Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr6

Orthogroup ID

OG0008506

Physical Location & Seq

Genomic Coordinates Reverse (-)

18349363 .. 18356466

Gene Structure 7104 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom06g13330.6

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2763 bp

ATGCAATTAGGGGTTTTGGGGGGTTTATCTGTCTACCATTCTCTCTACCCGGCTCCGTTCAAACCAAGCGTGTCGGCCCAAATGGCTGCTCTCGGAGTTCTCTCTCCGTGCCCTTACAGCCTCCTGTGGCGGCCGAAAGCCGTGGGCCGCTGCTTTTCGTGCTCCGCTGGCTCTCCTACTTCAGCAGGAACACGTGGGTCGAATGTAAGAAGATCGGGAAGAATGGAAGGGCCTCGAAAAAGTATGGAAGACTCTGTTAAACGAAAGATGGAACAATTTTATGAAGGCAGAGAGGGCCCCCCAATCCGTGTTTTACCAATTGGTGGCCTGGGAGAAATTGGGATGAATTGCATGCTGGTTGGGAATTATGACCGCTATATTCTGATTGATGCTGGTGTTATGTTTCCAGACTTTGATGAGCTCGGAGTCCAAAAGATTATACCTGATACCACCTTTATCAAAAAATGGAGCCACAAAATTGAAGCGATTGTTATTACACATGGGCATGAAGACCACATTGGTGCGTTGCCTTGGGTGATCCCAGCTTTGGATCTCGATACACCAATATTTGCATCATCCTTTACCATGGAGCTTATTAAAAAACGCCTGAAGGAACATGGGATTTTTGTCCCGTCAAGACTTAGGACATTTAGAACAAAGAGGAAATTTACGGCTGGACCATTTGAGATTGAGCCTATTCGGGTGACACATTCTATTCCTGACTGTTGTGGATTAGTTCTTCGCTGTTCTGATGGGACAATTCTTCATACTGGGGACTGGAAGATTGACGAGTCACCATTGGATGGTAGAGGTTTTGACCGTGAAGCTTTGGAAGAACTTTCAAAAGAAGGAGTAACATTGATGATGAGTGACTCTACAAATGTACTCTCGCCGGGAAGGACAACTAGCGAATCTTCTGTAGCAGATGCATTGTTGAGGCATATTTCAGCTGCTAAAGGGAGGGTTATAACTACTCAGTTTGCTTCAAACATACACCGACTTGGAAGTGTGAAAGCTGCTGCTGATTTCACCGGCAGAAAGTTGGTATTCGTTGGTATGTCCTTGAGGACATATCTTGATGCAGCTTGGAAGGATGGGAAGGCACCAATTGATCCATCATCCCTGGTGAAAGTGGAAGATATTGATTCCTATGCTCCAAAGGATTTGCTGATTGTCACAACTGGCTCTCAAGCAGAACCACGTGCTGCTCTAAATCTTGCATCATTTGGAAGTAGTCATTCTGTCAAGCTGACCAAAGAGGACGTAATTTTGTATTCAGCTAAGGTAATTCCTGGTAATGAATCTCGGGTAATGAAAATGTTAAACCGCATATCAGATCTTGGCTCAACTATAGTGATGGGTAAGAATGAGGGACTGCACACTTCTGGTCATGGGTATCGCGGAGAATTGGAAGAAGTGCTTCAAATCGTGAAGCCGCAACATTTTCTGCCGATACATGGAGAACTCTTGTTCCTCAAAGAGCATGAATTGCTTGGCAAATCAACTGGCATTCATCACACCACTGTTATAAAAAACGGGGAAATGCTTGGCGTTTCACATTTAAGAAACAGAAGAGTACTTTCTAGTGGTTTCACCATGCTTGGAAAAGAGAATTTGCAGTTGAAGTTTAGTGATGGTGATAAAGCATTTGGTACTTCAAGCGAACTGTGTGTTGATGAGAGACTAAGAATCGCCTTAGACGGCATAATAGTGGTCAGCATGGAAATTTTACGCCCTCAAAACGTAAACGATTCGGCTGAAAATAGCATAAAAGGGAAGATAAAAATTACTACTCGATGTTTATGGCTGGACAAAGGAAAGCTTATTGATGCACTCTATAAAGCTGCCCACGCTGCACTATCAAGCTGCCCCATAAATTGTCCTCTGGCTCACATGGAAAGAACAGTGTCTGAGGTATTGAGGAAATTGGTAAGAAAGTACAGTGGTAAAAGGCCAGACGTCATTGCCATTGCCATGGAGAACCCCGCAGTAGTTCTTGCTGATGAGGTCAGTGCAAGACTATCTGGAAAATCCCATGTTGGTTCTGAGATGTCACAGTTGAGGAAAGTATATGATCGACATCAAAATAAGGGTCTGTCAACTAGGACACAAGCAGATGACGGCAAGACACAAACATATTTTCAGAGTCAGTCAACTAGGACACAAGCAGATGGAGACAAGGACAACACATTACAGAGCATCTCGCAACAAGATACGGAAGAGTCCGAACTAGAAGATGATGGCATTGAAGTCGAAGGACTCCTACCCGAGGAAGATTCTGCTACTTCAAGTTCCAAGTCAGAGAAGCTTTCTTCTGATTCAGAGGATTCGGAGGATTTTTGGAAATCATTGGTTAGATTATCAACTGGTGACAAATCAGTACAAGATGAAAATGGTTTGGTTGCGGAACAGGAACATCCACAGAAAGATGGTCCTGAAAACAGTGAAATACCAAATCCTTCAAAGCCTGTGAAACGCAATAGATGGAAGCCTGAGGAAGTTAAGAAGCTTATTACAATGCGGGGGAAACTGCGTGGCAGATTTCAAGTTGCGAAGGGGCGAATGGCCCTCTGGGAAGAGATATCTAGAAACTTGTTGGCTGATGGGATCGATCGAAGCCCAGGACAATGCAAATCTCTGTGGGCATCCCTGGTTCAGAAATATGAGGAAAGCAAGAGCGGAAAAAGAAGTAGAAAGAGTTGGCCATACTTTGAGGAAATGGATGGAGCTTTGTCTGATTCCGAGGAATTGGCAACAAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000578 GO:0003006 GO:0003674 GO:0003824 GO:0004518 GO:0004519 GO:0004527 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0006810 GO:0006996 GO:0007275 GO:0007389 GO:0008150 GO:0008152 GO:0008409 GO:0009314 GO:0009416 GO:0009507 GO:0009536 GO:0009628 GO:0009657 GO:0009658 GO:0009790 GO:0009791 GO:0009793 GO:0009798 GO:0009880 GO:0009914 GO:0009942 GO:0009987 GO:0010154 GO:0010817 GO:0016043 GO:0016787 GO:0016788 GO:0022414 GO:0032501 GO:0032502 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050896 GO:0051179 GO:0051234 GO:0060918 GO:0061458 GO:0065007 GO:0065008 GO:0071704 GO:0071840 GO:0090304 GO:0090305 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Lactamase_B Lactamase_B_2 Myb_DNA-bind_4 RMMBL

