FvH4_5g12790

Phosphoribosylaminoimidazole carboxylase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0008753
Physical Location & Seq
Forward (+)
7237759 .. 7242410
4652 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g12790.t1

Sequence Viewer

Length: 1887 bp
ATGCTTCAACAGCAGAGCTCACTCTTCTTCTTTAAGCCCTGTTTGGTTCTCCCCTATACCAAAAACCCATTCTTCTCCTCCTCCTCCTCTTCCTCCATGGACCTCAAAACCAACCTCCTCTCTTCTTCTTCTTCTTCTCACCACCACAGTCCGGCCTCGGCCTTGTCCTGCCGGGCATCACGTGAACCTCACGTGACTCCTCCCAGTAAAGATGGAGCTGTTCATGGACTGTCTGAGACCATTGTGGGTGTTCTTGGAGGAGGCCAGCTGGGTCGAATGCTGTGCCAAGCAGCTTCCCAAATGGCCATTAAGGTCATGGTGTTGGACCCAGAAGAAAGCTGCCCTGCTAGTAAGCTTGCCCATCACCATATGGTTGGTAGCTTCGATGATAGTGCCACTGTCCAGAAATTTGCCAAAAGGTGTGGAGTTTTGACTGTTGAAATCGAACATGTGGATGTGGAGACATTGGAGAAGCTTGAGCAGCAAGGAGTGGACTGCCAGCCAAAAGCCTCTACAATCAGAATCATTCAGAAGGTTCACTTTTCGGAGCATGGTATTCCACTTCCTGAATTTATGGAGATAGATGATCTGGAAGGTGCCAAGAGGGCAGGCGACCGCTTTGACTATCCTCTGATGATAAAGAGTAAAAGATTAGCTTATGATGGGCGTGGAAATGCTGTTGCTAAGAGTGAGGAGGATCTTACTTCTGCTGTAACAGCGCTTGGAGGGTTTGATCGCGGTTTATATGTTGAGAAATGGGCTCCTTTTGTTAAGGAGTTGGCTGTCATTGTTGCTAGAGGAAGAGACAATTCTATTGTATGCTATCCTGTTGTTGAAACTATACACAAGGAAAACATTTGTCATATTGTCAAAGCACCTGCTAACGTGCCATGGAAGATCCAAAAGTTGGCCACTGATATTGCATCTAGAGCTGTTAGTTCATTAGAAGGAGCTGGTGTGTTTGCAGTTGAGTTGTTCTTGACAGTGGATGATCAGATTTTGCTAAATGAAGTAGCTCCTAGACCTCACAATAGCGGTCATCACACAATAGAGTCTTGCTACACATCACAGTACGAACAGCATTTGCGGGCTGTTGTTGGTCTTCCACTTGGTGATCCATCAATGAAGGCACCCGCTGCAATTATGTACAATTTACTTGGTGAAGATGAGGGGGAAGCTGGTTTCCACCTAGCTCATCAAGTGATTGGAAGAGCCTTATGTATTCCAGGGGCTACTGTTCATTGGTATGATAAGCCAGATATGCGGAAGCAACGGAAAATGGGTCATATTACCATTGTTGGACGTTCCATGGGCAAGGTGGAAAAAGCTCTGAATGCAATGCTAAATGATGAAATATCTGATAGTCGGTCTGCTGCCACACCACTTGTTGGGATCATTATGGGTTCTGATTCAGATCTTCCTGTTATGAAGGAAGCTGCAAAAGTTTTGAATATATTTGAAGTGCCTCACGAGATTAGGATAGTTTCTGCTCATCGAACTCCTGATTGGATGCACTCTTATGCATTGTCTGCCCACAAAAGAGGAATTGAGGTCATCATTGCTGGTGCTGGTGGCGCAGCTCACTTGCCAGGAATGGTAGCTGCATCCTCTCCATTGACCGTTATTGGTGTCCCTGTGCGCGCCTCTACATTGGATGGAGTTGATTCGGCTCTATCTATATTGCAGATGCCAAGAGGGGTCCCGGTTGCGGCAATTGCTATAAACAACGCCACCAATGCTGGTCTGCTAGCAGTAAGGATATTAGCTCATGGTGATCCTGATCTACGTGCAAGAATCATACAGTATCAAGAAGACATAAAGAACGAAGTCTTGGCAAAAGATGAGAAGCTACAGAAAGATGGTTGGGAATCTTACTTGGATCCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00230 ko01100 ko01110 map00230 map01100 map01110
