Rh7BG069100

Mediator of RNA polymerase II transcription subunit

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
OG0017665
Physical Location & Seq
Forward (+)
4592673 .. 4602773
10101 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG069100.1

Sequence Viewer

Length: 1698 bp
ATGACGGCAGAAAAGCGGCTTATGGTGGTCGTCGACGGAACAACAGCTATGGGGCCTTACTGGAAATCCATTCTCTCAGATTACCTCGAAAAGATCATCAGGAACATAAGTGGCCAACCGTCAGCTAACCAGGATGCTTCAGCTGGTGCAGCAGTATACCTGAGCCTGGTTCAGTATAATTCTCACGGACTTGGTAACACTGGTTCCTTAACGCGACCAAGTCCTTGGACTAGAAATGTGGATGGGTTTCTTGAAGGGCTCTCGGCTTTACATTTTTCTGGTGGTGATGGTCCTAATGAAGCCGCCATTGCTGGGGGGCTGGCAGAAGCACTTGTGTGCTCTGTATCTCTTTCTGTGATCTCACCAAAACAGTTTCCAAAACTCAGAGAGATATACAATGCGGGATATATTGATGATCCTGAAGGAACACCTTCCTTCAGCGATGCGAACAATCCTGACGTACTTCTTCTTTTGTCGAAGGACTTCTTAGAGGCTCATGCTGCCCTTATTCAGTATGTAGAAGTGAACATACTGTCAGCTCAGGAGATAAGTCAGATAACAGACTCTGAGCTTGAATATATTGCTTTAGTACATTTCGGAGACAACAGTGAGTTTGATTATATAGGAGATATGTTGGATCCACCCGAGACAGATAAGCAAGATCATCGTGCAGAGAACATTCTCAATGAAACCGAAGAAATGCTTCTTGCAGCAACACAAGACAGTTTTTCACAAGCACCTTCACCCACCTGTTTCATTAGTGAGACATTGTCCAGTAGCCTTATTCAGTACCCCGAAGTACAAGCAAGGGGATCTGAAGCCGGAGAAAGTACTGCTAGTACTACGCAAGCAGAACTCCACTCTCCACAGCAGGCGCAACAAATACTTGCAACTCGTACCATAAGTGGAGTACACAGATCGCAAGGATCTTGCAGGGATCCAAGTAGTCCACAAACCACAACTTCTTTAGACACTTTTGCAACAACTTCTGGCAACTCAAGGGGTCCACGAGCATCTTCACGTACTCAAAGATCTCAAATAAGTATGGATCCTTATTTCAAACCAAGAAGAAGTCCAAGAATTGCATCAAGAGCTACTGTGGACCAAGGAGGACATGAAGGTGCTTTTGCTCGGTTTGGAGAACCATCTGGTCCACACACATCAGTATCTCTGCAAAGAAGACCTGCACAAAAAGGATTGAAGCCTCTTCCTGCTAGTATGCAATGGAAAGAAGACATATACGAGCTAGCATGGGAGGGTACGATCTTCGCCAAGAATCAAGAACGGCTTGTTCTAGTCAGTAAGGCAAAGGCGCACAAGATGAAGTCTGCACCAGAGAGCCTTACTACTGGTTGGCCACGACTGCTGAAGATGGGTAATGTTATACCAGAAGCCACTTTTGGCAGGTCATATGAAAGACAAGCCCATGATTTGATCTTTGAGATTACGGGTGACGAGAAAATATATGACCTACTAAATAAGAACGAGCTGTGTATAAGGTTCATCCTGCCTACTCAGTCACTGATAATTACCCCTGCTGAACACAACCACTTCACTGGGAGAGTGTATGCAGGGGAAGGACCTCTAGTGGAGCAACATCTGGTTGAACAATACAATCAACAAAGGGATCAGCAGCACCAATATGCCACAACTGGTACAAGACTGCGCAATGAGCAAGTCATTGTACTGGATGACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000902 GO:0000904 GO:0001101 GO:0003674 GO:0003676 GO:0003677 GO:0003712 GO:0003713 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006355 GO:0006950 GO:0006952 GO:0007154 GO:0007165 GO:0007602 GO:0008150 GO:0009314 GO:0009416 GO:0009581 GO:0009582 GO:0009583 GO:0009585 GO:0009605 GO:0009607 GO:0009620 GO:0009628 GO:0009639 GO:0009653 GO:0009719 GO:0009725 GO:0009753 GO:0009755 GO:0009867 GO:0009888 GO:0009889 GO:0009891 GO:0009893 GO:0009909 GO:0009911 GO:0009987 GO:0010017 GO:0010026 GO:0010033 GO:0010090 GO:0010091 GO:0010114 GO:0010218 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0010927 GO:0016043 GO:0016592 GO:0019219 GO:0019222 GO:0022607 GO:0023052 GO:0030030 GO:0030031 GO:0030154 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031347 GO:0031349 GO:0031974 GO:0031981 GO:0032502 GO:0032870 GO:0032989 GO:0032991 GO:0042221 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044085 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045893 GO:0045935 GO:0048468 GO:0048518 GO:0048522 GO:0048580 GO:0048582 GO:0048583 GO:0048584 GO:0048646 GO:0048831 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0050832 GO:0050896 GO:0051094 GO:0051171 GO:0051173 GO:0051239 GO:0051240 GO:0051252 GO:0051254 GO:0051606 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0065007 GO:0070013 GO:0070887 GO:0071214 GO:0071229 GO:0071310 GO:0071395 GO:0071478 GO:0071482 GO:0071489 GO:0071495 GO:0071840 GO:0080090 GO:0080134 GO:0090558 GO:0090626 GO:0097159 GO:0098542 GO:0104004 GO:0140110 GO:1901363 GO:1901700 GO:1901701 GO:1902680 GO:1903506 GO:1903508 GO:1905499 GO:2000026 GO:2000112 GO:2000241 GO:2000243 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Med25_VWA

