Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0012025

Physical Location & Seq

Genomic Coordinates Forward (+)

7294910 .. 7302520

Gene Structure 7611 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g12911.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2982 bp

ATGGACTCGGACGAAGAAGACTTCGTATTCTACGGAACGCCGATAGCTCGCGAGGATGACGTCACCACCAGCCGGAAGAAGAAGTCCGTCGCCGAAGCCTCCGGTCAGCTGCGCACTCTCGCTCCTTGGAAGCAAGAGGTTAGAGATGAAGAAGGGAGAAGAAGATTTCACGGAGCCTTTAGCGGAGGGTATTCTGCTGGATACTACAACACAGTGGGCTCGAAAGAGGGTTGGACACCACAGACCTTTGTGTCTTCCCGTAAGAACAGAGCTGAAGTCAAACAGCAGGACATTTTGAACTTTCTGGATGAAGATGAAAGAGCTGAAATGGAAGGTCAATCTTTGGGGACATCTTCGCAGTTTGATACATTTGGATTGACAGCTGCAGATCACGCTAGAAAACATGCAGAAAAGGAACAGCAGAAAAGGCCATCAGCTATTCCTGGACCTGTTCCTGATGAATTGGTACTTCCAGCCACAGATTCTATAGGTGTAAAATTGCTGCTGAAGATGGGATGGCGCCATGGTCGTTCAATTAAGGATTCACATGCTGATGTAGCATATGATGCTCGAAGGGAAGGTAGAAAAGCTTTCTTAGCATTTTCTGCTAATGATGCGAAAACACAGCTGGCTGACTCCGATCCCATTCATGATAATTCTGAAAATTATTCAGAGCAGCATGCAAGTGATGATGTTCGATCTTCACAAAATACACCTGTTTATGTACTCAACCCAAAGCAGGATATGCATGGATTAGGCTTTGATCCTTTTAAGCATGCTCCTGAGTTTAGGGAAAAGAAAAGGTCACGTGTATCTGATAATAGGGGCCCTGGAAACAAAAGTTCTCTTTTACTGAAGAATAGTCTATTTGGCTTGAAGTCAGGAAAAGCTGCTCCTGGTTTTGGAATTGGAGCACTTGAAGACTTTGATGCTGAAGATGAGGATGTGTATGGCTCTGGCTATGACTTTGAGGAGACTTATGTTGAAGATATTGATGAGCCAACAAAATTGATCATGGATAGTAAGCAAACGTCTGTTAGAAAGGAACCAGGTGCTCTCTCTGGATTTAGACTTGCATCAAATTCTGACTACCAACTTGAAAGATTTGATCCTCCTGTAGTTCCAAAGGATTTTGTACCCCAACATAAATTTTCTGGGCCTCCTGAGACTAGCTACAAGCTTGGAGATCCTGGGCCCCCGGAAGTCCCTCCTCCTCAGGATAATAATCTGAAAGTGTTAATTGATGGGGTGGCAACTTTAGTAGCTCGATGCGGCAAATTATTTGAGGATCTCTCAAGAGAGAAAAATCAATCAAATCCAATGTTCAGTTTCCTTGTTGGAGGAAATGGTCATGAGTATTATGCAAGGAAGCTGTGGGAGGAGCAACAGAAGAGAGGAGATCAAACTAAGCTGCAATTAGATGGTAAATTGTCTCCAAGAACACAGAAAATGACAGCAGAGGGTCGTGGGAAACTTTTAGGGGAAAGGCCTTTGGAGCGAAGCTCTAAAGACTCGAGTACATCAATTTCTTCCACTGATGCCATTCATCTTCAGTACAATCTTTCAGATACATTTACTGATCCCTCATCATATAGTGAAATGCCAGTAGTCGCAAAACCCTTCATAAATGATGCAGCAAAGCAAGAAAGATTTGAGCAGTTTCTGCACGACAAGTACCAAGGAGGGCTTCGATCTACCGAGTCCGGTAGAGCTAGTCATATGTCAGAAGCAGCTCGTGCTCTTGAGAGATTAGACTTTGAAGTTGCAGCCGAGGCAATAAAAAAAGGGAAATGGAGTAAAGAGATATCCACATCACTTACTGGAGGGATGGAATTTACTTCTGGGGGATTTGTGCAAGCTAAAGATACTCAAGCTGAAGATGCGATCCCAAAGGAAGTCCATGTAAAACGAACAGAATATCAATGGCGTCCCTCACCTATCCTATGCAAACGCTTTGATCTGATTGATCCTTATATGGGGAAGCCACCACCAGCTCCACGATCCAAGAGTAAAATCGAAACTCTCATTTTCACATCCGATTCTGTAAAAGCGACTAAAGAAGAAGAAACTATAATTGTAAAGAGAGACTCATACCACATTCCTCAACCTGAGCCCCAAGGAATAAGCAAAGACGTAGCTGACGATGAAAGTGGTGGTGAGGTAGAAGTTGAAAACGTTGAGAGGCCTGTTGACCTTTACAAGGCTATCTTTTCTGATGATTCAGATGATGAGGAGGATATCTCTACTCCTAATGAAGTTAATCCAGAGAAGAAGGTTGAAGCAGCTAATACAACATTAAACCGTTTGATTGCAGGTGACTTTTTGGAATCTTTGGGTAAAGAACTTGGCCTAGAGGTTCCGCCCGAGTTGCCTTCCTCAACAAACAAAACCATGAATTCTGCTCCTCCCAAAGAGATTGCCAATGCCAATTCAAGAATTTACAATACTTACCCAGTTGAAGAAAAACCTTCTTCCACTCTCAATGTCCCTCACGCCAGCAGGGAGATTGTTCAAGATCGTACATCCGAGAGAAAGGAAACTGTTAATGGTAACTTGATGGGTAGCTCAGCCGGAAGTAATAGCAAATACGCTGAGACTGCTTCTTTAGGCAATCATGTTGATAGAAATAGCTCGGAGAAAGGACCTTTACTGGATAGGAAATTCAAAACACCCTCAAGGCGGCACCGAAGTTCGAGCAGCAGCTCATCATCAGAAGATGAGAGCAGTAGAAAACGCTCCAGGCGACATCGACATAGACATAGACACAGCGATTCAGATAGTGATTCATCCGGTGATCAACGAGACCGATACCATTCTAGGTCTAAAGGGAAAAAGAAAGGATCCTCACGAGAAAAGAGCAGTAGTAGCAGAAGTCACTCAAAACATAAGCGTAGAAGCAGAGACTCCCCCAGTAGATATGATTATTCCCCTGAGAAGGAACGCTCAGAAACCAAGAGAGACAAGCACAGGAGGAGGGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000375 GO:0000377 GO:0000398 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005681 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009888 GO:0009892 GO:0009987 GO:0010033 GO:0010087 GO:0010467 GO:0010468 GO:0010605 GO:0010608 GO:0010629 GO:0014070 GO:0016070 GO:0016071 GO:0016246 GO:0016441 GO:0016458 GO:0019222 GO:0030422 GO:0031047 GO:0031050 GO:0032502 GO:0032991 GO:0034641 GO:0035194 GO:0035195 GO:0035196 GO:0040029 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043331 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0048519 GO:0048856 GO:0050789 GO:0050896 GO:0051716 GO:0060255 GO:0065007 GO:0070878 GO:0070883 GO:0070887 GO:0070918 GO:0071013 GO:0071310 GO:0071359 GO:0071407 GO:0071704 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1901698 GO:1901699 GO:1902494 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF1604 Surp

