Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7C

Orthogroup ID

OG0008506

Physical Location & Seq

Genomic Coordinates Reverse (-)

8891029 .. 8897912

Gene Structure 6884 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7CG115300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2559 bp

ATGGCCGCCGTCGGAGCTCTCTCGCCGTTCCCCTACAGCCTCCTCTGGCCGCCCAAGTCTTCAAACCGCACCGTTTCGTGCTCCGTCGGCTCTTCTACTGCTCCTCCTACAGGCACGCGCGGGTCTAATTATAAAAGATCAGGAAGAGTGGAGGGGCCTCGGAAAAGTATGGAAGACTCTGTTCAGAGAAAGATGGAGCAGTTTTATGAAGGGAGAGATGGTCCACCACTGCGTGTTTTGCCAATCGGTGGACTGGGAGAAATTGGGATGAATTGCATGCTGGTTGGGAATTATGATCGATATATACTGATTGATGCCGGTATCATGTTTCCAGACTTTGATGAACTTGGAGTCCAAAAGATAATACCTGATACCACATTTATCAGAAAATGGAAACACAAAATTGAAGCAATTGTCATTACACATGGCCATGAAGATCACATTGGTGCGTTGCCTTGGCTTATTAGGAAACGTCTGAAGGAAAATGGGATTTTTGTTCCATCCAGACTCAAGATGTTCAGAACAAAGAGGAAATTTATGGCCGGGCCATTTGAAATTGAGCCTATCCGAGTGACACATTCTATTCCCGACTGTTGTGGATTAGTTCTTCGCTGTGTTGATGGTACAATTCTTCATACCGGGGACTGGAAGATTGACGAGTCACCACTGGACGGTCAAGGTTTTGATCGTGAAGGTTTGGAAGAACTTTCAAAAGAAGGAGTAACATTGATGATGAGTGACTCTACAAATGTTCTCTCACCTGGAAGGACAACAAGTGAATCTTCTGTGGCAGATGCACTGATGAGGCATATTTCAGCAGCTCAAGGGAGGGTTATTACCACCCAGTTTGCTTCAAACATACATCGACTTGGAAGTGTGAAAGCTGCTGCTGATGCTACTGGTAGAAAGTTGGTATTTGTTGGTATGTCCTTAAGGACATATCTTGATGCAGCTTGGAGGGATGGGAAGGCACCAATTGATCCATCAACCCTGGTGAAAGTGGAAGATATTGATTCCTATGCTCCAAAGGATTTGCTAATCGTCACAACTGGCTCTCAAGCAGAACCACGTGCAGCTCTAAATCTTGCATCATTTGGAAGTAGTCATTCTGTCAAACTGACCAAGGAAGATATAATTTTATATTCTGCTAAGGTTATTCCTGGTAATGAATCTCGGGTAATGAAAATGTTAAACCGCATATCAGATATGGGATCAACGATAGTGATGGGTAAGAACGAGGGGCTGCACACTTCTGGTCATGGGTACCGTGGAGAACTGGAGGAAGTGCTTAGAATTGTGAAGCCGCAGCACTTTCTTCCCATACATGGAGAACTCTTGTTTCTCAAAGAGCATGAATTGCTGGGGAGATCAACTGGCATCCATCACACCACTGTAATAAAGAATGGGGAAATGCTTGGGGTTTCTCATTTGAGAAACAGAAGGGTACTTTCAAATGGTTTCACCTTGCTTGGAAAGGAGAATTTGCAGTTGAAATATAGTGATGGTGATAAAGCATTTGGTACGTCAAGCGACCTTTGTGTTGATGAGAGACTAAAAATTGCCTTAGATGGCATAATAGTGGTCAGCATGGAAATTTTACGGCCCCAAAATGTAAATGGTCTGGCTGAAAGTAGCATAAAAGGAAAGATAAGAATTACCACCCGATGTTTGTGGCTTGACAAAGGAAAGCTATATGATGCGCTCTATAAAGCTGCCCATGCTGCACTGTCAAGCTGCCCTATTAATTGTCCTTTACCTCACATGGAAAGAACAGTGTCTGAGGTATTGAGGAAATTGGTAAGAAAATACAGTGGTAAAAGGCCAGAAGTTATTGCTATTGCCATGGAGAATCCCACAGCAGTTCTTGCCGATGAGGTCAGTACAAGACTATCTGGAAAGTCCCATGTTGGTTACGAGAGGTCAGCTTTACGAAAAGTAATTGATGGAAATTCAAATAAGAGTCGACCAACTAGGACAGAAGCAAATGAAGTCAAGGACAATACACATCTGCAGAGTACCACTTCAGAGCAAGATTTTGAAGATGATGGTGGTGAAGTCAAAGCACCACTACCTGTGGAAGTTTCCACAGTCAATCCCGAAAAGCTTTCTTCTGATACAAAGGAGCCAGATGATTTCTGGAATGCAATGGTCAAGTTATCAGCTGGTGACAAATTAGCAGAAGATAAAGATGGTTTGGTTCTGCAAGAGGAACATGTAAAGAAAGATGACTCTGAAAGCACTGAGACACCAAATCCTTCAAAGCCGGTGAAACGGAACAAATGGAAGCCCGAGGAGGTTAAAAAGTTTATTGAAATGCGTGGGAAACAGCATAGCAGATTTCAAGTTGTGAAGGGGAGAATGGCGCTATGGGAAGAAATATCTAGAAACTTGTTGGCTGAGGGGATCAATCGAAGCCCTGGGCAATGCAAATCTTTGTGGTCATCTTTGGTTCAGAAATACGAGGAAAGCAAGAGTGGAAAGAGAAGCCGAAAGAGTTGGCCATATTATGAGGAAATGGATGGAGCTTTGTCTGATTCAGAGGCAATGGCAACCAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000578 GO:0003006 GO:0003674 GO:0003824 GO:0004518 GO:0004519 GO:0004527 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0006810 GO:0006996 GO:0007275 GO:0007389 GO:0008150 GO:0008152 GO:0008409 GO:0009314 GO:0009416 GO:0009507 GO:0009536 GO:0009628 GO:0009657 GO:0009658 GO:0009790 GO:0009791 GO:0009793 GO:0009798 GO:0009880 GO:0009914 GO:0009942 GO:0009987 GO:0010154 GO:0010817 GO:0016043 GO:0016787 GO:0016788 GO:0022414 GO:0032501 GO:0032502 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050896 GO:0051179 GO:0051234 GO:0060918 GO:0061458 GO:0065007 GO:0065008 GO:0071704 GO:0071840 GO:0090304 GO:0090305 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Lactamase_B Lactamase_B_2 Myb_DNA-bind_4 RMMBL

