Rh3DG028000

Phosphoribosylaminoimidazole carboxylase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3D
OG0008753
Physical Location & Seq
Reverse (-)
1882575 .. 1889929
7355 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3DG028000.1

Sequence Viewer

Length: 1713 bp
ATGCTTCAGCAGAGCTCCCTCTTCGCCGCCGCCGATTTCGGGTTCAGGCCGTGTTTGGTTCTCCCCAATAATACCAAAAACCCATTCTTCTCTTCCTCCATGGACCTCAAACCAACCCACACCAATCTCCCAACGACTCGCTCGCTAAACCAGGCCTTGGCTTGCCGGGCGTCACGTGACTCTCACGTGACCCCTCCTCCCAGTGGAGATGGTTTAGCTGCTGTTGTTCATGGATTGTCTGAGACCATTGTGGGTGTTCTTGGAGGAGGCCAGCTGGGTCGGATGCTGTGCCAAGCAGCTTCACAAATGGCTATTAAGGTGATGGTATTGGACCCACAGGAGAGTTGTCCGGCGAGTCGACTTGCCTATGACCATATGGTTGGGAGCTTTGATGACAGTGCCACTGTCCAAGAATTCGCGAAAAGGTGTGGAGTGTTGACGGTGGAAATCGAACATGTGGATGTGGAGACATTGGAGAAGCTTGAGCAGCAAGGAGTAGACTGCCAGCCGAAAGCCTCTACAATCAGAATAATACAGGACAAATATCTTCAGAAGGTTCACTTTTCGCGGCGTGATATTCCACTTCCTGAATTTATGCAGATAGATGATCTGGAAGGTGCCAAGAGGGCAGGCAACCTCTTTGACTATCCTCTAATGATAAAGAGTAAAAGATTAGCTTATGATGGGCGTGGAAATGCTGTTGCTAAGAGTGAGCATGATCTTTCTTCTGCTGTAACAGCTCTTGGAGGGTTTGATCGCGGTTTGTATGTTGAGAAATGGGCCCCTTTTGTAAAGGAGCTGGCCGTCATTGTTGCTAGAGGAAGAGACAATTCTATCGTGTGCTATCCTGTTGTTGAAACTATACACAAGGAAAACATTTGTCACATTGTCAAAGCACCTGCTAACGTGCCATGGAAGATCCGAAAGTTGGCCACTGACATTGCATCTAGAGCTATTAGTTCATTAGAAGGCGCTGGTGTTTTTGCAGTTGAGTTGTTCTTGACAGAGGATGATCAGATTTTGCTAAATGAAGTAGCTCCCAGACCTCACAATAGCGGTCATCACACAATAGAGTCTTGCTACACCTCACAGTATGAACAGCATTTGCGGGCTGTTGTTGGTCTTCCACTTGGTGATCCATCAATGAAAACTCCTGCTGCAATTATGTACAATTTACTTGGTGAAGATGAGGGGGAAGCTGGTTTCCACCTAGCTCATCAAGTGATTGGAAGAGCCTTGGGTATTCCAGGGGCTACTGTTCATTGGTATGATAAGCCAGATATGCGGAAGCAACGGAAAATGGGTCATATTACCATTGTTGGACCTTCCGTGGGCAATGTGGAAAAAGCTCTGGATTCAATGCTAAATGACAAAATATCTGATAGTCGGTCCACTGCCACACCGCGTGTTGGGATCATAATGGGTTCTGATTCAGATCTTCCTGTTATGAAGGATGCTGCAAAAGTTTTGAATATGTTTGAAGTGCCTCACGAGGTTAGGATAGTTTCTGCGCATCGAACTCCCGATTGGATGCATTCTTATGCCTTGTCTGCCCAGGAAAGGGGAATTCAGGTCATCATTGCTGGTGCTGGTGGCGCAGCTCACTTGCCAGGAATGGTAGCTGCATCCACTCCATTACCCGTTATTGGTGTCCCTGTGCGTGCCTCTACATTGGATGGAGTTGATTCGGTTCTATCTATATTGCAGGTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00230 ko01100 ko01110 map00230 map01100 map01110
Pfam Domains
Protein Families
AIRC ATP-grasp

Protein Analysis

570

Amino Acids

61.73

Weight (kDa)

6.24

Isoelectric Point (pI)