Pfam Domains
Protein Families
AIRC ATP-grasp

Protein Analysis

629

Amino Acids

68.0

Weight (kDa)

6.25

Isoelectric Point (pI)

45.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RS_preATP-grasp-like PF22660 82 - 177 6.5e-32 Ribonucleotide synthetase preATP-grasp domain
ATP-grasp PF02222 180 - 358 4e-65 ATP-grasp domain
Dala_Dala_lig_C PF07478 183 - 342 5.6e-09 D-ala D-ala ligase C-terminus
PurK_C PF17769 380 - 442 1.9e-17 Phosphoribosylaminoimidazole carboxylase C-terminal domain
AIRC PF00731 463 - 608 1.2e-60 AIR carboxylase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 886
Acc36I ACCTGC 1 cut(s) 886
AccB1I GGYRCC 2 cut(s) 596, 1129
AccB7I CCANNNNNTGG 2 cut(s) 907, 1388
AccII CGCG 2 cut(s) 738, 1641
AciI CCGC 7 cut(s) 616, 738, 1035, 1087, 1134, 1264, 1709
AclWI GGATC 6 cut(s) 705, 892, 1109, 1400, 1769, 1874
AcoI YGGCCR 2 cut(s) 303, 909
AcsI RAATTY 2 cut(s) 407, 569
AcvI CACGTG 2 cut(s) 182, 193
AdeI CACNNNGTG 1 cut(s) 1112
AfaI GTAC 2 cut(s) 1073, 1148
AfeI AGCGCT 1 cut(s) 720
AfiI CCNNNNNNNGG 4 cut(s) 151, 907, 1388, 1708
AflIII ACRYGT 1 cut(s) 448
AgsI TTSAA 5 cut(s) 8, 440, 836, 1450, 1460
AjnI CCWGG 2 cut(s) 1225, 1588
AjuI GAANNNNNNNTTGG 6 cut(s) 53, 85, 1489, 1521, 1814, 1846
Alw21I GWGCWC 1 cut(s) 20
Alw26I GTCTC 3 cut(s) 230, 455, 798
AlwI GGATC 6 cut(s) 705, 892, 1109, 1400, 1769, 1874
Aor51HI AGCGCT 1 cut(s) 720
AoxI GGCC 5 cut(s) 153, 159, 262, 303, 909
ApeKI GCWGC 8 cut(s) 290, 339, 481, 1136, 1373, 1436, 1577, 1601
ApoI RAATTY 2 cut(s) 407, 569
AspLEI GCGC 4 cut(s) 721, 1577, 1641, 1643
AspS9I GGNCC 3 cut(s) 100, 325, 1699
AsuC2I CCSGG 2 cut(s) 173, 1703
AsuHPI GGTGA 5 cut(s) 131, 356, 1124, 1172, 1784
AsuNHI GCTAGC 1 cut(s) 1747
AvaII GGWCC 3 cut(s) 100, 325, 1699
BalI TGGCCA 2 cut(s) 305, 911
BamHI GGATCC 1 cut(s) 1879
BanI GGYRCC 2 cut(s) 596, 1129
BanII GRGCYC 2 cut(s) 20, 763
BauI CACGAG 1 cut(s) 1469
BbrPI CACGTG 2 cut(s) 182, 193
BbsI GAAGAC 2 cut(s) 1094, 1818
Bbv12I GWGCWC 1 cut(s) 20
BbvI GCAGC 8 cut(s) 302, 326, 493, 1123, 1360, 1423, 1588, 1589
BccI CCATC 6 cut(s) 206, 369, 656, 1126, 1649, 1853
BcgI CGANNNNNNTGC 4 cut(s) 264, 298, 374, 408
