Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr06

Orthogroup ID

OG0012025

Physical Location & Seq

Genomic Coordinates Reverse (-)

34264492 .. 34272181

Gene Structure 7690 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD06G1209200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2970 bp

ATGGCTTCGGACGAAGACGATTTCGTTTTCTACGGAACACCGATAGAGCGCGAGGAAGATTTCACCAGTCGCAAGAAGAAGTCCGTCGCCGAGGCCTCCGGTAACTTGCGCACTGTCGTTCCTTGGAAGCAAGAGGTTAGAGATGAAGAAGGGAGAAGGAGATTTCATGGTGCATTTAGTGGAGGGTTTTCTGCCGGCTATTACAATACAGTTGGCTCAAAAGAGGGGTGGACACCACAGACTTTTGTGTCATCGCGGAAGAACAGAGCTGAAGTCAAAGCGCAGGACATTACAAACTTTTTAGATGAAGATGAAAGAGCTGAGCTTGAAGGCCAATCTTTGGGGACATCCATGCAGTTTGATACATTTGGATCTACAGCTGCTGAACTTGCTCGTAAACAAGCTGAGAAGGAACAACAGAAAAGGCCGTCAGCTATTCCTGGACCTGTTCCTGATGAATTAGTTCTTCCAGCCACAGATTCTATAGGTGTAAAATTGCTGCTGAAGATGGGATGGCGTCATGGTCGTTCAATCAAGGATTCACATACTGATTTATCATATGATGCTCGAAGGGAAGCTCGAAAAGCTTTTTTAGCATTTTCTTCCAGTGATGCAAAAACACAGCTGGCTGACTCTGAGCCCGTTCATGGCGAACTGGACAATCATATTGAGCTGCCTGCCGTTGATGATGTTCAATCTTCTCAAAGCACACCTGTTTATGTACTCTACCCAAAGCAGGACCTTCATGGATTAGGTTTTGATCCTTATAAGCATGCTCCTGAGTTTAGGGATAAGAAGAGATCGCGCCCATCTGAGAATAGGGGTATTGGATATAGAAGTGCCCGTTCAATGGACAATAATCTTTTCGGCTTCAAGTCAGGAAAGGTTGCTCCTGGTTTTGGAATTGGAGCACTTGAAGAACTTGATGCTGAAGATGAGGATGTTTATAACTCGGGTTACGACTTTGAGGAAATTTATGTTGAAGATATTGACGATGAGCCTTCAAGATCAATCATGGATAGCAAGCAAAAGTTGGTTCGAAAGGAACCAGGTGGTCTCGCTGGATTTAGACTTGCATCTAACTCAGACTACCAGCATGAGAGATTTGATCCTCCTGTAGTACCAAAAGATTTTGTACCCCACCATAAATTTTCTCAGCCTCTTGATACGGGCTACAAGCTTGGAGATCCTGGTCCCCCAGAAGTATCTCCTCCCGAAGATAATAATCTGAAACTCTTAATTGACGGGGTCGCAACTTTAGTAGCTCGATGTGGTAAATTATTTGAGGATCTCTCCAGAGAGAAAAATCAGTCAAATCCCTTGTTTAGGTTTCTAGTTGGAGGGAATGGCCATGATTATTATGCAAGGAAACTGTGGGAGGAGCGACAGAAGCGAGGCAATCACACCAAGGAGATATTGGATGGTAAATTGTCTCCACGAAAGCAGAAAATGACAGCAGAGAACCGTGGAAAAATTTTAGGGGAAAGGCCATTGGAACGAAGCTCCAAAGAGTCAAATTCATCTGTTGCTTCTAAAGATGCCATTCAGCTTCAGTACAATCTATCAGATACTTTTACTAAACCTGCATTAGATGGCGAGATGCTGGAAGTTGCAAAACCTTTCAATGATGATCCTGCAAAGCAAGAAAGGTTTGAGCGGTTTCTCAAGGAGAAGTATCAAGGAGGACTTCGATCTACTGAGTCTGGCGGAGCGAGTCATATGTCAGAAGCAGTTCGTGCTCGTGAGAGATTGGACTTTGAGGCTGCAGCCGATGCAATACAGAAAGGGAAATGGAGTAAAGAAAGCAAACTCTCCACATCACAGTTCATGGATTTTTTATCTGCTGGAGCCATGCAGTTTACTTCTGGGGGATCAGCGCAAGCCAAAGACACTCAAGCTGAAAAATCGATAAAAAAGGAAGTTTGCATAAAACGGACAGAATATCAGTGGCGTCCTTCACCTATTTTATGCAAACGCTTTGATCTCATCGATCCTTTCATGGGGAAGCCACCACCAGCTCCACGGATGAAGAGCAAAATGGAAACTCTGATTTTTACATCAGATTCTGGAAAAGACACAAAAGCAGAAGAAACTGTAATTGTAAAGAGAGACTACATCCCTGCTGTTCAATCTTATGCCCGAGGAATAAGCAAAGATGTAGTTGACGAGGAAAGCACAATTGATGTTGAAGTTGAAAACGTTGAGAGGCCAGTTGACCTTTACAAGGCTATATTTTCTGATGATGAGGATGATGATGAGGATGCCTCTATTCCCAAAGGGGTCGGTAAGCCAGAGAAGAAGGTTGAAGCAGCTAATACAACATTAAACCGTTTGATCGCAGGTGACTTTTTGGAATCCTTAGGAAAAGAACTAGGCCTAGAGGTTCCCCCTGAGCTGACCTCATCAACGAACAAAGCCAGGACTTTGCCTCCCAAAGGAGCTGGTTCAGGGCATTCCAGTATCCTGCCAGTTGATAATAAGCCACCTTCCACTCGCGATATTTCACACAGACCAGAAAGTTCTCAAGATGCTCCACGTGACAATACTGAGCCTTTGAATGGTAACTTGACGGGTAATTCAGCGAGAAGTAATAGCAAAAACGCAGAGAAGGATGCTTCGGGGAATCAGTTTGACAAGATTATTTTTCAAAAAGCACCTCAAGAAGATAGGAAGGAGAAAACACCCTCAAGGCGGCACCAGAATGTGAGCAACAGTTCACCATCAGAAGATGAAAGGAGCAGAAAGCGCTCTAGGAGACATCGGCATAGATACAGTGATTCAGATAGCGATTCATCCAGCGATCATTGGGACCGTCACCGTTCTAGGTCCAAAGGGAAGAAGAAAGGATCCTCTCGAGAAAAGAGCAGTAGTAGCAGAAAACACTCGAAGCATCATAAACGTCGAAGCAGAGACTCCCCCGAGAAGGAACGTTCAGAATCCAGGAGAGACAAGCACAGAAGGCGAGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000375 GO:0000377 GO:0000398 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005681 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009888 GO:0009892 GO:0009987 GO:0010033 GO:0010087 GO:0010467 GO:0010468 GO:0010605 GO:0010608 GO:0010629 GO:0014070 GO:0016070 GO:0016071 GO:0016246 GO:0016441 GO:0016458 GO:0019222 GO:0030422 GO:0031047 GO:0031050 GO:0032502 GO:0032991 GO:0034641 GO:0035194 GO:0035195 GO:0035196 GO:0040029 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043331 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0048519 GO:0048856 GO:0050789 GO:0050896 GO:0051716 GO:0060255 GO:0065007 GO:0070878 GO:0070883 GO:0070887 GO:0070918 GO:0071013 GO:0071310 GO:0071359 GO:0071407 GO:0071704 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1901698 GO:1901699 GO:1902494 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF1604 Surp