Protein Analysis

994

Amino Acids

111.15

Weight (kDa)

6.37

Isoelectric Point (pI)

60.56

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Surp	PF01805	304 - 351	1.9e-11	Surp module
HTH_TGH	PF26093	410 - 486	3.6e-19	TGH-like, helix-turn-helix domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0012025)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G23080 AT5G23080
fragaria_vesca	FvH4_5g12911 FvH4_5g12911
malus_domestica	MD06G1209200.v1.1 MD14G1219700.v1.1
prunus_persica	Prupe.5G214300_v2.0.a1
pyrus_communis	pycom06g18680 pycom14g18200
rosa_chinensis	RchiOBHm_Chr7g0184311
rosa_laevigata	RLG00000004987
rosa_multiflora	Rmu_co8385771.1_g000001 Rmu_co8404991.1_g000001
rosa_roxburghii	Rroxscaffold_3G00269740
rosa_samantha	Rh7AG081200 Rh7BG066100 Rh7CG066400 Rh7DG066100
rosa_wichuraiana	Rw7G005420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2303
AasI	GACNNNNNNGTC	1 cut(s)	250
AatII	GACGTC	1 cut(s)	63
Acc16I	TGCGCA	1 cut(s)	113
Acc36I	ACCTGC	1 cut(s)	2303
AccB1I	GGYRCC	2 cut(s)	519, 2682
AccII	CGCG	1 cut(s)	51
AciI	CCGC	4 cut(s)	183, 1272, 2360, 2680
AclI	AACGTT	1 cut(s)	2175
AcsI	RAATTY	6 cut(s)	1081, 1148, 1832, 2395, 2436, 2660
AcuI	CTGAAG	6 cut(s)	294, 527, 875, 954, 1535, 1896
AcvI	CACGTG	1 cut(s)	809
AcyI	GRCGYC	3 cut(s)	60, 520, 1927
AfaI	GTAC	7 cut(s)	468, 726, 1137, 1519, 1556, 1676, 2521
AfiI	CCNNNNNNNGG	7 cut(s)	72, 739, 902, 1976, 2200, 2679, 2935
AflIII	ACRYGT	1 cut(s)	808
AjnI	CCWGG	6 cut(s)	442, 829, 895, 1048, 1189, 2738
AjuI	GAANNNNNNNTTGG	2 cut(s)	1671, 1703
Alw21I	GWGCWC	3 cut(s)	916, 1057, 1741
Alw26I	GTCTC	8 cut(s)	968, 1160, 1437, 2079, 2588, 2796, 2895, 2952
AlwNI	CAGNNNCTG	1 cut(s)	1663
Ama87I	CYCGRG	2 cut(s)	1513, 2363
AoxI	GGCC	7 cut(s)	428, 826, 1157, 1193, 1487, 2183, 2347
ApaI	GGGCCC	2 cut(s)	830, 1197
ApoI	RAATTY	6 cut(s)	1081, 1148, 1832, 2395, 2436, 2660
AspLEI	GCGC	2 cut(s)	114, 522
AspS9I	GGNCC	7 cut(s)	446, 826, 827, 1157, 1193, 1194, 2642
AsuC2I	CCSGG	1 cut(s)	1199
AsuHPI	GGTGA	5 cut(s)	55, 1926, 2168, 2327, 2804
AvaI	CYCGRG	2 cut(s)	1513, 2363
AvaII	GGWCC	2 cut(s)	446, 2642
AxyI	CCTNAGG	1 cut(s)	1215
BaeGI	GKGCMC	2 cut(s)	830, 1197
BamHI	GGATCC	1 cut(s)	2840
BanI	GGYRCC	2 cut(s)	519, 2682
BanII	GRGCYC	4 cut(s)	221, 830, 1197, 2115
BauI	CACGAG	2 cut(s)	1734, 2847
BbrPI	CACGTG	1 cut(s)	809