BciT130I CCWGG 2 cut(s) 1227, 1590
BclI TGATCA 1 cut(s) 991
BcnI CCSGG 2 cut(s) 173, 1703
BcoDI GTCTC 3 cut(s) 230, 455, 798
BfaI CTAG 6 cut(s) 348, 795, 927, 1020, 1190, 1748
BfmI CTRYAG 1 cut(s) 1850
BfoI RGCGCY 1 cut(s) 722
BfuAI ACCTGC 1 cut(s) 886
BglI GCCNNNNNGGC 1 cut(s) 605
BglII AGATCT 1 cut(s) 1414
BisI GCNGC 9 cut(s) 291, 340, 482, 1137, 1374, 1437, 1578, 1602, 1710
BlsI GCNGC 9 cut(s) 292, 341, 483, 1138, 1375, 1438, 1579, 1603, 1711
Bme1390I CCNGG 4 cut(s) 173, 1227, 1590, 1703
Bme18I GGWCC 3 cut(s) 100, 325, 1699
BmgT120I GGNCC 3 cut(s) 100, 325, 1699
BmiI GGNNCC 7 cut(s) 327, 598, 762, 1131, 1700, 1701, 1881
BmrFI CCNGG 4 cut(s) 173, 1227, 1590, 1703
BmrI ACTGGG 1 cut(s) 198
BmsI GCATC 5 cut(s) 185, 932, 1500, 1613, 1677
BmtI GCTAGC 1 cut(s) 1751
BmuI ACTGGG 1 cut(s) 198
BpiI GAAGAC 2 cut(s) 1094, 1818
BpuEI CTTGAG 1 cut(s) 497
BpuMI CCSGG 2 cut(s) 173, 1703
BsaAI YACGTR 3 cut(s) 182, 193, 1787
BsaBI GATNNNNATC 2 cut(s) 1413, 1779
BsaI GGTCTC 1 cut(s) 230
BsaJI CCNNGG 5 cut(s) 96, 156, 890, 1226, 1308
BsaXI ACNNNNNCTCC 2 cut(s) 942, 972
Bsc4I CCNNNNNNNGG 4 cut(s) 151, 907, 1388, 1708
Bse1I ACTGG 1 cut(s) 204
Bse3DI GCAATG 2 cut(s) 1344, 1557
Bse8I GATNNNNATC 2 cut(s) 1413, 1779
BseBI CCWGG 2 cut(s) 1227, 1590
BseDI CCNNGG 5 cut(s) 96, 156, 890, 1226, 1308
BseGI GGATG 5 cut(s) 460, 994, 1515, 1604, 1660
BseJI GATNNNNATC 2 cut(s) 1413, 1779
BseLI CCNNNNNNNGG 4 cut(s) 151, 907, 1388, 1708
BseMI GCAATG 2 cut(s) 1344, 1557
BseMII CTCAG 1 cut(s) 225
BseNI ACTGG 1 cut(s) 204
BsePI GCGCGC 1 cut(s) 1639
BseRI GAGGAG 8 cut(s) 67, 70, 73, 76, 107, 189, 273, 707
BseXI GCAGC 8 cut(s) 302, 326, 493, 1123, 1360, 1423, 1588, 1589
BseYI CCCAGC 1 cut(s) 268
Bsh1236I CGCG 2 cut(s) 738, 1641
Bsh1285I CGRYCG 1 cut(s) 616
BshFI GGCC 5 cut(s) 155, 161, 264, 305, 911
BshNI GGYRCC 2 cut(s) 596, 1129
BsiEI CGRYCG 1 cut(s) 616
BsiHKAI GWGCWC 1 cut(s) 20
BsiSI CCGG 3 cut(s) 152, 172, 1703
BslFI GGGAC 2 cut(s) 1616, 1685
BslI CCNNNNNNNGG 4 cut(s) 151, 907, 1388, 1708
BsmAI GTCTC 3 cut(s) 230, 455, 798
BsmFI GGGAC 2 cut(s) 1616, 1685
BsmI GAATGC 2 cut(s) 282, 1339
BsnI GGCC 5 cut(s) 155, 161, 264, 305, 911
Bso31I GGTCTC 1 cut(s) 230
Bsp1286I GDGCHC 2 cut(s) 20, 763