Protein Analysis

565

Amino Acids

62.08

Weight (kDa)

5.25

Isoelectric Point (pI)

44.46

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Med25_VWA PF11265 4 - 113 1.8e-16 Mediator complex subunit 25 von Willebrand factor type A
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0017665)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g12601 FvH4_5g12610
rosa_chinensis RchiOBHm_Chr7g0184721
rosa_laevigata RLG00000004956
rosa_multiflora Rmu_ssc0000289.1_g000020
rosa_roxburghii Rroxscaffold_3G00269400
rosa_rugosa Rorug06G0464700
rosa_samantha Rh7AG078200 Rh7BG069100 Rh7CG069900 Rh7DG069300
rosa_wichuraiana Rw7G005720

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1667
Acc36I ACCTGC 2 cut(s) 1192, 1395
AccI GTMKAC 2 cut(s) 33, 156
AccII CGCG 1 cut(s) 214
AciI CCGC 3 cut(s) 16, 303, 401
AcoI YGGCCR 2 cut(s) 112, 1355
AcuI CTGAAG 5 cut(s) 123, 421, 441, 837, 1388
AfiI CCNNNNNNNGG 2 cut(s) 166, 312
AgsI TTSAA 5 cut(s) 254, 575, 1060, 1201, 1607
AjnI CCWGG 2 cut(s) 129, 165
AjuI GAANNNNNNNTTGG 2 cut(s) 1383, 1415
AleI CACNNNNGTG 1 cut(s) 334
AluBI AGCT 8 cut(s) 47, 125, 143, 539, 571, 1094, 1246, 1489
AluI AGCT 8 cut(s) 47, 125, 143, 539, 571, 1094, 1246, 1489
Alw21I GWGCWC 1 cut(s) 341
Alw26I GTCTC 3 cut(s) 594, 641, 758
AlwNI CAGNNNCTG 2 cut(s) 566, 1522
Ama87I CYCGRG 1 cut(s) 644
AoxI GGCC 3 cut(s) 53, 112, 1355
ApeKI GCWGC 4 cut(s) 149, 500, 710, 1633
Asp700I GAANNNNTTC 3 cut(s) 430, 482, 702
AspLEI GCGC 3 cut(s) 877, 1315, 1668
AspS9I GGNCC 6 cut(s) 53, 290, 1004, 1102, 1151, 1580
AsuHPI GGTGA 4 cut(s) 296, 354, 735, 1463
AsuNHI GCTAGC 1 cut(s) 1246
AvaI CYCGRG 1 cut(s) 644
AvaII GGWCC 5 cut(s) 290, 1004, 1102, 1151, 1580
BaeI ACNNNNGTAYC 2 cut(s) 1149, 1182
BalI TGGCCA 2 cut(s) 114, 1357
BamHI GGATCC 3 cut(s) 637, 937, 1048
BanII GRGCYC 1 cut(s) 261
BarI GAAGNNNNNNTAC 2 cut(s) 513, 545
BauI CACGAG 1 cut(s) 1008
BbsI GAAGAC 2 cut(s) 1186, 1239
Bbv12I GWGCWC 1 cut(s) 341
BbvI GCAGC 4 cut(s) 161, 487, 722, 1645
BccI CCATC 4 cut(s) 236, 281, 1153, 1366
BceAI ACGGC 2 cut(s) 21, 1301
BcgI CGANNNNNNTGC 2 cut(s) 647, 681
BciT130I CCWGG 2 cut(s) 131, 167
BcoDI GTCTC 3 cut(s) 594, 641, 758
BfaI CTAG 7 cut(s) 231, 837, 1215, 1247, 1295, 1586, 1696