BbsI	GAAGAC	3 cut(s)	24, 246, 927
Bbv12I	GWGCWC	3 cut(s)	916, 1057, 1741
BccI	CCATC	7 cut(s)	439, 505, 510, 1238, 1415, 1822, 2551
BciT130I	CCWGG	6 cut(s)	444, 831, 897, 1050, 1191, 2740
BciVI	GTATCC	1 cut(s)	194
BclI	TGATCA	2 cut(s)	1011, 2794
BcnI	CCSGG	1 cut(s)	1199
BcoDI	GTCTC	8 cut(s)	968, 1160, 1437, 2079, 2588, 2796, 2895, 2952
BfaI	CTAG	5 cut(s)	396, 1170, 1713, 2351, 2817
BfmI	CTRYAG	3 cut(s)	384, 486, 1116
BfoI	RGCGCY	1 cut(s)	523
BfuAI	ACCTGC	1 cut(s)	2303
BfuI	GTATCC	1 cut(s)	194
BlpI	GCTNAGC	1 cut(s)	2566
Bme1390I	CCNGG	7 cut(s)	444, 831, 897, 1050, 1191, 1199, 2740
Bme18I	GGWCC	2 cut(s)	446, 2642
BmeT110I	CYCGRG	2 cut(s)	1513, 2363
BmgT120I	GGNCC	7 cut(s)	446, 826, 827, 1157, 1193, 1194, 2642
BmrFI	CCNGG	7 cut(s)	444, 831, 897, 1050, 1191, 1199, 2740
BmrI	ACTGGG	2 cut(s)	2447, 2904
BmsI	GCATC	8 cut(s)	556, 604, 919, 1085, 1259, 1528, 1621, 1870
BmuI	ACTGGG	2 cut(s)	2447, 2904
BpiI	GAAGAC	3 cut(s)	24, 246, 927
BplI	GAGNNNNNCTC	6 cut(s)	1277, 1309, 1487, 1519, 2225, 2257
BpmI	CTGGAG	2 cut(s)	1842, 2722
Bpu10I	CCTNAGC	1 cut(s)	2109
Bpu1102I	GCTNAGC	1 cut(s)	2566
BpuEI	CTTGAG	4 cut(s)	1279, 1763, 1854, 2659
BpuMI	CCSGG	1 cut(s)	1199
BsaAI	YACGTR	1 cut(s)	809
BsaBI	GATNNNNATC	1 cut(s)	1224
BsaHI	GRCGYC	3 cut(s)	60, 520, 1927
BsaI	GGTCTC	1 cut(s)	2796
BsaJI	CCNNGG	8 cut(s)	125, 523, 829, 1190, 1197, 1678, 1770, 2116
BsaWI	WCCGGW	3 cut(s)	101, 1703, 2789
BsaXI	ACNNNNNCTCC	2 cut(s)	106, 136
Bsc4I	CCNNNNNNNGG	7 cut(s)	72, 739, 902, 1976, 2200, 2679, 2935
Bse1I	ACTGG	5 cut(s)	1604, 1825, 2453, 2655, 2910
Bse21I	CCTNAGG	1 cut(s)	1215
Bse8I	GATNNNNATC	1 cut(s)	1224
BseBI	CCWGG	6 cut(s)	444, 831, 897, 1050, 1191, 2740
BseDI	CCNNGG	8 cut(s)	125, 523, 829, 1190, 1197, 1678, 1770, 2116
BseGI	GGATG	8 cut(s)	61, 313, 521, 949, 1833, 2033, 2522, 2786
BseJI	GATNNNNATC	1 cut(s)	1224
BseLI	CCNNNNNNNGG	7 cut(s)	72, 739, 902, 1976, 2200, 2679, 2935
BseMII	CTCAG	8 cut(s)	774, 1155, 1229, 2100, 2580, 2583, 2922, 2958
BseNI	ACTGG	5 cut(s)	1604, 1825, 2453, 2655, 2910
BseRI	GAGGAG	7 cut(s)	986, 1200, 1203, 1394, 1410, 2246, 2394
BseSI	GKGCMC	2 cut(s)	830, 1197
BsgI	GTGCAG	1 cut(s)	1649
Bsh1236I	CGCG	1 cut(s)	51
BshFI	GGCC	7 cut(s)	430, 828, 1159, 1195, 1489, 2185, 2349
BshNI	GGYRCC	2 cut(s)	519, 2682
BsiHKAI	GWGCWC	3 cut(s)	916, 1057, 1741