Bsp1407I TGTACA 1 cut(s) 1146
Bsp19I CCATGG 3 cut(s) 96, 890, 1308
BspACI CCGC 7 cut(s) 616, 738, 1035, 1087, 1134, 1264, 1709
BspANI GGCC 5 cut(s) 155, 161, 264, 305, 911
BspCNI CTCAG 1 cut(s) 226
BspFNI CGCG 2 cut(s) 738, 1641
BspLI GGNNCC 7 cut(s) 327, 598, 762, 1131, 1700, 1701, 1881
BspMI ACCTGC 1 cut(s) 886
BspOI GCTAGC 1 cut(s) 1751
BspPI GGATC 6 cut(s) 705, 892, 1109, 1400, 1769, 1874
BspQI GCTCTTC 1 cut(s) 1204
BspT107I GGYRCC 2 cut(s) 596, 1129
BspTNI GGTCTC 1 cut(s) 230
BsrDI GCAATG 2 cut(s) 1344, 1557
BsrGI TGTACA 1 cut(s) 1146
BsrI ACTGG 1 cut(s) 204
BssECI CCNNGG 5 cut(s) 96, 156, 890, 1226, 1308
BssHII GCGCGC 1 cut(s) 1639
BssSI CACGAG 1 cut(s) 1469
BssT1I CCWWGG 3 cut(s) 96, 890, 1308
Bst2BI CACGAG 1 cut(s) 1469
Bst2UI CCWGG 2 cut(s) 1227, 1590
Bst4CI ACNGT 9 cut(s) 149, 231, 400, 436, 985, 1071, 1237, 1621, 1803
Bst6I CTCTTC 5 cut(s) 29, 94, 127, 796, 1204
BstAPI GCANNNNNTGC 2 cut(s) 1136, 1529
BstAUI TGTACA 1 cut(s) 1146
BstBAI YACGTR 3 cut(s) 182, 193, 1787
BstC8I GCNNGC 7 cut(s) 266, 357, 500, 610, 1089, 1641, 1749
BstDEI CTNAG 2 cut(s) 234, 684
BstDSI CCRYGG 3 cut(s) 96, 890, 1308
BstF5I GGATG 5 cut(s) 460, 994, 1515, 1604, 1660
BstFNI CGCG 2 cut(s) 738, 1641
BstH2I RGCGCY 1 cut(s) 722
BstHHI GCGC 4 cut(s) 721, 1577, 1641, 1643
BstMAI GTCTC 3 cut(s) 230, 455, 798
BstMCI CGRYCG 1 cut(s) 616
BstNI CCWGG 2 cut(s) 1227, 1590
BstNSI RCATGY 1 cut(s) 452
BstSCI CCNGG 4 cut(s) 171, 1225, 1588, 1701
BstSFI CTRYAG 1 cut(s) 1850
BstUI CGCG 2 cut(s) 738, 1641
BstV1I GCAGC 8 cut(s) 302, 326, 493, 1123, 1360, 1423, 1588, 1589
BstV2I GAAGAC 2 cut(s) 1094, 1818
BstX2I RGATCY 4 cut(s) 697, 897, 1414, 1879
BstXI CCANNNNNNTGG 1 cut(s) 374
BstYI RGATCY 4 cut(s) 697, 897, 1414, 1879
BsuRI GGCC 5 cut(s) 155, 161, 264, 305, 911
BtgI CCRYGG 3 cut(s) 96, 890, 1308
BtsCI GGATG 5 cut(s) 460, 994, 1515, 1604, 1660
BtsIMutI CAGTG 3 cut(s) 396, 912, 990
BveI ACCTGC 1 cut(s) 886
Cac8I GCNNGC 7 cut(s) 266, 357, 500, 610, 1089, 1641, 1749
CfoI GCGC 4 cut(s) 721, 1577, 1641, 1643
Cfr13I GGNCC 3 cut(s) 100, 325, 1699
Csp6I GTAC 2 cut(s) 1072, 1147
CspCI CAANNNNNGTGG 6 cut(s) 403, 438, 901, 936, 1366, 1401
CviAII CATG 8 cut(s) 97, 224, 316, 449, 551, 891, 1309, 1769
