Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000330.1

Orthogroup ID

OG0008753

Physical Location & Seq

Genomic Coordinates Reverse (-)

32611 .. 37526

Gene Structure 4916 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000330.1_g000005.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1929 bp

atgcttcagcagagctccctcttcgccaccgccgatttcgggttcaggccgtgtttggttctccccaataaaaccaaaaacccattcttctcttcctccatggacctcaaaccaacccacaccaagctcccaacttttactcctgcttcttcttcttctcgctcactaaaccaggccttggcttgccgggcgtcacgtgactctcacgtgacccctcctccgggtggagatggtttagctgctgttgttcatggattgtctgagaccattgtgggtgttcttggaggaggccagctgggtcggatgctgtgccaagcagcttcacaaatggctattaaggtgatggtattggacccacaggagagttgtccggcgagtcgacttgcctatcaccatatggttgggagctttgatgacagtgccactgtccaagaattcgcgaaaaggtgtggagtgttgacggtggaaatcgaacatgtggatgtggagacattggagaagcttgagcagcaaggagtagactgccagccgaaagcctctacaatcagaataatacaggacaaatatcttcagaaggttcacttttcgcggcatgatattccacttcctgaatttatgcagatagatgatctggaaggtgccaagagggcaggcaacctctttgactatcctctaatgataaagagtaaaagattagcttatgatgggcgtggaaatgctgttgctaagagtgagcatgatctttcttctgctgtaacagctcttggagggtttgatcgcggtttgtatgttgagaaatgggccccttttgtaaaggagctggccgtcattgttgctagaggaagagacaattctatcgtgtgctatcctgttgttgaaactatacacaaggaaaacatttgtcacattgtcaaagcacctgctaacgtgccatggaagatccgaaagttggccactgacattgcatctagagctattagttcattagaaggcgctggtgtttttgcagttgagttgttcttgacagaggatgatcagattttgctaaatgaagtagctcccagacctcacaatagcggtcatcacacaatagagtcttgctacacctcacagtatgaacagcatttgcgggctgttgttggtcttccacttggtgatccatcaatgaaaactcctgctgcaattatgtacaatttacttggtgaagatgagggggaagctggtttccacctagctcatcaagtgattggaagagccctgagtattccaggggctactgttcattggtatgataagccagatatgcggaagcaacggaaaatgggtcatattaccattgttggaccttccatgggcaatgtggaaaaagctctggattcaatgctaaatgacaaaatatctgatagtcagtccactgccacaccgcgtgttgggatcataatgggttctgattcagatcttcctgttatgaaggatgctgcaaaagttttgaatatgtttgaagtgcctcacgaggttaggatagtttctgcgcatcgaactcccgattggatgcattcttatgccttgtctgcccaggaaaggggaattcaggtcatcattgctggtgctggtggcgcagctcacttgccaggaatggtagctgcatccactccattacccgttattggtgtccctgtgcgtgcctctacattggatggagttgattcggttctatctatattgcagatgccaagaggggtcccggttgcaacagttgctataaacaatgccaccaatgctggtttgctagcagtaaggatgttagctgtttgtgatgctgatctacttgcaagaatcagccagtatcaagaagacacaaagagcgaagtcttggcaaaagatgagaagctacagaaagttggttgggaatcttatttgaatccttga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00230 ko01100 ko01110 map00230 map01100 map01110

Pfam Domains

Protein Families

AIRC ATP-grasp

Protein Analysis

642

Amino Acids

69.53

Weight (kDa)

6.29

Isoelectric Point (pI)

