MD04G1227600.v1.1

Phosphoribosylaminoimidazole carboxylase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr04
OG0008753
Physical Location & Seq
Forward (+)
30705494 .. 30710091
4598 bp
Loading structure...
UTR
Exon/CDS
Intron
MD04G1227600.v1.1.491

Sequence Viewer

Length: 1923 bp
ATGTTCCAACAGAGCTCTGGCTGCTGCGACTCGCTCTTCGCTTCGCAGGAGTTTGGGTTTAGGCCGTGTTTGGCTGCGCCGAAAAACGCATTCTCCTGCTCCATGGAAAAGCAGAAGCTTTTCACTGGTTCTTCTTCTTCTCTCTCGCTCAAGGAGCAACCCCAAACGAAGCGTAATCCAATCCTGGCCTGCCGAGCGTCACGTGACCCTCACGTGATTACTGGGAAAGATGATGCAGCTGTTCATGGAGTTGCTGATGTAATTGTTGGTGTTCTTGGAGGAGGCCAACTGGGTCGGATGTTCTGCCAAGCAGCTTCGCGAATGGCGATTAAAGTGATGGTCTTGGACCCACAAGAGAACTGCCCAGCTAGTGAGCTTGCCCATTATCATATGGTTGGCAGCTTCGATGATAGCGCGACGGTCCAAGAGTTCGCAAAGAGATGTGGAGTGCTGACTGTGGAAATTGAGCATGTGGATGTGGAGACGTTAGAGAAGCTTGAGCAGCAAGGAGTGGACTGCCAACCCAAAGCCTCTACAATCAGAATAATTCAGGATAAGTATCTCCAAAAGGTTCATTTTTCGAAGCATGATATTCCGCTTCCTGAATTCATGCAGATAGATGATCTTGAAGGTGCCAAGAGAGCAGGGGACCTCTTTGGCTATCCTCTTATGATTAAAAGTAAAAGGTTAGCTTACGATGGACGTGGAAATGCTGTTGCCAAGAGTGAGGATGAGCTTTCTTCTGCTGTGGCTGCTCTTGGGGGGTTTGATCGTGGCTTATATGTTGAGAAATGGGCCCCATTTGTAAAGGAGCTGGCTGTTATTGTCGCAAGAGGAAGAGACAATTCTATCGTGTGCTACCCTGTTGTTGAAACAATACACAAGGAAAACATTTGTCACATTGTAAAGGCACCTGCTAACATGTCTTGGAAGATCAGAAAGCTGGCCACTGATATTGCATCCAGAGCTGTTCGTTCATTAGAAGGTGCTGGTGTCTTTGCAGTTGAGTTGTTCTTGACAAAGGATGACCAGATTTTGCTAAATGAAGTAGCTCCTAGACCTCACAATAGCGGTCATCACACAATAGAGTCTTGCTACACTTCTCAATATGAACAACATTTGAGGGCTGTTGTTGGTCTTCCACTTGGTGATCCATCAATGAAAACTCCAGCTGCGATTATGTACAATTTACTTGGCGAAGATGAGGGGGAACCAGGTTTCCTTCTAGCTCAGCAATTGATTGGAAGAGCGTTGTGTATTCCAGGGGCCACTGTTCATTGGTATGATAAGCCAGAAATGCGGAAGCAACGGAAGATGGGTCATATCACCATTGTTGGACCTTCCCTGGGAAATGTCGAAAAACTTCTAGAGTTGATGCTAAATGAAGAAAAATCAGATAGTAAGTCTGCAGTCACACCGCGTGTTGGTATCGTAATGGGCTCTGATTCAGATCTTCCTGTTATGAAAGATGCTGCAAAGATTTTGAATATGTTTGGAGTACCTAATGAGGTGAGAATAGTTTCAGCACATCGAACTCCTGAATTGATGTATTCTTATGCCTTGTCTGCTCGGGAGAGAGGCATTCAGGTCATCATTGCTGGTGCTGGTGGTGCTGCTCACTTGCCAGGCATGGTAGCTGCCATCACTCCTTTGCCCGTTATTGGTGTCCCTGTGCGTGCTTCTACATTGGATGGAATCGATTCTCTTCTATCCATTGTGCAGATGCCGAGAGGGGTCCCAGTTGCAACAGTAGCTGTAAACAACGCCACCAACGCTGGTTTGCTCGCAGTCAGGATATTGGGTGTTTGTGATGCCGATCTAGTATCAAGAATGACCCAGTATCAAGAAGACACAAGGGACGAAGTTTTGACAAAGGCGGAGAAACTACAGAAAGATGGATGGGAGTCGTATTTGAATCCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00230 ko01100 ko01110 map00230 map01100 map01110