CviQI GTAC 2 cut(s) 1072, 1147
DdeI CTNAG 2 cut(s) 234, 684
DraIII CACNNNGTG 1 cut(s) 1112
EaeI YGGCCR 2 cut(s) 303, 909
Eam1104I CTCTTC 5 cut(s) 29, 94, 127, 796, 1204
EarI CTCTTC 5 cut(s) 29, 94, 127, 796, 1204
Ecl136II GAGCTC 1 cut(s) 18
Eco130I CCWWGG 3 cut(s) 96, 890, 1308
Eco24I GRGCYC 2 cut(s) 20, 763
Eco31I GGTCTC 1 cut(s) 230
Eco47I GGWCC 3 cut(s) 100, 325, 1699
Eco47III AGCGCT 1 cut(s) 720
Eco53kI GAGCTC 1 cut(s) 18
Eco72I CACGTG 2 cut(s) 182, 193
EcoICRI GAGCTC 1 cut(s) 18
EcoO109I RGGNCCY 1 cut(s) 1699
EcoRII CCWGG 2 cut(s) 1225, 1588
EcoT14I CCWWGG 3 cut(s) 96, 890, 1308
EcoT22I ATGCAT 1 cut(s) 1525
EcoT38I GRGCYC 2 cut(s) 20, 763
ErhI CCWWGG 3 cut(s) 96, 890, 1308
FaeI CATG 8 cut(s) 100, 227, 319, 452, 554, 894, 1312, 1772
FalI AAGNNNNNCTT 4 cut(s) 524, 556, 640, 672
FaqI GGGAC 2 cut(s) 1616, 1685
FatI CATG 8 cut(s) 96, 223, 315, 448, 550, 890, 1308, 1768
FauI CCCGC 2 cut(s) 1080, 1141
FauNDI CATATG 1 cut(s) 369
FbaI TGATCA 1 cut(s) 991
Fnu4HI GCNGC 9 cut(s) 291, 340, 482, 1137, 1374, 1437, 1578, 1602, 1710
FokI GGATG 5 cut(s) 467, 1001, 1522, 1591, 1667
FriOI GRGCYC 2 cut(s) 20, 763
Fsp4HI GCNGC 9 cut(s) 291, 340, 482, 1137, 1374, 1437, 1578, 1602, 1710
FspBI CTAG 6 cut(s) 348, 795, 927, 1020, 1190, 1748
GlaI GCGC 4 cut(s) 720, 1576, 1640, 1642
GluI GCNGC 9 cut(s) 291, 340, 482, 1137, 1374, 1437, 1578, 1602, 1710
GsaI CCCAGC 1 cut(s) 272
HaeII RGCGCY 1 cut(s) 722
HaeIII GGCC 5 cut(s) 155, 161, 264, 305, 911
HapII CCGG 3 cut(s) 152, 172, 1703
HhaI GCGC 4 cut(s) 721, 1577, 1641, 1643
Hin1II CATG 8 cut(s) 100, 227, 319, 452, 554, 894, 1312, 1772
Hin6I GCGC 4 cut(s) 719, 1575, 1639, 1641
HinP1I GCGC 4 cut(s) 719, 1575, 1639, 1641
HindIII AAGCTT 2 cut(s) 353, 473
HinfI GANTC 7 cut(s) 196, 522, 1052, 1409, 1664, 1794, 1868
HpaII CCGG 3 cut(s) 152, 172, 1703
HphI GGTGA 5 cut(s) 131, 356, 1124, 1172, 1784
Hpy166II GTNNAC 3 cut(s) 185, 493, 538
Hpy188III TCNNGA 9 cut(s) 403, 566, 590, 927, 979, 1469, 1502, 1778, 1808
Hpy8I GTNNAC 3 cut(s) 185, 493, 538
HpyAV CCTTC 5 cut(s) 526, 587, 941, 1120, 1423
HpyCH4III ACNGT 9 cut(s) 149, 231, 400, 436, 985, 1071, 1237, 1621, 1803
HpyCH4IV ACGT 5 cut(s) 181, 192, 885, 1303, 1786
