mediator of RNA polymerase II transcription subunit
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_5g12601 FvH4_5g12610 |
| rosa_chinensis | RchiOBHm_Chr7g0184721 |
| rosa_laevigata | RLG00000004956 |
| rosa_multiflora | Rmu_ssc0000289.1_g000020 |
| rosa_roxburghii | Rroxscaffold_3G00269400 |
| rosa_rugosa | Rorug06G0464700 |
| rosa_samantha | Rh7AG078200 Rh7BG069100 Rh7CG069900 Rh7DG069300 |
| rosa_wichuraiana | Rw7G005720 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 773 |
| Acc36I | ACCTGC | 1 cut(s) | 802 |
| AccI | GTMKAC | 2 cut(s) | 849, 1011 |
| AciI | CCGC | 3 cut(s) | 519, 591, 1208 |
| AclWI | GGATC | 3 cut(s) | 116, 547, 814 |
| AcoI | YGGCCR | 1 cut(s) | 965 |
| AcuI | CTGAAG | 3 cut(s) | 127, 147, 564 |
| AcyI | GRCGYC | 1 cut(s) | 770 |
| AdeI | CACNNNGTG | 1 cut(s) | 761 |
| AfaI | GTAC | 3 cut(s) | 454, 637, 871 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 41, 184, 424 |
| AgsI | TTSAA | 3 cut(s) | 13, 612, 890 |
| AjiI | CACGTC | 1 cut(s) | 408 |
| AjnI | CCWGG | 1 cut(s) | 160 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 885, 917 |
| AluBI | AGCT | 7 cut(s) | 59, 245, 506, 704, 886, 1099, 1205 |
| AluI | AGCT | 7 cut(s) | 59, 245, 506, 704, 886, 1099, 1205 |
| Alw21I | GWGCWC | 2 cut(s) | 526, 766 |
| Alw44I | GTGCAC | 1 cut(s) | 762 |
| AlwI | GGATC | 3 cut(s) | 116, 547, 814 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 509 |
| Ama87I | CYCGRG | 1 cut(s) | 621 |
| AoxI | GGCC | 1 cut(s) | 965 |
| ApaLI | GTGCAC | 1 cut(s) | 762 |
| ApeKI | GCWGC | 1 cut(s) | 1205 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 188, 339 |
| AspS9I | GGNCC | 1 cut(s) | 1190 |
| AsuHPI | GGTGA | 4 cut(s) | 131, 407, 617, 743 |
| AvaI | CYCGRG | 1 cut(s) | 621 |
| AvaII | GGWCC | 1 cut(s) | 1190 |
| BaeGI | GKGCMC | 1 cut(s) | 766 |
| BalI | TGGCCA | 1 cut(s) | 967 |
| BbsI | GAAGAC | 1 cut(s) | 849 |
| Bbv12I | GWGCWC | 2 cut(s) | 526, 766 |
| BbvI | GCAGC | 1 cut(s) | 1192 |
| BccI | CCATC | 1 cut(s) | 888 |
| BceAI | ACGGC | 1 cut(s) | 19 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 753, 787 |
| BciT130I | CCWGG | 1 cut(s) | 162 |
| BclI | TGATCA | 2 cut(s) | 298, 397 |
| BfaI | CTAG | 4 cut(s) | 60, 450, 905, 1146 |
| BfmI | CTRYAG | 1 cut(s) | 543 |
| BfuAI | ACCTGC | 1 cut(s) | 802 |
| BisI | GCNGC | 1 cut(s) | 1206 |
| BlsI | GCNGC | 1 cut(s) | 1207 |