42.79

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008753)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G05140 AT2G37690
fragaria_vesca	FvH4_5g12790 FvH4_5g12790 FvH4_5g12790 FvH4_6g42830
malus_domestica	MD04G1227600.v1.1 MD12G1244300.v1.1
prunus_persica	Prupe.6G346800_v2.0.a1
pyrus_communis	pycom04g20110 pycom12g22400 pycom12g22410
rosa_chinensis	RchiOBHm_Chr3g0450361
rosa_laevigata	RLG00000025735
rosa_multiflora	Rmu_sc0000330.1_g000005
rosa_roxburghii	Rroxscaffold_6G00428090
rosa_rugosa	Rorug02G0627200 Rorug02G0627200
rosa_samantha	Rh3AG027600 Rh3BG028100 Rh3CG027000 Rh3DG028000
rosa_wichuraiana	Rw3G002150

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	928
Acc16I	TGCGCA	1 cut(s)	1533
Acc36I	ACCTGC	1 cut(s)	928
AccB1I	GGYRCC	1 cut(s)	638
AccB7I	CCANNNNNTGG	1 cut(s)	178
AccI	GTMKAC	2 cut(s)	379, 519
AccII	CGCG	4 cut(s)	440, 589, 780, 1426
AciI	CCGC	7 cut(s)	30, 589, 780, 1077, 1129, 1306, 1424
AclWI	GGATC	3 cut(s)	934, 1151, 1442
AcoI	YGGCCR	2 cut(s)	822, 951
AcsI	RAATTY	3 cut(s)	434, 611, 1587
AcuI	CTGAAG	1 cut(s)	554
AcvI	CACGTG	2 cut(s)	197, 208
AcyI	GRCGYC	1 cut(s)	191
AdeI	CACNNNGTG	2 cut(s)	1154, 1427
AfaI	GTAC	1 cut(s)	1190
AflIII	ACRYGT	1 cut(s)	475
AgsI	TTSAA	5 cut(s)	878, 1380, 1492, 1502, 1921
AjnI	CCWGG	4 cut(s)	171, 1267, 1575, 1630
AjuI	GAANNNNNNNTTGG	4 cut(s)	68, 100, 1531, 1563
Alw21I	GWGCWC	1 cut(s)	17
Alw26I	GTCTC	3 cut(s)	257, 482, 840
AlwI	GGATC	3 cut(s)	934, 1151, 1442
AoxI	GGCC	6 cut(s)	47, 174, 289, 801, 822, 951
ApaI	GGGCCC	1 cut(s)	805
ApeKI	GCWGC	7 cut(s)	239, 317, 508, 1178, 1478, 1619, 1643
ApoI	RAATTY	3 cut(s)	434, 611, 1587
AspLEI	GCGC	3 cut(s)	995, 1534, 1619
AspS9I	GGNCC	6 cut(s)	103, 352, 801, 802, 1343, 1741
AsuC2I	CCSGG	3 cut(s)	188, 222, 1745
AsuHPI	GGTGA	4 cut(s)	352, 383, 1166, 1214
AsuNHI	GCTAGC	1 cut(s)	1789
AvaII	GGWCC	4 cut(s)	103, 352, 1343, 1741
BaeGI	GKGCMC	1 cut(s)	805
BalI	TGGCCA	1 cut(s)	953
BanI	GGYRCC	1 cut(s)	638
BanII	GRGCYC	3 cut(s)	17, 805, 1258
BauI	CACGAG	1 cut(s)	1511
BbrPI	CACGTG	2 cut(s)	197, 208
BbsI	GAAGAC	2 cut(s)	1136, 1860
Bbv12I	GWGCWC	1 cut(s)	17