BsiHKCI	CYCGRG	2 cut(s)	1513, 2363
BsiSI	CCGG	6 cut(s)	73, 102, 1199, 1704, 2571, 2790
BslFI	GGGAC	4 cut(s)	361, 1190, 1914, 2471
BslI	CCNNNNNNNGG	7 cut(s)	72, 739, 902, 1976, 2200, 2679, 2935
BsmAI	GTCTC	8 cut(s)	968, 1160, 1437, 2079, 2588, 2796, 2895, 2952
BsmFI	GGGAC	4 cut(s)	361, 1190, 1914, 2471
BsnI	GGCC	7 cut(s)	430, 828, 1159, 1195, 1489, 2185, 2349
Bso31I	GGTCTC	1 cut(s)	2796
BsoBI	CYCGRG	2 cut(s)	1513, 2363
Bsp120I	GGGCCC	2 cut(s)	826, 1193
Bsp1286I	GDGCHC	7 cut(s)	221, 830, 916, 1057, 1197, 1741, 2115
Bsp1720I	GCTNAGC	1 cut(s)	2566
Bsp19I	CCATGG	1 cut(s)	523
Bsp68I	TCGCGA	1 cut(s)	51
BspACI	CCGC	4 cut(s)	183, 1272, 2360, 2680
BspANI	GGCC	7 cut(s)	430, 828, 1159, 1195, 1489, 2185, 2349
BspCNI	CTCAG	8 cut(s)	775, 1156, 1228, 2101, 2579, 2584, 2923, 2957
BspFNI	CGCG	1 cut(s)	51
BspHI	TCATGA	2 cut(s)	649, 1351
BspMAI	CTGCAG	1 cut(s)	388
BspMI	ACCTGC	1 cut(s)	2303
BspT107I	GGYRCC	2 cut(s)	519, 2682
BspTNI	GGTCTC	1 cut(s)	2796
BsrI	ACTGG	5 cut(s)	1604, 1825, 2453, 2655, 2910
BssECI	CCNNGG	8 cut(s)	125, 523, 829, 1190, 1197, 1678, 1770, 2116
BssNI	GRCGYC	3 cut(s)	60, 520, 1927
BssSI	CACGAG	2 cut(s)	1734, 2847
BssT1I	CCWWGG	4 cut(s)	125, 523, 1678, 2116
Bst2BI	CACGAG	2 cut(s)	1734, 2847
Bst2UI	CCWGG	6 cut(s)	444, 831, 897, 1050, 1191, 2740
Bst4CI	ACNGT	3 cut(s)	214, 2303, 2542
Bst6I	CTCTTC	1 cut(s)	1385
BstACI	GRCGYC	3 cut(s)	60, 520, 1927
BstAPI	GCANNNNNTGC	5 cut(s)	566, 605, 745, 1663, 1736
BstBAI	YACGTR	1 cut(s)	809
BstC8I	GCNNGC	6 cut(s)	49, 630, 681, 777, 1857, 2497
BstDSI	CCRYGG	1 cut(s)	523
BstENI	CCTNNNNNAGG	1 cut(s)	2198
BstF5I	GGATG	8 cut(s)	61, 313, 521, 949, 1833, 2033, 2522, 2786
BstFNI	CGCG	1 cut(s)	51
BstH2I	RGCGCY	1 cut(s)	523
BstHHI	GCGC	2 cut(s)	114, 522
BstMAI	GTCTC	8 cut(s)	968, 1160, 1437, 2079, 2588, 2796, 2895, 2952
BstNI	CCWGG	6 cut(s)	444, 831, 897, 1050, 1191, 2740
BstNSI	RCATGY	4 cut(s)	407, 551, 683, 779
BstSCI	CCNGG	7 cut(s)	442, 829, 895, 1048, 1189, 1197, 2738
BstSFI	CTRYAG	3 cut(s)	384, 486, 1116
BstSLI	GKGCMC	2 cut(s)	830, 1197
BstUI	CGCG	1 cut(s)	51
BstV2I	GAAGAC	3 cut(s)	24, 246, 927
BstX2I	RGATCY	3 cut(s)	1186, 1288, 2840
BstYI	RGATCY	3 cut(s)	1186, 1288, 2840
Bsu36I	CCTNAGG	1 cut(s)	1215
BsuI	GTATCC	1 cut(s)	194
BsuRI	GGCC	7 cut(s)	430, 828, 1159, 1195, 1489, 2185, 2349
BtgI	CCRYGG	1 cut(s)	523