42.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RS_preATP-grasp-like PF22660 84 - 179 5.4e-31 Ribonucleotide synthetase preATP-grasp domain
ATP-grasp PF02222 187 - 365 8e-63 ATP-grasp domain
Dala_Dala_lig_C PF07478 210 - 349 2.1e-08 D-ala D-ala ligase C-terminus
PurK_C PF17769 387 - 449 1.1e-17 Phosphoribosylaminoimidazole carboxylase C-terminal domain
AIRC PF00731 469 - 570 5e-44 AIR carboxylase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 907
Acc16I TGCGCA 1 cut(s) 1512
Acc36I ACCTGC 2 cut(s) 907, 1696
AccB1I GGYRCC 1 cut(s) 617
AccB7I CCANNNNNTGG 1 cut(s) 157
AccI GTMKAC 2 cut(s) 358, 498
AccII CGCG 4 cut(s) 419, 568, 759, 1405
AciI CCGC 8 cut(s) 27, 30, 568, 759, 1056, 1108, 1285, 1403
AclWI GGATC 3 cut(s) 913, 1130, 1421
AcoI YGGCCR 2 cut(s) 801, 930
AcsI RAATTY 3 cut(s) 413, 590, 1566
AcuI CTGAAG 1 cut(s) 533
AcvI CACGTG 2 cut(s) 176, 187
AcyI GRCGYC 1 cut(s) 170
AdeI CACNNNGTG 2 cut(s) 1133, 1406
AfaI GTAC 1 cut(s) 1169
AfiI CCNNNNNNNGG 9 cut(s) 39, 157, 203, 928, 1331, 1409, 1560, 1561, 1646
AflIII ACRYGT 1 cut(s) 454
AgsI TTSAA 4 cut(s) 857, 1359, 1471, 1481
AjnI CCWGG 4 cut(s) 150, 1246, 1554, 1609
AjuI GAANNNNNNNTTGG 4 cut(s) 68, 100, 1510, 1542
Alw21I GWGCWC 1 cut(s) 17
Alw26I GTCTC 3 cut(s) 236, 461, 819
AlwI GGATC 3 cut(s) 913, 1130, 1421
AoxI GGCC 6 cut(s) 47, 153, 268, 780, 801, 930
ApaI GGGCCC 1 cut(s) 784
ApeKI GCWGC 7 cut(s) 218, 296, 487, 1157, 1457, 1598, 1622
ApoI RAATTY 3 cut(s) 413, 590, 1566
AspLEI GCGC 3 cut(s) 974, 1513, 1598
AspS9I GGNCC 6 cut(s) 103, 331, 780, 781, 1322, 1389
AsuC2I CCSGG 1 cut(s) 167
AsuHPI GGTGA 3 cut(s) 331, 1145, 1193
AvaII GGWCC 4 cut(s) 103, 331, 1322, 1389
BaeGI GKGCMC 1 cut(s) 784
BalI TGGCCA 1 cut(s) 932
BanI GGYRCC 1 cut(s) 617
BanII GRGCYC 2 cut(s) 17, 784
BauI CACGAG 1 cut(s) 1490
BbrPI CACGTG 2 cut(s) 176, 187
BbsI GAAGAC 1 cut(s) 1115
Bbv12I GWGCWC 1 cut(s) 17
BbvI GCAGC 7 cut(s) 205, 308, 499, 1144, 1444, 1609, 1610
BccI CCATC 5 cut(s) 203, 316, 677, 1147, 1670
BceAI ACGGC 2 cut(s) 34, 788
BciT130I CCWGG 4 cut(s) 152, 1248, 1556, 1611
BclI TGATCA 1 cut(s) 1012
BcnI CCSGG 1 cut(s) 167
BcoDI GTCTC 3 cut(s) 236, 461, 819
BfaI CTAG 3 cut(s) 816, 948, 1211
BfoI RGCGCY 1 cut(s) 975
BfuAI ACCTGC 2 cut(s) 907, 1696
BglI GCCNNNNNGGC 1 cut(s) 626