BbvI	GCAGC	7 cut(s)	226, 329, 520, 1165, 1465, 1630, 1631
BccI	CCATC	5 cut(s)	224, 337, 698, 1168, 1691
BceAI	ACGGC	2 cut(s)	34, 809
BciT130I	CCWGG	4 cut(s)	173, 1269, 1577, 1632
BclI	TGATCA	1 cut(s)	1033
BcnI	CCSGG	3 cut(s)	188, 222, 1745
BcoDI	GTCTC	3 cut(s)	257, 482, 840
BfaI	CTAG	4 cut(s)	837, 969, 1232, 1790
BfmI	CTRYAG	1 cut(s)	1892
BfoI	RGCGCY	1 cut(s)	996
BfuAI	ACCTGC	1 cut(s)	928
BglI	GCCNNNNNGGC	1 cut(s)	647
BglII	AGATCT	1 cut(s)	1456
BisI	GCNGC	8 cut(s)	240, 318, 509, 590, 1179, 1479, 1620, 1644
BlsI	GCNGC	8 cut(s)	241, 319, 510, 591, 1180, 1480, 1621, 1645
Bme1390I	CCNGG	7 cut(s)	173, 188, 222, 1269, 1577, 1632, 1745
Bme18I	GGWCC	4 cut(s)	103, 352, 1343, 1741
BmgT120I	GGNCC	6 cut(s)	103, 352, 801, 802, 1343, 1741
BmiI	GGNNCC	6 cut(s)	354, 640, 803, 804, 1742, 1743
BmrFI	CCNGG	7 cut(s)	173, 188, 222, 1269, 1577, 1632, 1745
BmsI	GCATC	8 cut(s)	294, 974, 1465, 1542, 1543, 1655, 1719, 1807
BmtI	GCTAGC	1 cut(s)	1793
BpiI	GAAGAC	2 cut(s)	1136, 1860
BpuEI	CTTGAG	1 cut(s)	524
BpuMI	CCSGG	3 cut(s)	188, 222, 1745
BsaAI	YACGTR	2 cut(s)	197, 208
BsaBI	GATNNNNATC	2 cut(s)	1455, 1821
BsaHI	GRCGYC	1 cut(s)	191
BsaI	GGTCTC	1 cut(s)	257
BsaJI	CCNNGG	6 cut(s)	99, 177, 932, 1268, 1350, 1575
BsaXI	ACNNNNNCTCC	4 cut(s)	124, 154, 202, 232
Bse1I	ACTGG	1 cut(s)	1843
Bse3DI	GCAATG	3 cut(s)	960, 1363, 1599
Bse8I	GATNNNNATC	2 cut(s)	1455, 1821
BseBI	CCWGG	4 cut(s)	173, 1269, 1577, 1632
BseDI	CCNNGG	6 cut(s)	99, 177, 932, 1268, 1350, 1575
BseGI	GGATG	8 cut(s)	309, 487, 1036, 1480, 1557, 1646, 1702, 1806
BseJI	GATNNNNATC	2 cut(s)	1455, 1821
BseMI	GCAATG	3 cut(s)	960, 1363, 1599
BseMII	CTCAG	2 cut(s)	252, 1250
BseNI	ACTGG	1 cut(s)	1843
BseRI	GAGGAG	2 cut(s)	207, 300
BseSI	GKGCMC	1 cut(s)	805
BseXI	GCAGC	7 cut(s)	226, 329, 520, 1165, 1465, 1630, 1631
BseYI	CCCAGC	1 cut(s)	295
Bsh1236I	CGCG	4 cut(s)	440, 589, 780, 1426
BshFI	GGCC	6 cut(s)	49, 176, 291, 803, 824, 953
BshNI	GGYRCC	1 cut(s)	638
BsiHKAI	GWGCWC	1 cut(s)	17
BsiSI	CCGG	4 cut(s)	187, 221, 371, 1745
BslFI	GGGAC	2 cut(s)	1658, 1727
BsmAI	GTCTC	3 cut(s)	257, 482, 840