Pfam Domains
Protein Families
AIRC ATP-grasp

Protein Analysis

641

Amino Acids

69.59

Weight (kDa)

6.21

Isoelectric Point (pI)

40.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RS_preATP-grasp-like PF22660 89 - 184 8e-32 Ribonucleotide synthetase preATP-grasp domain
CPSase_L_D2 PF02786 185 - 356 2.9e-07 Carbamoyl-phosphate synthase L chain, ATP binding domain
ATP-grasp PF02222 192 - 370 6.6e-64 ATP-grasp domain
Dala_Dala_lig_C PF07478 214 - 354 2.1e-09 D-ala D-ala ligase C-terminus
PurK_C PF17769 392 - 453 2.1e-17 Phosphoribosylaminoimidazole carboxylase C-terminal domain
AIRC PF00731 474 - 620 1e-64 AIR carboxylase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 922
Acc36I ACCTGC 1 cut(s) 922
AccB1I GGYRCC 2 cut(s) 632, 910
AccII CGCG 3 cut(s) 319, 416, 1420
AciI CCGC 5 cut(s) 596, 1071, 1300, 1418, 1877
AclWI GGATC 1 cut(s) 1145
AcoI YGGCCR 1 cut(s) 945
AcsI RAATTY 1 cut(s) 605
AcvI CACGTG 2 cut(s) 203, 214
AdeI CACNNNGTG 2 cut(s) 1148, 1421
AfaI GTAC 2 cut(s) 1184, 1500
AfiI CCNNNNNNNGG 3 cut(s) 1346, 1424, 1661
AflIII ACRYGT 1 cut(s) 921
AgsI TTSAA 4 cut(s) 629, 872, 1486, 1915
AjiI CACGTC 1 cut(s) 704
AjnI CCWGG 5 cut(s) 183, 1213, 1261, 1344, 1624
AloI GAACNNNNNNTCC 2 cut(s) 1203, 1235
Alw21I GWGCWC 1 cut(s) 17
Alw26I GTCTC 2 cut(s) 476, 834
AlwI GGATC 1 cut(s) 1145
AlwNI CAGNNNCTG 1 cut(s) 1754
Ama87I CYCGRG 1 cut(s) 1569
AoxI GGCC 6 cut(s) 62, 186, 283, 795, 945, 1266
ApaI GGGCCC 1 cut(s) 799
ApoI RAATTY 1 cut(s) 605
ArsI GACNNNNNNTTYG 2 cut(s) 20, 52
Asp700I GAANNNNTTC 4 cut(s) 119, 1362, 1519, 1699
AspLEI GCGC 2 cut(s) 79, 416
AspS9I GGNCC 8 cut(s) 346, 421, 649, 795, 796, 1266, 1337, 1735
AsuHPI GGTGA 3 cut(s) 1160, 1318, 1522
AsuII TTCGAA 1 cut(s) 581
AvaI CYCGRG 1 cut(s) 1569
AvaII GGWCC 5 cut(s) 346, 421, 649, 1337, 1735
BaeGI GKGCMC 1 cut(s) 799
BalI TGGCCA 1 cut(s) 947
BanI GGYRCC 2 cut(s) 632, 910
BanII GRGCYC 3 cut(s) 17, 799, 1442
BbrPI CACGTG 2 cut(s) 203, 214
BbsI GAAGAC 2 cut(s) 1130, 1854
Bbv12I GWGCWC 1 cut(s) 17
BccI CCATC 8 cut(s) 331, 692, 1162, 1309, 1649, 1685, 1889, 1893