Protein Analysis

852

Amino Acids

94.49

Weight (kDa)

8.81

Isoelectric Point (pI)

42.1

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Lactamase_B	PF00753	91 - 157	4.5e-07	Metallo-beta-lactamase superfamily
RNase_J_b_CASP	PF22505	275 - 400	1.3e-29	Ribonuclease J, beta-CASP domain
RMMBL	PF07521	415 - 461	1e-06	Zn-dependent metallo-hydrolase RNA specificity domain
Myb_DNA-bind_4	PF13837	758 - 840	2.9e-22	Myb/SANT-like DNA-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008506)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G63420
fragaria_vesca	FvH4_5g07980 FvH4_5g07980 FvH4_5g07980 FvH4_5g07980
malus_domestica	MD06G1143600.v1.1 MD14G1158900.v1.1
prunus_persica	Prupe.5G152800_v2.0.a1 Prupe.5G152800_v2.0.a1 Prupe.5G152800_v2.0.a1
pyrus_communis	pycom06g13330 pycom14g13250
rosa_chinensis	RchiOBHm_Chr7g0190431
rosa_laevigata	RLG00000004533
rosa_multiflora	Rmu_ssc0000036.1_g000001
rosa_roxburghii	Rroxscaffold_3G00264630
rosa_rugosa	Rorug06G0504700 Rorug06G0504700
rosa_samantha	Rh7AG110500 Rh7BG113100 Rh7CG115300
rosa_wichuraiana	Rw0G019850 Rw7G009590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	132
Acc65I	GGTACC	1 cut(s)	1263
AccB1I	GGYRCC	2 cut(s)	970, 1263
AccB7I	CCANNNNNTGG	1 cut(s)	248
AccI	GTMKAC	1 cut(s)	1963
AccII	CGCG	2 cut(s)	118, 120
AciI	CCGC	6 cut(s)	6, 50, 67, 120, 1195, 1304
AclWI	GGATC	3 cut(s)	974, 1219, 2411
AcoI	YGGCCR	5 cut(s)	3, 47, 427, 540, 2498
AcsI	RAATTY	4 cut(s)	533, 1480, 1593, 1948
AcuI	CTGAAG	2 cut(s)	497, 2007
AcvI	CACGTG	1 cut(s)	1070
AdeI	CACNNNGTG	1 cut(s)	233
AfaI	GTAC	6 cut(s)	625, 1265, 1446, 1522, 1882, 2017
AfiI	CCNNNNNNNGG	5 cut(s)	110, 248, 645, 671, 1325
AflII	CTTAAG	1 cut(s)	931
AflIII	ACRYGT	1 cut(s)	2212
AjnI	CCWGG	4 cut(s)	760, 990, 1159, 2416
AjuI	GAANNNNNNNTTGG	2 cut(s)	426, 458
AleI	CACNNNNGTG	1 cut(s)	444
AloI	GAACNNNNNNTCC	2 cut(s)	336, 368
Alw21I	GWGCWC	2 cut(s)	19, 83
Alw26I	GTCTC	2 cut(s)	1543, 2237
AlwI	GGATC	3 cut(s)	974, 1219, 2411
AlwNI	CAGNNNCTG	1 cut(s)	1778
Ama87I	CYCGRG	2 cut(s)	1173, 2288
AoxI	GGCC	9 cut(s)	3, 47, 155, 427, 540, 545, 1601, 1820, 2498
ApoI	RAATTY	4 cut(s)	533, 1480, 1593, 1948
AseI	ATTAAT	1 cut(s)	1743
Asp718I	GGTACC	1 cut(s)	1263
AspLEI	GCGC	3 cut(s)	120, 1702, 2365