BglII AGATCT 1 cut(s) 1435
Bme1390I CCNGG 5 cut(s) 152, 167, 1248, 1556, 1611
Bme18I GGWCC 4 cut(s) 103, 331, 1322, 1389
BmgT120I GGNCC 6 cut(s) 103, 331, 780, 781, 1322, 1389
BmiI GGNNCC 4 cut(s) 333, 619, 782, 783
BmrFI CCNGG 5 cut(s) 152, 167, 1248, 1556, 1611
BmrI ACTGGG 1 cut(s) 195
BmsI GCATC 6 cut(s) 273, 953, 1444, 1521, 1522, 1634
BmuI ACTGGG 1 cut(s) 195
BpiI GAAGAC 1 cut(s) 1115
BpuEI CTTGAG 1 cut(s) 503
BpuMI CCSGG 1 cut(s) 167
BsaAI YACGTR 2 cut(s) 176, 187
BsaBI GATNNNNATC 1 cut(s) 1434
BsaHI GRCGYC 1 cut(s) 170
BsaI GGTCTC 1 cut(s) 236
BsaJI CCNNGG 7 cut(s) 99, 156, 911, 1236, 1247, 1329, 1554
BsaXI ACNNNNNCTCC 2 cut(s) 181, 211
Bsc4I CCNNNNNNNGG 9 cut(s) 39, 157, 203, 928, 1331, 1409, 1560, 1561, 1646
Bse1I ACTGG 1 cut(s) 201
Bse3DI GCAATG 3 cut(s) 939, 1342, 1578
Bse8I GATNNNNATC 1 cut(s) 1434
BseBI CCWGG 4 cut(s) 152, 1248, 1556, 1611
BseDI CCNNGG 7 cut(s) 99, 156, 911, 1236, 1247, 1329, 1554
BseGI GGATG 7 cut(s) 288, 466, 1015, 1459, 1536, 1625, 1681
BseJI GATNNNNATC 1 cut(s) 1434
BseLI CCNNNNNNNGG 9 cut(s) 39, 157, 203, 928, 1331, 1409, 1560, 1561, 1646
BseMI GCAATG 3 cut(s) 939, 1342, 1578
BseMII CTCAG 1 cut(s) 231
BseNI ACTGG 1 cut(s) 201
BseRI GAGGAG 2 cut(s) 186, 279
BseSI GKGCMC 1 cut(s) 784
BseXI GCAGC 7 cut(s) 205, 308, 499, 1144, 1444, 1609, 1610
BseYI CCCAGC 1 cut(s) 274
Bsh1236I CGCG 4 cut(s) 419, 568, 759, 1405
BshFI GGCC 6 cut(s) 49, 155, 270, 782, 803, 932
BshNI GGYRCC 1 cut(s) 617
BsiHKAI GWGCWC 1 cut(s) 17
BsiSI CCGG 2 cut(s) 166, 350
BslFI GGGAC 1 cut(s) 1637
BslI CCNNNNNNNGG 9 cut(s) 39, 157, 203, 928, 1331, 1409, 1560, 1561, 1646
BsmAI GTCTC 3 cut(s) 236, 461, 819
BsmFI GGGAC 1 cut(s) 1637
BsmI GAATGC 1 cut(s) 1534
BsnI GGCC 6 cut(s) 49, 155, 270, 782, 803, 932
Bso31I GGTCTC 1 cut(s) 236
Bsp120I GGGCCC 1 cut(s) 780
Bsp1286I GDGCHC 2 cut(s) 17, 784
Bsp1407I TGTACA 1 cut(s) 1167
Bsp143I GATC 8 cut(s) 607, 718, 754, 918, 1012, 1135, 1413, 1435
Bsp19I CCATGG 2 cut(s) 99, 911
Bsp68I TCGCGA 1 cut(s) 419
BspACI CCGC 8 cut(s) 27, 30, 568, 759, 1056, 1108, 1285, 1403
BspANI GGCC 6 cut(s) 49, 155, 270, 782, 803, 932
BspCNI CTCAG 1 cut(s) 232
BspFNI CGCG 4 cut(s) 419, 568, 759, 1405
BspLI GGNNCC 4 cut(s) 333, 619, 782, 783
BspMI ACCTGC 2 cut(s) 907, 1696
BspPI GGATC 3 cut(s) 913, 1130, 1421