BfuAI ACCTGC 2 cut(s) 1192, 1395
BglII AGATCT 1 cut(s) 1031
BisI GCNGC 6 cut(s) 17, 150, 303, 501, 711, 1634
BlsI GCNGC 6 cut(s) 18, 151, 304, 502, 712, 1635
BmcAI AGTACT 2 cut(s) 832, 841
Bme1390I CCNGG 2 cut(s) 131, 167
Bme18I GGWCC 5 cut(s) 290, 1004, 1102, 1151, 1580
BmeT110I CYCGRG 1 cut(s) 644
BmgT120I GGNCC 6 cut(s) 53, 290, 1004, 1102, 1151, 1580
BmiI GGNNCC 6 cut(s) 54, 205, 639, 939, 1005, 1050
BmrFI CCNGG 2 cut(s) 131, 167
BmrI ACTGGG 1 cut(s) 1566
BmsI GCATC 4 cut(s) 124, 433, 1022, 1094
BmtI GCTAGC 1 cut(s) 1250
BmuI ACTGGG 1 cut(s) 1566
BpiI GAAGAC 2 cut(s) 1186, 1239
Bpu10I CCTNAGC 2 cut(s) 161, 540
BpuEI CTTGAG 1 cut(s) 982
BsaAI YACGTR 1 cut(s) 1022
BsaJI CCNNGG 2 cut(s) 224, 1105
Bsc4I CCNNNNNNNGG 2 cut(s) 166, 312
Bse1I ACTGG 7 cut(s) 65, 205, 774, 1354, 1561, 1657, 1692
Bse3DI GCAATG 3 cut(s) 306, 1229, 1675
BseBI CCWGG 2 cut(s) 131, 167
BseDI CCNNGG 2 cut(s) 224, 1105
BseGI GGATG 4 cut(s) 139, 247, 1503, 1696
BseLI CCNNNNNNNGG 2 cut(s) 166, 312
BseMI GCAATG 3 cut(s) 306, 1229, 1675
BseMII CTCAG 6 cut(s) 90, 152, 397, 554, 558, 1529
BseNI ACTGG 7 cut(s) 65, 205, 774, 1354, 1561, 1657, 1692
BseXI GCAGC 4 cut(s) 161, 487, 722, 1645
BseYI CCCAGC 1 cut(s) 311
BsgI GTGCAG 4 cut(s) 168, 690, 1170, 1314
Bsh1236I CGCG 1 cut(s) 214
BshFI GGCC 3 cut(s) 55, 114, 1357
BsiHKAI GWGCWC 1 cut(s) 341
BsiHKCI CYCGRG 1 cut(s) 644
BsiSI CCGG 1 cut(s) 822
BslI CCNNNNNNNGG 2 cut(s) 166, 312
BsmAI GTCTC 3 cut(s) 594, 641, 758
BsnI GGCC 3 cut(s) 55, 114, 1357
BsoBI CYCGRG 1 cut(s) 644
Bsp1286I GDGCHC 2 cut(s) 261, 341
BspACI CCGC 3 cut(s) 16, 303, 401
BspANI GGCC 3 cut(s) 55, 114, 1357
BspCNI CTCAG 6 cut(s) 89, 153, 396, 553, 559, 1528
BspFNI CGCG 1 cut(s) 214
BspLI GGNNCC 6 cut(s) 54, 205, 639, 939, 1005, 1050
BspMI ACCTGC 2 cut(s) 1192, 1395
BspOI GCTAGC 1 cut(s) 1250
BsrDI GCAATG 3 cut(s) 306, 1229, 1675
BsrI ACTGG 7 cut(s) 65, 205, 774, 1354, 1561, 1657, 1692
BssECI CCNNGG 2 cut(s) 224, 1105
BssNAI GTATAC 1 cut(s) 157
BssSI CACGAG 1 cut(s) 1008
BssT1I CCWWGG 2 cut(s) 224, 1105
Bst1107I GTATAC 1 cut(s) 157
Bst2BI CACGAG 1 cut(s) 1008
Bst2UI CCWGG 2 cut(s) 131, 167
Bst4CI ACNGT 6 cut(s) 120, 372, 534, 608, 725, 1099
Bst6I CTCTTC 1 cut(s) 1212
BstBAI YACGTR 1 cut(s) 1022