Protein Analysis

921

Amino Acids

101.58

Weight (kDa)

7.87

Isoelectric Point (pI)

43.36

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008506)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G63420
fragaria_vesca	FvH4_5g07980 FvH4_5g07980 FvH4_5g07980 FvH4_5g07980
malus_domestica	MD06G1143600.v1.1 MD14G1158900.v1.1
prunus_persica	Prupe.5G152800_v2.0.a1 Prupe.5G152800_v2.0.a1 Prupe.5G152800_v2.0.a1
pyrus_communis	pycom06g13330 pycom14g13250
rosa_chinensis	RchiOBHm_Chr7g0190431
rosa_laevigata	RLG00000004533
rosa_multiflora	Rmu_ssc0000036.1_g000001
rosa_roxburghii	Rroxscaffold_3G00264630
rosa_rugosa	Rorug06G0504700 Rorug06G0504700
rosa_samantha	Rh7AG110500 Rh7BG113100 Rh7CG115300
rosa_wichuraiana	Rw0G019850 Rw7G009590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	968, 1529
AatII	GACGTC	1 cut(s)	1962
AccB1I	GGYRCC	1 cut(s)	1102
AccB7I	CCANNNNNTGG	2 cut(s)	323, 803
AccBSI	CCGCTC	1 cut(s)	2679
AccI	GTMKAC	1 cut(s)	33
AccII	CGCG	1 cut(s)	1401
AclWI	GGATC	4 cut(s)	532, 558, 1106, 2615
AcoI	YGGCCR	2 cut(s)	131, 2702
AcsI	RAATTY	3 cut(s)	665, 1612, 1725
AcuI	CTGAAG	2 cut(s)	165, 629
AcvI	CACGTG	2 cut(s)	194, 1202
AcyI	GRCGYC	1 cut(s)	1959
AfaI	GTAC	5 cut(s)	885, 1578, 1654, 1940, 2382
AfiI	CCNNNNNNNGG	5 cut(s)	323, 547, 803, 1457, 2269
AflIII	ACRYGT	1 cut(s)	191
AjnI	CCWGG	5 cut(s)	327, 1122, 1291, 2620, 2649
AjuI	GAANNNNNNNTTGG	2 cut(s)	501, 533
AleI	CACNNNNGTG	1 cut(s)	519
AloI	GAACNNNNNNTCC	2 cut(s)	1455, 1487
Alw21I	GWGCWC	2 cut(s)	164, 423
Alw26I	GTCTC	2 cut(s)	1675, 2169
AlwI	GGATC	4 cut(s)	532, 558, 1106, 2615
AlwNI	CAGNNNCTG	1 cut(s)	1910
Ama87I	CYCGRG	2 cut(s)	1305, 2267
AoxI	GGCC	9 cut(s)	75, 131, 145, 230, 295, 325, 1952, 2565, 2702
ApaI	GGGCCC	1 cut(s)	299
ApoI	RAATTY	3 cut(s)	665, 1612, 1725
ArsI	GACNNNNNNTTYG	2 cut(s)	2077, 2109
Asp700I	GAANNNNTTC	1 cut(s)	1419
AspS9I	GGNCC	8 cut(s)	76, 145, 230, 295, 296, 677, 2432, 2566
AsuC2I	CCSGG	2 cut(s)	50, 894
AsuHPI	GGTGA	8 cut(s)	547, 715, 786, 1021, 1138, 1585, 1649, 2381
AvaI	CYCGRG	2 cut(s)	1305, 2267
AvaII	GGWCC	2 cut(s)	677, 2432
AxyI	CCTNAGG	1 cut(s)	2493
BaeGI	GKGCMC	2 cut(s)	113, 299
BalI	TGGCCA	1 cut(s)	2704
BanI	GGYRCC	1 cut(s)	1102
BanII	GRGCYC	2 cut(s)	299, 423
BarI	GAAGNNNNNNTAC	2 cut(s)	2247, 2279
BbrPI	CACGTG	2 cut(s)	194, 1202
BbsI	GAAGAC	2 cut(s)	255, 516
Bbv12I	GWGCWC	2 cut(s)	164, 423