BspQI GCTCTTC 1 cut(s) 1225
BspT107I GGYRCC 1 cut(s) 617
BspTNI GGTCTC 1 cut(s) 236
BsrDI GCAATG 3 cut(s) 939, 1342, 1578
BsrGI TGTACA 1 cut(s) 1167
BsrI ACTGG 1 cut(s) 201
BssECI CCNNGG 7 cut(s) 99, 156, 911, 1236, 1247, 1329, 1554
BssMI GATC 8 cut(s) 607, 718, 754, 918, 1012, 1135, 1413, 1435
BssNI GRCGYC 1 cut(s) 170
BssSI CACGAG 1 cut(s) 1490
BssT1I CCWWGG 4 cut(s) 99, 156, 911, 1236
Bst2BI CACGAG 1 cut(s) 1490
Bst2UI CCWGG 4 cut(s) 152, 1248, 1556, 1611
Bst4CI ACNGT 5 cut(s) 398, 406, 442, 1092, 1258
Bst6I CTCTTC 4 cut(s) 26, 97, 817, 1225
BstACI GRCGYC 1 cut(s) 170
BstAUI TGTACA 1 cut(s) 1167
BstBAI YACGTR 2 cut(s) 176, 187
BstC8I GCNNGC 8 cut(s) 143, 163, 272, 506, 631, 801, 1110, 1662
BstDEI CTNAG 2 cut(s) 240, 705
BstDSI CCRYGG 3 cut(s) 99, 911, 1329
BstF5I GGATG 7 cut(s) 288, 466, 1015, 1459, 1536, 1625, 1681
BstFNI CGCG 4 cut(s) 419, 568, 759, 1405
BstH2I RGCGCY 1 cut(s) 975
BstHHI GCGC 3 cut(s) 974, 1513, 1598
BstKTI GATC 8 cut(s) 610, 721, 757, 921, 1015, 1138, 1416, 1438
BstMAI GTCTC 3 cut(s) 236, 461, 819
BstMBI GATC 8 cut(s) 607, 718, 754, 918, 1012, 1135, 1413, 1435
BstMWI GCNNNNNNNGC 8 cut(s) 167, 487, 626, 737, 950, 1282, 1550, 1595
BstNI CCWGG 4 cut(s) 152, 1248, 1556, 1611
BstNSI RCATGY 1 cut(s) 458
BstSCI CCNGG 5 cut(s) 150, 165, 1246, 1554, 1609
BstSLI GKGCMC 1 cut(s) 784
BstUI CGCG 4 cut(s) 419, 568, 759, 1405
BstV1I GCAGC 7 cut(s) 205, 308, 499, 1144, 1444, 1609, 1610
BstV2I GAAGAC 1 cut(s) 1115
BstX2I RGATCY 2 cut(s) 918, 1435
BstXI CCANNNNNNTGG 1 cut(s) 380
BstYI RGATCY 2 cut(s) 918, 1435
BsuRI GGCC 6 cut(s) 49, 155, 270, 782, 803, 932
BtgI CCRYGG 3 cut(s) 99, 911, 1329
BtsCI GGATG 7 cut(s) 288, 466, 1015, 1459, 1536, 1625, 1681
BtsI GCAGTG 1 cut(s) 1392
BtsIMutI CAGTG 5 cut(s) 208, 402, 403, 933, 1392
BtuMI TCGCGA 1 cut(s) 419
BveI ACCTGC 2 cut(s) 907, 1696
Cac8I GCNNGC 8 cut(s) 143, 163, 272, 506, 631, 801, 1110, 1662
CfoI GCGC 3 cut(s) 974, 1513, 1598
Cfr13I GGNCC 6 cut(s) 103, 331, 780, 781, 1322, 1389
CseI GACGC 1 cut(s) 159
Csp6I GTAC 1 cut(s) 1168
CspCI CAANNNNNGTGG 2 cut(s) 922, 957
CviAII CATG 5 cut(s) 100, 230, 455, 716, 912
CviQI GTAC 1 cut(s) 1168
DdeI CTNAG 2 cut(s) 240, 705
DpnI GATC 8 cut(s) 609, 720, 756, 920, 1014, 1137, 1415, 1437