BsmFI	GGGAC	2 cut(s)	1658, 1727
BsmI	GAATGC	1 cut(s)	1555
BsnI	GGCC	6 cut(s)	49, 176, 291, 803, 824, 953
Bso31I	GGTCTC	1 cut(s)	257
Bsp120I	GGGCCC	1 cut(s)	801
Bsp1286I	GDGCHC	3 cut(s)	17, 805, 1258
Bsp1407I	TGTACA	1 cut(s)	1188
Bsp143I	GATC	9 cut(s)	628, 739, 775, 939, 1033, 1156, 1434, 1456, 1822
Bsp19I	CCATGG	3 cut(s)	99, 932, 1350
Bsp68I	TCGCGA	1 cut(s)	440
BspACI	CCGC	7 cut(s)	30, 589, 780, 1077, 1129, 1306, 1424
BspANI	GGCC	6 cut(s)	49, 176, 291, 803, 824, 953
BspCNI	CTCAG	2 cut(s)	253, 1251
BspFNI	CGCG	4 cut(s)	440, 589, 780, 1426
BspLI	GGNNCC	6 cut(s)	354, 640, 803, 804, 1742, 1743
BspMI	ACCTGC	1 cut(s)	928
BspOI	GCTAGC	1 cut(s)	1793
BspPI	GGATC	3 cut(s)	934, 1151, 1442
BspQI	GCTCTTC	1 cut(s)	1246
BspT107I	GGYRCC	1 cut(s)	638
BspTNI	GGTCTC	1 cut(s)	257
BsrDI	GCAATG	3 cut(s)	960, 1363, 1599
BsrGI	TGTACA	1 cut(s)	1188
BsrI	ACTGG	1 cut(s)	1843
BssECI	CCNNGG	6 cut(s)	99, 177, 932, 1268, 1350, 1575
BssMI	GATC	9 cut(s)	628, 739, 775, 939, 1033, 1156, 1434, 1456, 1822
BssNI	GRCGYC	1 cut(s)	191
BssSI	CACGAG	1 cut(s)	1511
BssT1I	CCWWGG	4 cut(s)	99, 177, 932, 1350
Bst2BI	CACGAG	1 cut(s)	1511
Bst2UI	CCWGG	4 cut(s)	173, 1269, 1577, 1632
Bst4CI	ACNGT	6 cut(s)	419, 427, 463, 1113, 1279, 1756
Bst6I	CTCTTC	4 cut(s)	26, 97, 838, 1246
BstACI	GRCGYC	1 cut(s)	191
BstAPI	GCANNNNNTGC	1 cut(s)	1757
BstAUI	TGTACA	1 cut(s)	1188
BstBAI	YACGTR	2 cut(s)	197, 208
BstC8I	GCNNGC	8 cut(s)	184, 293, 527, 652, 822, 1131, 1683, 1791
BstDEI	CTNAG	3 cut(s)	261, 726, 1259
BstDSI	CCRYGG	3 cut(s)	99, 932, 1350
BstF5I	GGATG	8 cut(s)	309, 487, 1036, 1480, 1557, 1646, 1702, 1806
BstFNI	CGCG	4 cut(s)	440, 589, 780, 1426
BstH2I	RGCGCY	1 cut(s)	996
BstHHI	GCGC	3 cut(s)	995, 1534, 1619
BstKTI	GATC	9 cut(s)	631, 742, 778, 942, 1036, 1159, 1437, 1459, 1825
BstMAI	GTCTC	3 cut(s)	257, 482, 840
BstMBI	GATC	9 cut(s)	628, 739, 775, 939, 1033, 1156, 1434, 1456, 1822
BstNI	CCWGG	4 cut(s)	173, 1269, 1577, 1632
BstNSI	RCATGY	1 cut(s)	479
BstSCI	CCNGG	7 cut(s)	171, 186, 220, 1267, 1575, 1630, 1743
BstSFI	CTRYAG	1 cut(s)	1892
BstSLI	GKGCMC	1 cut(s)	805
BstUI	CGCG	4 cut(s)	440, 589, 780, 1426
