167, 1460, 1799, 2328
BspMAI	CTGCAG	1 cut(s)	2208
BspPI	GGATC	6 cut(s)	595, 608, 621, 1169, 1414, 2615
BspQI	GCTCTTC	1 cut(s)	238
BspT104I	TTCGAA	1 cut(s)	203
BspT107I	GGYRCC	2 cut(s)	1165, 1458
BspTI	CTTAAG	2 cut(s)	704, 1126
BsrDI	GCAATG	3 cut(s)	2355, 2633, 2754
BsrFI	RCCGGY	2 cut(s)	455, 2366
BsrI	ACTGG	9 cut(s)	396, 618, 845, 867, 1039, 1099, 1249, 1476, 1573
BssAI	RCCGGY	2 cut(s)	455, 2366
BssT1I	CCWWGG	5 cut(s)	593, 648, 1317, 2037, 2187
Bst2UI	CCWGG	3 cut(s)	957, 1187, 1356
Bst4CI	ACNGT	7 cut(s)	214, 788, 1463, 1588, 1923, 1969, 2006
Bst6I	CTCTTC	2 cut(s)	238, 277
BstAFI	CTTAAG	2 cut(s)	704, 1126
BstAPI	GCANNNNNTGC	3 cut(s)	1510, 1552, 2060
BstBAI	YACGTR	1 cut(s)	1265
BstBI	TTCGAA	1 cut(s)	203
BstC8I	GCNNGC	2 cut(s)	254, 416
BstDEI	CTNAG	5 cut(s)	1344, 1484, 1759, 1974, 2601
BstDSI	CCRYGG	3 cut(s)	648, 1462, 2037
BstF5I	GGATG	7 cut(s)	411, 638, 695, 871, 1162, 1572, 2728
BstFNI	CGCG	1 cut(s)	256
BstH2I	RGCGCY	1 cut(s)	2570
BstHHI	GCGC	2 cut(s)	1897, 2569
BstMAI	GTCTC	1 cut(s)	1738
BstNI	CCWGG	3 cut(s)	957, 1187, 1356
BstNSI	RCATGY	3 cut(s)	418, 2270, 2420
BstSCI	CCNGG	7 cut(s)	737, 833, 955, 1185, 1354, 2620, 2621
BstSFI	CTRYAG	3 cut(s)	175, 246, 2204
BstUI	CGCG	1 cut(s)	256
BstV2I	GAAGAC	1 cut(s)	318
BstX2I	RGATCY	2 cut(s)	613, 1174
BstYI	RGATCY	2 cut(s)	613, 1174
Bsu15I	ATCGAT	1 cut(s)	436
BsuTUI	ATCGAT	1 cut(s)	436
BtgI	CCRYGG	3 cut(s)	648, 1462, 2037
BtgZI	GCGATG	1 cut(s)	21
BtsCI	GGATG	7 cut(s)	411, 638, 695, 871, 1162, 1572, 2728
BtsIMutI	CAGTG	7 cut(s)	860, 992, 1584, 1919, 1974, 2011, 2442
Cac8I	GCNNGC	2 cut(s)	254, 416
CaiI	CAGNNNCTG	1 cut(s)	1973
CfoI	GCGC	2 cut(s)	1897, 2569
Cfr10I	RCCGGY	2 cut(s)	455, 2366
Cfr13I	GGNCC	5 cut(s)	192, 293, 359, 740, 1797
Cfr9I	CCCGGG	1 cut(s)	2621
ClaI	ATCGAT	1 cut(s)	436
Csp6I	GTAC	7 cut(s)	621, 819, 1459, 1640, 1716, 2076, 2211
CspCI	CAANNNNNGTGG	2 cut(s)	1024, 1059
CviQI	GTAC	7 cut(s)	621, 819, 1459, 1640, 1716, 2076, 2211
DdeI	CTNAG	5 cut(s)	1344, 1484, 1759, 1974, 2601
DraIII	CACNNNGTG	1 cut(s)	371
EaeI	YGGCCR	5 cut(s)	10, 144, 565, 735, 2702
Eam1104I	CTCTTC	2 cut(s)	238, 277
EarI	CTCTTC	2 cut(s)	238, 277
Ecl136II	GAGCTC	1 cut(s)	158
Eco130I	CCWWGG	5 cut(s)	593, 648, 1317, 2037, 2187
Eco24I	GRGCYC	1 cut(s)	160
Eco47I	GGWCC	1 cut(s)	359
Eco53kI	GAGCTC	1 cut(s)	158
Eco57I	CTGAAG	2 cut(s)	692, 2202
Eco72I	CACGTG	1 cut(s)	1265
Eco88I	CYCGRG	4 cut(s)	1368, 1610, 2492, 2621
EcoICRI	GAGCTC	1 cut(s)	158
EcoO109I	RGGNCCY	1 cut(s)	293
EcoRII	CCWGG	3 cut(s)	955, 1185, 1354
EcoT14I	CCWWGG	5 cut(s)	593, 648, 1317, 2037, 2187
EcoT38I	GRGCYC	1 cut(s)	160
ErhI	CCWWGG	5 cut(s)	593, 648, 1317, 2037, 2187