DpnII GATC 8 cut(s) 607, 718, 754, 918, 1012, 1135, 1413, 1435
DraIII CACNNNGTG 2 cut(s) 1133, 1406
EaeI YGGCCR 2 cut(s) 801, 930
Eam1104I CTCTTC 4 cut(s) 26, 97, 817, 1225
EarI CTCTTC 4 cut(s) 26, 97, 817, 1225
Ecl136II GAGCTC 1 cut(s) 15
Eco130I CCWWGG 4 cut(s) 99, 156, 911, 1236
Eco147I AGGCCT 1 cut(s) 155
Eco24I GRGCYC 2 cut(s) 17, 784
Eco31I GGTCTC 1 cut(s) 236
Eco47I GGWCC 4 cut(s) 103, 331, 1322, 1389
Eco53kI GAGCTC 1 cut(s) 15
Eco57I CTGAAG 1 cut(s) 533
Eco72I CACGTG 2 cut(s) 176, 187
EcoICRI GAGCTC 1 cut(s) 15
EcoO109I RGGNCCY 1 cut(s) 781
EcoRI GAATTC 2 cut(s) 413, 1566
EcoRII CCWGG 4 cut(s) 150, 1246, 1554, 1609
EcoT14I CCWWGG 4 cut(s) 99, 156, 911, 1236
EcoT22I ATGCAT 1 cut(s) 1536
EcoT38I GRGCYC 2 cut(s) 17, 784
ErhI CCWWGG 4 cut(s) 99, 156, 911, 1236
FaeI CATG 5 cut(s) 103, 233, 458, 719, 915
FalI AAGNNNNNCTT 4 cut(s) 545, 577, 661, 693
FaqI GGGAC 1 cut(s) 1637
FatI CATG 5 cut(s) 99, 229, 454, 715, 911
FauI CCCGC 1 cut(s) 1101
FauNDI CATATG 1 cut(s) 375
FbaI TGATCA 1 cut(s) 1012
FblI GTMKAC 2 cut(s) 358, 498
FokI GGATG 7 cut(s) 295, 473, 1022, 1466, 1543, 1612, 1688
FriOI GRGCYC 2 cut(s) 17, 784
FspBI CTAG 3 cut(s) 816, 948, 1211
FspI TGCGCA 1 cut(s) 1512
GlaI GCGC 3 cut(s) 973, 1512, 1597
GsaI CCCAGC 1 cut(s) 278
HaeII RGCGCY 1 cut(s) 975
HaeIII GGCC 6 cut(s) 49, 155, 270, 782, 803, 932
HapII CCGG 2 cut(s) 166, 350
HgaI GACGC 1 cut(s) 159
HhaI GCGC 3 cut(s) 974, 1513, 1598
Hin1I GRCGYC 1 cut(s) 170
Hin1II CATG 5 cut(s) 103, 233, 458, 719, 915
Hin6I GCGC 3 cut(s) 972, 1511, 1596
HinP1I GCGC 3 cut(s) 972, 1511, 1596
HincII GTYRAC 2 cut(s) 359, 438
HindII GTYRAC 2 cut(s) 359, 438
HindIII AAGCTT 1 cut(s) 479
HinfI GANTC 7 cut(s) 136, 179, 355, 1073, 1355, 1430, 1685
HpaII CCGG 2 cut(s) 166, 350
HphI GGTGA 3 cut(s) 331, 1145, 1193
Hpy166II GTNNAC 5 cut(s) 359, 438, 499, 559, 1392
Hpy188I TCNGA 9 cut(s) 241, 282, 527, 552, 923, 1017, 1381, 1429, 1435
Hpy188III TCNNGA 8 cut(s) 418, 587, 611, 948, 1000, 1352, 1490, 1523
Hpy8I GTNNAC 5 cut(s) 359, 438, 499, 559, 1392
HpyAV CCTTC 5 cut(s) 547, 608, 962, 1335, 1444
HpyCH4III ACNGT 5 cut(s) 398, 406, 442, 1092, 1258
HpyCH4IV ACGT 3 cut(s) 175, 186, 906
HpyCH4V TGCA 8 cut(s) 598, 944, 986, 1160, 1460, 1534, 1625, 1705