Protein Analysis

990

Amino Acids

111.13

Weight (kDa)

7.39

Isoelectric Point (pI)

57.86

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF1604	PF07713	40 - 118	2.8e-35	Protein of unknown function (DUF1604)
Surp	PF01805	413 - 460	5.7e-11	Surp module
HTH_TGH	PF26093	519 - 595	6.1e-22	TGH-like, helix-turn-helix domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0012025)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G23080 AT5G23080
fragaria_vesca	FvH4_5g12911 FvH4_5g12911
malus_domestica	MD06G1209200.v1.1 MD14G1219700.v1.1
prunus_persica	Prupe.5G214300_v2.0.a1
pyrus_communis	pycom06g18680 pycom14g18200
rosa_chinensis	RchiOBHm_Chr7g0184311
rosa_laevigata	RLG00000004987
rosa_multiflora	Rmu_co8385771.1_g000001 Rmu_co8404991.1_g000001
rosa_roxburghii	Rroxscaffold_3G00269740
rosa_samantha	Rh7AG081200 Rh7BG066100 Rh7CG066400 Rh7DG066100
rosa_wichuraiana	Rw7G005420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	768, 948
AarI	CACCTGC	1 cut(s)	2330
AasI	GACNNNNNNGTC	1 cut(s)	247
Acc16I	TGCGCA	1 cut(s)	110
Acc36I	ACCTGC	2 cut(s)	1591, 2330
AccB1I	GGYRCC	1 cut(s)	2694
AccB7I	CCANNNNNTGG	1 cut(s)	340
AccBSI	CCGCTC	1 cut(s)	1657
AccII	CGCG	4 cut(s)	51, 256, 805, 2496
AciI	CCGC	4 cut(s)	256, 1657, 1707, 2692
AclI	AACGTT	2 cut(s)	2199, 2929
AcoI	YGGCCR	1 cut(s)	1348
AcsI	RAATTY	4 cut(s)	972, 1148, 1473, 1516
AcuI	CTGAAG	4 cut(s)	291, 524, 951, 1535
AcvI	CACGTG	1 cut(s)	2537
AcyI	GRCGYC	2 cut(s)	517, 1951
AfaI	GTAC	4 cut(s)	723, 1122, 1137, 1556
AfeI	AGCGCT	1 cut(s)	2747
AjnI	CCWGG	6 cut(s)	439, 892, 1048, 1189, 2417, 2939
Alw21I	GWGCWC	2 cut(s)	913, 1741
Alw26I	GTCTC	6 cut(s)	1061, 1437, 2103, 2749, 2904, 2940
AlwNI	CAGNNNCTG	2 cut(s)	383, 2066
Ama87I	CYCGRG	4 cut(s)	952, 2139, 2853, 2918
Aor51HI	AGCGCT	1 cut(s)	2747
AoxI	GGCC	7 cut(s)	93, 331, 425, 1348, 1487, 2207, 2374
ApeKI	GCWGC	6 cut(s)	380, 499, 673, 1763, 1766, 2309
ApoI	RAATTY	4 cut(s)	972, 1148, 1473, 1516
Asp700I	GAANNNNTTC	2 cut(s)	462, 1731
AspLEI	GCGC	6 cut(s)	51, 111, 283, 807, 1879, 2748
AspS9I	GGNCC	5 cut(s)	443, 739, 1193, 2809, 2826
AsuHPI	GGTGA	5 cut(s)	55, 1950, 2354, 2709, 2807
