RLG00000025735

Phosphoribosylaminoimidazole carboxylase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr5
OG0008753
Physical Location & Seq
Forward (+)
47952103 .. 47956997
4895 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000025735

Sequence Viewer

Length: 1920 bp
ATGCTTCAGCAGAGCTCCCGCTTCGCCACCGATTTCGGGTTTAGGCCGTGTTTGGTTCTCCCCAATAATACCAAAAACCCATTCTTCTCTTCCTCCATGGACCTCAAACCAACCCACGCCAAGCTCCCAACTTTTACTCCTGCTTCTTCTTCTCGCTCACTAAACCAGGCCTTGGCTTGCCGGGCGTCACGTGATTCTCACGTGACCACTTCTCCCAGTGCAGATGGTTTAGCTGTTGTTCATGGATTGTCTGAGACCATTGTGGGTGTTCTTGGAGGAGGCCAGCTGGGTCGAATGCTGTGCCAGGCAGCTTCACAAATGGCTATTAAGGTGATGGTATTGGACCCACAGGAGAATTGTCCGGCGAGTAGACTTGCCTATCACCATATGGTTGGGAGCTTTGATGACAGTGCCACTGTCCAAGAATTCGCGAAAAGGTGTGGAGTGTTGACGGTGGAAATCGAACATGTGGATGTGGAGACATTGGAGAAGCTTGAGCAGCAAGGAGTAGACTGCCAGCCAAAAGCCTCTACAATCAGAATAATACAGGATAAATATCTTCAGAAGGTTCACTTTTCGCGGCATGATATTCCACTTCCTGAATTTATGCAGATAGATGATCTGGAAGGTGCTAAGAGGGCAGGCGACCTATTTGACTATCCTCTAATGATAAAGAGTAAAAGATTAGCTTATGATGGGCGTGGAAATGCTGTTGCTAAGAGTGAGCATGATCTTTCTTCTGCTGTAACAGCTCTTGGAGGGTTTGATCGCGGTTTGTATGTTGAGAAATGGGCCCCTTTTGTAAAGGAGCTGGCCGTCATTGTTGCTAGAGGAAGAGACAATTCTATCATGTGCTATCCTGTTGTTGAAACTATACACAAGGAAAACATTTGCCACATTGTCAAAGCACCTGCTAACGTGCCATGGAAGATCCGAAAGTTGGCCACTGACATTGCATCTAGAGCTATTAGTTCATTAGAAGGCGCTGGTGTGTTTGCAGTTGAGTTGTTCTTGACAGAGGATGATCAGATTTTGCTAAATGAAGTAGCTCCCAGACCTCACAATAGCGGTCATCACACAATAGAGTCTTGCTACACCTCACAGTATGAACAGCATTTGCGGGCTGTTGTTGGTCTTCCACTTGGTGATCCATCAATGAAAACTCCTGCTGCAATTATGTACAATTTACTTGGTGAAGATGAGGGGGAAGCTGGTTTCCACCTAGCTCATCAAGTGATTGGAAGAGCCTTGAGTATTCGAGGGGCTACTGTTCATTGGTATGATAAGCCAGATATGCGGAAGCAACGGAAAATGGGTCATATTACCATTGTTGGACCTTCCATGGGCAATGTGGAAAAAGCTTTGGATTCAATGCTAAATGACAAAATATCTGATAGTCAGTCCGCTGCCACACCACGTGTTGGGATCATAATGGGTTCTGATTCAGATCTTGCTGTTATGAAGGATGCTGCAAAAGTTTTGAATATGTTTGAAGTGCCTCACGAGGTTAGGATAGTTTCTGCGCATCGAACTCCTGATTGGATGCATTCTTATGCCTTGTCTGCCCAGGAAAGGGGAATTCAGGTCATCATTGCTGGTGCTGGTGGCGCAGCTCACTTGCCAGGAATGGTAGCTGCATCCACTCCATTACCCGTTATTGGTGTCCCTGTGCGTGCCTCTACATTGGATGGAGTTGATTCGGTTCTATCTATATTGCAGATGCCAAGAGGGGTCCCGGTTGCAACAGTTGCTATAAACAATGCCACCAATGCTGGTTTGCTAGCAGTAAGGATGTTAGCTGTTTGTGATGCTGATCTACTTGCACGAATCAGCCAGTATCAAGAAGACACAAAGAGCGAAGTCTTGGCAAAAGATGAGAAGCTACAGAAAGTTGGTTGGGAATCTTATTTGAATCCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00230 ko01100 ko01110 map00230 map01100 map01110