BceAI	ACGGC	4 cut(s)	125, 687, 1717, 2137
BcgI	CGANNNNNNTGC	2 cut(s)	2233, 2267
BciT130I	CCWGG	5 cut(s)	329, 1124, 1293, 2622, 2651
BcnI	CCSGG	2 cut(s)	50, 894
BcoDI	GTCTC	2 cut(s)	1675, 2169
BfaI	CTAG	6 cut(s)	906, 1584, 2103, 2157, 2231, 2586
BfmI	CTRYAG	2 cut(s)	918, 1350
BglI	GCCNNNNNGGC	1 cut(s)	83
BglII	AGATCT	1 cut(s)	1336
BmcAI	AGTACT	1 cut(s)	1578
Bme1390I	CCNGG	7 cut(s)	50, 329, 894, 1124, 1293, 2622, 2651
Bme18I	GGWCC	2 cut(s)	677, 2432
BmeT110I	CYCGRG	2 cut(s)	1305, 2267
BmgT120I	GGNCC	8 cut(s)	76, 145, 230, 295, 296, 677, 2432, 2566
BmiI	GGNNCC	5 cut(s)	54, 297, 298, 470, 1104
BmrFI	CCNGG	7 cut(s)	50, 329, 894, 1124, 1293, 2622, 2651
BmrI	ACTGGG	1 cut(s)	780
BmsI	GCATC	8 cut(s)	379, 581, 916, 1069, 1229, 1819, 2208, 2654
BmuI	ACTGGG	1 cut(s)	780
BpiI	GAAGAC	2 cut(s)	255, 516
Bpu10I	CCTNAGC	1 cut(s)	1281
BpuEI	CTTGAG	2 cut(s)	1084, 1173
BpuMI	CCSGG	2 cut(s)	50, 894
Bsa29I	ATCGAT	1 cut(s)	2610
BsaAI	YACGTR	2 cut(s)	194, 1202
BsaBI	GATNNNNATC	1 cut(s)	2079
BsaHI	GRCGYC	1 cut(s)	1959
Bsc4I	CCNNNNNNNGG	5 cut(s)	323, 547, 803, 1457, 2269
Bse118I	RCCGGY	1 cut(s)	1031
Bse1I	ACTGG	5 cut(s)	775, 782, 1186, 1510, 2371
Bse21I	CCTNAGG	1 cut(s)	2493
Bse3DI	GCAATG	2 cut(s)	1962, 1968
Bse8I	GATNNNNATC	1 cut(s)	2079
BseBI	CCWGG	5 cut(s)	329, 1124, 1293, 2622, 2651
BseCI	ATCGAT	1 cut(s)	2610
BseGI	GGATG	8 cut(s)	348, 575, 808, 1099, 1118, 2416, 2645, 2728
BseJI	GATNNNNATC	1 cut(s)	2079
BseLI	CCNNNNNNNGG	5 cut(s)	323, 547, 803, 1457, 2269
BseMI	GCAATG	2 cut(s)	1962, 1968
BseMII	CTCAG	4 cut(s)	989, 1902, 2037, 2484
BseNI	ACTGG	5 cut(s)	775, 782, 1186, 1510, 2371
BseSI	GKGCMC	2 cut(s)	113, 299
BseX3I	CGGCCG	1 cut(s)	131
BseYI	CCCAGC	1 cut(s)	541
BsgI	GTGCAG	2 cut(s)	1361, 1839
Bsh1236I	CGCG	1 cut(s)	1401
Bsh1285I	CGRYCG	2 cut(s)	134, 2614
BshFI	GGCC	9 cut(s)	77, 133, 147, 232, 297, 327, 1954, 2567, 2704
BshNI	GGYRCC	1 cut(s)	1102
BshVI	ATCGAT	1 cut(s)	2610
BsiEI	CGRYCG	2 cut(s)	134, 2614
BsiHKAI	GWGCWC	2 cut(s)	164, 423
BsiHKCI	CYCGRG	2 cut(s)	1305, 2267
BsiSI	CCGG	3 cut(s)	50, 893, 1032
BslFI	GGGAC	4 cut(s)	614, 769, 788, 1386
BslI	CCNNNNNNNGG	5 cut(s)	323, 547, 803, 1457, 2269
BsmAI	GTCTC	2 cut(s)	1675, 2169
BsmFI	GGGAC	4 cut(s)	614, 769, 788, 1386
BsmI	GAATGC	1 cut(s)	1509
BsnI	GGCC	9 cut(s)	77, 133, 147, 232, 297, 327, 1954, 2567, 2704