HpyF10VI GCNNNNNNNGC 8 cut(s) 167, 487, 626, 737, 950, 1282, 1550, 1595
HpyF3I CTNAG 2 cut(s) 240, 705
HpySE526I ACGT 3 cut(s) 175, 186, 906
Hsp92I GRCGYC 1 cut(s) 170
Hsp92II CATG 5 cut(s) 103, 233, 458, 719, 915
HspAI GCGC 3 cut(s) 972, 1511, 1596
Ksp22I TGATCA 1 cut(s) 1012
Kzo9I GATC 8 cut(s) 607, 718, 754, 918, 1012, 1135, 1413, 1435
LguI GCTCTTC 1 cut(s) 1225
LmnI GCTCC 4 cut(s) 20, 384, 796, 1042
Lsp1109I GCAGC 7 cut(s) 205, 308, 499, 1144, 1444, 1609, 1610
LweI GCATC 6 cut(s) 273, 953, 1444, 1521, 1522, 1634
MaeI CTAG 3 cut(s) 816, 948, 1211
MaeII ACGT 3 cut(s) 175, 186, 906
MaeIII GTNAC 5 cut(s) 171, 176, 187, 733, 881
MalI GATC 8 cut(s) 609, 720, 756, 920, 1014, 1137, 1415, 1437
MboI GATC 8 cut(s) 607, 718, 754, 918, 1012, 1135, 1413, 1435
MflI RGATCY 2 cut(s) 918, 1435
MhlI GDGCHC 2 cut(s) 17, 784
MlsI TGGCCA 1 cut(s) 932
MluCI AATT 6 cut(s) 413, 590, 829, 1161, 1171, 1566
MluNI TGGCCA 1 cut(s) 932
MlyI GAGTC 4 cut(s) 130, 173, 364, 1082
MmeI TCCRAC 2 cut(s) 260, 1300
Mox20I TGGCCA 1 cut(s) 932
Mph1103I ATGCAT 1 cut(s) 1536
MscI TGGCCA 1 cut(s) 932
MseI TTAA 1 cut(s) 315
MslI CAYNNNNRTG 3 cut(s) 459, 1266, 1539
Msp20I TGGCCA 1 cut(s) 932
MspA1I CMGCKG 1 cut(s) 274
MspI CCGG 2 cut(s) 166, 350
MspR9I CCNGG 5 cut(s) 152, 167, 1248, 1556, 1611
Mva1269I GAATGC 1 cut(s) 1534
MvaI CCWGG 4 cut(s) 152, 1248, 1556, 1611
MvnI CGCG 4 cut(s) 419, 568, 759, 1405
MwoI GCNNNNNNNGC 8 cut(s) 167, 487, 626, 737, 950, 1282, 1550, 1595
NciI CCSGG 1 cut(s) 167
NcoI CCATGG 2 cut(s) 99, 911
NdeI CATATG 1 cut(s) 375
NdeII GATC 8 cut(s) 607, 718, 754, 918, 1012, 1135, 1413, 1435
NlaIII CATG 5 cut(s) 103, 233, 458, 719, 915
NlaIV GGNNCC 4 cut(s) 333, 619, 782, 783
NmuCI GTSAC 4 cut(s) 171, 176, 187, 881
NruI TCGCGA 1 cut(s) 419
NsbI TGCGCA 1 cut(s) 1512
NsiI ATGCAT 1 cut(s) 1536
NspI RCATGY 1 cut(s) 458
PaqCI CACCTGC 1 cut(s) 907
PceI AGGCCT 1 cut(s) 155
PciI ACATGT 1 cut(s) 454
PciSI GCTCTTC 1 cut(s) 1225
PcsI WCGNNNNNNNCGW 1 cut(s) 30
PctI GAATGC 1 cut(s) 1534
PfeI GAWTC 3 cut(s) 1355, 1430, 1685
PflMI CCANNNNNTGG 1 cut(s) 157
PleI GAGTC 4 cut(s) 130, 173, 363, 1081
PmaCI CACGTG 2 cut(s) 176, 187
PmlI CACGTG 2 cut(s) 176, 187
PpsI GAGTC 4 cut(s) 130, 173, 363, 1081
Ppu21I YACGTR 2 cut(s) 176, 187
PscI ACATGT 1 cut(s) 454
Psp124BI GAGCTC 1 cut(s) 17