BstV1I	GCAGC	7 cut(s)	226, 329, 520, 1165, 1465, 1630, 1631
BstV2I	GAAGAC	2 cut(s)	1136, 1860
BstX2I	RGATCY	2 cut(s)	939, 1456
BstXI	CCANNNNNNTGG	1 cut(s)	401
BstYI	RGATCY	2 cut(s)	939, 1456
BsuRI	GGCC	6 cut(s)	49, 176, 291, 803, 824, 953
BtgI	CCRYGG	3 cut(s)	99, 932, 1350
BtsCI	GGATG	8 cut(s)	309, 487, 1036, 1480, 1557, 1646, 1702, 1806
BtsI	GCAGTG	1 cut(s)	1413
BtsIMutI	CAGTG	4 cut(s)	423, 424, 954, 1413
BtuMI	TCGCGA	1 cut(s)	440
BveI	ACCTGC	1 cut(s)	928
Cac8I	GCNNGC	8 cut(s)	184, 293, 527, 652, 822, 1131, 1683, 1791
CfoI	GCGC	3 cut(s)	995, 1534, 1619
Cfr13I	GGNCC	6 cut(s)	103, 352, 801, 802, 1343, 1741
CseI	GACGC	1 cut(s)	180
Csp6I	GTAC	1 cut(s)	1189
CspCI	CAANNNNNGTGG	2 cut(s)	943, 978
CviAII	CATG	7 cut(s)	100, 251, 476, 593, 737, 933, 1351
CviQI	GTAC	1 cut(s)	1189
DdeI	CTNAG	3 cut(s)	261, 726, 1259
DpnI	GATC	9 cut(s)	630, 741, 777, 941, 1035, 1158, 1436, 1458, 1824
DpnII	GATC	9 cut(s)	628, 739, 775, 939, 1033, 1156, 1434, 1456, 1822
DraIII	CACNNNGTG	2 cut(s)	1154, 1427
EaeI	YGGCCR	2 cut(s)	822, 951
Eam1104I	CTCTTC	4 cut(s)	26, 97, 838, 1246
EarI	CTCTTC	4 cut(s)	26, 97, 838, 1246
Ecl136II	GAGCTC	1 cut(s)	15
Eco130I	CCWWGG	4 cut(s)	99, 177, 932, 1350
Eco147I	AGGCCT	1 cut(s)	176
Eco24I	GRGCYC	3 cut(s)	17, 805, 1258
Eco31I	GGTCTC	1 cut(s)	257
Eco47I	GGWCC	4 cut(s)	103, 352, 1343, 1741
Eco53kI	GAGCTC	1 cut(s)	15
Eco57I	CTGAAG	1 cut(s)	554
Eco72I	CACGTG	2 cut(s)	197, 208
EcoICRI	GAGCTC	1 cut(s)	15
EcoO109I	RGGNCCY	2 cut(s)	802, 1741
EcoRI	GAATTC	2 cut(s)	434, 1587
EcoRII	CCWGG	4 cut(s)	171, 1267, 1575, 1630
EcoT14I	CCWWGG	4 cut(s)	99, 177, 932, 1350
EcoT22I	ATGCAT	1 cut(s)	1557
EcoT38I	GRGCYC	3 cut(s)	17, 805, 1258
ErhI	CCWWGG	4 cut(s)	99, 177, 932, 1350
FaeI	CATG	7 cut(s)	103, 254, 479, 596, 740, 936, 1354
FalI	AAGNNNNNCTT	4 cut(s)	566, 598, 682, 714
FaqI	GGGAC	2 cut(s)	1658, 1727
FatI	CATG	7 cut(s)	99, 250, 475, 592, 736, 932, 1350
FauI	CCCGC	1 cut(s)	1122
FauNDI	CATATG	1 cut(s)	396
FbaI	TGATCA	1 cut(s)	1033
FblI	GTMKAC	2 cut(s)	379, 519
Fnu4HI	GCNGC	8 cut(s)	240, 318, 509, 590, 1179, 1479, 1620, 1644