AsuII	TTCGAA	1 cut(s)	1039
AvaI	CYCGRG	4 cut(s)	952, 2139, 2853, 2918
AvaII	GGWCC	5 cut(s)	443, 739, 1193, 2809, 2826
AxyI	CCTNAGG	1 cut(s)	2359
BaeGI	GKGCMC	1 cut(s)	844
BalI	TGGCCA	1 cut(s)	1350
BamHI	GGATCC	1 cut(s)	2846
BanI	GGYRCC	1 cut(s)	2694
BanII	GRGCYC	1 cut(s)	642
BauI	CACGAG	1 cut(s)	1740
BbrPI	CACGTG	1 cut(s)	2537
BbsI	GAAGAC	1 cut(s)	21
Bbv12I	GWGCWC	2 cut(s)	913, 1741
BbvI	GCAGC	6 cut(s)	367, 486, 660, 1750, 1778, 2321
BccI	CCATC	6 cut(s)	502, 507, 817, 1415, 1586, 2728
BceAI	ACGGC	2 cut(s)	412, 665
BciT130I	CCWGG	6 cut(s)	441, 894, 1050, 1191, 2419, 2941
BciVI	GTATCC	1 cut(s)	2471
BcoDI	GTCTC	6 cut(s)	1061, 1437, 2103, 2749, 2904, 2940
BfaI	CTAG	5 cut(s)	1334, 2372, 2378, 2751, 2823
BfmI	CTRYAG	4 cut(s)	375, 483, 1116, 1764
BfoI	RGCGCY	1 cut(s)	2749
BfuAI	ACCTGC	2 cut(s)	1591, 2330
BfuI	GTATCC	1 cut(s)	2471
BisI	GCNGC	7 cut(s)	381, 500, 674, 1764, 1767, 2310, 2693
BlpI	GCTNAGC	1 cut(s)	321
BlsI	GCNGC	7 cut(s)	382, 501, 675, 1765, 1768, 2311, 2694
Bme1390I	CCNGG	6 cut(s)	441, 894, 1050, 1191, 2419, 2941
Bme18I	GGWCC	5 cut(s)	443, 739, 1193, 2809, 2826
BmeT110I	CYCGRG	4 cut(s)	952, 2139, 2853, 2918
BmgT120I	GGNCC	5 cut(s)	443, 739, 1193, 2809, 2826
BmiI	GGNNCC	7 cut(s)	1047, 1195, 1849, 2385, 2696, 2810, 2848
BmrFI	CCNGG	6 cut(s)	441, 894, 1050, 1191, 2419, 2941
BpiI	GAAGAC	1 cut(s)	21
BplI	GAGNNNNNCTC	6 cut(s)	1277, 1309, 2249, 2281, 2384, 2416
BpmI	CTGGAG	2 cut(s)	1279, 1866
Bpu10I	CCTNAGC	1 cut(s)	2391
Bpu1102I	GCTNAGC	1 cut(s)	321
Bpu14I	TTCGAA	1 cut(s)	1039
BpuEI	CTTGAG	5 cut(s)	1649, 1878, 2508, 2643, 2671
Bsa29I	ATCGAT	2 cut(s)	1907, 1989
BsaAI	YACGTR	1 cut(s)	2537
BsaBI	GATNNNNATC	1 cut(s)	1224
BsaHI	GRCGYC	2 cut(s)	517, 1951
BsaI	GGTCTC	1 cut(s)	1061
BsaJI	CCNNGG	6 cut(s)	90, 122, 1407, 1465, 2021, 2140
BsaWI	WCCGGW	1 cut(s)	98
BsaXI	ACNNNNNCTCC	2 cut(s)	2413, 2443
Bse118I	RCCGGY	1 cut(s)	194
Bse1I	ACTGG	6 cut(s)	66, 606, 660, 2210, 2457, 2468
Bse21I	CCTNAGG	1 cut(s)	2359
Bse8I	GATNNNNATC	1 cut(s)	1224
BseBI	CCWGG	6 cut(s)	441, 894, 1050, 1191, 2419, 2941
BseCI	ATCGAT	2 cut(s)	1907, 1989
BseDI	CCNNGG	6 cut(s)	90, 122, 1407, 1465, 2021, 2140