FalI	AAGNNNNNCTT	2 cut(s)	961, 993
FaqI	GGGAC	2 cut(s)	851, 2080
FblI	GTMKAC	1 cut(s)	2158
FokI	GGATG	7 cut(s)	418, 625, 682, 878, 1169, 1559, 2735
FriOI	GRGCYC	1 cut(s)	160
FspBI	CTAG	2 cut(s)	2166, 2586
GlaI	GCGC	2 cut(s)	1896, 2568
GsaI	CCCAGC	1 cut(s)	608
GsuI	CTGGAG	1 cut(s)	1493
HaeII	RGCGCY	1 cut(s)	2570
HapII	CCGG	5 cut(s)	456, 738, 834, 2367, 2622
HhaI	GCGC	2 cut(s)	1897, 2569
Hin6I	GCGC	2 cut(s)	1895, 2567
HinP1I	GCGC	2 cut(s)	1895, 2567
HincII	GTYRAC	1 cut(s)	2159
HindII	GTYRAC	1 cut(s)	2159
HindIII	AAGCTT	1 cut(s)	2306
HpaII	CCGG	5 cut(s)	456, 738, 834, 2367, 2622
Hpy166II	GTNNAC	4 cut(s)	362, 389, 623, 2159
Hpy188III	TCNNGA	9 cut(s)	279, 470, 699, 782, 884, 1139, 2088, 2341, 2586
Hpy8I	GTNNAC	4 cut(s)	362, 389, 623, 2159
Hpy99I	CGWCG	2 cut(s)	155, 230
HpyCH4III	ACNGT	7 cut(s)	214, 788, 1463, 1588, 1923, 1969, 2006
HpyCH4IV	ACGT	2 cut(s)	667, 1264
HpyF3I	CTNAG	5 cut(s)	1344, 1484, 1759, 1974, 2601
HpySE526I	ACGT	2 cut(s)	667, 1264
HspAI	GCGC	2 cut(s)	1895, 2567
KpnI	GGTACC	1 cut(s)	1462
LguI	GCTCTTC	1 cut(s)	238
LmnI	GCTCC	8 cut(s)	155, 227, 247, 334, 652, 1222, 2326, 2726
LweI	GCATC	9 cut(s)	63, 442, 644, 979, 1078, 1132, 1292, 1581, 1882
MaeI	CTAG	2 cut(s)	2166, 2586
MaeII	ACGT	2 cut(s)	667, 1264
MaeIII	GTNAC	6 cut(s)	766, 855, 916, 932, 1237, 2369
MfeI	CAATTG	1 cut(s)	549
MflI	RGATCY	2 cut(s)	613, 1174
MhlI	GDGCHC	2 cut(s)	160, 224
MlsI	TGGCCA	2 cut(s)	567, 2704
MluI	ACGCGT	1 cut(s)	254
MluNI	TGGCCA	2 cut(s)	567, 2704
MlyI	GAGTC	6 cut(s)	308, 498, 863, 929, 2164, 2426
MmeI	TCCRAC	1 cut(s)	133
Mox20I	TGGCCA	2 cut(s)	567, 2704
MscI	TGGCCA	2 cut(s)	567, 2704
MseI	TTAA	5 cut(s)	705, 1127, 1385, 1938, 2502
MslI	CAYNNNNRTG	3 cut(s)	567, 582, 1772
Msp20I	TGGCCA	2 cut(s)	567, 2704
MspCI	CTTAAG	2 cut(s)	704, 1126
MspI	CCGG	5 cut(s)	456, 738, 834, 2367, 2622
MspR9I	CCNGG	7 cut(s)	739, 835, 957, 1187, 1356, 2622, 2623
MunI	CAATTG	1 cut(s)	549
Mva1269I	GAATGC	1 cut(s)	2350
MvaI	CCWGG	3 cut(s)	957, 1187, 1356
MvnI	CGCG	1 cut(s)	256
NciI	CCSGG	4 cut(s)	739, 835, 2622, 2623
NcoI	CCATGG	2 cut(s)	648, 2037
NlaIV	GGNNCC	6 cut(s)	294, 615, 1167, 1460, 1799, 2328
NmuCI	GTSAC	5 cut(s)	766, 855, 932, 1237, 2369
NspI	RCATGY	3 cut(s)	418, 2270, 2420
NspV	TTCGAA	1 cut(s)	203
OliI	CACNNNNGTG	1 cut(s)	582
PaeI	GCATGC	1 cut(s)	418
PciI	ACATGT	2 cut(s)	2266, 2416
PciSI	GCTCTTC	1 cut(s)	238
PctI	GAATGC	1 cut(s)	2350
PfeI	GAWTC	5 cut(s)	974, 1208, 1364, 2044, 2738
PflMI	CCANNNNNTGG	2 cut(s)	386, 866
PleI	GAGTC	6 cut(s)	308, 497, 862, 929, 2163, 2426
PmaCI	CACGTG	1 cut(s)	1265
PmlI	CACGTG	1 cut(s)	1265
PpsI	GAGTC	6 cut(s)	308, 497, 862, 929, 2163, 2426
Ppu21I	YACGTR	1 cut(s)	1265