Psp6I CCWGG 4 cut(s) 150, 1246, 1554, 1609
PspCI CACGTG 2 cut(s) 176, 187
PspFI CCCAGC 1 cut(s) 274
PspGI CCWGG 4 cut(s) 150, 1246, 1554, 1609
PspN4I GGNNCC 4 cut(s) 333, 619, 782, 783
PspOMI GGGCCC 1 cut(s) 780
PspPI GGNCC 6 cut(s) 103, 331, 780, 781, 1322, 1389
PsuI RGATCY 2 cut(s) 918, 1435
PvuII CAGCTG 1 cut(s) 274
RruI TCGCGA 1 cut(s) 419
RsaI GTAC 1 cut(s) 1169
RsaNI GTAC 1 cut(s) 1168
RseI CAYNNNNRTG 3 cut(s) 459, 1266, 1539
SacI GAGCTC 1 cut(s) 17
SalI GTCGAC 1 cut(s) 357
SapI GCTCTTC 1 cut(s) 1225
SaqAI TTAA 1 cut(s) 315
Sau3AI GATC 8 cut(s) 607, 718, 754, 918, 1012, 1135, 1413, 1435
Sau96I GGNCC 6 cut(s) 103, 331, 780, 781, 1322, 1389
SchI GAGTC 4 cut(s) 130, 173, 364, 1082
ScrFI CCNGG 5 cut(s) 152, 167, 1248, 1556, 1611
SduI GDGCHC 2 cut(s) 17, 784
SfaNI GCATC 6 cut(s) 273, 953, 1444, 1521, 1522, 1634
SinI GGWCC 4 cut(s) 103, 331, 1322, 1389
SmiMI CAYNNNNRTG 3 cut(s) 459, 1266, 1539
SmlI CTYRAG 1 cut(s) 482
SmoI CTYRAG 1 cut(s) 482
Sse9I AATT 6 cut(s) 413, 590, 829, 1161, 1171, 1566
SseBI AGGCCT 1 cut(s) 155
SsiI CCGC 8 cut(s) 27, 30, 568, 759, 1056, 1108, 1285, 1403
SspMI CTAG 3 cut(s) 816, 948, 1211
SstI GAGCTC 1 cut(s) 17
StuI AGGCCT 1 cut(s) 155
StyD4I CCNGG 5 cut(s) 150, 165, 1246, 1554, 1609
StyI CCWWGG 4 cut(s) 99, 156, 911, 1236
TaaI ACNGT 5 cut(s) 398, 406, 442, 1092, 1258
TaiI ACGT 3 cut(s) 178, 189, 909
TaqI TCGA 3 cut(s) 358, 450, 1516
TaqII GACCGA 1 cut(s) 1377
TasI AATT 6 cut(s) 413, 590, 829, 1161, 1171, 1566
TatI WGTACW 1 cut(s) 1167
TauI GCSGC 3 cut(s) 29, 32, 571
TfiI GAWTC 3 cut(s) 1355, 1430, 1685
Tru1I TTAA 1 cut(s) 315
Tru9I TTAA 1 cut(s) 315
TscAI CASTG 5 cut(s) 208, 403, 409, 940, 1399
TseFI GTSAC 4 cut(s) 171, 176, 187, 881
TseI GCWGC 7 cut(s) 218, 296, 487, 1157, 1457, 1598, 1622
Tsp45I GTSAC 4 cut(s) 171, 176, 187, 881
TspDTI ATGAA 7 cut(s) 218, 951, 1044, 1110, 1160, 1250, 1463
TspGWI ACGGA 2 cut(s) 1309, 1318
TspRI CASTG 5 cut(s) 208, 403, 409, 940, 1399
Van91I CCANNNNNTGG 1 cut(s) 157
VpaK11BI GGWCC 4 cut(s) 103, 331, 1322, 1389
XapI RAATTY 3 cut(s) 413, 590, 1566
XbaI TCTAGA 1 cut(s) 947
XceI RCATGY 1 cut(s) 458
XmiI GTMKAC 2 cut(s) 358, 498
XspI CTAG 3 cut(s) 816, 948, 1211
Zsp2I ATGCAT 1 cut(s) 1536
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.