Pfam Domains
Protein Families
AIRC ATP-grasp

Protein Analysis

640

Amino Acids

69.4

Weight (kDa)

6.29

Isoelectric Point (pI)

41.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RS_preATP-grasp-like PF22660 88 - 183 7.4e-32 Ribonucleotide synthetase preATP-grasp domain
ATP-grasp PF02222 191 - 369 3.4e-63 ATP-grasp domain
Dala_Dala_lig_C PF07478 214 - 353 2.8e-08 D-ala D-ala ligase C-terminus
PurK_C PF17769 391 - 453 3.4e-17 Phosphoribosylaminoimidazole carboxylase C-terminal domain
AIRC PF00731 473 - 618 1.6e-63 AIR carboxylase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 919
Acc16I TGCGCA 1 cut(s) 1524
Acc36I ACCTGC 1 cut(s) 919
AccB7I CCANNNNNTGG 2 cut(s) 172, 1421
AccI GTMKAC 2 cut(s) 370, 510
AccII CGCG 3 cut(s) 431, 580, 771
AciI CCGC 7 cut(s) 19, 580, 771, 1068, 1120, 1297, 1404
AclWI GGATC 3 cut(s) 925, 1142, 1433
AcoI YGGCCR 2 cut(s) 813, 942
AcsI RAATTY 3 cut(s) 425, 602, 1578
AcuI CTGAAG 1 cut(s) 545
AcvI CACGTG 3 cut(s) 191, 202, 1418
AcyI GRCGYC 1 cut(s) 185
AdeI CACNNNGTG 2 cut(s) 1145, 1418
AfaI GTAC 1 cut(s) 1181
AfiI CCNNNNNNNGG 8 cut(s) 36, 172, 940, 1343, 1421, 1572, 1573, 1658
AflIII ACRYGT 2 cut(s) 466, 1417
AgsI TTSAA 5 cut(s) 869, 1371, 1483, 1493, 1912
AjnI CCWGG 4 cut(s) 165, 303, 1566, 1621
AjuI GAANNNNNNNTTGG 4 cut(s) 65, 97, 1522, 1554
Alw21I GWGCWC 1 cut(s) 17
Alw26I GTCTC 3 cut(s) 248, 473, 831
AlwI GGATC 3 cut(s) 925, 1142, 1433
AoxI GGCC 6 cut(s) 44, 168, 280, 792, 813, 942
ApaI GGGCCC 1 cut(s) 796
ApeKI GCWGC 7 cut(s) 308, 499, 1169, 1406, 1469, 1610, 1634
ApoI RAATTY 3 cut(s) 425, 602, 1578
AspLEI GCGC 3 cut(s) 986, 1525, 1610
AspS9I GGNCC 6 cut(s) 100, 343, 792, 793, 1334, 1732
AsuC2I CCSGG 2 cut(s) 182, 1736
AsuHPI GGTGA 4 cut(s) 343, 374, 1157, 1205
AsuNHI GCTAGC 1 cut(s) 1780
AvaII GGWCC 4 cut(s) 100, 343, 1334, 1732
BaeGI GKGCMC 1 cut(s) 796
BalI TGGCCA 1 cut(s) 944