BsoBI	CYCGRG	2 cut(s)	1305, 2267
Bsp120I	GGGCCC	1 cut(s)	295
Bsp1286I	GDGCHC	4 cut(s)	113, 164, 299, 423
Bsp143I	GATC	8 cut(s)	212, 537, 550, 1111, 1336, 2074, 2607, 2611
Bsp19I	CCATGG	2 cut(s)	585, 1974
BspANI	GGCC	9 cut(s)	77, 133, 147, 232, 297, 327, 1954, 2567, 2704
BspCNI	CTCAG	4 cut(s)	988, 1903, 2038, 2485
BspDI	ATCGAT	1 cut(s)	2610
BspFNI	CGCG	1 cut(s)	1401
BspLI	GGNNCC	5 cut(s)	54, 297, 298, 470, 1104
BspPI	GGATC	4 cut(s)	532, 558, 1106, 2615
BspT107I	GGYRCC	1 cut(s)	1102
BsrBI	CCGCTC	1 cut(s)	2679
BsrDI	GCAATG	2 cut(s)	1962, 1968
BsrFI	RCCGGY	1 cut(s)	1031
BsrI	ACTGG	5 cut(s)	775, 782, 1186, 1510, 2371
BssAI	RCCGGY	1 cut(s)	1031
BssMI	GATC	8 cut(s)	212, 537, 550, 1111, 1336, 2074, 2607, 2611
BssNI	GRCGYC	1 cut(s)	1959
BssT1I	CCWWGG	3 cut(s)	530, 585, 1974
Bst2UI	CCWGG	5 cut(s)	329, 1124, 1293, 2622, 2651
Bst4CI	ACNGT	8 cut(s)	725, 821, 1525, 1668, 1906, 1943, 2058, 2444
Bst6I	CTCTTC	3 cut(s)	1567, 2214, 2571
BstACI	GRCGYC	1 cut(s)	1959
BstAPI	GCANNNNNTGC	1 cut(s)	1489
BstBAI	YACGTR	2 cut(s)	194, 1202
BstC8I	GCNNGC	2 cut(s)	169, 353
BstDEI	CTNAG	8 cut(s)	641, 975, 1281, 1685, 1696, 1911, 2046, 2493
BstDSI	CCRYGG	3 cut(s)	141, 585, 1974
BstENI	CCTNNNNNAGG	1 cut(s)	2267
BstF5I	GGATG	8 cut(s)	348, 575, 808, 1099, 1118, 2416, 2645, 2728
BstFNI	CGCG	1 cut(s)	1401
BstKTI	GATC	8 cut(s)	215, 540, 553, 1114, 1339, 2077, 2610, 2614
BstMAI	GTCTC	2 cut(s)	1675, 2169
BstMBI	GATC	8 cut(s)	212, 537, 550, 1111, 1336, 2074, 2607, 2611
BstMCI	CGRYCG	2 cut(s)	134, 2614
BstMWI	GCNNNNNNNGC	8 cut(s)	83, 117, 159, 168, 294, 1489, 1850, 1853
BstNI	CCWGG	5 cut(s)	329, 1124, 1293, 2622, 2651
BstNSI	RCATGY	1 cut(s)	355
BstSCI	CCNGG	7 cut(s)	48, 327, 892, 1122, 1291, 2620, 2649
BstSFI	CTRYAG	2 cut(s)	918, 1350
BstSLI	GKGCMC	2 cut(s)	113, 299
BstUI	CGCG	1 cut(s)	1401
BstV2I	GAAGAC	2 cut(s)	255, 516
BstX2I	RGATCY	2 cut(s)	550, 1336
BstXI	CCANNNNNNTGG	1 cut(s)	1975
BstYI	RGATCY	2 cut(s)	550, 1336
BstZI	CGGCCG	1 cut(s)	131
Bsu15I	ATCGAT	1 cut(s)	2610
Bsu36I	CCTNAGG	1 cut(s)	2493
BsuRI	GGCC	9 cut(s)	77, 133, 147, 232, 297, 327, 1954, 2567, 2704
BsuTUI	ATCGAT	1 cut(s)	2610
BtgI	CCRYGG	3 cut(s)	141, 585, 1974
BtsCI	GGATG	8 cut(s)	348, 575, 808, 1099, 1118, 2416, 2645, 2728
BtsIMutI	CAGTG	5 cut(s)	1521, 1911, 1948, 2017, 2449
Cac8I	GCNNGC	2 cut(s)	169, 353
CaiI	CAGNNNCTG	1 cut(s)	1910
