pycom04g20110

Phosphoribosylaminoimidazole carboxylase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr4
OG0008753
Physical Location & Seq
Forward (+)
21645380 .. 21649521
4142 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom04g20110.1

Sequence Viewer

Length: 1929 bp
ATGTTCCAACAGAGCTCTGGCTGCTGCGACTCGCTCTTCGCTTCGCCGGAGTTTGGGTTTAGCCCGTGTTTGGCTGCGCCGAAAACGAAAAACGCATTCTCCTGCTCCATGGAAAAGCACAAGCTTTTCACTTCTTCTTCTTCTTCTCTCTCGCTCAAGCAGCAACCCCAAACGAAGCGCAATCCTGTCCTGGCCTGTCGATCATCACGTGACCCTCACGTGATTACTGGGAAAGATGATGTAGCTGTTCATGGAGTTGCTGATGTAATTGTTGGTGTTCTTGGAGGAGGCCAACTGGGTCGGATGTTCTGCCAAGCAGCTTCGCGAATGGCGATTAAAGTGATGGTCTTGGACCCACAAGAGAACTGCCCGGCTAGTGAGCTTGCCCATTATCATATGGTTGGAAGTTTCGATGATAGCGCGACGGTCCAAGAGTTCGCAAAGAGATGTGGAGTGCTGACCGTGGAAATTGAGCATGTGGATGTGGAGACGTTAGAGAAGCTTGAGCAGCAAGGAGTGGATTGCCAACCCAAAGCCTCTACAATCAGAATAATTCAGGATAAGTATCTCCAAAAGGTTCATTTTTCGAAGCATGATATTCCGCTTCCTGAATTCATGCAGATAGATGATCTACAAGGTGCCAAGAGAGCAGGGGACCTCTTTGGCTATCCTCTTATGATAAAAAGTAAAAGGTTAGCTTACGATGGACGTGGAAATGCTGTTGCTAAGAGTGAGGATGAGCTTTCTTCTGCTGTGGCTGCTCTTGGAGGGTTTGATCGTCGCTTATATGTTGAGAAATGGGCCCCATTTGTAAAGGAGCTGGCTGTTATTGTCGCAAGAGGAAGAGACAATTCTATCGTGTGCTACCCTGTTGTTGAAACAATACACAAGGAAAACATTTGTCACATTGTAAGGGCTCCTGCTAACATGTCATGGAAGATCAGAAAGCTGGCCACTGATATTGCATCCAGAGCTGTTAGTTCATTAGAAGGTGCTGGTGTCTTTGCAGTTGAGTTGTTCTTGACAAAGGATGACCAGATTTTGCTAAATGAAGTAGCTCCTAGACCTCACAATAGCGGTCATCACACAATAGAGTCTTGCTACACTTCACAGTATGAACAGCATTTGAGGGCTGTTGTTGGTCTTCCACTTGGTGATCCATCAATGAAAACTCCAGCTGCAATCATGTACAATTTACTTGGCGAAGATGAGGGGGAACCTGGTTTCCTACTAGCTCAGCAGTTGATTGGAAGAGCATTGCGTACTCCAGGGGCCACTGTGCATTGGTATGATAAGCCAGAAATGCGGAAGCAACGGAAGATGGGTCATATCACCATTGTTGGACCTTCCCTGGGAAACGTCGAAAAACTGCTAGAATCGATGCTAAATGAAGAAAGATTGGATAGTCAGTCTGCAGTCACACCGCGTGTTGGTATCGTAATGGGCTCTGATTCAGATCTTCCTGTTATGAAAGATGCTGCAAAGATTTTAAATATGTTTGGAGTACCCAATGAGGTGAGAATAGTTTCAGCACATCGAACTCCTGAATTGATGTATTCTTATGCCTTGTCTGCTCGGGAGAGAGGCATTCAGGTCATCATTGCTGGTGCTGGTGGTGCTGCTCACTTGCCAGGCATGGTAGCTGCCCTCACTCCTTTGCCCGTTATCGGTGTCCCTGTGCGTGCTTCTACATTGGATGGAATCGATTCTCTTTTGTCCATCGTGCAGATGCCGAGAGGGGTCCCAGTTGCAACAGTAGCTGTAAACAACGCCACCAACGCTGGTTTGCTAGCAGTTAGGATATTGGGTGTTTGTGATGCCGATCTAGTATCAAGAATGTCCCAGTATCAAGAAAACACAAGGGATGAAGTTTTGACAAAGGCGGAGAAACTACAGAAAGATGGATGGGAGTCGTATTTGAATCCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00230 ko01100 ko01110 map00230 map01100 map01110