BseJI	GATNNNNATC	1 cut(s)	1224
BseNI	ACTGG	6 cut(s)	66, 606, 660, 2210, 2457, 2468
BseRI	GAGGAG	2 cut(s)	1200, 1394
BseSI	GKGCMC	1 cut(s)	844
BseXI	GCAGC	6 cut(s)	367, 486, 660, 1750, 1778, 2321
Bsh1236I	CGCG	4 cut(s)	51, 256, 805, 2496
BshFI	GGCC	7 cut(s)	95, 333, 427, 1350, 1489, 2209, 2376
BshNI	GGYRCC	1 cut(s)	2694
BshVI	ATCGAT	2 cut(s)	1907, 1989
BsiHKAI	GWGCWC	2 cut(s)	913, 1741
BsiHKCI	CYCGRG	4 cut(s)	952, 2139, 2853, 2918
BsiSI	CCGG	2 cut(s)	99, 195
BslFI	GGGAC	3 cut(s)	358, 1179, 2822
BsmAI	GTCTC	6 cut(s)	1061, 1437, 2103, 2749, 2904, 2940
BsmFI	GGGAC	3 cut(s)	358, 1179, 2822
BsmI	GAATGC	1 cut(s)	2452
BsnI	GGCC	7 cut(s)	95, 333, 427, 1350, 1489, 2209, 2376
Bso31I	GGTCTC	1 cut(s)	1061
BsoBI	CYCGRG	4 cut(s)	952, 2139, 2853, 2918
Bsp119I	TTCGAA	1 cut(s)	1039
Bsp1286I	GDGCHC	4 cut(s)	642, 844, 913, 1741
Bsp1720I	GCTNAGC	1 cut(s)	321
Bsp68I	TCGCGA	1 cut(s)	2496
BspACI	CCGC	4 cut(s)	256, 1657, 1707, 2692
BspANI	GGCC	7 cut(s)	95, 333, 427, 1350, 1489, 2209, 2376
BspDI	ATCGAT	2 cut(s)	1907, 1989
BspFNI	CGCG	4 cut(s)	51, 256, 805, 2496
BspLI	GGNNCC	7 cut(s)	1047, 1195, 1849, 2385, 2696, 2810, 2848
BspMAI	CTGCAG	1 cut(s)	1768
BspMI	ACCTGC	2 cut(s)	1591, 2330
BspQI	GCTCTTC	1 cut(s)	2024
BspT104I	TTCGAA	1 cut(s)	1039
BspT107I	GGYRCC	1 cut(s)	2694
BspTNI	GGTCTC	1 cut(s)	1061
BsrBI	CCGCTC	1 cut(s)	1657
BsrFI	RCCGGY	1 cut(s)	194
BsrI	ACTGG	6 cut(s)	66, 606, 660, 2210, 2457, 2468
BssAI	RCCGGY	1 cut(s)	194
BssECI	CCNNGG	6 cut(s)	90, 122, 1407, 1465, 2021, 2140
BssNI	GRCGYC	2 cut(s)	517, 1951
BssSI	CACGAG	1 cut(s)	1740
BssT1I	CCWWGG	2 cut(s)	122, 1407
Bst2BI	CACGAG	1 cut(s)	1740
Bst2UI	CCWGG	6 cut(s)	441, 894, 1050, 1191, 2419, 2941
Bst6I	CTCTTC	2 cut(s)	791, 2024
BstACI	GRCGYC	2 cut(s)	517, 1951
BstAPI	GCANNNNNTGC	2 cut(s)	1736, 1772
BstBAI	YACGTR	1 cut(s)	2537
BstBI	TTCGAA	1 cut(s)	1039
BstC8I	GCNNGC	6 cut(s)	196, 627, 678, 774, 1025, 1881
BstDSI	CCRYGG	2 cut(s)	1465, 2021
BstENI	CCTNNNNNAGG	3 cut(s)	1324, 2222, 2433
BstFNI	CGCG	4 cut(s)	51, 256, 805, 2496
BstH2I	RGCGCY	1 cut(s)	2749
BstHHI	GCGC	6 cut(s)	51, 111, 283, 807, 1879, 2748