Cfr10I	RCCGGY	1 cut(s)	1031
Cfr13I	GGNCC	8 cut(s)	76, 145, 230, 295, 296, 677, 2432, 2566
ClaI	ATCGAT	1 cut(s)	2610
Csp6I	GTAC	5 cut(s)	884, 1577, 1653, 1939, 2381
CviQI	GTAC	5 cut(s)	884, 1577, 1653, 1939, 2381
DdeI	CTNAG	8 cut(s)	641, 975, 1281, 1685, 1696, 1911, 2046, 2493
DpnI	GATC	8 cut(s)	214, 539, 552, 1113, 1338, 2076, 2609, 2613
DpnII	GATC	8 cut(s)	212, 537, 550, 1111, 1336, 2074, 2607, 2611
EaeI	YGGCCR	2 cut(s)	131, 2702
EagI	CGGCCG	1 cut(s)	131
Eam1104I	CTCTTC	3 cut(s)	1567, 2214, 2571
EarI	CTCTTC	3 cut(s)	1567, 2214, 2571
Ecl136II	GAGCTC	1 cut(s)	421
EclXI	CGGCCG	1 cut(s)	131
Eco130I	CCWWGG	3 cut(s)	530, 585, 1974
Eco24I	GRGCYC	2 cut(s)	299, 423
Eco32I	GATATC	1 cut(s)	2583
Eco47I	GGWCC	2 cut(s)	677, 2432
Eco52I	CGGCCG	1 cut(s)	131
Eco53kI	GAGCTC	1 cut(s)	421
Eco57I	CTGAAG	2 cut(s)	165, 629
Eco72I	CACGTG	2 cut(s)	194, 1202
Eco81I	CCTNAGG	1 cut(s)	2493
Eco88I	CYCGRG	2 cut(s)	1305, 2267
EcoICRI	GAGCTC	1 cut(s)	421
EcoNI	CCTNNNNNAGG	1 cut(s)	2267
EcoO109I	RGGNCCY	3 cut(s)	230, 295, 296
EcoRII	CCWGG	5 cut(s)	327, 1122, 1291, 2620, 2649
EcoRV	GATATC	1 cut(s)	2583
EcoT14I	CCWWGG	3 cut(s)	530, 585, 1974
EcoT22I	ATGCAT	1 cut(s)	931
EcoT38I	GRGCYC	2 cut(s)	299, 423
ErhI	CCWWGG	3 cut(s)	530, 585, 1974
FalI	AAGNNNNNCTT	4 cut(s)	1404, 1436, 1806, 1838
FaqI	GGGAC	4 cut(s)	614, 769, 788, 1386
FauI	CCCGC	2 cut(s)	1993, 2514
FblI	GTMKAC	1 cut(s)	33
FokI	GGATG	8 cut(s)	355, 562, 815, 1105, 1106, 2403, 2632, 2735
FriOI	GRGCYC	2 cut(s)	299, 423
FspBI	CTAG	6 cut(s)	906, 1584, 2103, 2157, 2231, 2586
GsaI	CCCAGC	1 cut(s)	545
HaeIII	GGCC	9 cut(s)	77, 133, 147, 232, 297, 327, 1954, 2567, 2704
HapII	CCGG	3 cut(s)	50, 893, 1032
Hin1I	GRCGYC	1 cut(s)	1959
HincII	GTYRAC	2 cut(s)	2100, 2154
HindII	GTYRAC	2 cut(s)	2100, 2154
HindIII	AAGCTT	4 cut(s)	825, 1820, 2306, 2507
HpaII	CCGG	3 cut(s)	50, 893, 1032
HphI	GGTGA	8 cut(s)	547, 715, 786, 1021, 1138, 1585, 1649, 2381
Hpy166II	GTNNAC	4 cut(s)	34, 1747, 2100, 2154
Hpy8I	GTNNAC	4 cut(s)	34, 1747, 2100, 2154
HpyCH4III	ACNGT	8 cut(s)	725, 821, 1525, 1668, 1906, 1943, 2058, 2444
HpyCH4IV	ACGT	5 cut(s)	193, 1201, 1263, 1743, 1959
HpyF10VI	GCNNNNNNNGC	8 cut(s)	83, 117, 159, 168, 294, 1489, 1850, 1853
HpyF3I	CTNAG	8 cut(s)	641, 975, 1281, 1685, 1696, 1911, 2046, 2493
HpySE526I	ACGT	5 cut(s)	193, 1201, 1263, 1743, 1959
Hsp92I	GRCGYC	1 cut(s)	1959