Pfam Domains
Protein Families
AIRC ATP-grasp

Protein Analysis

643

Amino Acids

69.9

Weight (kDa)

6.54

Isoelectric Point (pI)

47.09

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RS_preATP-grasp-like PF22660 91 - 186 8.1e-32 Ribonucleotide synthetase preATP-grasp domain
CPSase_L_D2 PF02786 187 - 358 1.1e-06 Carbamoyl-phosphate synthase L chain, ATP binding domain
ATP-grasp PF02222 194 - 372 6.3e-63 ATP-grasp domain
Dala_Dala_lig_C PF07478 217 - 356 1.3e-09 D-ala D-ala ligase C-terminus
PurK_C PF17769 394 - 455 1.1e-17 Phosphoribosylaminoimidazole carboxylase C-terminal domain
AIRC PF00731 476 - 622 7e-65 AIR carboxylase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 638
AccII CGCG 3 cut(s) 325, 422, 1426
AciI CCGC 5 cut(s) 602, 1077, 1306, 1424, 1883
AclWI GGATC 1 cut(s) 1151
AcoI YGGCCR 1 cut(s) 951
AcsI RAATTY 1 cut(s) 611
AcvI CACGTG 2 cut(s) 209, 220
AdeI CACNNNGTG 2 cut(s) 1154, 1427
AfaI GTAC 3 cut(s) 1190, 1264, 1506
AfiI CCNNNNNNNGG 5 cut(s) 53, 70, 1352, 1430, 1667
AflIII ACRYGT 1 cut(s) 927
AgsI TTSAA 2 cut(s) 878, 1921
AjiI CACGTC 1 cut(s) 710
AjnI CCWGG 5 cut(s) 189, 1219, 1267, 1350, 1630
AloI GAACNNNNNNTCC 2 cut(s) 1209, 1241
Alw21I GWGCWC 1 cut(s) 17
Alw26I GTCTC 2 cut(s) 482, 840
AlwI GGATC 1 cut(s) 1151
AlwNI CAGNNNCTG 1 cut(s) 1760
Ama87I CYCGRG 1 cut(s) 1575
AoxI GGCC 5 cut(s) 192, 289, 801, 951, 1272
ApaI GGGCCC 1 cut(s) 805
ApoI RAATTY 1 cut(s) 611
ArsI GACNNNNNNTTYG 2 cut(s) 20, 52
Asp700I GAANNNNTTC 2 cut(s) 1525, 1705
AspLEI GCGC 3 cut(s) 79, 180, 422
AspS9I GGNCC 8 cut(s) 352, 427, 655, 801, 802, 1272, 1343, 1741
AsuC2I CCSGG 1 cut(s) 371
AsuHPI GGTGA 3 cut(s) 1166, 1324, 1528
AsuII TTCGAA 1 cut(s) 587
AsuNHI GCTAGC 1 cut(s) 1789
AvaI CYCGRG 1 cut(s) 1575
AvaII GGWCC 5 cut(s) 352, 427, 655, 1343, 1741
BaeGI GKGCMC 1 cut(s) 805
BalI TGGCCA 1 cut(s) 953
BanI GGYRCC 1 cut(s) 638
BanII GRGCYC 4 cut(s) 17, 805, 919, 1448
BbrPI CACGTG 2 cut(s) 209, 220
BbsI GAAGAC 1 cut(s) 1136
Bbv12I GWGCWC 1 cut(s) 17
BccI CCATC 8 cut(s) 337, 698, 1168, 1315, 1691, 1727, 1895, 1899
BciT130I CCWGG 5 cut(s) 191, 1221, 1269, 1352, 1632
BcnI CCSGG 1 cut(s) 371