BanII GRGCYC 2 cut(s) 17, 796
BauI CACGAG 1 cut(s) 1502
BbrPI CACGTG 3 cut(s) 191, 202, 1418
BbsI GAAGAC 2 cut(s) 1127, 1851
Bbv12I GWGCWC 1 cut(s) 17
BbvI GCAGC 7 cut(s) 320, 511, 1156, 1393, 1456, 1621, 1622
BccI CCATC 5 cut(s) 218, 328, 689, 1159, 1682
BceAI ACGGC 2 cut(s) 31, 800
BcgI CGANNNNNNTGC 2 cut(s) 282, 316
BciT130I CCWGG 4 cut(s) 167, 305, 1568, 1623
BclI TGATCA 1 cut(s) 1024
BcnI CCSGG 2 cut(s) 182, 1736
BcoDI GTCTC 3 cut(s) 248, 473, 831
BfaI CTAG 4 cut(s) 828, 960, 1223, 1781
BfmI CTRYAG 1 cut(s) 1883
BfoI RGCGCY 1 cut(s) 987
BfuAI ACCTGC 1 cut(s) 919
BglII AGATCT 1 cut(s) 1447
BisI GCNGC 8 cut(s) 309, 500, 581, 1170, 1407, 1470, 1611, 1635
BlsI GCNGC 8 cut(s) 310, 501, 582, 1171, 1408, 1471, 1612, 1636
Bme1390I CCNGG 6 cut(s) 167, 182, 305, 1568, 1623, 1736
Bme18I GGWCC 4 cut(s) 100, 343, 1334, 1732
BmgT120I GGNCC 6 cut(s) 100, 343, 792, 793, 1334, 1732
BmiI GGNNCC 5 cut(s) 345, 794, 795, 1733, 1734
BmrFI CCNGG 6 cut(s) 167, 182, 305, 1568, 1623, 1736
BmrI ACTGGG 1 cut(s) 210
BmsI GCATC 7 cut(s) 965, 1456, 1533, 1534, 1646, 1710, 1798
BmtI GCTAGC 1 cut(s) 1784
BmuI ACTGGG 1 cut(s) 210
BpiI GAAGAC 2 cut(s) 1127, 1851
BpuEI CTTGAG 2 cut(s) 515, 1270
BpuMI CCSGG 2 cut(s) 182, 1736
BsaAI YACGTR 3 cut(s) 191, 202, 1418
BsaBI GATNNNNATC 3 cut(s) 555, 1446, 1812
BsaHI GRCGYC 1 cut(s) 185
BsaI GGTCTC 1 cut(s) 248
BsaJI CCNNGG 5 cut(s) 96, 171, 923, 1341, 1566
BsaXI ACNNNNNCTCC 4 cut(s) 121, 151, 196, 226
Bsc4I CCNNNNNNNGG 8 cut(s) 36, 172, 940, 1343, 1421, 1572, 1573, 1658
Bse1I ACTGG 2 cut(s) 216, 1834
Bse3DI GCAATG 3 cut(s) 951, 1354, 1590
Bse8I GATNNNNATC 3 cut(s) 555, 1446, 1812
BseBI CCWGG 4 cut(s) 167, 305, 1568, 1623
BseDI CCNNGG 5 cut(s) 96, 171, 923, 1341, 1566
BseGI GGATG 7 cut(s) 478, 1027, 1471, 1548, 1637, 1693, 1797
BseJI GATNNNNATC 3 cut(s) 555, 1446, 1812
BseLI CCNNNNNNNGG 8 cut(s) 36, 172, 940, 1343, 1421, 1572, 1573, 1658
BseMI GCAATG 3 cut(s) 951, 1354, 1590
BseMII CTCAG 1 cut(s) 243
BseNI ACTGG 2 cut(s) 216, 1834
BseRI GAGGAG 1 cut(s) 291
BseSI GKGCMC 1 cut(s) 796
BseXI GCAGC 7 cut(s) 320, 511, 1156, 1393, 1456, 1621, 1622