BceAI ACGGC 1 cut(s) 49
BciT130I CCWGG 5 cut(s) 185, 1215, 1263, 1346, 1626
BcoDI GTCTC 2 cut(s) 476, 834
BfaI CTAG 5 cut(s) 369, 1056, 1226, 1367, 1820
BfmI CTRYAG 2 cut(s) 1407, 1886
BfuAI ACCTGC 1 cut(s) 922
BglII AGATCT 1 cut(s) 1450
BlpI GCTNAGC 1 cut(s) 1230
Bme1390I CCNGG 5 cut(s) 185, 1215, 1263, 1346, 1626
Bme18I GGWCC 5 cut(s) 346, 421, 649, 1337, 1735
BmeT110I CYCGRG 1 cut(s) 1569
BmgBI CACGTC 1 cut(s) 704
BmgT120I GGNCC 8 cut(s) 346, 421, 649, 795, 796, 1266, 1337, 1735
BmrFI CCNGG 5 cut(s) 185, 1215, 1263, 1346, 1626
BmrI ACTGGG 4 cut(s) 231, 299, 1733, 1831
BmsI GCATC 6 cut(s) 223, 968, 1365, 1459, 1713, 1801
BmuI ACTGGG 4 cut(s) 231, 299, 1733, 1831
BpiI GAAGAC 2 cut(s) 1130, 1854
BpmI CTGGAG 1 cut(s) 1152
Bpu1102I GCTNAGC 1 cut(s) 1230
Bpu14I TTCGAA 1 cut(s) 581
BpuEI CTTGAG 2 cut(s) 134, 518
Bsa29I ATCGAT 1 cut(s) 1698
BsaAI YACGTR 2 cut(s) 203, 214
BsaBI GATNNNNATC 3 cut(s) 558, 1449, 1815
BsaJI CCNNGG 4 cut(s) 102, 1262, 1344, 1345
BsaXI ACNNNNNCTCC 4 cut(s) 41, 71, 77, 107
Bsc4I CCNNNNNNNGG 3 cut(s) 1346, 1424, 1661
Bse1I ACTGG 5 cut(s) 130, 226, 294, 1739, 1837
Bse3DI GCAATG 1 cut(s) 1593
Bse8I GATNNNNATC 3 cut(s) 558, 1449, 1815
BseBI CCWGG 5 cut(s) 185, 1215, 1263, 1346, 1626
BseCI ATCGAT 1 cut(s) 1698
BseDI CCNNGG 4 cut(s) 102, 1262, 1344, 1345
BseGI GGATG 7 cut(s) 303, 481, 736, 959, 1030, 1696, 1904
BseJI GATNNNNATC 3 cut(s) 558, 1449, 1815
BseLI CCNNNNNNNGG 3 cut(s) 1346, 1424, 1661
BseMI GCAATG 1 cut(s) 1593
BseMII CTCAG 1 cut(s) 1244
BseNI ACTGG 5 cut(s) 130, 226, 294, 1739, 1837
BseRI GAGGAG 1 cut(s) 294
BseSI GKGCMC 1 cut(s) 799
BseYI CCCAGC 1 cut(s) 364
BsgI GTGCAG 1 cut(s) 1739
Bsh1236I CGCG 3 cut(s) 319, 416, 1420
BshFI GGCC 6 cut(s) 64, 188, 285, 797, 947, 1268
BshNI GGYRCC 2 cut(s) 632, 910
BshVI ATCGAT 1 cut(s) 1698
BsiHKAI GWGCWC 1 cut(s) 17
BsiHKCI CYCGRG 1 cut(s) 1569
BslFI GGGAC 4 cut(s) 662, 1652, 1721, 1871
BslI CCNNNNNNNGG 3 cut(s) 1346, 1424, 1661
BsmAI GTCTC 2 cut(s) 476, 834
BsmBI CGTCTC 1 cut(s) 476
BsmFI GGGAC 4 cut(s) 662, 1652, 1721, 1871
BsmI GAATGC 2 cut(s) 89, 1581
BsnI GGCC 6 cut(s) 64, 188, 285, 797, 947, 1268
BsoBI CYCGRG 1 cut(s) 1569
Bsp119I TTCGAA 1 cut(s) 581