BcoDI GTCTC 2 cut(s) 482, 840
BfaI CTAG 6 cut(s) 375, 1062, 1232, 1373, 1790, 1826
BfmI CTRYAG 2 cut(s) 1413, 1892
BglII AGATCT 1 cut(s) 1456
BlpI GCTNAGC 1 cut(s) 1236
Bme1390I CCNGG 6 cut(s) 191, 371, 1221, 1269, 1352, 1632
Bme18I GGWCC 5 cut(s) 352, 427, 655, 1343, 1741
BmeT110I CYCGRG 1 cut(s) 1575
BmgBI CACGTC 1 cut(s) 710
BmgT120I GGNCC 8 cut(s) 352, 427, 655, 801, 802, 1272, 1343, 1741
BmrFI CCNGG 6 cut(s) 191, 371, 1221, 1269, 1352, 1632
BmrI ACTGGG 4 cut(s) 237, 305, 1739, 1837
BmsI GCATC 5 cut(s) 974, 1371, 1465, 1719, 1807
BmtI GCTAGC 1 cut(s) 1793
BmuI ACTGGG 4 cut(s) 237, 305, 1739, 1837
BpiI GAAGAC 1 cut(s) 1136
BpmI CTGGAG 2 cut(s) 1158, 1251
Bpu1102I GCTNAGC 1 cut(s) 1236
Bpu14I TTCGAA 1 cut(s) 587
BpuEI CTTGAG 2 cut(s) 140, 524
BpuMI CCSGG 1 cut(s) 371
Bsa29I ATCGAT 2 cut(s) 1379, 1704
BsaAI YACGTR 2 cut(s) 209, 220
BsaBI GATNNNNATC 3 cut(s) 564, 1455, 1821
BsaJI CCNNGG 5 cut(s) 108, 462, 1268, 1350, 1351
BsaXI ACNNNNNCTCC 4 cut(s) 41, 71, 83, 113
Bsc4I CCNNNNNNNGG 5 cut(s) 53, 70, 1352, 1430, 1667
Bse1I ACTGG 4 cut(s) 232, 300, 1745, 1843
Bse3DI GCAATG 2 cut(s) 1256, 1599
Bse8I GATNNNNATC 3 cut(s) 564, 1455, 1821
BseBI CCWGG 5 cut(s) 191, 1221, 1269, 1352, 1632
BseCI ATCGAT 2 cut(s) 1379, 1704
BseDI CCNNGG 5 cut(s) 108, 462, 1268, 1350, 1351
BseGI GGATG 8 cut(s) 309, 487, 742, 965, 1036, 1702, 1870, 1910
BseJI GATNNNNATC 3 cut(s) 564, 1455, 1821
BseLI CCNNNNNNNGG 5 cut(s) 53, 70, 1352, 1430, 1667
BseMI GCAATG 2 cut(s) 1256, 1599
BseMII CTCAG 1 cut(s) 1250
BseNI ACTGG 4 cut(s) 232, 300, 1745, 1843
BseRI GAGGAG 1 cut(s) 300
BseSI GKGCMC 1 cut(s) 805
BsgI GTGCAG 1 cut(s) 1745
Bsh1236I CGCG 3 cut(s) 325, 422, 1426
BshFI GGCC 5 cut(s) 194, 291, 803, 953, 1274
BshNI GGYRCC 1 cut(s) 638
BshVI ATCGAT 2 cut(s) 1379, 1704
BsiHKAI GWGCWC 1 cut(s) 17
BsiHKCI CYCGRG 1 cut(s) 1575
BsiSI CCGG 2 cut(s) 47, 371
BslFI GGGAC 4 cut(s) 668, 1658, 1727, 1825
BslI CCNNNNNNNGG 5 cut(s) 53, 70, 1352, 1430, 1667
BsmAI GTCTC 2 cut(s) 482, 840
BsmBI CGTCTC 1 cut(s) 482
BsmFI GGGAC 4 cut(s) 668, 1658, 1727, 1825
BsmI GAATGC 2 cut(s) 95, 1587
BsnI GGCC 5 cut(s) 194, 291, 803, 953, 1274
BsoBI CYCGRG 1 cut(s) 1575
Bsp119I TTCGAA 1 cut(s) 587
Bsp120I GGGCCC 1 cut(s) 801
Bsp1286I GDGCHC 4 cut(s) 17, 805, 919, 1448