BseYI CCCAGC 1 cut(s) 286
BsgI GTGCAG 1 cut(s) 240
Bsh1236I CGCG 3 cut(s) 431, 580, 771
BshFI GGCC 6 cut(s) 46, 170, 282, 794, 815, 944
BsiHKAI GWGCWC 1 cut(s) 17
BsiSI CCGG 3 cut(s) 181, 362, 1736
BslFI GGGAC 2 cut(s) 1649, 1718
BslI CCNNNNNNNGG 8 cut(s) 36, 172, 940, 1343, 1421, 1572, 1573, 1658
BsmAI GTCTC 3 cut(s) 248, 473, 831
BsmFI GGGAC 2 cut(s) 1649, 1718
BsmI GAATGC 2 cut(s) 300, 1546
BsnI GGCC 6 cut(s) 46, 170, 282, 794, 815, 944
Bso31I GGTCTC 1 cut(s) 248
Bsp120I GGGCCC 1 cut(s) 792
Bsp1286I GDGCHC 2 cut(s) 17, 796
Bsp1407I TGTACA 1 cut(s) 1179
Bsp143I GATC 9 cut(s) 619, 730, 766, 930, 1024, 1147, 1425, 1447, 1813
Bsp19I CCATGG 3 cut(s) 96, 923, 1341
Bsp68I TCGCGA 1 cut(s) 431
BspACI CCGC 7 cut(s) 19, 580, 771, 1068, 1120, 1297, 1404
BspANI GGCC 6 cut(s) 46, 170, 282, 794, 815, 944
BspCNI CTCAG 1 cut(s) 244
BspFNI CGCG 3 cut(s) 431, 580, 771
BspLI GGNNCC 5 cut(s) 345, 794, 795, 1733, 1734
BspMI ACCTGC 1 cut(s) 919
BspOI GCTAGC 1 cut(s) 1784
BspPI GGATC 3 cut(s) 925, 1142, 1433
BspQI GCTCTTC 1 cut(s) 1237
BspTNI GGTCTC 1 cut(s) 248
BsrDI GCAATG 3 cut(s) 951, 1354, 1590
BsrGI TGTACA 1 cut(s) 1179
BsrI ACTGG 2 cut(s) 216, 1834
BssECI CCNNGG 5 cut(s) 96, 171, 923, 1341, 1566
BssMI GATC 9 cut(s) 619, 730, 766, 930, 1024, 1147, 1425, 1447, 1813
BssNI GRCGYC 1 cut(s) 185
BssSI CACGAG 1 cut(s) 1502
BssT1I CCWWGG 4 cut(s) 96, 171, 923, 1341
Bst2BI CACGAG 1 cut(s) 1502
Bst2UI CCWGG 4 cut(s) 167, 305, 1568, 1623
Bst4CI ACNGT 6 cut(s) 410, 418, 454, 1104, 1270, 1747
Bst6I CTCTTC 3 cut(s) 94, 829, 1237
BstACI GRCGYC 1 cut(s) 185
BstAPI GCANNNNNTGC 1 cut(s) 1748
BstAUI TGTACA 1 cut(s) 1179
BstBAI YACGTR 3 cut(s) 191, 202, 1418
BstC8I GCNNGC 8 cut(s) 178, 284, 518, 643, 813, 1122, 1674, 1782
BstDEI CTNAG 3 cut(s) 252, 633, 717
BstDSI CCRYGG 3 cut(s) 96, 923, 1341
BstF5I GGATG 7 cut(s) 478, 1027, 1471, 1548, 1637, 1693, 1797
BstFNI CGCG 3 cut(s) 431, 580, 771
BstH2I RGCGCY 1 cut(s) 987
BstHHI GCGC 3 cut(s) 986, 1525, 1610
BstKTI GATC 9 cut(s) 622, 733, 769, 933, 1027, 1150, 1428, 1450, 1816
BstMAI GTCTC 3 cut(s) 248, 473, 831