BtsCI	GGATG	8 cut(s)	61, 313, 521, 949, 1833, 2033, 2522, 2786
BtsIMutI	CAGTG	2 cut(s)	219, 1533
BtuMI	TCGCGA	1 cut(s)	51
BveI	ACCTGC	1 cut(s)	2303
Cac8I	GCNNGC	6 cut(s)	49, 630, 681, 777, 1857, 2497
CaiI	CAGNNNCTG	1 cut(s)	1663
CciI	TCATGA	2 cut(s)	649, 1351
CfoI	GCGC	2 cut(s)	114, 522
Cfr13I	GGNCC	7 cut(s)	446, 826, 827, 1157, 1193, 1194, 2642
CseI	GACGC	1 cut(s)	1916
CsiI	ACCWGGT	1 cut(s)	1048
Csp6I	GTAC	7 cut(s)	467, 725, 1136, 1518, 1555, 1675, 2520
CviQI	GTAC	7 cut(s)	467, 725, 1136, 1518, 1555, 1675, 2520
DinI	GGCGCC	1 cut(s)	521
DrdI	GACNNNNNNGTC	1 cut(s)	250
DseDI	GACNNNNNNGTC	1 cut(s)	250
Eam1104I	CTCTTC	1 cut(s)	1385
EarI	CTCTTC	1 cut(s)	1385
EciI	GGCGGA	1 cut(s)	2349
Eco130I	CCWWGG	4 cut(s)	125, 523, 1678, 2116
Eco147I	AGGCCT	2 cut(s)	1489, 2185
Eco24I	GRGCYC	4 cut(s)	221, 830, 1197, 2115
Eco31I	GGTCTC	1 cut(s)	2796
Eco32I	GATATC	2 cut(s)	1806, 2239
Eco47I	GGWCC	2 cut(s)	446, 2642
Eco57I	CTGAAG	6 cut(s)	294, 527, 875, 954, 1535, 1896
Eco72I	CACGTG	1 cut(s)	809
Eco81I	CCTNAGG	1 cut(s)	1215
Eco88I	CYCGRG	2 cut(s)	1513, 2363
EcoNI	CCTNNNNNAGG	1 cut(s)	2198
EcoO109I	RGGNCCY	4 cut(s)	826, 827, 1194, 2642
EcoRI	GAATTC	1 cut(s)	2395
EcoRII	CCWGG	6 cut(s)	442, 829, 895, 1048, 1189, 2738
EcoRV	GATATC	2 cut(s)	1806, 2239
EcoT14I	CCWWGG	4 cut(s)	125, 523, 1678, 2116
EcoT22I	ATGCAT	1 cut(s)	750
EcoT38I	GRGCYC	4 cut(s)	221, 830, 1197, 2115
EgeI	GGCGCC	1 cut(s)	521
EheI	GGCGCC	1 cut(s)	521
ErhI	CCWWGG	4 cut(s)	125, 523, 1678, 2116
FalI	AAGNNNNNCTT	4 cut(s)	1671, 1703, 2192, 2224
FaqI	GGGAC	4 cut(s)	361, 1190, 1914, 2471
FauNDI	CATATG	2 cut(s)	562, 1719
FbaI	TGATCA	2 cut(s)	1011, 2794
FokI	GGATG	8 cut(s)	68, 320, 528, 956, 1840, 2020, 2509, 2773
FriOI	GRGCYC	4 cut(s)	221, 830, 1197, 2115
FspBI	CTAG	5 cut(s)	396, 1170, 1713, 2351, 2817
FspI	TGCGCA	1 cut(s)	113
GlaI	GCGC	2 cut(s)	113, 521
GsuI	CTGGAG	2 cut(s)	1842, 2722
HaeII	RGCGCY	1 cut(s)	523
HaeIII	GGCC	7 cut(s)	430, 828, 1159, 1195, 1489, 2185, 2349
HapII	CCGG	6 cut(s)	73, 102, 1199, 1704, 2571, 2790
HgaI	GACGC	1 cut(s)	1916
HhaI	GCGC	2 cut(s)	114, 522
Hin1I	GRCGYC	3 cut(s)	60, 520, 1927
Hin6I	GCGC	2 cut(s)	112, 520
HinP1I	GCGC	2 cut(s)	112, 520
HincII	GTYRAC	1 cut(s)	2191
HindII	GTYRAC	1 cut(s)	2191
HindIII	AAGCTT	2 cut(s)	588, 1178
HpaII	CCGG	6 cut(s)	73, 102, 1199, 1704, 2571, 2790