Bsp120I GGGCCC 1 cut(s) 795
Bsp1286I GDGCHC 3 cut(s) 17, 799, 1442
Bsp1407I TGTACA 1 cut(s) 1182
Bsp143I GATC 6 cut(s) 622, 769, 933, 1150, 1450, 1816
Bsp1720I GCTNAGC 1 cut(s) 1230
Bsp19I CCATGG 1 cut(s) 102
Bsp68I TCGCGA 1 cut(s) 319
BspACI CCGC 5 cut(s) 596, 1071, 1300, 1418, 1877
BspANI GGCC 6 cut(s) 64, 188, 285, 797, 947, 1268
BspCNI CTCAG 1 cut(s) 1243
BspDI ATCGAT 1 cut(s) 1698
BspFNI CGCG 3 cut(s) 319, 416, 1420
BspMAI CTGCAG 1 cut(s) 1411
BspMI ACCTGC 1 cut(s) 922
BspPI GGATC 1 cut(s) 1145
BspQI GCTCTTC 2 cut(s) 41, 1240
BspT104I TTCGAA 1 cut(s) 581
BspT107I GGYRCC 2 cut(s) 632, 910
BsrDI GCAATG 1 cut(s) 1593
BsrGI TGTACA 1 cut(s) 1182
BsrI ACTGG 5 cut(s) 130, 226, 294, 1739, 1837
BssECI CCNNGG 4 cut(s) 102, 1262, 1344, 1345
BssMI GATC 6 cut(s) 622, 769, 933, 1150, 1450, 1816
BssT1I CCWWGG 1 cut(s) 102
Bst2UI CCWGG 5 cut(s) 185, 1215, 1263, 1346, 1626
Bst4CI ACNGT 4 cut(s) 421, 457, 1273, 1750
Bst6I CTCTTC 4 cut(s) 41, 832, 1240, 1710
BstAUI TGTACA 1 cut(s) 1182
BstBAI YACGTR 2 cut(s) 203, 214
BstBI TTCGAA 1 cut(s) 581
BstC8I GCNNGC 6 cut(s) 190, 378, 816, 945, 1677, 1785
BstDEI CTNAG 1 cut(s) 1230
BstDSI CCRYGG 1 cut(s) 102
BstF5I GGATG 7 cut(s) 303, 481, 736, 959, 1030, 1696, 1904
BstFNI CGCG 3 cut(s) 319, 416, 1420
BstHHI GCGC 2 cut(s) 79, 416
BstKTI GATC 6 cut(s) 625, 772, 936, 1153, 1453, 1819
BstMAI GTCTC 2 cut(s) 476, 834
BstMBI GATC 6 cut(s) 622, 769, 933, 1150, 1450, 1816
BstNI CCWGG 5 cut(s) 185, 1215, 1263, 1346, 1626
BstNSI RCATGY 2 cut(s) 473, 925
BstSCI CCNGG 5 cut(s) 183, 1213, 1261, 1344, 1624
BstSFI CTRYAG 2 cut(s) 1407, 1886
BstSLI GKGCMC 1 cut(s) 799
BstUI CGCG 3 cut(s) 319, 416, 1420
BstV2I GAAGAC 2 cut(s) 1130, 1854
BstX2I RGATCY 1 cut(s) 1450
BstYI RGATCY 1 cut(s) 1450
Bsu15I ATCGAT 1 cut(s) 1698
BsuRI GGCC 6 cut(s) 64, 188, 285, 797, 947, 1268
BsuTUI ATCGAT 1 cut(s) 1698
BtgI CCRYGG 1 cut(s) 102
BtrI CACGTC 1 cut(s) 704
BtsCI GGATG 7 cut(s) 303, 481, 736, 959, 1030, 1696, 1904
BtsIMutI CAGTG 3 cut(s) 123, 948, 1269
BtuMI TCGCGA 1 cut(s) 319
BveI ACCTGC 1 cut(s) 922
Cac8I GCNNGC 6 cut(s) 190, 378, 816, 945, 1677, 1785
CaiI CAGNNNCTG 1 cut(s) 1754
CfoI GCGC 2 cut(s) 79, 416