BstMBI GATC 9 cut(s) 619, 730, 766, 930, 1024, 1147, 1425, 1447, 1813
BstNI CCWGG 4 cut(s) 167, 305, 1568, 1623
BstNSI RCATGY 1 cut(s) 470
BstSCI CCNGG 6 cut(s) 165, 180, 303, 1566, 1621, 1734
BstSFI CTRYAG 1 cut(s) 1883
BstSLI GKGCMC 1 cut(s) 796
BstUI CGCG 3 cut(s) 431, 580, 771
BstV1I GCAGC 7 cut(s) 320, 511, 1156, 1393, 1456, 1621, 1622
BstV2I GAAGAC 2 cut(s) 1127, 1851
BstX2I RGATCY 2 cut(s) 930, 1447
BstXI CCANNNNNNTGG 1 cut(s) 392
BstYI RGATCY 2 cut(s) 930, 1447
BsuRI GGCC 6 cut(s) 46, 170, 282, 794, 815, 944
BtgI CCRYGG 3 cut(s) 96, 923, 1341
BtsCI GGATG 7 cut(s) 478, 1027, 1471, 1548, 1637, 1693, 1797
BtsIMutI CAGTG 4 cut(s) 223, 414, 415, 945
BtuMI TCGCGA 1 cut(s) 431
BveI ACCTGC 1 cut(s) 919
Cac8I GCNNGC 8 cut(s) 178, 284, 518, 643, 813, 1122, 1674, 1782
CfoI GCGC 3 cut(s) 986, 1525, 1610
Cfr13I GGNCC 6 cut(s) 100, 343, 792, 793, 1334, 1732
CseI GACGC 1 cut(s) 174
Csp6I GTAC 1 cut(s) 1180
CspCI CAANNNNNGTGG 2 cut(s) 934, 969
CviAII CATG 8 cut(s) 97, 242, 467, 584, 728, 850, 924, 1342
CviQI GTAC 1 cut(s) 1180
DdeI CTNAG 3 cut(s) 252, 633, 717
DpnI GATC 9 cut(s) 621, 732, 768, 932, 1026, 1149, 1427, 1449, 1815
DpnII GATC 9 cut(s) 619, 730, 766, 930, 1024, 1147, 1425, 1447, 1813
DraIII CACNNNGTG 2 cut(s) 1145, 1418
EaeI YGGCCR 2 cut(s) 813, 942
Eam1104I CTCTTC 3 cut(s) 94, 829, 1237
EarI CTCTTC 3 cut(s) 94, 829, 1237
Ecl136II GAGCTC 1 cut(s) 15
Eco130I CCWWGG 4 cut(s) 96, 171, 923, 1341
Eco147I AGGCCT 1 cut(s) 170
Eco24I GRGCYC 2 cut(s) 17, 796
Eco31I GGTCTC 1 cut(s) 248
Eco47I GGWCC 4 cut(s) 100, 343, 1334, 1732
Eco53kI GAGCTC 1 cut(s) 15
Eco57I CTGAAG 1 cut(s) 545
Eco72I CACGTG 3 cut(s) 191, 202, 1418
EcoICRI GAGCTC 1 cut(s) 15
EcoO109I RGGNCCY 2 cut(s) 793, 1732
EcoRI GAATTC 2 cut(s) 425, 1578
EcoRII CCWGG 4 cut(s) 165, 303, 1566, 1621
EcoT14I CCWWGG 4 cut(s) 96, 171, 923, 1341
EcoT22I ATGCAT 1 cut(s) 1548
EcoT38I GRGCYC 2 cut(s) 17, 796
ErhI CCWWGG 4 cut(s) 96, 171, 923, 1341
FaeI CATG 8 cut(s) 100, 245, 470, 587, 731, 853, 927, 1345
FalI AAGNNNNNCTT 4 cut(s) 557, 589, 673, 705
FaqI GGGAC 2 cut(s) 1649, 1718
FatI CATG 8 cut(s) 96, 241, 466, 583, 727, 849, 923, 1341