HpyF3I CTNAG 2 cut(s) 234, 684
HpySE526I ACGT 5 cut(s) 181, 192, 885, 1303, 1786
Hsp92II CATG 8 cut(s) 100, 227, 319, 452, 554, 894, 1312, 1772
HspAI GCGC 4 cut(s) 719, 1575, 1639, 1641
KflI GGGWCCC 1 cut(s) 1699
Ksp22I TGATCA 1 cut(s) 991
LguI GCTCTTC 1 cut(s) 1204
LmnI GCTCC 5 cut(s) 215, 547, 766, 950, 1021
Lsp1109I GCAGC 8 cut(s) 302, 326, 493, 1123, 1360, 1423, 1588, 1589
LweI GCATC 5 cut(s) 185, 932, 1500, 1613, 1677
MaeI CTAG 6 cut(s) 348, 795, 927, 1020, 1190, 1748
MaeII ACGT 5 cut(s) 181, 192, 885, 1303, 1786
MaeIII GTNAC 2 cut(s) 193, 712
MfeI CAATTG 1 cut(s) 1713
MflI RGATCY 4 cut(s) 697, 897, 1414, 1879
MhlI GDGCHC 2 cut(s) 20, 763
MlsI TGGCCA 2 cut(s) 305, 911
MluCI AATT 7 cut(s) 407, 569, 808, 1140, 1150, 1545, 1713
MluNI TGGCCA 2 cut(s) 305, 911
MlyI GAGTC 2 cut(s) 190, 1061
MmeI TCCRAC 2 cut(s) 303, 1279
Mox20I TGGCCA 2 cut(s) 305, 911
Mph1103I ATGCAT 1 cut(s) 1525
MscI TGGCCA 2 cut(s) 305, 911
MseI TTAA 3 cut(s) 33, 309, 771
MslI CAYNNNNRTG 3 cut(s) 453, 1245, 1518
Msp20I TGGCCA 2 cut(s) 305, 911
MspA1I CMGCKG 2 cut(s) 268, 1136
MspI CCGG 3 cut(s) 152, 172, 1703
MspR9I CCNGG 4 cut(s) 173, 1227, 1590, 1703
MunI CAATTG 1 cut(s) 1713
Mva1269I GAATGC 2 cut(s) 282, 1339
MvaI CCWGG 2 cut(s) 1227, 1590
MvnI CGCG 2 cut(s) 738, 1641
NciI CCSGG 2 cut(s) 173, 1703
NcoI CCATGG 3 cut(s) 96, 890, 1308
NdeI CATATG 1 cut(s) 369
NheI GCTAGC 1 cut(s) 1747
NlaIII CATG 8 cut(s) 100, 227, 319, 452, 554, 894, 1312, 1772
NlaIV GGNNCC 7 cut(s) 327, 598, 762, 1131, 1700, 1701, 1881
NmeAIII GCCGAG 1 cut(s) 137
NmuCI GTSAC 1 cut(s) 193
NsiI ATGCAT 1 cut(s) 1525
NspI RCATGY 1 cut(s) 452
PaqCI CACCTGC 1 cut(s) 886
PauI GCGCGC 1 cut(s) 1639
PciI ACATGT 1 cut(s) 448
PciSI GCTCTTC 1 cut(s) 1204
PctI GAATGC 2 cut(s) 282, 1339
PfeI GAWTC 5 cut(s) 522, 1409, 1664, 1794, 1868
PflMI CCANNNNNTGG 2 cut(s) 907, 1388
PkrI GCNGC 9 cut(s) 292, 341, 483, 1138, 1375, 1438, 1579, 1603, 1711
PleI GAGTC 2 cut(s) 190, 1060
PmaCI CACGTG 2 cut(s) 182, 193
PmlI CACGTG 2 cut(s) 182, 193
PpsI GAGTC 2 cut(s) 190, 1060
Ppu21I YACGTR 3 cut(s) 182, 193, 1787
PpuMI RGGWCCY 1 cut(s) 1699
PscI ACATGT 1 cut(s) 448
Psp124BI GAGCTC 1 cut(s) 20
Psp5II RGGWCCY 1 cut(s) 1699
Psp6I CCWGG 2 cut(s) 1225, 1588