| Bme1390I | CCNGG | 1 cut(s) | 162 |
| Bme18I | GGWCC | 1 cut(s) | 1190 |
| BmeT110I | CYCGRG | 1 cut(s) | 621 |
| BmgBI | CACGTC | 1 cut(s) | 408 |
| BmgT120I | GGNCC | 1 cut(s) | 1190 |
| BmiI | GGNNCC | 1 cut(s) | 618 |
| BmrFI | CCNGG | 1 cut(s) | 162 |
| BmrI | ACTGGG | 2 cut(s) | 315, 753 |
| BmsI | GCATC | 4 cut(s) | 88, 196, 418, 635 |
| BmuI | ACTGGG | 2 cut(s) | 315, 753 |
| BpiI | GAAGAC | 1 cut(s) | 849 |
| BpmI | CTGGAG | 1 cut(s) | 246 |
| BpuEI | CTTGAG | 2 cut(s) | 519, 962 |
| BsaAI | YACGTR | 1 cut(s) | 635 |
| BsaHI | GRCGYC | 1 cut(s) | 770 |
| BsaJI | CCNNGG | 3 cut(s) | 160, 423, 620 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 430, 460 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 41, 184, 424 |
| Bse1I | ACTGG | 2 cut(s) | 321, 759 |
| Bse3DI | GCAATG | 1 cut(s) | 839 |
| BseBI | CCWGG | 1 cut(s) | 162 |
| BseDI | CCNNGG | 3 cut(s) | 160, 423, 620 |
| BseGI | GGATG | 2 cut(s) | 433, 899 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 41, 184, 424 |
| BseMI | GCAATG | 1 cut(s) | 839 |
| BseMII | CTCAG | 2 cut(s) | 291, 1116 |
| BseNI | ACTGG | 2 cut(s) | 321, 759 |
| BseSI | GKGCMC | 1 cut(s) | 766 |
| BseXI | GCAGC | 1 cut(s) | 1192 |
| BsgI | GTGCAG | 4 cut(s) | 327, 765, 780, 924 |
| BshFI | GGCC | 1 cut(s) | 967 |
| BsiHKAI | GWGCWC | 2 cut(s) | 526, 766 |
| BsiHKCI | CYCGRG | 1 cut(s) | 621 |
| BsiSI | CCGG | 1 cut(s) | 248 |
| BslFI | GGGAC | 1 cut(s) | 669 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 41, 184, 424 |
| BsmFI | GGGAC | 1 cut(s) | 669 |
| BsnI | GGCC | 1 cut(s) | 967 |
| BsoBI | CYCGRG | 1 cut(s) | 621 |
| Bsp1286I | GDGCHC | 2 cut(s) | 526, 766 |
| BspACI | CCGC | 3 cut(s) | 519, 591, 1208 |
| BspANI | GGCC | 1 cut(s) | 967 |
| BspCNI | CTCAG | 2 cut(s) | 290, 1117 |
| BspHI | TCATGA | 1 cut(s) | 202 |
| BspLI | GGNNCC | 1 cut(s) | 618 |
| BspMI | ACCTGC | 1 cut(s) | 802 |
| BspPI | GGATC | 3 cut(s) | 116, 547, 814 |
| BsrDI | GCAATG | 1 cut(s) | 839 |
| BsrI | ACTGG | 2 cut(s) | 321, 759 |
| BssECI | CCNNGG | 3 cut(s) | 160, 423, 620 |
| BssNAI | GTATAC | 1 cut(s) | 850 |
| BssNI | GRCGYC | 1 cut(s) | 770 |
| BssT1I | CCWWGG | 1 cut(s) | 423 |
| Bst1107I | GTATAC | 1 cut(s) | 850 |
| Bst2UI | CCWGG | 1 cut(s) | 162 |
| Bst4CI | ACNGT | 4 cut(s) | 305, 547, 709, 986 |
| BstACI | GRCGYC | 1 cut(s) | 770 |
| BstBAI | YACGTR | 1 cut(s) | 635 |