FauI CCCGC 2 cut(s) 26, 1113
FauNDI CATATG 1 cut(s) 387
FbaI TGATCA 1 cut(s) 1024
FblI GTMKAC 2 cut(s) 370, 510
Fnu4HI GCNGC 8 cut(s) 309, 500, 581, 1170, 1407, 1470, 1611, 1635
FokI GGATG 7 cut(s) 485, 1034, 1478, 1555, 1624, 1700, 1804
FriOI GRGCYC 2 cut(s) 17, 796
Fsp4HI GCNGC 8 cut(s) 309, 500, 581, 1170, 1407, 1470, 1611, 1635
FspBI CTAG 4 cut(s) 828, 960, 1223, 1781
FspI TGCGCA 1 cut(s) 1524
GlaI GCGC 3 cut(s) 985, 1524, 1609
GluI GCNGC 8 cut(s) 309, 500, 581, 1170, 1407, 1470, 1611, 1635
GsaI CCCAGC 1 cut(s) 290
HaeII RGCGCY 1 cut(s) 987
HaeIII GGCC 6 cut(s) 46, 170, 282, 794, 815, 944
HapII CCGG 3 cut(s) 181, 362, 1736
HgaI GACGC 1 cut(s) 174
HhaI GCGC 3 cut(s) 986, 1525, 1610
Hin1I GRCGYC 1 cut(s) 185
Hin1II CATG 8 cut(s) 100, 245, 470, 587, 731, 853, 927, 1345
Hin6I GCGC 3 cut(s) 984, 1523, 1608
HinP1I GCGC 3 cut(s) 984, 1523, 1608
HincII GTYRAC 1 cut(s) 450
HindII GTYRAC 1 cut(s) 450
HindIII AAGCTT 2 cut(s) 491, 1359
HinfI GANTC 8 cut(s) 194, 1085, 1367, 1442, 1697, 1827, 1901, 1912
HpaII CCGG 3 cut(s) 181, 362, 1736
HphI GGTGA 4 cut(s) 343, 374, 1157, 1205
Hpy166II GTNNAC 4 cut(s) 371, 450, 511, 571
Hpy188I TCNGA 8 cut(s) 253, 539, 564, 935, 1029, 1393, 1441, 1447
Hpy188III TCNNGA 8 cut(s) 430, 599, 623, 960, 1012, 1502, 1535, 1841
Hpy8I GTNNAC 4 cut(s) 371, 450, 511, 571
HpyAV CCTTC 5 cut(s) 559, 620, 974, 1347, 1456
HpyCH4III ACNGT 6 cut(s) 410, 418, 454, 1104, 1270, 1747
HpyCH4IV ACGT 4 cut(s) 190, 201, 918, 1417
HpyF3I CTNAG 3 cut(s) 252, 633, 717
HpySE526I ACGT 4 cut(s) 190, 201, 918, 1417
Hsp92I GRCGYC 1 cut(s) 185
Hsp92II CATG 8 cut(s) 100, 245, 470, 587, 731, 853, 927, 1345
HspAI GCGC 3 cut(s) 984, 1523, 1608
KflI GGGWCCC 1 cut(s) 1732
Ksp22I TGATCA 1 cut(s) 1024
Kzo9I GATC 9 cut(s) 619, 730, 766, 930, 1024, 1147, 1425, 1447, 1813
LguI GCTCTTC 1 cut(s) 1237
LmnI GCTCC 5 cut(s) 20, 129, 396, 808, 1054
Lsp1109I GCAGC 7 cut(s) 320, 511, 1156, 1393, 1456, 1621, 1622
LweI GCATC 7 cut(s) 965, 1456, 1533, 1534, 1646, 1710, 1798
MaeI CTAG 4 cut(s) 828, 960, 1223, 1781
MaeII ACGT 4 cut(s) 190, 201, 918, 1417