PspCI CACGTG 2 cut(s) 182, 193
PspFI CCCAGC 1 cut(s) 268
PspGI CCWGG 2 cut(s) 1225, 1588
PspN4I GGNNCC 7 cut(s) 327, 598, 762, 1131, 1700, 1701, 1881
PspPI GGNCC 3 cut(s) 100, 325, 1699
PspPPI RGGWCCY 1 cut(s) 1699
PsuI RGATCY 4 cut(s) 697, 897, 1414, 1879
PteI GCGCGC 1 cut(s) 1639
PvuII CAGCTG 1 cut(s) 268
RsaI GTAC 2 cut(s) 1073, 1148
RsaNI GTAC 2 cut(s) 1072, 1147
RseI CAYNNNNRTG 3 cut(s) 453, 1245, 1518
SacI GAGCTC 1 cut(s) 20
SapI GCTCTTC 1 cut(s) 1204
SaqAI TTAA 3 cut(s) 33, 309, 771
SatI GCNGC 9 cut(s) 291, 340, 482, 1137, 1374, 1437, 1578, 1602, 1710
Sau96I GGNCC 3 cut(s) 100, 325, 1699
SchI GAGTC 2 cut(s) 190, 1061
ScrFI CCNGG 4 cut(s) 173, 1227, 1590, 1703
SduI GDGCHC 2 cut(s) 20, 763
SfaNI GCATC 5 cut(s) 185, 932, 1500, 1613, 1677
SfcI CTRYAG 1 cut(s) 1850
SinI GGWCC 3 cut(s) 100, 325, 1699
SmiMI CAYNNNNRTG 3 cut(s) 453, 1245, 1518
SmlI CTYRAG 1 cut(s) 476
SmoI CTYRAG 1 cut(s) 476
Sse9I AATT 7 cut(s) 407, 569, 808, 1140, 1150, 1545, 1713
SsiI CCGC 7 cut(s) 616, 738, 1035, 1087, 1134, 1264, 1709
SspMI CTAG 6 cut(s) 348, 795, 927, 1020, 1190, 1748
SstI GAGCTC 1 cut(s) 20
StyD4I CCNGG 4 cut(s) 171, 1225, 1588, 1701
StyI CCWWGG 3 cut(s) 96, 890, 1308
TaaI ACNGT 9 cut(s) 149, 231, 400, 436, 985, 1071, 1237, 1621, 1803
TaiI ACGT 5 cut(s) 184, 195, 888, 1306, 1789
TaqI TCGA 4 cut(s) 274, 384, 444, 1495
TaqII GACCGA 1 cut(s) 1356
TasI AATT 7 cut(s) 407, 569, 808, 1140, 1150, 1545, 1713
TatI WGTACW 1 cut(s) 1146
TauI GCSGC 1 cut(s) 1712
TfiI GAWTC 5 cut(s) 522, 1409, 1664, 1794, 1868
Tru1I TTAA 3 cut(s) 33, 309, 771
Tru9I TTAA 3 cut(s) 33, 309, 771
TscAI CASTG 3 cut(s) 403, 919, 990
TseFI GTSAC 1 cut(s) 193
TseI GCWGC 8 cut(s) 290, 339, 481, 1136, 1373, 1436, 1577, 1601
Tsp45I GTSAC 1 cut(s) 193
TspDTI ATGAA 7 cut(s) 212, 930, 1023, 1139, 1229, 1365, 1442
TspGWI ACGGA 1 cut(s) 1288
TspRI CASTG 3 cut(s) 403, 919, 990
Van91I CCANNNNNTGG 2 cut(s) 907, 1388
VpaK11BI GGWCC 3 cut(s) 100, 325, 1699
XapI RAATTY 2 cut(s) 407, 569
XbaI TCTAGA 1 cut(s) 926
XceI RCATGY 1 cut(s) 452
XcmI CCANNNNNNNNNTGG 2 cut(s) 313, 1315
XspI CTAG 6 cut(s) 348, 795, 927, 1020, 1190, 1748
Zsp2I ATGCAT 1 cut(s) 1525
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.