FokI	GGATG	8 cut(s)	316, 494, 1043, 1487, 1564, 1633, 1709, 1813
FriOI	GRGCYC	3 cut(s)	17, 805, 1258
Fsp4HI	GCNGC	8 cut(s)	240, 318, 509, 590, 1179, 1479, 1620, 1644
FspBI	CTAG	4 cut(s)	837, 969, 1232, 1790
FspI	TGCGCA	1 cut(s)	1533
GlaI	GCGC	3 cut(s)	994, 1533, 1618
GluI	GCNGC	8 cut(s)	240, 318, 509, 590, 1179, 1479, 1620, 1644
GsaI	CCCAGC	1 cut(s)	299
HaeII	RGCGCY	1 cut(s)	996
HaeIII	GGCC	6 cut(s)	49, 176, 291, 803, 824, 953
HapII	CCGG	4 cut(s)	187, 221, 371, 1745
HgaI	GACGC	1 cut(s)	180
HhaI	GCGC	3 cut(s)	995, 1534, 1619
Hin1I	GRCGYC	1 cut(s)	191
Hin1II	CATG	7 cut(s)	103, 254, 479, 596, 740, 936, 1354
Hin6I	GCGC	3 cut(s)	993, 1532, 1617
HinP1I	GCGC	3 cut(s)	993, 1532, 1617
HincII	GTYRAC	2 cut(s)	380, 459
HindII	GTYRAC	2 cut(s)	380, 459
HindIII	AAGCTT	1 cut(s)	500
HinfI	GANTC	9 cut(s)	200, 376, 1094, 1376, 1451, 1706, 1836, 1910, 1921
HpaII	CCGG	4 cut(s)	187, 221, 371, 1745
HphI	GGTGA	4 cut(s)	352, 383, 1166, 1214
Hpy166II	GTNNAC	5 cut(s)	380, 459, 520, 580, 1413
Hpy188I	TCNGA	9 cut(s)	262, 303, 548, 573, 944, 1038, 1402, 1450, 1456
Hpy188III	TCNNGA	9 cut(s)	439, 608, 632, 969, 1021, 1373, 1511, 1544, 1850
Hpy8I	GTNNAC	5 cut(s)	380, 459, 520, 580, 1413
HpyAV	CCTTC	5 cut(s)	568, 629, 983, 1356, 1465
HpyCH4III	ACNGT	6 cut(s)	419, 427, 463, 1113, 1279, 1756
HpyCH4IV	ACGT	3 cut(s)	196, 207, 927
HpyF3I	CTNAG	3 cut(s)	261, 726, 1259
HpySE526I	ACGT	3 cut(s)	196, 207, 927
Hsp92I	GRCGYC	1 cut(s)	191
Hsp92II	CATG	7 cut(s)	103, 254, 479, 596, 740, 936, 1354
HspAI	GCGC	3 cut(s)	993, 1532, 1617
KflI	GGGWCCC	1 cut(s)	1741
Ksp22I	TGATCA	1 cut(s)	1033
Kzo9I	GATC	9 cut(s)	628, 739, 775, 939, 1033, 1156, 1434, 1456, 1822
LguI	GCTCTTC	1 cut(s)	1246
LmnI	GCTCC	5 cut(s)	20, 132, 405, 817, 1063
Lsp1109I	GCAGC	7 cut(s)	226, 329, 520, 1165, 1465, 1630, 1631
LweI	GCATC	8 cut(s)	294, 974, 1465, 1542, 1543, 1655, 1719, 1807
MaeI	CTAG	4 cut(s)	837, 969, 1232, 1790
MaeII	ACGT	3 cut(s)	196, 207, 927
MaeIII	GTNAC	5 cut(s)	192, 197, 208, 754, 902
MalI	GATC	9 cut(s)	630, 741, 777, 941, 1035, 1158, 1436, 1458, 1824
MboI	GATC	9 cut(s)	628, 739, 775, 939, 1033, 1156, 1434, 1456, 1822