Cfr13I GGNCC 8 cut(s) 346, 421, 649, 795, 796, 1266, 1337, 1735
ClaI ATCGAT 1 cut(s) 1698
CseI GACGC 1 cut(s) 186
CsiI ACCWGGT 1 cut(s) 1213
Csp6I GTAC 2 cut(s) 1183, 1499
CspCI CAANNNNNGTGG 2 cut(s) 937, 972
CviAII CATG 7 cut(s) 103, 245, 470, 587, 610, 922, 1630
CviQI GTAC 2 cut(s) 1183, 1499
DdeI CTNAG 1 cut(s) 1230
DpnI GATC 6 cut(s) 624, 771, 935, 1152, 1452, 1818
DpnII GATC 6 cut(s) 622, 769, 933, 1150, 1450, 1816
DraIII CACNNNGTG 2 cut(s) 1148, 1421
EaeI YGGCCR 1 cut(s) 945
Eam1104I CTCTTC 4 cut(s) 41, 832, 1240, 1710
EarI CTCTTC 4 cut(s) 41, 832, 1240, 1710
EciI GGCGGA 1 cut(s) 1892
Ecl136II GAGCTC 1 cut(s) 15
Eco130I CCWWGG 1 cut(s) 102
Eco24I GRGCYC 3 cut(s) 17, 799, 1442
Eco47I GGWCC 5 cut(s) 346, 421, 649, 1337, 1735
Eco53kI GAGCTC 1 cut(s) 15
Eco72I CACGTG 2 cut(s) 203, 214
Eco88I CYCGRG 1 cut(s) 1569
EcoICRI GAGCTC 1 cut(s) 15
EcoO109I RGGNCCY 3 cut(s) 649, 796, 1735
EcoRI GAATTC 1 cut(s) 605
EcoRII CCWGG 5 cut(s) 183, 1213, 1261, 1344, 1624
EcoT14I CCWWGG 1 cut(s) 102
EcoT38I GRGCYC 3 cut(s) 17, 799, 1442
ErhI CCWWGG 1 cut(s) 102
Esp3I CGTCTC 1 cut(s) 476
FaeI CATG 7 cut(s) 106, 248, 473, 590, 613, 925, 1633
FalI AAGNNNNNCTT 2 cut(s) 676, 708
FaqI GGGAC 4 cut(s) 662, 1652, 1721, 1871
FatI CATG 7 cut(s) 102, 244, 469, 586, 609, 921, 1629
FauNDI CATATG 1 cut(s) 390
FokI GGATG 7 cut(s) 310, 488, 743, 946, 1037, 1703, 1911
FriOI GRGCYC 3 cut(s) 17, 799, 1442
FspBI CTAG 5 cut(s) 369, 1056, 1226, 1367, 1820
GlaI GCGC 2 cut(s) 78, 415
GsaI CCCAGC 1 cut(s) 368
GsuI CTGGAG 1 cut(s) 1152
HaeIII GGCC 6 cut(s) 64, 188, 285, 797, 947, 1268
HgaI GACGC 1 cut(s) 186
HhaI GCGC 2 cut(s) 79, 416
Hin1II CATG 7 cut(s) 106, 248, 473, 590, 613, 925, 1633
Hin6I GCGC 2 cut(s) 77, 414
HinP1I GCGC 2 cut(s) 77, 414
HindIII AAGCTT 2 cut(s) 116, 494
HinfI GANTC 7 cut(s) 29, 1088, 1445, 1695, 1700, 1904, 1915
HphI GGTGA 3 cut(s) 1160, 1318, 1522
Hpy166II GTNNAC 2 cut(s) 514, 1759
Hpy188I TCNGA 6 cut(s) 297, 542, 938, 1396, 1444, 1450
Hpy8I GTNNAC 2 cut(s) 514, 1759
Hpy99I CGWCG 1 cut(s) 421
HpyAV CCTTC 4 cut(s) 623, 977, 1232, 1350
HpyCH4III ACNGT 4 cut(s) 421, 457, 1273, 1750
HpyCH4IV ACGT 4 cut(s) 202, 213, 485, 703
HpyCH4V TGCA 8 cut(s) 236, 613, 959, 1001, 1409, 1475, 1720, 1745