| BstC8I | GCNNGC | 9 cut(s) | 167, 243, 372, 486, 826, 830, 858, 879, 1118 |
| BstDEI | CTNAG | 2 cut(s) | 277, 1125 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 182 |
| BstF5I | GGATG | 2 cut(s) | 433, 899 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 206, 257, 428, 883, 1031 |
| BstNI | CCWGG | 1 cut(s) | 162 |
| BstNSI | RCATGY | 2 cut(s) | 488, 832 |
| BstSCI | CCNGG | 1 cut(s) | 160 |
| BstSFI | CTRYAG | 1 cut(s) | 543 |
| BstSLI | GKGCMC | 1 cut(s) | 766 |
| BstV1I | GCAGC | 1 cut(s) | 1192 |
| BstV2I | GAAGAC | 1 cut(s) | 849 |
| BstX2I | RGATCY | 1 cut(s) | 539 |
| BstYI | RGATCY | 1 cut(s) | 539 |
| BstZ17I | GTATAC | 1 cut(s) | 850 |
| BsuRI | GGCC | 1 cut(s) | 967 |
| BtrI | CACGTC | 1 cut(s) | 408 |
| BtsCI | GGATG | 2 cut(s) | 433, 899 |
| BtsI | GCAGTG | 1 cut(s) | 936 |
| BtsIMutI | CAGTG | 7 cut(s) | 151, 301, 328, 397, 552, 766, 936 |
| BveI | ACCTGC | 1 cut(s) | 802 |
| Cac8I | GCNNGC | 9 cut(s) | 167, 243, 372, 486, 826, 830, 858, 879, 1118 |
| CaiI | CAGNNNCTG | 1 cut(s) | 509 |
| CciI | TCATGA | 1 cut(s) | 202 |
| Cfr13I | GGNCC | 1 cut(s) | 1190 |
| CseI | GACGC | 2 cut(s) | 356, 993 |
| Csp6I | GTAC | 3 cut(s) | 453, 636, 870 |
| CviAII | CATG | 6 cut(s) | 203, 485, 658, 829, 861, 1037 |
| CviQI | GTAC | 3 cut(s) | 453, 636, 870 |
| DdeI | CTNAG | 2 cut(s) | 277, 1125 |
| DraIII | CACNNNGTG | 1 cut(s) | 761 |
| EaeI | YGGCCR | 1 cut(s) | 965 |
| Eco130I | CCWWGG | 1 cut(s) | 423 |
| Eco47I | GGWCC | 1 cut(s) | 1190 |
| Eco57I | CTGAAG | 3 cut(s) | 127, 147, 564 |
| Eco88I | CYCGRG | 1 cut(s) | 621 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 182 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1190 |
| EcoRII | CCWGG | 1 cut(s) | 160 |
| EcoT14I | CCWWGG | 1 cut(s) | 423 |
| ErhI | CCWWGG | 1 cut(s) | 423 |
| FaeI | CATG | 6 cut(s) | 206, 488, 661, 832, 864, 1040 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 483, 515, 882, 914 |
| FaqI | GGGAC | 1 cut(s) | 669 |
| FatI | CATG | 6 cut(s) | 202, 484, 657, 828, 860, 1036 |
| FauNDI | CATATG | 1 cut(s) | 1021 |
| FbaI | TGATCA | 2 cut(s) | 298, 397 |
| FblI | GTMKAC | 2 cut(s) | 849, 1011 |
| Fnu4HI | GCNGC | 1 cut(s) | 1206 |
| FokI | GGATG | 2 cut(s) | 440, 906 |
| Fsp4HI | GCNGC | 1 cut(s) | 1206 |
| FspBI | CTAG | 4 cut(s) | 60, 450, 905, 1146 |
| GluI | GCNGC | 1 cut(s) | 1206 |
| GsuI | CTGGAG | 1 cut(s) | 246 |