AspS9I	GGNCC	4 cut(s)	155, 221, 545, 1602
AsuC2I	CCSGG	2 cut(s)	544, 640
AsuHPI	GGTGA	8 cut(s)	654, 750, 1006, 1453, 1517, 2063, 2177, 2278
AvaI	CYCGRG	2 cut(s)	1173, 2288
AvaII	GGWCC	1 cut(s)	221
BalI	TGGCCA	2 cut(s)	429, 2500
BanI	GGYRCC	2 cut(s)	970, 1263
BanII	GRGCYC	1 cut(s)	19
BbrPI	CACGTG	1 cut(s)	1070
BbsI	GAAGAC	2 cut(s)	51, 180
Bbv12I	GWGCWC	2 cut(s)	19, 83
BbvCI	CCTCAGC	1 cut(s)	2397
BceAI	ACGGC	2 cut(s)	10, 1616
BciT130I	CCWGG	4 cut(s)	762, 992, 1161, 2418
BcnI	CCSGG	2 cut(s)	544, 640
BcoDI	GTCTC	2 cut(s)	1543, 2237
BfaI	CTAG	2 cut(s)	1971, 2382
BfmI	CTRYAG	3 cut(s)	34, 108, 2009
BfoI	RGCGCY	1 cut(s)	2366
BfrI	CTTAAG	1 cut(s)	931
Bme1390I	CCNGG	6 cut(s)	544, 640, 762, 992, 1161, 2418
Bme18I	GGWCC	1 cut(s)	221
BmeT110I	CYCGRG	2 cut(s)	1173, 2288
BmgT120I	GGNCC	4 cut(s)	155, 221, 545, 1602
BmiI	GGNNCC	5 cut(s)	156, 972, 1265, 1604, 2124
BmrFI	CCNGG	6 cut(s)	544, 640, 762, 992, 1161, 2418
BmrI	ACTGGG	2 cut(s)	263, 838
BmsI	GCATC	7 cut(s)	304, 784, 883, 937, 1097, 1386, 1687
BmuI	ACTGGG	2 cut(s)	263, 838
BpiI	GAAGAC	2 cut(s)	51, 180
BpmI	CTGGAG	1 cut(s)	1298
Bpu10I	CCTNAGC	2 cut(s)	1149, 2397
BpuEI	CTTGAG	3 cut(s)	494, 807, 1041
BpuMI	CCSGG	2 cut(s)	544, 640
Bsa29I	ATCGAT	1 cut(s)	298
BsaAI	YACGTR	1 cut(s)	1070
BsaXI	ACNNNNNCTCC	4 cut(s)	88, 118, 205, 235
Bsc4I	CCNNNNNNNGG	5 cut(s)	110, 248, 645, 671, 1325
Bse118I	RCCGGY	2 cut(s)	317, 2263
Bse1I	ACTGG	8 cut(s)	258, 650, 672, 844, 904, 1054, 1281, 1378
Bse3DI	GCAATG	3 cut(s)	2151, 2429, 2550
BseBI	CCWGG	4 cut(s)	762, 992, 1161, 2418
BseCI	ATCGAT	1 cut(s)	298
BseGI	GGATG	5 cut(s)	273, 500, 967, 1377, 2524
BseLI	CCNNNNNNNGG	5 cut(s)	110, 248, 645, 671, 1325
BseMI	GCAATG	3 cut(s)	2151, 2429, 2550
BseMII	CTCAG	3 cut(s)	1770, 2232, 2388
BseNI	ACTGG	8 cut(s)	258, 650, 672, 844, 904, 1054, 1281, 1378
BseRI	GAGGAG	3 cut(s)	32, 93, 2306
BseYI	CCCAGC	1 cut(s)	1360
BsgI	GTGCAG	3 cut(s)	1092, 1229, 1707
Bsh1236I	CGCG	2 cut(s)	118, 120
BshFI	GGCC	9 cut(s)	5, 49, 157, 429, 542, 547, 1603, 1822, 2500
BshNI	GGYRCC	2 cut(s)	970, 1263
BshVI	ATCGAT	1 cut(s)	298
BsiHKAI	GWGCWC	2 cut(s)	19, 83
BsiHKCI	CYCGRG	2 cut(s)	1173, 2288
BsiSI	CCGG	4 cut(s)	318, 543, 639, 2264
BslFI	GGGAC	2 cut(s)	656, 1885
BslI	CCNNNNNNNGG	5 cut(s)	110, 248, 645, 671, 1325
BsmAI	GTCTC	2 cut(s)	1543, 2237
BsmFI	GGGAC	2 cut(s)	656, 1885
BsmI	GAATGC	1 cut(s)	2146
BsnI	GGCC	9 cut(s)	5, 49, 157, 429, 542, 547, 1603, 1822, 2500
BsoBI	CYCGRG	2 cut(s)	1173, 2288
Bsp1286I	GDGCHC	2 cut(s)	19, 83
Bsp143I	GATC	8 cut(s)	137, 295, 436, 685, 979, 1211, 1367, 2403
Bsp19I	CCATGG	1 cut(s)	1842
BspACI	CCGC	6 cut(s)	6, 50, 67, 120, 1195, 1304
BspANI	GGCC	9 cut(s)	5, 49, 157, 429, 542, 547, 1603, 1822, 2500
BspCNI	CTCAG	3 cut(s)	1771, 2233, 2389
BspDI	ATCGAT	1 cut(s)	298
BspFNI	CGCG	2 cut(s)	118, 120
BspLI	GGNNCC	5 cut(s)	156, 972, 1265, 1604, 2124
BspMAI	CTGCAG	1 cut(s)	2013
BspPI	GGATC	3 cut(s)	974, 1219, 2411
BspQI	GCTCTTC	1 cut(s)	97
BspT107I	GGYRCC	2 cut(s)	970, 1263
BspTI	CTTAAG	1 cut(s)	931
BsrDI	GCAATG	3 cut(s)	2151, 2429, 2550
BsrFI	RCCGGY	2 cut(s)	317, 2263
BsrI	ACTGG	8 cut(s)	258, 650, 672, 844, 904, 1054, 1281, 1378
BssAI	RCCGGY	2 cut(s)	317, 2263
BssMI	GATC	8 cut(s)	137, 295, 436, 685, 979, 1211, 1367, 2403
BssT1I	CCWWGG	3 cut(s)	455, 1122, 1842
Bst2UI	CCWGG	4 cut(s)	762, 992, 1161, 2418
Bst4CI	ACNGT	9 cut(s)	73, 593, 674, 1268, 1393, 1728, 1774, 1811, 2089
Bst6I	CTCTTC	2 cut(s)	97, 139
BstAFI	CTTAAG	1 cut(s)	931
BstAPI	GCANNNNNTGC	2 cut(s)	1357, 1865
BstBAI	YACGTR	1 cut(s)	1070
BstC8I	GCNNGC	2 cut(s)	116, 278
BstDEI	CTNAG	6 cut(s)	1149, 1289, 1564, 1779, 2241, 2397
BstDSI	CCRYGG	2 cut(s)	1267, 1842
BstENI	CCTNNNNNAGG	1 cut(s)	108
BstF5I	GGATG	5 cut(s)	273, 500, 967, 1377, 2524
BstFNI	CGCG	2 cut(s)	118, 120
BstH2I	RGCGCY	1 cut(s)	2366
BstHHI	GCGC	3 cut(s)	120, 1702, 2365
BstKTI	GATC	8 cut(s)	140, 298, 439, 688, 982, 1214, 1370, 2406
BstMAI	GTCTC	2 cut(s)	1543, 2237
BstMBI	GATC	8 cut(s)	137, 295, 436, 685, 979, 1211, 1367, 2403
BstMWI	GCNNNNNNNGC	8 cut(s)	14, 87, 238, 893, 1357, 1718, 1721, 1865
BstNI	CCWGG	4 cut(s)	762, 992, 1161, 2418
BstNSI	RCATGY	2 cut(s)	280, 2216
BstSCI	CCNGG	6 cut(s)	542, 638, 760, 990, 1159, 2416
BstSFI	CTRYAG	3 cut(s)	34, 108, 2009
BstUI	CGCG	2 cut(s)	118, 120
BstV2I	GAAGAC	2 cut(s)	51, 180
Bsu15I	ATCGAT	1 cut(s)	298
BsuRI	GGCC	9 cut(s)	5, 49, 157, 429, 542, 547, 1603, 1822, 2500
BsuTUI	ATCGAT	1 cut(s)	298
BtgI	CCRYGG	2 cut(s)	1267, 1842
BtsCI	GGATG	5 cut(s)	273, 500, 967, 1377, 2524
BtsI	GCAGTG	1 cut(s)	227
BtsIMutI	CAGTG	8 cut(s)	227, 665, 797, 1389, 1724, 1779, 1816, 2238