HpyF3I CTNAG 1 cut(s) 1230
HpySE526I ACGT 4 cut(s) 202, 213, 485, 703
Hsp92II CATG 7 cut(s) 106, 248, 473, 590, 613, 925, 1633
HspAI GCGC 2 cut(s) 77, 414
KflI GGGWCCC 1 cut(s) 1735
Kzo9I GATC 6 cut(s) 622, 769, 933, 1150, 1450, 1816
LguI GCTCTTC 2 cut(s) 41, 1240
LmnI GCTCC 4 cut(s) 104, 154, 811, 1057
LweI GCATC 6 cut(s) 223, 968, 1365, 1459, 1713, 1801
MabI ACCWGGT 1 cut(s) 1213
MaeI CTAG 5 cut(s) 369, 1056, 1226, 1367, 1820
MaeII ACGT 4 cut(s) 202, 213, 485, 703
MaeIII GTNAC 4 cut(s) 198, 203, 896, 1411
MalI GATC 6 cut(s) 624, 771, 935, 1152, 1452, 1818
MboI GATC 6 cut(s) 622, 769, 933, 1150, 1450, 1816
MfeI CAATTG 1 cut(s) 1235
MflI RGATCY 1 cut(s) 1450
MhlI GDGCHC 3 cut(s) 17, 799, 1442
MlsI TGGCCA 1 cut(s) 947
MluCI AATT 8 cut(s) 261, 462, 546, 605, 844, 1186, 1235, 1541
MluNI TGGCCA 1 cut(s) 947
MlyI GAGTC 3 cut(s) 23, 1097, 1913
MmeI TCCRAC 3 cut(s) 31, 275, 1315
Mox20I TGGCCA 1 cut(s) 947
MroXI GAANNNNTTC 4 cut(s) 119, 1362, 1519, 1699
MscI TGGCCA 1 cut(s) 947
MseI TTAA 2 cut(s) 330, 675
MslI CAYNNNNRTG 2 cut(s) 474, 1281
Msp20I TGGCCA 1 cut(s) 947
MspA1I CMGCKG 2 cut(s) 239, 1172
MspR9I CCNGG 5 cut(s) 185, 1215, 1263, 1346, 1626
MunI CAATTG 1 cut(s) 1235
Mva1269I GAATGC 2 cut(s) 89, 1581
MvaI CCWGG 5 cut(s) 185, 1215, 1263, 1346, 1626
MvnI CGCG 3 cut(s) 319, 416, 1420
NcoI CCATGG 1 cut(s) 102
NdeI CATATG 1 cut(s) 390
NdeII GATC 6 cut(s) 622, 769, 933, 1150, 1450, 1816
NlaIII CATG 7 cut(s) 106, 248, 473, 590, 613, 925, 1633
NmeAIII GCCGAG 2 cut(s) 218, 1752
NmuCI GTSAC 4 cut(s) 198, 203, 896, 1411
NruI TCGCGA 1 cut(s) 319
NspI RCATGY 2 cut(s) 473, 925
NspV TTCGAA 1 cut(s) 581
PaqCI CACCTGC 1 cut(s) 922
PasI CCCWGGG 1 cut(s) 1345
PciI ACATGT 1 cut(s) 921
PciSI GCTCTTC 2 cut(s) 41, 1240
PcsI WCGNNNNNNNCGW 1 cut(s) 323
PctI GAATGC 2 cut(s) 89, 1581
PdmI GAANNNNTTC 4 cut(s) 119, 1362, 1519, 1699
PfeI GAWTC 4 cut(s) 1445, 1695, 1700, 1915
PleI GAGTC 3 cut(s) 23, 1096, 1912
PmaCI CACGTG 2 cut(s) 203, 214
PmlI CACGTG 2 cut(s) 203, 214
PpsI GAGTC 3 cut(s) 23, 1096, 1912
Ppu21I YACGTR 2 cut(s) 203, 214
PpuMI RGGWCCY 2 cut(s) 649, 1735
PscI ACATGT 1 cut(s) 921
Psp124BI GAGCTC 1 cut(s) 17
Psp5II RGGWCCY 2 cut(s) 649, 1735