| HaeIII | GGCC | 1 cut(s) | 967 |
| HapII | CCGG | 1 cut(s) | 248 |
| HgaI | GACGC | 2 cut(s) | 356, 993 |
| Hin1I | GRCGYC | 1 cut(s) | 770 |
| Hin1II | CATG | 6 cut(s) | 206, 488, 661, 832, 864, 1040 |
| HincII | GTYRAC | 1 cut(s) | 1012 |
| HindII | GTYRAC | 1 cut(s) | 1012 |
| HindIII | AAGCTT | 1 cut(s) | 884 |
| HinfI | GANTC | 3 cut(s) | 97, 608, 1127 |
| HpaII | CCGG | 1 cut(s) | 248 |
| HphI | GGTGA | 4 cut(s) | 131, 407, 617, 743 |
| Hpy166II | GTNNAC | 6 cut(s) | 232, 563, 764, 850, 1012, 1151 |
| Hpy188I | TCNGA | 7 cut(s) | 51, 102, 194, 280, 402, 583, 1044 |
| Hpy188III | TCNNGA | 5 cut(s) | 125, 203, 344, 509, 699 |
| Hpy8I | GTNNAC | 6 cut(s) | 232, 563, 764, 850, 1012, 1151 |
| Hpy99I | CGWCG | 1 cut(s) | 775 |
| HpyAV | CCTTC | 4 cut(s) | 178, 884, 1181, 1203 |
| HpyCH4III | ACNGT | 4 cut(s) | 305, 547, 709, 986 |
| HpyCH4IV | ACGT | 4 cut(s) | 407, 634, 770, 846 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 206, 257, 428, 883, 1031 |
| HpyF3I | CTNAG | 2 cut(s) | 277, 1125 |
| HpySE526I | ACGT | 4 cut(s) | 407, 634, 770, 846 |
| Hsp92I | GRCGYC | 1 cut(s) | 770 |
| Hsp92II | CATG | 6 cut(s) | 206, 488, 661, 832, 864, 1040 |
| Ksp22I | TGATCA | 2 cut(s) | 298, 397 |
| LmnI | GCTCC | 3 cut(s) | 250, 511, 521 |
| Lsp1109I | GCAGC | 1 cut(s) | 1192 |
| LweI | GCATC | 4 cut(s) | 88, 196, 418, 635 |
| MaeI | CTAG | 4 cut(s) | 60, 450, 905, 1146 |
| MaeII | ACGT | 4 cut(s) | 407, 634, 770, 846 |
| MaeIII | GTNAC | 2 cut(s) | 986, 1061 |
| MboII | GAAGA | 7 cut(s) | 133, 140, 164, 621, 654, 690, 854 |
| MflI | RGATCY | 1 cut(s) | 539 |
| MhlI | GDGCHC | 2 cut(s) | 526, 766 |
| MlsI | TGGCCA | 1 cut(s) | 967 |
| MluCI | AATT | 2 cut(s) | 14, 1137 |
| MluNI | TGGCCA | 1 cut(s) | 967 |
| MlyI | GAGTC | 2 cut(s) | 91, 1136 |
| MmeI | TCCRAC | 1 cut(s) | 694 |
| Mox20I | TGGCCA | 1 cut(s) | 967 |
| MroXI | GAANNNNTTC | 2 cut(s) | 188, 339 |
| MscI | TGGCCA | 1 cut(s) | 967 |
| MslI | CAYNNNNRTG | 1 cut(s) | 729 |
| Msp20I | TGGCCA | 1 cut(s) | 967 |
| MspI | CCGG | 1 cut(s) | 248 |
| MspR9I | CCNGG | 1 cut(s) | 162 |
| MvaI | CCWGG | 1 cut(s) | 162 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 206, 257, 428, 883, 1031 |
| NdeI | CATATG | 1 cut(s) | 1021 |
| NlaIII | CATG | 6 cut(s) | 206, 488, 661, 832, 864, 1040 |
| NlaIV | GGNNCC | 1 cut(s) | 618 |
| NmuCI | GTSAC | 1 cut(s) | 1061 |