Bsp1407I TGTACA 1 cut(s) 1188
Bsp143I GATC 7 cut(s) 200, 628, 775, 939, 1156, 1456, 1822
Bsp1720I GCTNAGC 1 cut(s) 1236
Bsp19I CCATGG 1 cut(s) 108
Bsp68I TCGCGA 1 cut(s) 325
BspACI CCGC 5 cut(s) 602, 1077, 1306, 1424, 1883
BspANI GGCC 5 cut(s) 194, 291, 803, 953, 1274
BspCNI CTCAG 1 cut(s) 1249
BspDI ATCGAT 2 cut(s) 1379, 1704
BspFNI CGCG 3 cut(s) 325, 422, 1426
BspMAI CTGCAG 1 cut(s) 1417
BspOI GCTAGC 1 cut(s) 1793
BspPI GGATC 1 cut(s) 1151
BspQI GCTCTTC 2 cut(s) 41, 1246
BspT104I TTCGAA 1 cut(s) 587
BspT107I GGYRCC 1 cut(s) 638
BsrDI GCAATG 2 cut(s) 1256, 1599
BsrGI TGTACA 1 cut(s) 1188
BsrI ACTGG 4 cut(s) 232, 300, 1745, 1843
BssECI CCNNGG 5 cut(s) 108, 462, 1268, 1350, 1351
BssMI GATC 7 cut(s) 200, 628, 775, 939, 1156, 1456, 1822
BssT1I CCWWGG 1 cut(s) 108
Bst2UI CCWGG 5 cut(s) 191, 1221, 1269, 1352, 1632
Bst4CI ACNGT 5 cut(s) 427, 463, 1113, 1279, 1756
Bst6I CTCTTC 3 cut(s) 41, 838, 1246
BstAUI TGTACA 1 cut(s) 1188
BstBAI YACGTR 2 cut(s) 209, 220
BstBI TTCGAA 1 cut(s) 587
BstC8I GCNNGC 5 cut(s) 384, 822, 951, 1683, 1791
BstDEI CTNAG 2 cut(s) 726, 1236
BstDSI CCRYGG 2 cut(s) 108, 462
BstF5I GGATG 8 cut(s) 309, 487, 742, 965, 1036, 1702, 1870, 1910
BstFNI CGCG 3 cut(s) 325, 422, 1426
BstHHI GCGC 3 cut(s) 79, 180, 422
BstKTI GATC 7 cut(s) 203, 631, 778, 942, 1159, 1459, 1825
BstMAI GTCTC 2 cut(s) 482, 840
BstMBI GATC 7 cut(s) 200, 628, 775, 939, 1156, 1456, 1822
BstNI CCWGG 5 cut(s) 191, 1221, 1269, 1352, 1632
BstNSI RCATGY 2 cut(s) 479, 931
BstSCI CCNGG 6 cut(s) 189, 369, 1219, 1267, 1350, 1630
BstSFI CTRYAG 2 cut(s) 1413, 1892
BstSLI GKGCMC 1 cut(s) 805
BstUI CGCG 3 cut(s) 325, 422, 1426
BstV2I GAAGAC 1 cut(s) 1136
BstX2I RGATCY 1 cut(s) 1456
BstYI RGATCY 1 cut(s) 1456
Bsu15I ATCGAT 2 cut(s) 1379, 1704
BsuRI GGCC 5 cut(s) 194, 291, 803, 953, 1274
BsuTUI ATCGAT 2 cut(s) 1379, 1704
BtgI CCRYGG 2 cut(s) 108, 462
BtrI CACGTC 1 cut(s) 710
BtsCI GGATG 8 cut(s) 309, 487, 742, 965, 1036, 1702, 1870, 1910
BtsIMutI CAGTG 2 cut(s) 954, 1275
BtuMI TCGCGA 1 cut(s) 325
Cac8I GCNNGC 5 cut(s) 384, 822, 951, 1683, 1791
CaiI CAGNNNCTG 1 cut(s) 1760
CfoI GCGC 3 cut(s) 79, 180, 422
Cfr13I GGNCC 8 cut(s) 352, 427, 655, 801, 802, 1272, 1343, 1741
ClaI ATCGAT 2 cut(s) 1379, 1704