Kzo9I	GATC	8 cut(s)	212, 537, 550, 1111, 1336, 2074, 2607, 2611
LmnI	GCTCC	6 cut(s)	58, 167, 468, 589, 1159, 2726
LweI	GCATC	8 cut(s)	379, 581, 916, 1069, 1229, 1819, 2208, 2654
MaeI	CTAG	6 cut(s)	906, 1584, 2103, 2157, 2231, 2586
MaeII	ACGT	5 cut(s)	193, 1201, 1263, 1743, 1959
MaeIII	GTNAC	7 cut(s)	703, 792, 853, 869, 1174, 2052, 2369
MalI	GATC	8 cut(s)	214, 539, 552, 1113, 1338, 2076, 2609, 2613
MbiI	CCGCTC	1 cut(s)	2679
MboI	GATC	8 cut(s)	212, 537, 550, 1111, 1336, 2074, 2607, 2611
MfeI	CAATTG	2 cut(s)	318, 1107
MflI	RGATCY	2 cut(s)	550, 1336
MhlI	GDGCHC	4 cut(s)	113, 164, 299, 423
MlsI	TGGCCA	1 cut(s)	2704
MluNI	TGGCCA	1 cut(s)	2704
MlyI	GAGTC	7 cut(s)	245, 435, 800, 866, 2155, 2231, 2253
Mox20I	TGGCCA	1 cut(s)	2704
Mph1103I	ATGCAT	1 cut(s)	931
MroXI	GAANNNNTTC	1 cut(s)	1419
MscI	TGGCCA	1 cut(s)	2704
MseI	TTAA	5 cut(s)	258, 597, 1322, 1562, 2502
MslI	CAYNNNNRTG	4 cut(s)	504, 519, 1709, 1973
Msp20I	TGGCCA	1 cut(s)	2704
MspA1I	CMGCKG	3 cut(s)	150, 167, 950
MspI	CCGG	3 cut(s)	50, 893, 1032
MspR9I	CCNGG	7 cut(s)	50, 329, 894, 1124, 1293, 2622, 2651
MunI	CAATTG	2 cut(s)	318, 1107
Mva1269I	GAATGC	1 cut(s)	1509
MvaI	CCWGG	5 cut(s)	329, 1124, 1293, 2622, 2651
MvnI	CGCG	1 cut(s)	1401
MwoI	GCNNNNNNNGC	8 cut(s)	83, 117, 159, 168, 294, 1489, 1850, 1853
NciI	CCSGG	2 cut(s)	50, 894
NcoI	CCATGG	2 cut(s)	585, 1974
NdeII	GATC	8 cut(s)	212, 537, 550, 1111, 1336, 2074, 2607, 2611
NlaIV	GGNNCC	5 cut(s)	54, 297, 298, 470, 1104
NmuCI	GTSAC	6 cut(s)	703, 792, 869, 1174, 2052, 2369
NsiI	ATGCAT	1 cut(s)	931
NspI	RCATGY	1 cut(s)	355
OliI	CACNNNNGTG	1 cut(s)	519
PaeI	GCATGC	1 cut(s)	355
PctI	GAATGC	1 cut(s)	1509
PdmI	GAANNNNTTC	1 cut(s)	1419
PfeI	GAWTC	9 cut(s)	911, 1145, 1301, 1689, 1751, 2276, 2318, 2327, 2738
PflMI	CCANNNNNTGG	2 cut(s)	323, 803
Ple19I	CGATCG	1 cut(s)	2614
PleI	GAGTC	7 cut(s)	245, 434, 799, 866, 2154, 2230, 2253
PmaCI	CACGTG	2 cut(s)	194, 1202
PmlI	CACGTG	2 cut(s)	194, 1202
PpsI	GAGTC	7 cut(s)	245, 434, 799, 866, 2154, 2230, 2253
Ppu21I	YACGTR	2 cut(s)	194, 1202
PsiI	TTATAA	2 cut(s)	968, 1529
Psp124BI	GAGCTC	1 cut(s)	423
Psp6I	CCWGG	5 cut(s)	327, 1122, 1291, 2620, 2649
PspCI	CACGTG	2 cut(s)	194, 1202
PspFI	CCCAGC	1 cut(s)	541
PspGI	CCWGG	5 cut(s)	327, 1122, 1291, 2620, 2649
PspN4I	GGNNCC	5 cut(s)	54, 297, 298, 470, 1104
PspOMI	GGGCCC	1 cut(s)	295