| NspI | RCATGY | 2 cut(s) | 488, 832 |
| PaeI | GCATGC | 2 cut(s) | 488, 832 |
| PagI | TCATGA | 1 cut(s) | 202 |
| PdmI | GAANNNNTTC | 2 cut(s) | 188, 339 |
| PfeI | GAWTC | 1 cut(s) | 608 |
| PkrI | GCNGC | 1 cut(s) | 1207 |
| PleI | GAGTC | 2 cut(s) | 91, 1135 |
| PpsI | GAGTC | 2 cut(s) | 91, 1135 |
| Ppu21I | YACGTR | 1 cut(s) | 635 |
| PpuMI | RGGWCCY | 1 cut(s) | 1190 |
| Psp5II | RGGWCCY | 1 cut(s) | 1190 |
| Psp6I | CCWGG | 1 cut(s) | 160 |
| PspGI | CCWGG | 1 cut(s) | 160 |
| PspN4I | GGNNCC | 1 cut(s) | 618 |
| PspPI | GGNCC | 1 cut(s) | 1190 |
| PspPPI | RGGWCCY | 1 cut(s) | 1190 |
| PstNI | CAGNNNCTG | 1 cut(s) | 509 |
| PsuI | RGATCY | 1 cut(s) | 539 |
| RsaI | GTAC | 3 cut(s) | 454, 637, 871 |
| RsaNI | GTAC | 3 cut(s) | 453, 636, 870 |
| RseI | CAYNNNNRTG | 1 cut(s) | 729 |
| SalI | GTCGAC | 1 cut(s) | 1010 |
| SatI | GCNGC | 1 cut(s) | 1206 |
| Sau96I | GGNCC | 1 cut(s) | 1190 |
| SchI | GAGTC | 2 cut(s) | 91, 1136 |
| ScrFI | CCNGG | 1 cut(s) | 162 |
| SduI | GDGCHC | 2 cut(s) | 526, 766 |
| SfaNI | GCATC | 4 cut(s) | 88, 196, 418, 635 |
| SfcI | CTRYAG | 1 cut(s) | 543 |
| SinI | GGWCC | 1 cut(s) | 1190 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 729 |
| SmlI | CTYRAG | 2 cut(s) | 534, 977 |
| SmoI | CTYRAG | 2 cut(s) | 534, 977 |
| SphI | GCATGC | 2 cut(s) | 488, 832 |
| Sse9I | AATT | 2 cut(s) | 14, 1137 |
| SsiI | CCGC | 3 cut(s) | 519, 591, 1208 |
| SspMI | CTAG | 4 cut(s) | 60, 450, 905, 1146 |
| StyD4I | CCNGG | 1 cut(s) | 160 |
| StyI | CCWWGG | 1 cut(s) | 423 |
| TaaI | ACNGT | 4 cut(s) | 305, 547, 709, 986 |
| TaiI | ACGT | 4 cut(s) | 410, 637, 773, 849 |
| TaqI | TCGA | 4 cut(s) | 182, 288, 640, 1011 |
| TasI | AATT | 2 cut(s) | 14, 1137 |
| TfiI | GAWTC | 1 cut(s) | 608 |
| TscAI | CASTG | 7 cut(s) | 151, 308, 328, 397, 552, 766, 943 |
| TseFI | GTSAC | 1 cut(s) | 1061 |
| TseI | GCWGC | 1 cut(s) | 1205 |
| Tsp45I | GTSAC | 1 cut(s) | 1061 |
| TspDTI | ATGAA | 1 cut(s) | 684 |
| TspRI | CASTG | 7 cut(s) | 151, 308, 328, 397, 552, 766, 943 |
| VneI | GTGCAC | 1 cut(s) | 762 |
| VpaK11BI | GGWCC | 1 cut(s) | 1190 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 182 |
| XceI | RCATGY | 2 cut(s) | 488, 832 |
| XmiI | GTMKAC | 2 cut(s) | 849, 1011 |
| XmnI | GAANNNNTTC | 2 cut(s) | 188, 339 |
| XspI | CTAG | 4 cut(s) | 60, 450, 905, 1146 |
| ZraI | GACGTC | 1 cut(s) | 771 |