MflI	RGATCY	2 cut(s)	939, 1456
MhlI	GDGCHC	3 cut(s)	17, 805, 1258
MlsI	TGGCCA	1 cut(s)	953
MluCI	AATT	6 cut(s)	434, 611, 850, 1182, 1192, 1587
MluNI	TGGCCA	1 cut(s)	953
MlyI	GAGTC	3 cut(s)	194, 385, 1103
MmeI	TCCRAC	2 cut(s)	281, 1321
Mox20I	TGGCCA	1 cut(s)	953
Mph1103I	ATGCAT	1 cut(s)	1557
MscI	TGGCCA	1 cut(s)	953
MseI	TTAA	1 cut(s)	336
MslI	CAYNNNNRTG	3 cut(s)	480, 1287, 1560
Msp20I	TGGCCA	1 cut(s)	953
MspA1I	CMGCKG	1 cut(s)	295
MspI	CCGG	4 cut(s)	187, 221, 371, 1745
MspR9I	CCNGG	7 cut(s)	173, 188, 222, 1269, 1577, 1632, 1745
Mva1269I	GAATGC	1 cut(s)	1555
MvaI	CCWGG	4 cut(s)	173, 1269, 1577, 1632
MvnI	CGCG	4 cut(s)	440, 589, 780, 1426
NciI	CCSGG	3 cut(s)	188, 222, 1745
NcoI	CCATGG	3 cut(s)	99, 932, 1350
NdeI	CATATG	1 cut(s)	396
NdeII	GATC	9 cut(s)	628, 739, 775, 939, 1033, 1156, 1434, 1456, 1822
NheI	GCTAGC	1 cut(s)	1789
NlaIII	CATG	7 cut(s)	103, 254, 479, 596, 740, 936, 1354
NlaIV	GGNNCC	6 cut(s)	354, 640, 803, 804, 1742, 1743
NmuCI	GTSAC	4 cut(s)	192, 197, 208, 902
NruI	TCGCGA	1 cut(s)	440
NsbI	TGCGCA	1 cut(s)	1533
NsiI	ATGCAT	1 cut(s)	1557
NspI	RCATGY	1 cut(s)	479
PaqCI	CACCTGC	1 cut(s)	928
PceI	AGGCCT	1 cut(s)	176
PciI	ACATGT	1 cut(s)	475
PciSI	GCTCTTC	1 cut(s)	1246
PcsI	WCGNNNNNNNCGW	1 cut(s)	30
PctI	GAATGC	1 cut(s)	1555
PfeI	GAWTC	6 cut(s)	1376, 1451, 1706, 1836, 1910, 1921
PflMI	CCANNNNNTGG	1 cut(s)	178
PkrI	GCNGC	8 cut(s)	241, 319, 510, 591, 1180, 1480, 1621, 1645
PleI	GAGTC	3 cut(s)	194, 384, 1102
PmaCI	CACGTG	2 cut(s)	197, 208
PmlI	CACGTG	2 cut(s)	197, 208
PpsI	GAGTC	3 cut(s)	194, 384, 1102
Ppu21I	YACGTR	2 cut(s)	197, 208
PpuMI	RGGWCCY	1 cut(s)	1741
PscI	ACATGT	1 cut(s)	475
Psp124BI	GAGCTC	1 cut(s)	17
Psp5II	RGGWCCY	1 cut(s)	1741
Psp6I	CCWGG	4 cut(s)	171, 1267, 1575, 1630
PspCI	CACGTG	2 cut(s)	197, 208
PspFI	CCCAGC	1 cut(s)	295
PspGI	CCWGG	4 cut(s)	171, 1267, 1575, 1630
PspN4I	GGNNCC	6 cut(s)	354, 640, 803, 804, 1742, 1743
PspOMI	GGGCCC	1 cut(s)	801
PspPI	GGNCC	6 cut(s)	103, 352, 801, 802, 1343, 1741
PspPPI	RGGWCCY	1 cut(s)	1741
PsuI	RGATCY	2 cut(s)	939, 1456
PvuII	CAGCTG	1 cut(s)	295
RruI	TCGCGA	1 cut(s)	440