BstC8I GCNNGC 4 cut(s) 321, 849, 873, 1248
BstDEI CTNAG 7 cut(s) 76, 161, 383, 487, 540, 567, 1515
BstF5I GGATG 4 cut(s) 139, 247, 1503, 1696
BstFNI CGCG 1 cut(s) 214
BstHHI GCGC 3 cut(s) 877, 1315, 1668
BstMAI GTCTC 3 cut(s) 594, 641, 758
BstMWI GCNNNNNNNGC 6 cut(s) 149, 308, 500, 1091, 1363, 1672
BstNI CCWGG 2 cut(s) 131, 167
BstSCI CCNGG 2 cut(s) 129, 165
BstUI CGCG 1 cut(s) 214
BstV1I GCAGC 4 cut(s) 161, 487, 722, 1645
BstV2I GAAGAC 2 cut(s) 1186, 1239
BstX2I RGATCY 6 cut(s) 637, 812, 926, 937, 1031, 1048
BstXI CCANNNNNNTGG 2 cut(s) 225, 1556
BstYI RGATCY 6 cut(s) 637, 812, 926, 937, 1031, 1048
BstZ17I GTATAC 1 cut(s) 157
BsuRI GGCC 3 cut(s) 55, 114, 1357
BtgZI GCGATG 1 cut(s) 456
BtsCI GGATG 4 cut(s) 139, 247, 1503, 1696
BtsIMutI CAGTG 4 cut(s) 198, 613, 1520, 1554
BveI ACCTGC 2 cut(s) 1192, 1395
Cac8I GCNNGC 4 cut(s) 321, 849, 873, 1248
CaiI CAGNNNCTG 2 cut(s) 566, 1522
CfoI GCGC 3 cut(s) 877, 1315, 1668
Cfr13I GGNCC 6 cut(s) 53, 290, 1004, 1102, 1151, 1580
CviAII CATG 4 cut(s) 497, 1115, 1251, 1427
DdeI CTNAG 7 cut(s) 76, 161, 383, 487, 540, 567, 1515
EaeI YGGCCR 2 cut(s) 112, 1355
Eam1104I CTCTTC 1 cut(s) 1212
EarI CTCTTC 1 cut(s) 1212
Eco130I CCWWGG 2 cut(s) 224, 1105
Eco24I GRGCYC 1 cut(s) 261
Eco47I GGWCC 5 cut(s) 290, 1004, 1102, 1151, 1580
Eco57I CTGAAG 5 cut(s) 123, 421, 441, 837, 1388
Eco88I CYCGRG 1 cut(s) 644
EcoO109I RGGNCCY 2 cut(s) 53, 1580
EcoRII CCWGG 2 cut(s) 129, 165
EcoT14I CCWWGG 2 cut(s) 224, 1105
EcoT38I GRGCYC 1 cut(s) 261
ErhI CCWWGG 2 cut(s) 224, 1105
FaeI CATG 4 cut(s) 500, 1118, 1254, 1430
FalI AAGNNNNNCTT 6 cut(s) 470, 502, 687, 719, 1272, 1304
FatI CATG 4 cut(s) 496, 1114, 1250, 1426
FauI CCCGC 1 cut(s) 394
FauNDI CATATG 1 cut(s) 1411
FblI GTMKAC 2 cut(s) 33, 156
Fnu4HI GCNGC 6 cut(s) 17, 150, 303, 501, 711, 1634
FokI GGATG 3 cut(s) 146, 254, 1490
FriOI GRGCYC 1 cut(s) 261
Fsp4HI GCNGC 6 cut(s) 17, 150, 303, 501, 711, 1634
FspBI CTAG 7 cut(s) 231, 837, 1215, 1247, 1295, 1586, 1696
FspI TGCGCA 1 cut(s) 1667
GlaI GCGC 3 cut(s) 876, 1314, 1667
GluI GCNGC 6 cut(s) 17, 150, 303, 501, 711, 1634
GsaI CCCAGC 1 cut(s) 315
HaeIII GGCC 3 cut(s) 55, 114, 1357
HapII CCGG 1 cut(s) 822
HhaI GCGC 3 cut(s) 877, 1315, 1668