Cac8I	GCNNGC	2 cut(s)	116, 278
CaiI	CAGNNNCTG	1 cut(s)	1778
CfoI	GCGC	3 cut(s)	120, 1702, 2365
Cfr10I	RCCGGY	2 cut(s)	317, 2263
Cfr13I	GGNCC	4 cut(s)	155, 221, 545, 1602
ClaI	ATCGAT	1 cut(s)	298
Csp6I	GTAC	6 cut(s)	624, 1264, 1445, 1521, 1881, 2016
CspCI	CAANNNNNGTGG	2 cut(s)	829, 864
CviQI	GTAC	6 cut(s)	624, 1264, 1445, 1521, 1881, 2016
DdeI	CTNAG	6 cut(s)	1149, 1289, 1564, 1779, 2241, 2397
DpnI	GATC	8 cut(s)	139, 297, 438, 687, 981, 1213, 1369, 2405
DpnII	GATC	8 cut(s)	137, 295, 436, 685, 979, 1211, 1367, 2403
DraIII	CACNNNGTG	1 cut(s)	233
EaeI	YGGCCR	5 cut(s)	3, 47, 427, 540, 2498
Eam1104I	CTCTTC	2 cut(s)	97, 139
EarI	CTCTTC	2 cut(s)	97, 139
Ecl136II	GAGCTC	1 cut(s)	17
Eco130I	CCWWGG	3 cut(s)	455, 1122, 1842
Eco24I	GRGCYC	1 cut(s)	19
Eco47I	GGWCC	1 cut(s)	221
Eco53kI	GAGCTC	1 cut(s)	17
Eco57I	CTGAAG	2 cut(s)	497, 2007
Eco72I	CACGTG	1 cut(s)	1070
Eco88I	CYCGRG	2 cut(s)	1173, 2288
EcoICRI	GAGCTC	1 cut(s)	17
EcoNI	CCTNNNNNAGG	1 cut(s)	108
EcoO109I	RGGNCCY	1 cut(s)	155
EcoRII	CCWGG	4 cut(s)	760, 990, 1159, 2416
EcoT14I	CCWWGG	3 cut(s)	455, 1122, 1842
EcoT38I	GRGCYC	1 cut(s)	19
ErhI	CCWWGG	3 cut(s)	455, 1122, 1842
FalI	AAGNNNNNCTT	2 cut(s)	766, 798
FaqI	GGGAC	2 cut(s)	656, 1885
FauI	CCCGC	1 cut(s)	113
FblI	GTMKAC	1 cut(s)	1963
FokI	GGATG	5 cut(s)	280, 487, 974, 1364, 2531
FriOI	GRGCYC	1 cut(s)	19
FspBI	CTAG	2 cut(s)	1971, 2382
GlaI	GCGC	3 cut(s)	119, 1701, 2364
GsaI	CCCAGC	1 cut(s)	1364
GsuI	CTGGAG	1 cut(s)	1298
HaeII	RGCGCY	1 cut(s)	2366
HaeIII	GGCC	9 cut(s)	5, 49, 157, 429, 542, 547, 1603, 1822, 2500
HapII	CCGG	4 cut(s)	318, 543, 639, 2264
HhaI	GCGC	3 cut(s)	120, 1702, 2365
Hin6I	GCGC	3 cut(s)	118, 1700, 2363
HinP1I	GCGC	3 cut(s)	118, 1700, 2363
HincII	GTYRAC	1 cut(s)	1964
HindII	GTYRAC	1 cut(s)	1964
HindIII	AAGCTT	1 cut(s)	2102
HpaII	CCGG	4 cut(s)	318, 543, 639, 2264
HphI	GGTGA	8 cut(s)	654, 750, 1006, 1453, 1517, 2063, 2177, 2278
Hpy166II	GTNNAC	3 cut(s)	224, 251, 1964
Hpy8I	GTNNAC	3 cut(s)	224, 251, 1964
Hpy99I	CGWCG	2 cut(s)	14, 89
HpyAV	CCTTC	9 cut(s)	203, 472, 686, 710, 759, 961, 1434, 2265, 2344
HpyCH4III	ACNGT	9 cut(s)	73, 593, 674, 1268, 1393, 1728, 1774, 1811, 2089
HpyCH4IV	ACGT	3 cut(s)	472, 1069, 1523
HpyF10VI	GCNNNNNNNGC	8 cut(s)	14, 87, 238, 893, 1357, 1718, 1721, 1865