Psp6I CCWGG 5 cut(s) 183, 1213, 1261, 1344, 1624
PspCI CACGTG 2 cut(s) 203, 214
PspFI CCCAGC 1 cut(s) 364
PspGI CCWGG 5 cut(s) 183, 1213, 1261, 1344, 1624
PspOMI GGGCCC 1 cut(s) 795
PspPI GGNCC 8 cut(s) 346, 421, 649, 795, 796, 1266, 1337, 1735
PspPPI RGGWCCY 2 cut(s) 649, 1735
PstI CTGCAG 1 cut(s) 1411
PstNI CAGNNNCTG 1 cut(s) 1754
PsuI RGATCY 1 cut(s) 1450
PvuII CAGCTG 2 cut(s) 239, 1172
RruI TCGCGA 1 cut(s) 319
RsaI GTAC 2 cut(s) 1184, 1500
RsaNI GTAC 2 cut(s) 1183, 1499
RseI CAYNNNNRTG 2 cut(s) 474, 1281
SacI GAGCTC 1 cut(s) 17
SapI GCTCTTC 2 cut(s) 41, 1240
SaqAI TTAA 2 cut(s) 330, 675
Sau3AI GATC 6 cut(s) 622, 769, 933, 1150, 1450, 1816
Sau96I GGNCC 8 cut(s) 346, 421, 649, 795, 796, 1266, 1337, 1735
SchI GAGTC 3 cut(s) 23, 1097, 1913
ScrFI CCNGG 5 cut(s) 185, 1215, 1263, 1346, 1626
SduI GDGCHC 3 cut(s) 17, 799, 1442
SexAI ACCWGGT 1 cut(s) 1213
SfaNI GCATC 6 cut(s) 223, 968, 1365, 1459, 1713, 1801
SfcI CTRYAG 2 cut(s) 1407, 1886
SfuI TTCGAA 1 cut(s) 581
SinI GGWCC 5 cut(s) 346, 421, 649, 1337, 1735
SmiMI CAYNNNNRTG 2 cut(s) 474, 1281
SmlI CTYRAG 2 cut(s) 149, 497
SmoI CTYRAG 2 cut(s) 149, 497
Sse9I AATT 8 cut(s) 261, 462, 546, 605, 844, 1186, 1235, 1541
SsiI CCGC 5 cut(s) 596, 1071, 1300, 1418, 1877
SspMI CTAG 5 cut(s) 369, 1056, 1226, 1367, 1820
SstI GAGCTC 1 cut(s) 17
StyD4I CCNGG 5 cut(s) 183, 1213, 1261, 1344, 1624
StyI CCWWGG 1 cut(s) 102
TaaI ACNGT 4 cut(s) 421, 457, 1273, 1750
TaiI ACGT 4 cut(s) 205, 216, 488, 706
TaqI TCGA 5 cut(s) 405, 581, 1356, 1531, 1698
TasI AATT 8 cut(s) 261, 462, 546, 605, 844, 1186, 1235, 1541
TatI WGTACW 1 cut(s) 1182
TfiI GAWTC 4 cut(s) 1445, 1695, 1700, 1915
Tru1I TTAA 2 cut(s) 330, 675
Tru9I TTAA 2 cut(s) 330, 675
TscAI CASTG 3 cut(s) 130, 955, 1276
TseFI GTSAC 4 cut(s) 198, 203, 896, 1411
Tsp45I GTSAC 4 cut(s) 198, 203, 896, 1411
TspGWI ACGGA 1 cut(s) 1324
TspRI CASTG 3 cut(s) 130, 955, 1276
VpaK11BI GGWCC 5 cut(s) 346, 421, 649, 1337, 1735
XapI RAATTY 1 cut(s) 605
XbaI TCTAGA 1 cut(s) 1366
XceI RCATGY 2 cut(s) 473, 925
XcmI CCANNNNNNNNNTGG 1 cut(s) 14
XmnI GAANNNNTTC 4 cut(s) 119, 1362, 1519, 1699
XspI CTAG 5 cut(s) 369, 1056, 1226, 1367, 1820
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.