CsiI ACCWGGT 1 cut(s) 1219
Csp6I GTAC 3 cut(s) 1189, 1263, 1505
CspCI CAANNNNNGTGG 2 cut(s) 943, 978
CviAII CATG 9 cut(s) 109, 251, 476, 593, 616, 928, 933, 1186, 1636
CviQI GTAC 3 cut(s) 1189, 1263, 1505
DdeI CTNAG 2 cut(s) 726, 1236
DpnI GATC 7 cut(s) 202, 630, 777, 941, 1158, 1458, 1824
DpnII GATC 7 cut(s) 200, 628, 775, 939, 1156, 1456, 1822
DraI TTTAAA 1 cut(s) 1491
DraIII CACNNNGTG 2 cut(s) 1154, 1427
EaeI YGGCCR 1 cut(s) 951
Eam1104I CTCTTC 3 cut(s) 41, 838, 1246
EarI CTCTTC 3 cut(s) 41, 838, 1246
EciI GGCGGA 1 cut(s) 1898
Ecl136II GAGCTC 1 cut(s) 15
Eco130I CCWWGG 1 cut(s) 108
Eco24I GRGCYC 4 cut(s) 17, 805, 919, 1448
Eco47I GGWCC 5 cut(s) 352, 427, 655, 1343, 1741
Eco53kI GAGCTC 1 cut(s) 15
Eco72I CACGTG 2 cut(s) 209, 220
Eco88I CYCGRG 1 cut(s) 1575
EcoICRI GAGCTC 1 cut(s) 15
EcoO109I RGGNCCY 3 cut(s) 655, 802, 1741
EcoRI GAATTC 1 cut(s) 611
EcoRII CCWGG 5 cut(s) 189, 1219, 1267, 1350, 1630
EcoT14I CCWWGG 1 cut(s) 108
EcoT38I GRGCYC 4 cut(s) 17, 805, 919, 1448
ErhI CCWWGG 1 cut(s) 108
Esp3I CGTCTC 1 cut(s) 482
FaeI CATG 9 cut(s) 112, 254, 479, 596, 619, 931, 936, 1189, 1639
FalI AAGNNNNNCTT 2 cut(s) 682, 714
FaqI GGGAC 4 cut(s) 668, 1658, 1727, 1825
FatI CATG 9 cut(s) 108, 250, 475, 592, 615, 927, 932, 1185, 1635
FauNDI CATATG 1 cut(s) 396
FokI GGATG 8 cut(s) 316, 494, 749, 952, 1043, 1709, 1877, 1917
FriOI GRGCYC 4 cut(s) 17, 805, 919, 1448
FspBI CTAG 6 cut(s) 375, 1062, 1232, 1373, 1790, 1826
GlaI GCGC 3 cut(s) 78, 179, 421
GsuI CTGGAG 2 cut(s) 1158, 1251
HaeIII GGCC 5 cut(s) 194, 291, 803, 953, 1274
HapII CCGG 2 cut(s) 47, 371
HhaI GCGC 3 cut(s) 79, 180, 422
Hin1II CATG 9 cut(s) 112, 254, 479, 596, 619, 931, 936, 1189, 1639
Hin6I GCGC 3 cut(s) 77, 178, 420
HinP1I GCGC 3 cut(s) 77, 178, 420
HindIII AAGCTT 2 cut(s) 122, 500
HinfI GANTC 8 cut(s) 29, 1094, 1376, 1451, 1701, 1706, 1910, 1921
HpaII CCGG 2 cut(s) 47, 371
HphI GGTGA 3 cut(s) 1166, 1324, 1528
Hpy166II GTNNAC 1 cut(s) 1765
Hpy188I TCNGA 5 cut(s) 303, 548, 944, 1450, 1456
Hpy188III TCNNGA 9 cut(s) 324, 557, 608, 969, 1021, 1544, 1577, 1833, 1850
Hpy8I GTNNAC 1 cut(s) 1765
Hpy99I CGWCG 3 cut(s) 427, 783, 1364
HpyAV CCTTC 2 cut(s) 983, 1356
HpyCH4III ACNGT 5 cut(s) 427, 463, 1113, 1279, 1756
HpyCH4IV ACGT 5 cut(s) 208, 219, 491, 709, 1359