PscI	ACATGT	2 cut(s)	2266, 2416
PshBI	ATTAAT	1 cut(s)	1938
Psp124BI	GAGCTC	1 cut(s)	160
Psp6I	CCWGG	3 cut(s)	955, 1185, 1354
PspCI	CACGTG	1 cut(s)	1265
PspFI	CCCAGC	1 cut(s)	604
PspGI	CCWGG	3 cut(s)	955, 1185, 1354
PspN4I	GGNNCC	6 cut(s)	294, 615, 1167, 1460, 1799, 2328
PspPI	GGNCC	5 cut(s)	192, 293, 359, 740, 1797
PstI	CTGCAG	1 cut(s)	2208
PstNI	CAGNNNCTG	1 cut(s)	1973
PsuI	RGATCY	2 cut(s)	613, 1174
RsaI	GTAC	7 cut(s)	622, 820, 1460, 1641, 1717, 2077, 2212
RsaNI	GTAC	7 cut(s)	621, 819, 1459, 1640, 1716, 2076, 2211
RseI	CAYNNNNRTG	3 cut(s)	567, 582, 1772
SacI	GAGCTC	1 cut(s)	160
SalI	GTCGAC	1 cut(s)	2157
SapI	GCTCTTC	1 cut(s)	238
SaqAI	TTAA	5 cut(s)	705, 1127, 1385, 1938, 2502
Sau96I	GGNCC	5 cut(s)	192, 293, 359, 740, 1797
SchI	GAGTC	6 cut(s)	308, 498, 863, 929, 2164, 2426
ScrFI	CCNGG	7 cut(s)	739, 835, 957, 1187, 1356, 2622, 2623
SduI	GDGCHC	2 cut(s)	160, 224
SfaNI	GCATC	9 cut(s)	63, 442, 644, 979, 1078, 1132, 1292, 1581, 1882
SfcI	CTRYAG	3 cut(s)	175, 246, 2204
SfuI	TTCGAA	1 cut(s)	203
SinI	GGWCC	1 cut(s)	359
SmaI	CCCGGG	1 cut(s)	2623
SmiMI	CAYNNNNRTG	3 cut(s)	567, 582, 1772
SmlI	CTYRAG	4 cut(s)	704, 1017, 1126, 1251
SmoI	CTYRAG	4 cut(s)	704, 1017, 1126, 1251
SphI	GCATGC	1 cut(s)	418
SsiI	CCGC	5 cut(s)	147, 190, 208, 1390, 1499
SspI	AATATT	1 cut(s)	630
SspMI	CTAG	2 cut(s)	2166, 2586
SstI	GAGCTC	1 cut(s)	160
StyD4I	CCNGG	7 cut(s)	737, 833, 955, 1185, 1354, 2620, 2621
StyI	CCWWGG	5 cut(s)	593, 648, 1317, 2037, 2187
TaaI	ACNGT	7 cut(s)	214, 788, 1463, 1588, 1923, 1969, 2006
TaiI	ACGT	2 cut(s)	670, 1267
TaqI	TCGA	8 cut(s)	48, 65, 203, 436, 477, 1060, 2158, 2614
TatI	WGTACW	2 cut(s)	620, 2075
TauI	GCSGC	3 cut(s)	149, 193, 1501
TfiI	GAWTC	5 cut(s)	974, 1208, 1364, 2044, 2738
Tru1I	TTAA	5 cut(s)	705, 1127, 1385, 1938, 2502
Tru9I	TTAA	5 cut(s)	705, 1127, 1385, 1938, 2502
TscAI	CASTG	7 cut(s)	867, 999, 1591, 1926, 1974, 2011, 2449
TseFI	GTSAC	5 cut(s)	766, 855, 932, 1237, 2369
Tsp45I	GTSAC	5 cut(s)	766, 855, 932, 1237, 2369
TspDTI	ATGAA	9 cut(s)	360, 422, 495, 585, 818, 1377, 1391, 1563, 2196
TspGWI	ACGGA	4 cut(s)	117, 214, 359, 2491
TspMI	CCCGGG	1 cut(s)	2621
TspRI	CASTG	7 cut(s)	867, 999, 1591, 1926, 1974, 2011, 2449
Van91I	CCANNNNNTGG	2 cut(s)	386, 866
Vha464I	CTTAAG	2 cut(s)	704, 1126
VpaK11BI	GGWCC	1 cut(s)	359
VspI	ATTAAT	1 cut(s)	1938
XapI	RAATTY	4 cut(s)	728, 1675, 1788, 2143
XbaI	TCTAGA	1 cut(s)	2585
XceI	RCATGY	3 cut(s)	418, 2270, 2420
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1808, 2337
XmaI	CCCGGG	1 cut(s)	2621
XmiI	GTMKAC	1 cut(s)	2158
XspI	CTAG	2 cut(s)	2166, 2586

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.