HphI	GGTGA	5 cut(s)	55, 1926, 2168, 2327, 2804
Hpy166II	GTNNAC	1 cut(s)	2191
Hpy8I	GTNNAC	1 cut(s)	2191
Hpy99I	CGWCG	1 cut(s)	92
HpyAV	CCTTC	9 cut(s)	146, 326, 567, 572, 1630, 2266, 2382, 2478, 2929
HpyCH4III	ACNGT	3 cut(s)	214, 2303, 2542
HpyCH4IV	ACGT	5 cut(s)	60, 808, 1031, 2133, 2175
HpySE526I	ACGT	5 cut(s)	60, 808, 1031, 2133, 2175
Hsp92I	GRCGYC	3 cut(s)	60, 520, 1927
HspAI	GCGC	2 cut(s)	112, 520
KasI	GGCGCC	1 cut(s)	519
Ksp22I	TGATCA	2 cut(s)	1011, 2794
LweI	GCATC	8 cut(s)	556, 604, 919, 1085, 1259, 1528, 1621, 1870
MabI	ACCWGGT	1 cut(s)	1048
MaeI	CTAG	5 cut(s)	396, 1170, 1713, 2351, 2817
MaeII	ACGT	5 cut(s)	60, 808, 1031, 2133, 2175
MaeIII	GTNAC	5 cut(s)	61, 804, 2315, 2549, 2873
MflI	RGATCY	3 cut(s)	1186, 1288, 2840
MhlI	GDGCHC	7 cut(s)	221, 830, 916, 1057, 1197, 1741, 2115
Mly113I	GGCGCC	1 cut(s)	520
MlyI	GAGTC	5 cut(s)	629, 1505, 1709, 2081, 2897
MmeI	TCCRAC	2 cut(s)	212, 1318
Mph1103I	ATGCAT	1 cut(s)	750
MseI	TTAA	6 cut(s)	537, 771, 1238, 2259, 2297, 2544
MslI	CAYNNNNRTG	2 cut(s)	552, 684
MspA1I	CMGCKG	3 cut(s)	109, 383, 628
MspI	CCGG	6 cut(s)	73, 102, 1199, 1704, 2571, 2790
MspR9I	CCNGG	7 cut(s)	444, 831, 897, 1050, 1191, 1199, 2740
MvaI	CCWGG	6 cut(s)	444, 831, 897, 1050, 1191, 2740
MvnI	CGCG	1 cut(s)	51
NarI	GGCGCC	1 cut(s)	520
NciI	CCSGG	1 cut(s)	1199
NcoI	CCATGG	1 cut(s)	523
NdeI	CATATG	2 cut(s)	562, 1719
NmeAIII	GCCGAG	1 cut(s)	1795
NmuCI	GTSAC	4 cut(s)	61, 804, 2315, 2873
NruI	TCGCGA	1 cut(s)	51
NsbI	TGCGCA	1 cut(s)	113
NsiI	ATGCAT	1 cut(s)	750
NspI	RCATGY	4 cut(s)	407, 551, 683, 779
PaeI	GCATGC	2 cut(s)	683, 779
PaeR7I	CTCGAG	1 cut(s)	1513
PagI	TCATGA	2 cut(s)	649, 1351
PaqCI	CACCTGC	1 cut(s)	2303
PceI	AGGCCT	2 cut(s)	1489, 2185
PcsI	WCGNNNNNNNCGW	2 cut(s)	2139, 2740
PfeI	GAWTC	7 cut(s)	482, 542, 2039, 2219, 2327, 2771, 2783
PfoI	TCCNGGA	1 cut(s)	442
PleI	GAGTC	5 cut(s)	629, 1505, 1708, 2081, 2897
PluTI	GGCGCC	1 cut(s)	523
PmaCI	CACGTG	1 cut(s)	809
PmlI	CACGTG	1 cut(s)	809
PpsI	GAGTC	5 cut(s)	629, 1505, 1708, 2081, 2897
Ppu21I	YACGTR	1 cut(s)	809
PpuMI	RGGWCCY	1 cut(s)	2642
Psp1406I	AACGTT	1 cut(s)	2175
Psp5II	RGGWCCY	1 cut(s)	2642
Psp6I	CCWGG	6 cut(s)	442, 829, 895, 1048, 1189, 2738
PspCI	CACGTG	1 cut(s)	809
PspGI	CCWGG	6 cut(s)	442, 829, 895, 1048, 1189, 2738
PspOMI	GGGCCC	2 cut(s)	826, 1193
PspPI	GGNCC	7 cut(s)	446, 826, 827, 1157, 1193, 1194, 2642