HpyCH4V TGCA 9 cut(s) 619, 965, 1007, 1181, 1282, 1415, 1481, 1726, 1751
HpyF3I CTNAG 2 cut(s) 726, 1236
HpySE526I ACGT 5 cut(s) 208, 219, 491, 709, 1359
Hsp92II CATG 9 cut(s) 112, 254, 479, 596, 619, 931, 936, 1189, 1639
HspAI GCGC 3 cut(s) 77, 178, 420
KflI GGGWCCC 1 cut(s) 1741
Kzo9I GATC 7 cut(s) 200, 628, 775, 939, 1156, 1456, 1822
LguI GCTCTTC 2 cut(s) 41, 1246
LmnI GCTCC 4 cut(s) 110, 817, 922, 1063
LweI GCATC 5 cut(s) 974, 1371, 1465, 1719, 1807
MabI ACCWGGT 1 cut(s) 1219
MaeI CTAG 6 cut(s) 375, 1062, 1232, 1373, 1790, 1826
MaeII ACGT 5 cut(s) 208, 219, 491, 709, 1359
MaeIII GTNAC 3 cut(s) 209, 902, 1417
MalI GATC 7 cut(s) 202, 630, 777, 941, 1158, 1458, 1824
MboI GATC 7 cut(s) 200, 628, 775, 939, 1156, 1456, 1822
MflI RGATCY 1 cut(s) 1456
MhlI GDGCHC 4 cut(s) 17, 805, 919, 1448
MlsI TGGCCA 1 cut(s) 953
MluCI AATT 7 cut(s) 267, 468, 552, 611, 850, 1192, 1547
MluNI TGGCCA 1 cut(s) 953
MlyI GAGTC 3 cut(s) 23, 1103, 1919
MmeI TCCRAC 4 cut(s) 31, 281, 382, 1321
Mox20I TGGCCA 1 cut(s) 953
MroXI GAANNNNTTC 2 cut(s) 1525, 1705
MscI TGGCCA 1 cut(s) 953
MseI TTAA 2 cut(s) 336, 1490
MslI CAYNNNNRTG 2 cut(s) 480, 1287
Msp20I TGGCCA 1 cut(s) 953
MspA1I CMGCKG 1 cut(s) 1178
MspI CCGG 2 cut(s) 47, 371
MspR9I CCNGG 6 cut(s) 191, 371, 1221, 1269, 1352, 1632
Mva1269I GAATGC 2 cut(s) 95, 1587
MvaI CCWGG 5 cut(s) 191, 1221, 1269, 1352, 1632
MvnI CGCG 3 cut(s) 325, 422, 1426
NciI CCSGG 1 cut(s) 371
NcoI CCATGG 1 cut(s) 108
NdeI CATATG 1 cut(s) 396
NdeII GATC 7 cut(s) 200, 628, 775, 939, 1156, 1456, 1822
NheI GCTAGC 1 cut(s) 1789
NlaIII CATG 9 cut(s) 112, 254, 479, 596, 619, 931, 936, 1189, 1639
NmeAIII GCCGAG 1 cut(s) 1758
NmuCI GTSAC 3 cut(s) 209, 902, 1417
NruI TCGCGA 1 cut(s) 325
NspI RCATGY 2 cut(s) 479, 931
NspV TTCGAA 1 cut(s) 587
PasI CCCWGGG 1 cut(s) 1351
PciI ACATGT 1 cut(s) 927
PciSI GCTCTTC 2 cut(s) 41, 1246
PcsI WCGNNNNNNNCGW 2 cut(s) 205, 329
PctI GAATGC 2 cut(s) 95, 1587
PdmI GAANNNNTTC 2 cut(s) 1525, 1705
PfeI GAWTC 5 cut(s) 1376, 1451, 1701, 1706, 1921
PleI GAGTC 3 cut(s) 23, 1102, 1918
PmaCI CACGTG 2 cut(s) 209, 220
PmlI CACGTG 2 cut(s) 209, 220
PpsI GAGTC 3 cut(s) 23, 1102, 1918
Ppu21I YACGTR 2 cut(s) 209, 220
PpuMI RGGWCCY 2 cut(s) 655, 1741
PscI ACATGT 1 cut(s) 927