PspPI	GGNCC	8 cut(s)	76, 145, 230, 295, 296, 677, 2432, 2566
PstNI	CAGNNNCTG	1 cut(s)	1910
PsuI	RGATCY	2 cut(s)	550, 1336
PvuI	CGATCG	1 cut(s)	2614
PvuII	CAGCTG	1 cut(s)	950
RsaI	GTAC	5 cut(s)	885, 1578, 1654, 1940, 2382
RsaNI	GTAC	5 cut(s)	884, 1577, 1653, 1939, 2381
RseI	CAYNNNNRTG	4 cut(s)	504, 519, 1709, 1973
SacI	GAGCTC	1 cut(s)	423
SaqAI	TTAA	5 cut(s)	258, 597, 1322, 1562, 2502
Sau3AI	GATC	8 cut(s)	212, 537, 550, 1111, 1336, 2074, 2607, 2611
Sau96I	GGNCC	8 cut(s)	76, 145, 230, 295, 296, 677, 2432, 2566
ScaI	AGTACT	1 cut(s)	1578
SchI	GAGTC	7 cut(s)	245, 435, 800, 866, 2155, 2231, 2253
ScrFI	CCNGG	7 cut(s)	50, 329, 894, 1124, 1293, 2622, 2651
SduI	GDGCHC	4 cut(s)	113, 164, 299, 423
SfaNI	GCATC	8 cut(s)	379, 581, 916, 1069, 1229, 1819, 2208, 2654
SfcI	CTRYAG	2 cut(s)	918, 1350
SinI	GGWCC	2 cut(s)	677, 2432
SmiMI	CAYNNNNRTG	4 cut(s)	504, 519, 1709, 1973
SmlI	CTYRAG	2 cut(s)	1063, 1188
SmoI	CTYRAG	2 cut(s)	1063, 1188
SphI	GCATGC	1 cut(s)	355
SspI	AATATT	1 cut(s)	567
SspMI	CTAG	6 cut(s)	906, 1584, 2103, 2157, 2231, 2586
SstI	GAGCTC	1 cut(s)	423
StyD4I	CCNGG	7 cut(s)	48, 327, 892, 1122, 1291, 2620, 2649
StyI	CCWWGG	3 cut(s)	530, 585, 1974
TaaI	ACNGT	8 cut(s)	725, 821, 1525, 1668, 1906, 1943, 2058, 2444
TaiI	ACGT	5 cut(s)	196, 1204, 1266, 1746, 1962
TaqI	TCGA	8 cut(s)	200, 235, 555, 1795, 2077, 2253, 2610, 2614
TatI	WGTACW	4 cut(s)	883, 1576, 1938, 2380
TauI	GCSGC	3 cut(s)	133, 150, 1438
TfiI	GAWTC	9 cut(s)	911, 1145, 1301, 1689, 1751, 2276, 2318, 2327, 2738
Tru1I	TTAA	5 cut(s)	258, 597, 1322, 1562, 2502
Tru9I	TTAA	5 cut(s)	258, 597, 1322, 1562, 2502
TscAI	CASTG	5 cut(s)	1528, 1911, 1948, 2017, 2449
TseFI	GTSAC	6 cut(s)	703, 792, 869, 1174, 2052, 2369
Tsp45I	GTSAC	6 cut(s)	703, 792, 869, 1174, 2052, 2369
TspDTI	ATGAA	9 cut(s)	297, 359, 522, 755, 1314, 1328, 1500, 1502, 2403
TspGWI	ACGGA	4 cut(s)	45, 96, 296, 2231
TspRI	CASTG	5 cut(s)	1528, 1911, 1948, 2017, 2449
Van91I	CCANNNNNTGG	2 cut(s)	323, 803
VpaK11BI	GGWCC	2 cut(s)	677, 2432
XagI	CCTNNNNNAGG	1 cut(s)	2267
XapI	RAATTY	3 cut(s)	665, 1612, 1725
XbaI	TCTAGA	1 cut(s)	2585
XceI	RCATGY	1 cut(s)	355
XmiI	GTMKAC	1 cut(s)	33
XmnI	GAANNNNTTC	1 cut(s)	1419
XspI	CTAG	6 cut(s)	906, 1584, 2103, 2157, 2231, 2586
ZraI	GACGTC	1 cut(s)	1960
ZrmI	AGTACT	1 cut(s)	1578
Zsp2I	ATGCAT	1 cut(s)	931

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.