PspPPI	RGGWCCY	1 cut(s)	2642
PspXI	VCTCGAGB	1 cut(s)	1513
PstI	CTGCAG	1 cut(s)	388
PstNI	CAGNNNCTG	1 cut(s)	1663
PsuI	RGATCY	3 cut(s)	1186, 1288, 2840
PvuII	CAGCTG	3 cut(s)	109, 383, 628
RruI	TCGCGA	1 cut(s)	51
RsaI	GTAC	7 cut(s)	468, 726, 1137, 1519, 1556, 1676, 2521
RsaNI	GTAC	7 cut(s)	467, 725, 1136, 1518, 1555, 1675, 2520
RseI	CAYNNNNRTG	2 cut(s)	552, 684
SaqAI	TTAA	6 cut(s)	537, 771, 1238, 2259, 2297, 2544
Sau96I	GGNCC	7 cut(s)	446, 826, 827, 1157, 1193, 1194, 2642
SchI	GAGTC	5 cut(s)	629, 1505, 1709, 2081, 2897
ScrFI	CCNGG	7 cut(s)	444, 831, 897, 1050, 1191, 1199, 2740
SduI	GDGCHC	7 cut(s)	221, 830, 916, 1057, 1197, 1741, 2115
SexAI	ACCWGGT	1 cut(s)	1048
SfaNI	GCATC	8 cut(s)	556, 604, 919, 1085, 1259, 1528, 1621, 1870
SfcI	CTRYAG	3 cut(s)	384, 486, 1116
SfoI	GGCGCC	1 cut(s)	521
Sfr274I	CTCGAG	1 cut(s)	1513
SinI	GGWCC	2 cut(s)	446, 2642
SlaI	CTCGAG	1 cut(s)	1513
SmiMI	CAYNNNNRTG	2 cut(s)	552, 684
SmlI	CTYRAG	5 cut(s)	1294, 1513, 1742, 1869, 2674
SmoI	CTYRAG	5 cut(s)	1294, 1513, 1742, 1869, 2674
SphI	GCATGC	2 cut(s)	683, 779
SseBI	AGGCCT	2 cut(s)	1489, 2185
SsiI	CCGC	4 cut(s)	183, 1272, 2360, 2680
SspDI	GGCGCC	1 cut(s)	519
SspMI	CTAG	5 cut(s)	396, 1170, 1713, 2351, 2817
StuI	AGGCCT	2 cut(s)	1489, 2185
StyD4I	CCNGG	7 cut(s)	442, 829, 895, 1048, 1189, 1197, 2738
StyI	CCWWGG	4 cut(s)	125, 523, 1678, 2116
TaaI	ACNGT	3 cut(s)	214, 2303, 2542
TaiI	ACGT	5 cut(s)	63, 811, 1034, 2136, 2178
TaqI	TCGA	9 cut(s)	221, 571, 697, 1267, 1514, 1690, 2016, 2693, 2749
TaqII	GACCGA	1 cut(s)	2820
TatI	WGTACW	3 cut(s)	724, 1517, 1554
TauI	GCSGC	2 cut(s)	1275, 2683
TfiI	GAWTC	7 cut(s)	482, 542, 2039, 2219, 2327, 2771, 2783
Tru1I	TTAA	6 cut(s)	537, 771, 1238, 2259, 2297, 2544
Tru9I	TTAA	6 cut(s)	537, 771, 1238, 2259, 2297, 2544
TscAI	CASTG	2 cut(s)	219, 1540
TseFI	GTSAC	4 cut(s)	61, 804, 2315, 2873
Tsp45I	GTSAC	4 cut(s)	61, 804, 2315, 2873
TspGWI	ACGGA	3 cut(s)	48, 76, 186
TspRI	CASTG	2 cut(s)	219, 1540
VpaK11BI	GGWCC	2 cut(s)	446, 2642
XagI	CCTNNNNNAGG	1 cut(s)	2198
XapI	RAATTY	6 cut(s)	1081, 1148, 1832, 2395, 2436, 2660
XceI	RCATGY	4 cut(s)	407, 551, 683, 779
XhoI	CTCGAG	1 cut(s)	1513
XspI	CTAG	5 cut(s)	396, 1170, 1713, 2351, 2817
ZraI	GACGTC	1 cut(s)	61
Zsp2I	ATGCAT	1 cut(s)	750

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.