Psp124BI GAGCTC 1 cut(s) 17
Psp5II RGGWCCY 2 cut(s) 655, 1741
Psp6I CCWGG 5 cut(s) 189, 1219, 1267, 1350, 1630
PspCI CACGTG 2 cut(s) 209, 220
PspGI CCWGG 5 cut(s) 189, 1219, 1267, 1350, 1630
PspOMI GGGCCC 1 cut(s) 801
PspPI GGNCC 8 cut(s) 352, 427, 655, 801, 802, 1272, 1343, 1741
PspPPI RGGWCCY 2 cut(s) 655, 1741
PstI CTGCAG 1 cut(s) 1417
PstNI CAGNNNCTG 1 cut(s) 1760
PsuI RGATCY 1 cut(s) 1456
PvuII CAGCTG 1 cut(s) 1178
RruI TCGCGA 1 cut(s) 325
RsaI GTAC 3 cut(s) 1190, 1264, 1506
RsaNI GTAC 3 cut(s) 1189, 1263, 1505
RseI CAYNNNNRTG 2 cut(s) 480, 1287
SacI GAGCTC 1 cut(s) 17
SapI GCTCTTC 2 cut(s) 41, 1246
SaqAI TTAA 2 cut(s) 336, 1490
Sau3AI GATC 7 cut(s) 200, 628, 775, 939, 1156, 1456, 1822
Sau96I GGNCC 8 cut(s) 352, 427, 655, 801, 802, 1272, 1343, 1741
SchI GAGTC 3 cut(s) 23, 1103, 1919
ScrFI CCNGG 6 cut(s) 191, 371, 1221, 1269, 1352, 1632
SduI GDGCHC 4 cut(s) 17, 805, 919, 1448
SexAI ACCWGGT 1 cut(s) 1219
SfaNI GCATC 5 cut(s) 974, 1371, 1465, 1719, 1807
SfcI CTRYAG 2 cut(s) 1413, 1892
SfuI TTCGAA 1 cut(s) 587
SinI GGWCC 5 cut(s) 352, 427, 655, 1343, 1741
SmiMI CAYNNNNRTG 2 cut(s) 480, 1287
SmlI CTYRAG 2 cut(s) 155, 503
SmoI CTYRAG 2 cut(s) 155, 503
Sse9I AATT 7 cut(s) 267, 468, 552, 611, 850, 1192, 1547
SsiI CCGC 5 cut(s) 602, 1077, 1306, 1424, 1883
SspMI CTAG 6 cut(s) 375, 1062, 1232, 1373, 1790, 1826
SstI GAGCTC 1 cut(s) 17
StyD4I CCNGG 6 cut(s) 189, 369, 1219, 1267, 1350, 1630
StyI CCWWGG 1 cut(s) 108
TaaI ACNGT 5 cut(s) 427, 463, 1113, 1279, 1756
TaiI ACGT 5 cut(s) 211, 222, 494, 712, 1362
TaqI TCGA 7 cut(s) 199, 411, 587, 1362, 1379, 1537, 1704
TasI AATT 7 cut(s) 267, 468, 552, 611, 850, 1192, 1547
TatI WGTACW 1 cut(s) 1188
TfiI GAWTC 5 cut(s) 1376, 1451, 1701, 1706, 1921
Tru1I TTAA 2 cut(s) 336, 1490
Tru9I TTAA 2 cut(s) 336, 1490
TscAI CASTG 2 cut(s) 961, 1282
TseFI GTSAC 3 cut(s) 209, 902, 1417
Tsp45I GTSAC 3 cut(s) 209, 902, 1417
TspGWI ACGGA 1 cut(s) 1330
TspRI CASTG 2 cut(s) 961, 1282
VpaK11BI GGWCC 5 cut(s) 352, 427, 655, 1343, 1741
XapI RAATTY 1 cut(s) 611
XceI RCATGY 2 cut(s) 479, 931
XcmI CCANNNNNNNNNTGG 1 cut(s) 14
XmnI GAANNNNTTC 2 cut(s) 1525, 1705
XspI CTAG 6 cut(s) 375, 1062, 1232, 1373, 1790, 1826
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.