RsaI	GTAC	1 cut(s)	1190
RsaNI	GTAC	1 cut(s)	1189
RseI	CAYNNNNRTG	3 cut(s)	480, 1287, 1560
SacI	GAGCTC	1 cut(s)	17
SalI	GTCGAC	1 cut(s)	378
SapI	GCTCTTC	1 cut(s)	1246
SaqAI	TTAA	1 cut(s)	336
SatI	GCNGC	8 cut(s)	240, 318, 509, 590, 1179, 1479, 1620, 1644
Sau3AI	GATC	9 cut(s)	628, 739, 775, 939, 1033, 1156, 1434, 1456, 1822
Sau96I	GGNCC	6 cut(s)	103, 352, 801, 802, 1343, 1741
SchI	GAGTC	3 cut(s)	194, 385, 1103
ScrFI	CCNGG	7 cut(s)	173, 188, 222, 1269, 1577, 1632, 1745
SduI	GDGCHC	3 cut(s)	17, 805, 1258
SfaNI	GCATC	8 cut(s)	294, 974, 1465, 1542, 1543, 1655, 1719, 1807
SfcI	CTRYAG	1 cut(s)	1892
SinI	GGWCC	4 cut(s)	103, 352, 1343, 1741
SmiMI	CAYNNNNRTG	3 cut(s)	480, 1287, 1560
SmlI	CTYRAG	1 cut(s)	503
SmoI	CTYRAG	1 cut(s)	503
Sse9I	AATT	6 cut(s)	434, 611, 850, 1182, 1192, 1587
SseBI	AGGCCT	1 cut(s)	176
SsiI	CCGC	7 cut(s)	30, 589, 780, 1077, 1129, 1306, 1424
SspMI	CTAG	4 cut(s)	837, 969, 1232, 1790
SstI	GAGCTC	1 cut(s)	17
StuI	AGGCCT	1 cut(s)	176
StyD4I	CCNGG	7 cut(s)	171, 186, 220, 1267, 1575, 1630, 1743
StyI	CCWWGG	4 cut(s)	99, 177, 932, 1350
TaaI	ACNGT	6 cut(s)	419, 427, 463, 1113, 1279, 1756
TaiI	ACGT	3 cut(s)	199, 210, 930
TaqI	TCGA	3 cut(s)	379, 471, 1537
TasI	AATT	6 cut(s)	434, 611, 850, 1182, 1192, 1587
TatI	WGTACW	1 cut(s)	1188
TauI	GCSGC	1 cut(s)	592
TfiI	GAWTC	6 cut(s)	1376, 1451, 1706, 1836, 1910, 1921
Tru1I	TTAA	1 cut(s)	336
Tru9I	TTAA	1 cut(s)	336
TscAI	CASTG	4 cut(s)	424, 430, 961, 1420
TseFI	GTSAC	4 cut(s)	192, 197, 208, 902
TseI	GCWGC	7 cut(s)	239, 317, 508, 1178, 1478, 1619, 1643
Tsp45I	GTSAC	4 cut(s)	192, 197, 208, 902
TspDTI	ATGAA	7 cut(s)	239, 972, 1065, 1131, 1181, 1271, 1484
TspGWI	ACGGA	1 cut(s)	1330
TspRI	CASTG	4 cut(s)	424, 430, 961, 1420
Van91I	CCANNNNNTGG	1 cut(s)	178
VpaK11BI	GGWCC	4 cut(s)	103, 352, 1343, 1741
XapI	RAATTY	3 cut(s)	434, 611, 1587
XbaI	TCTAGA	1 cut(s)	968
XceI	RCATGY	1 cut(s)	479
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1357
XmiI	GTMKAC	2 cut(s)	379, 519
XspI	CTAG	4 cut(s)	837, 969, 1232, 1790
Zsp2I	ATGCAT	1 cut(s)	1557

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.