MaeIII GTNAC 3 cut(s) 186, 202, 745
MalI GATC 9 cut(s) 621, 732, 768, 932, 1026, 1149, 1427, 1449, 1815
MboI GATC 9 cut(s) 619, 730, 766, 930, 1024, 1147, 1425, 1447, 1813
MflI RGATCY 2 cut(s) 930, 1447
MhlI GDGCHC 2 cut(s) 17, 796
MlsI TGGCCA 1 cut(s) 944
MluCI AATT 7 cut(s) 355, 425, 602, 841, 1173, 1183, 1578
MluNI TGGCCA 1 cut(s) 944
MlyI GAGTC 1 cut(s) 1094
MmeI TCCRAC 1 cut(s) 1312
Mox20I TGGCCA 1 cut(s) 944
Mph1103I ATGCAT 1 cut(s) 1548
MscI TGGCCA 1 cut(s) 944
MseI TTAA 1 cut(s) 327
MslI CAYNNNNRTG 3 cut(s) 471, 1278, 1551
Msp20I TGGCCA 1 cut(s) 944
MspA1I CMGCKG 2 cut(s) 286, 1406
MspI CCGG 3 cut(s) 181, 362, 1736
MspR9I CCNGG 6 cut(s) 167, 182, 305, 1568, 1623, 1736
Mva1269I GAATGC 2 cut(s) 300, 1546
MvaI CCWGG 4 cut(s) 167, 305, 1568, 1623
MvnI CGCG 3 cut(s) 431, 580, 771
NciI CCSGG 2 cut(s) 182, 1736
NcoI CCATGG 3 cut(s) 96, 923, 1341
NdeI CATATG 1 cut(s) 387
NdeII GATC 9 cut(s) 619, 730, 766, 930, 1024, 1147, 1425, 1447, 1813
NheI GCTAGC 1 cut(s) 1780
NlaIII CATG 8 cut(s) 100, 245, 470, 587, 731, 853, 927, 1345
NlaIV GGNNCC 5 cut(s) 345, 794, 795, 1733, 1734
NmuCI GTSAC 2 cut(s) 186, 202
NruI TCGCGA 1 cut(s) 431
NsbI TGCGCA 1 cut(s) 1524
NsiI ATGCAT 1 cut(s) 1548
NspI RCATGY 1 cut(s) 470
PaqCI CACCTGC 1 cut(s) 919
PceI AGGCCT 1 cut(s) 170
PciI ACATGT 1 cut(s) 466
PciSI GCTCTTC 1 cut(s) 1237
PctI GAATGC 2 cut(s) 300, 1546
PfeI GAWTC 7 cut(s) 194, 1367, 1442, 1697, 1827, 1901, 1912
PflMI CCANNNNNTGG 2 cut(s) 172, 1421
PkrI GCNGC 8 cut(s) 310, 501, 582, 1171, 1408, 1471, 1612, 1636
PleI GAGTC 1 cut(s) 1093
PmaCI CACGTG 3 cut(s) 191, 202, 1418
PmlI CACGTG 3 cut(s) 191, 202, 1418
PpsI GAGTC 1 cut(s) 1093
Ppu21I YACGTR 3 cut(s) 191, 202, 1418
PpuMI RGGWCCY 1 cut(s) 1732
PscI ACATGT 1 cut(s) 466
Psp124BI GAGCTC 1 cut(s) 17
Psp5II RGGWCCY 1 cut(s) 1732
Psp6I CCWGG 4 cut(s) 165, 303, 1566, 1621
PspCI CACGTG 3 cut(s) 191, 202, 1418
PspFI CCCAGC 1 cut(s) 286
PspGI CCWGG 4 cut(s) 165, 303, 1566, 1621
PspN4I GGNNCC 5 cut(s) 345, 794, 795, 1733, 1734
PspOMI GGGCCC 1 cut(s) 792
PspPI GGNCC 6 cut(s) 100, 343, 792, 793, 1334, 1732
PspPPI RGGWCCY 1 cut(s) 1732