HpyF3I	CTNAG	6 cut(s)	1149, 1289, 1564, 1779, 2241, 2397
HpySE526I	ACGT	3 cut(s)	472, 1069, 1523
HspAI	GCGC	3 cut(s)	118, 1700, 2363
KpnI	GGTACC	1 cut(s)	1267
Kzo9I	GATC	8 cut(s)	137, 295, 436, 685, 979, 1211, 1367, 2403
LguI	GCTCTTC	1 cut(s)	97
LmnI	GCTCC	7 cut(s)	14, 86, 106, 196, 1027, 2122, 2522
LweI	GCATC	7 cut(s)	304, 784, 883, 937, 1097, 1386, 1687
MaeI	CTAG	2 cut(s)	1971, 2382
MaeII	ACGT	3 cut(s)	472, 1069, 1523
MaeIII	GTNAC	7 cut(s)	571, 660, 721, 737, 1042, 1910, 2165
MalI	GATC	8 cut(s)	139, 297, 438, 687, 981, 1213, 1369, 2405
MboI	GATC	8 cut(s)	137, 295, 436, 685, 979, 1211, 1367, 2403
MfeI	CAATTG	2 cut(s)	411, 975
MhlI	GDGCHC	2 cut(s)	19, 83
MlsI	TGGCCA	2 cut(s)	429, 2500
MluNI	TGGCCA	2 cut(s)	429, 2500
MlyI	GAGTC	7 cut(s)	170, 360, 501, 668, 734, 1969, 2222
Mox20I	TGGCCA	2 cut(s)	429, 2500
MscI	TGGCCA	2 cut(s)	429, 2500
MseI	TTAA	4 cut(s)	932, 1190, 1743, 2298
MslI	CAYNNNNRTG	3 cut(s)	429, 444, 1577
Msp20I	TGGCCA	2 cut(s)	429, 2500
MspA1I	CMGCKG	1 cut(s)	2162
MspCI	CTTAAG	1 cut(s)	931
MspI	CCGG	4 cut(s)	318, 543, 639, 2264
MspR9I	CCNGG	6 cut(s)	544, 640, 762, 992, 1161, 2418
MunI	CAATTG	2 cut(s)	411, 975
Mva1269I	GAATGC	1 cut(s)	2146
MvaI	CCWGG	4 cut(s)	762, 992, 1161, 2418
MvnI	CGCG	2 cut(s)	118, 120
MwoI	GCNNNNNNNGC	8 cut(s)	14, 87, 238, 893, 1357, 1718, 1721, 1865
NciI	CCSGG	2 cut(s)	544, 640
NcoI	CCATGG	1 cut(s)	1842
NdeII	GATC	8 cut(s)	137, 295, 436, 685, 979, 1211, 1367, 2403
NlaIV	GGNNCC	5 cut(s)	156, 972, 1265, 1604, 2124
NmuCI	GTSAC	5 cut(s)	571, 660, 737, 1042, 2165
NspI	RCATGY	2 cut(s)	280, 2216
OliI	CACNNNNGTG	1 cut(s)	444
PaeI	GCATGC	1 cut(s)	280
PasI	CCCWGGG	1 cut(s)	2417
PciI	ACATGT	1 cut(s)	2212
PciSI	GCTCTTC	1 cut(s)	97
PctI	GAATGC	1 cut(s)	2146
PfeI	GAWTC	5 cut(s)	779, 1013, 1169, 1849, 2534
PflMI	CCANNNNNTGG	1 cut(s)	248
PleI	GAGTC	7 cut(s)	170, 359, 501, 667, 734, 1968, 2222
PmaCI	CACGTG	1 cut(s)	1070
PmlI	CACGTG	1 cut(s)	1070
PpsI	GAGTC	7 cut(s)	170, 359, 501, 667, 734, 1968, 2222
Ppu21I	YACGTR	1 cut(s)	1070
PscI	ACATGT	1 cut(s)	2212
PshBI	ATTAAT	1 cut(s)	1743
PsiI	TTATAA	1 cut(s)	132
Psp124BI	GAGCTC	1 cut(s)	19
Psp6I	CCWGG	4 cut(s)	760, 990, 1159, 2416
PspCI	CACGTG	1 cut(s)	1070
PspFI	CCCAGC	1 cut(s)	1360
PspGI	CCWGG	4 cut(s)	760, 990, 1159, 2416