Hin1II CATG 4 cut(s) 500, 1118, 1254, 1430
Hin6I GCGC 3 cut(s) 875, 1313, 1666
HinP1I GCGC 3 cut(s) 875, 1313, 1666
HincII GTYRAC 1 cut(s) 34
HindII GTYRAC 1 cut(s) 34
HinfI GANTC 2 cut(s) 563, 1276
HpaII CCGG 1 cut(s) 822
HphI GGTGA 4 cut(s) 296, 354, 735, 1463
Hpy166II GTNNAC 8 cut(s) 34, 157, 526, 913, 950, 1007, 1102, 1154
Hpy188I TCNGA 6 cut(s) 79, 386, 555, 568, 599, 817
Hpy188III TCNNGA 7 cut(s) 100, 251, 419, 455, 542, 1089, 1280
Hpy8I GTNNAC 8 cut(s) 34, 157, 526, 913, 950, 1007, 1102, 1154
Hpy99I CGWCG 2 cut(s) 35, 38
HpyAV CCTTC 8 cut(s) 248, 416, 441, 445, 472, 750, 1112, 1571
HpyCH4III ACNGT 6 cut(s) 120, 372, 534, 608, 725, 1099
HpyCH4IV ACGT 2 cut(s) 459, 1021
HpyF10VI GCNNNNNNNGC 6 cut(s) 149, 308, 500, 1091, 1363, 1672
HpyF3I CTNAG 7 cut(s) 76, 161, 383, 487, 540, 567, 1515
HpySE526I ACGT 2 cut(s) 459, 1021
Hsp92II CATG 4 cut(s) 500, 1118, 1254, 1430
HspAI GCGC 3 cut(s) 875, 1313, 1666
LmnI GCTCC 1 cut(s) 1591
Lsp1109I GCAGC 4 cut(s) 161, 487, 722, 1645
LweI GCATC 4 cut(s) 124, 433, 1022, 1094
MaeI CTAG 7 cut(s) 231, 837, 1215, 1247, 1295, 1586, 1696
MaeII ACGT 2 cut(s) 459, 1021
MaeIII GTNAC 3 cut(s) 194, 1451, 1518
MboII GAAGA 9 cut(s) 458, 707, 1008, 1080, 1191, 1199, 1244, 1258, 1381
MflI RGATCY 6 cut(s) 637, 812, 926, 937, 1031, 1048
MhlI GDGCHC 2 cut(s) 261, 341
MlsI TGGCCA 2 cut(s) 114, 1357
MluCI AATT 3 cut(s) 178, 1080, 1527
MluNI TGGCCA 2 cut(s) 114, 1357
MlyI GAGTC 1 cut(s) 557
MmeI TCCRAC 1 cut(s) 615
MnlI CCTC 6 cut(s) 95, 484, 1103, 1215, 1249, 1593
Mox20I TGGCCA 2 cut(s) 114, 1357
MroXI GAANNNNTTC 3 cut(s) 430, 482, 702
MscI TGGCCA 2 cut(s) 114, 1357
MseI TTAA 1 cut(s) 209
MslI CAYNNNNRTG 3 cut(s) 334, 1119, 1641
Msp20I TGGCCA 2 cut(s) 114, 1357
MspA1I CMGCKG 1 cut(s) 143
MspI CCGG 1 cut(s) 822
MspR9I CCNGG 2 cut(s) 131, 167
MvaI CCWGG 2 cut(s) 131, 167
MvnI CGCG 1 cut(s) 214
MwoI GCNNNNNNNGC 6 cut(s) 149, 308, 500, 1091, 1363, 1672
NdeI CATATG 1 cut(s) 1411
NheI GCTAGC 1 cut(s) 1246
NlaIII CATG 4 cut(s) 500, 1118, 1254, 1430
NlaIV GGNNCC 6 cut(s) 54, 205, 639, 939, 1005, 1050
NmeAIII GCCGAG 1 cut(s) 242
NmuCI GTSAC 2 cut(s) 1451, 1518
NsbI TGCGCA 1 cut(s) 1667
OliI CACNNNNGTG 1 cut(s) 334
PdmI GAANNNNTTC 3 cut(s) 430, 482, 702
PfeI GAWTC 1 cut(s) 1276