PsuI RGATCY 2 cut(s) 930, 1447
PvuII CAGCTG 1 cut(s) 286
RruI TCGCGA 1 cut(s) 431
RsaI GTAC 1 cut(s) 1181
RsaNI GTAC 1 cut(s) 1180
RseI CAYNNNNRTG 3 cut(s) 471, 1278, 1551
SacI GAGCTC 1 cut(s) 17
SapI GCTCTTC 1 cut(s) 1237
SaqAI TTAA 1 cut(s) 327
SatI GCNGC 8 cut(s) 309, 500, 581, 1170, 1407, 1470, 1611, 1635
Sau3AI GATC 9 cut(s) 619, 730, 766, 930, 1024, 1147, 1425, 1447, 1813
Sau96I GGNCC 6 cut(s) 100, 343, 792, 793, 1334, 1732
SchI GAGTC 1 cut(s) 1094
ScrFI CCNGG 6 cut(s) 167, 182, 305, 1568, 1623, 1736
SduI GDGCHC 2 cut(s) 17, 796
SfaNI GCATC 7 cut(s) 965, 1456, 1533, 1534, 1646, 1710, 1798
SfcI CTRYAG 1 cut(s) 1883
SinI GGWCC 4 cut(s) 100, 343, 1334, 1732
SmiMI CAYNNNNRTG 3 cut(s) 471, 1278, 1551
SmlI CTYRAG 2 cut(s) 494, 1249
SmoI CTYRAG 2 cut(s) 494, 1249
Sse9I AATT 7 cut(s) 355, 425, 602, 841, 1173, 1183, 1578
SseBI AGGCCT 1 cut(s) 170
SsiI CCGC 7 cut(s) 19, 580, 771, 1068, 1120, 1297, 1404
SspMI CTAG 4 cut(s) 828, 960, 1223, 1781
SstI GAGCTC 1 cut(s) 17
StuI AGGCCT 1 cut(s) 170
StyD4I CCNGG 6 cut(s) 165, 180, 303, 1566, 1621, 1734
StyI CCWWGG 4 cut(s) 96, 171, 923, 1341
TaaI ACNGT 6 cut(s) 410, 418, 454, 1104, 1270, 1747
TaiI ACGT 4 cut(s) 193, 204, 921, 1420
TaqI TCGA 4 cut(s) 292, 462, 1258, 1528
TasI AATT 7 cut(s) 355, 425, 602, 841, 1173, 1183, 1578
TatI WGTACW 1 cut(s) 1179
TauI GCSGC 1 cut(s) 583
TfiI GAWTC 7 cut(s) 194, 1367, 1442, 1697, 1827, 1901, 1912
Tru1I TTAA 1 cut(s) 327
Tru9I TTAA 1 cut(s) 327
TscAI CASTG 4 cut(s) 223, 415, 421, 952
TseFI GTSAC 2 cut(s) 186, 202
TseI GCWGC 7 cut(s) 308, 499, 1169, 1406, 1469, 1610, 1634
Tsp45I GTSAC 2 cut(s) 186, 202
TspDTI ATGAA 7 cut(s) 230, 963, 1056, 1122, 1172, 1262, 1475
TspGWI ACGGA 1 cut(s) 1321
TspRI CASTG 4 cut(s) 223, 415, 421, 952
Van91I CCANNNNNTGG 2 cut(s) 172, 1421
VpaK11BI GGWCC 4 cut(s) 100, 343, 1334, 1732
XapI RAATTY 3 cut(s) 425, 602, 1578
XbaI TCTAGA 1 cut(s) 959
XceI RCATGY 1 cut(s) 470
XcmI CCANNNNNNNNNTGG 1 cut(s) 1348
XmiI GTMKAC 2 cut(s) 370, 510
XspI CTAG 4 cut(s) 828, 960, 1223, 1781
Zsp2I ATGCAT 1 cut(s) 1548
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.