PspN4I	GGNNCC	5 cut(s)	156, 972, 1265, 1604, 2124
PspPI	GGNCC	4 cut(s)	155, 221, 545, 1602
PstI	CTGCAG	1 cut(s)	2013
PstNI	CAGNNNCTG	1 cut(s)	1778
PvuII	CAGCTG	1 cut(s)	2162
RsaI	GTAC	6 cut(s)	625, 1265, 1446, 1522, 1882, 2017
RsaNI	GTAC	6 cut(s)	624, 1264, 1445, 1521, 1881, 2016
RseI	CAYNNNNRTG	3 cut(s)	429, 444, 1577
SacI	GAGCTC	1 cut(s)	19
SalI	GTCGAC	1 cut(s)	1962
SapI	GCTCTTC	1 cut(s)	97
SaqAI	TTAA	4 cut(s)	932, 1190, 1743, 2298
Sau3AI	GATC	8 cut(s)	137, 295, 436, 685, 979, 1211, 1367, 2403
Sau96I	GGNCC	4 cut(s)	155, 221, 545, 1602
SchI	GAGTC	7 cut(s)	170, 360, 501, 668, 734, 1969, 2222
ScrFI	CCNGG	6 cut(s)	544, 640, 762, 992, 1161, 2418
SduI	GDGCHC	2 cut(s)	19, 83
SfaNI	GCATC	7 cut(s)	304, 784, 883, 937, 1097, 1386, 1687
SfcI	CTRYAG	3 cut(s)	34, 108, 2009
SinI	GGWCC	1 cut(s)	221
SmiMI	CAYNNNNRTG	3 cut(s)	429, 444, 1577
SmlI	CTYRAG	4 cut(s)	509, 822, 931, 1056
SmoI	CTYRAG	4 cut(s)	509, 822, 931, 1056
SphI	GCATGC	1 cut(s)	280
SsiI	CCGC	6 cut(s)	6, 50, 67, 120, 1195, 1304
SspMI	CTAG	2 cut(s)	1971, 2382
SstI	GAGCTC	1 cut(s)	19
StyD4I	CCNGG	6 cut(s)	542, 638, 760, 990, 1159, 2416
StyI	CCWWGG	3 cut(s)	455, 1122, 1842
TaaI	ACNGT	9 cut(s)	73, 593, 674, 1268, 1393, 1728, 1774, 1811, 2089
TaiI	ACGT	3 cut(s)	475, 1072, 1526
TaqI	TCGA	4 cut(s)	298, 865, 1963, 2410
TatI	WGTACW	1 cut(s)	1880
TauI	GCSGC	3 cut(s)	8, 52, 1306
TfiI	GAWTC	5 cut(s)	779, 1013, 1169, 1849, 2534
Tru1I	TTAA	4 cut(s)	932, 1190, 1743, 2298
Tru9I	TTAA	4 cut(s)	932, 1190, 1743, 2298
TscAI	CASTG	8 cut(s)	234, 672, 804, 1396, 1731, 1779, 1816, 2245
TseFI	GTSAC	5 cut(s)	571, 660, 737, 1042, 2165
Tsp45I	GTSAC	5 cut(s)	571, 660, 737, 1042, 2165
TspDTI	ATGAA	9 cut(s)	222, 284, 357, 447, 623, 1182, 1196, 1368, 2001
TspGWI	ACGGA	2 cut(s)	73, 2287
TspRI	CASTG	8 cut(s)	234, 672, 804, 1396, 1731, 1779, 1816, 2245
Van91I	CCANNNNNTGG	1 cut(s)	248
Vha464I	CTTAAG	1 cut(s)	931
VpaK11BI	GGWCC	1 cut(s)	221
VspI	ATTAAT	1 cut(s)	1743
XagI	CCTNNNNNAGG	1 cut(s)	108
XapI	RAATTY	4 cut(s)	533, 1480, 1593, 1948
XbaI	TCTAGA	1 cut(s)	2381
XceI	RCATGY	2 cut(s)	280, 2216
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1613, 2133
XmiI	GTMKAC	1 cut(s)	1963
XspI	CTAG	2 cut(s)	1971, 2382

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.