PflFI GACNNNGTC 2 cut(s) 219, 769
PkrI GCNGC 6 cut(s) 18, 151, 304, 502, 712, 1635
PleI GAGTC 1 cut(s) 557
PpsI GAGTC 1 cut(s) 557
Ppu21I YACGTR 1 cut(s) 1022
PpuMI RGGWCCY 1 cut(s) 1580
Psp5II RGGWCCY 1 cut(s) 1580
Psp6I CCWGG 2 cut(s) 129, 165
PspFI CCCAGC 1 cut(s) 311
PspGI CCWGG 2 cut(s) 129, 165
PspN4I GGNNCC 6 cut(s) 54, 205, 639, 939, 1005, 1050
PspPI GGNCC 6 cut(s) 53, 290, 1004, 1102, 1151, 1580
PspPPI RGGWCCY 1 cut(s) 1580
PsrI GAACNNNNNNTAC 2 cut(s) 187, 219
PstNI CAGNNNCTG 2 cut(s) 566, 1522
PsuI RGATCY 6 cut(s) 637, 812, 926, 937, 1031, 1048
PsyI GACNNNGTC 2 cut(s) 219, 769
PvuII CAGCTG 1 cut(s) 143
RseI CAYNNNNRTG 3 cut(s) 334, 1119, 1641
SalI GTCGAC 1 cut(s) 32
SaqAI TTAA 1 cut(s) 209
SatI GCNGC 6 cut(s) 17, 150, 303, 501, 711, 1634
Sau96I GGNCC 6 cut(s) 53, 290, 1004, 1102, 1151, 1580
ScaI AGTACT 2 cut(s) 832, 841
SchI GAGTC 1 cut(s) 557
ScrFI CCNGG 2 cut(s) 131, 167
SduI GDGCHC 2 cut(s) 261, 341
SfaNI GCATC 4 cut(s) 124, 433, 1022, 1094
SgrDI CGTCGACG 1 cut(s) 32
SinI GGWCC 5 cut(s) 290, 1004, 1102, 1151, 1580
SmiMI CAYNNNNRTG 3 cut(s) 334, 1119, 1641
SmlI CTYRAG 1 cut(s) 997
SmoI CTYRAG 1 cut(s) 997
Sse9I AATT 3 cut(s) 178, 1080, 1527
SsiI CCGC 3 cut(s) 16, 303, 401
SspMI CTAG 7 cut(s) 231, 837, 1215, 1247, 1295, 1586, 1696
StyD4I CCNGG 2 cut(s) 129, 165
StyI CCWWGG 2 cut(s) 224, 1105
TaaI ACNGT 6 cut(s) 120, 372, 534, 608, 725, 1099
TaiI ACGT 2 cut(s) 462, 1024
TaqI TCGA 3 cut(s) 33, 87, 476
TasI AATT 3 cut(s) 178, 1080, 1527
TatI WGTACW 6 cut(s) 589, 799, 830, 839, 910, 1684
TauI GCSGC 2 cut(s) 19, 305
TfiI GAWTC 1 cut(s) 1276
Tru1I TTAA 1 cut(s) 209
Tru9I TTAA 1 cut(s) 209
TscAI CASTG 4 cut(s) 205, 613, 1527, 1561
TseFI GTSAC 2 cut(s) 1451, 1518
TseI GCWGC 4 cut(s) 149, 500, 710, 1633
Tsp45I GTSAC 2 cut(s) 1451, 1518
TspDTI ATGAA 7 cut(s) 312, 702, 745, 1131, 1337, 1428, 1492
TspGWI ACGGA 2 cut(s) 51, 201
TspRI CASTG 4 cut(s) 205, 613, 1527, 1561
Tth111I GACNNNGTC 2 cut(s) 219, 769
VpaK11BI GGWCC 5 cut(s) 290, 1004, 1102, 1151, 1580
XmiI GTMKAC 2 cut(s) 33, 156
XmnI GAANNNNTTC 3 cut(s) 430, 482, 702
XspI CTAG 7 cut(s) 231, 837, 1215, 1247, 1295, 1586, 1696
ZrmI AGTACT 2 cut(s) 832, 841
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.