BstMAI	GTCTC	6 cut(s)	1061, 1437, 2103, 2749, 2904, 2940
BstMWI	GCNNNNNNNGC	9 cut(s)	389, 584, 593, 1390, 1736, 1772, 2745, 2871, 2959
BstNI	CCWGG	6 cut(s)	441, 894, 1050, 1191, 2419, 2941
BstNSI	RCATGY	1 cut(s)	776
BstSCI	CCNGG	6 cut(s)	439, 892, 1048, 1189, 2417, 2939
BstSFI	CTRYAG	4 cut(s)	375, 483, 1116, 1764
BstSLI	GKGCMC	1 cut(s)	844
BstUI	CGCG	4 cut(s)	51, 256, 805, 2496
BstV1I	GCAGC	6 cut(s)	367, 486, 660, 1750, 1778, 2321
BstV2I	GAAGAC	1 cut(s)	21
BstX2I	RGATCY	4 cut(s)	371, 1186, 1288, 2846
BstYI	RGATCY	4 cut(s)	371, 1186, 1288, 2846
Bsu15I	ATCGAT	2 cut(s)	1907, 1989
Bsu36I	CCTNAGG	1 cut(s)	2359
BsuI	GTATCC	1 cut(s)	2471
BsuRI	GGCC	7 cut(s)	95, 333, 427, 1350, 1489, 2209, 2376
BsuTUI	ATCGAT	2 cut(s)	1907, 1989
BtgI	CCRYGG	2 cut(s)	1465, 2021
BtgZI	GCGATG	1 cut(s)	237
BtsIMutI	CAGTG	4 cut(s)	111, 613, 1952, 2779
BtuMI	TCGCGA	1 cut(s)	2496
BveI	ACCTGC	2 cut(s)	1591, 2330
Cac8I	GCNNGC	6 cut(s)	196, 627, 678, 774, 1025, 1881
CaiI	CAGNNNCTG	2 cut(s)	383, 2066
CfoI	GCGC	6 cut(s)	51, 111, 283, 807, 1879, 2748
Cfr10I	RCCGGY	1 cut(s)	194
Cfr13I	GGNCC	5 cut(s)	443, 739, 1193, 2809, 2826
ClaI	ATCGAT	2 cut(s)	1907, 1989
CseI	GACGC	2 cut(s)	506, 1940
CsiI	ACCWGGT	1 cut(s)	1048
Csp6I	GTAC	4 cut(s)	722, 1121, 1136, 1555
CviQI	GTAC	4 cut(s)	722, 1121, 1136, 1555
DrdI	GACNNNNNNGTC	1 cut(s)	247
DseDI	GACNNNNNNGTC	1 cut(s)	247
EaeI	YGGCCR	1 cut(s)	1348
Eam1104I	CTCTTC	2 cut(s)	791, 2024
EarI	CTCTTC	2 cut(s)	791, 2024
EciI	GGCGGA	1 cut(s)	1722
Eco130I	CCWWGG	2 cut(s)	122, 1407
Eco147I	AGGCCT	2 cut(s)	95, 2376
Eco24I	GRGCYC	1 cut(s)	642
Eco31I	GGTCTC	1 cut(s)	1061
Eco47I	GGWCC	5 cut(s)	443, 739, 1193, 2809, 2826
Eco47III	AGCGCT	1 cut(s)	2747
Eco57I	CTGAAG	4 cut(s)	291, 524, 951, 1535
Eco72I	CACGTG	1 cut(s)	2537
Eco81I	CCTNAGG	1 cut(s)	2359
Eco88I	CYCGRG	4 cut(s)	952, 2139, 2853, 2918
EcoNI	CCTNNNNNAGG	3 cut(s)	1324, 2222, 2433
EcoO109I	RGGNCCY	1 cut(s)	739
EcoRII	CCWGG	6 cut(s)	439, 892, 1048, 1189, 2417, 2939
EcoT14I	CCWWGG	2 cut(s)	122, 1407
EcoT38I	GRGCYC	1 cut(s)	642
ErhI	CCWWGG	2 cut(s)	122, 1407
FalI	AAGNNNNNCTT	2 cut(s)	1671, 1703
FaqI	GGGAC	3 cut(s)	358, 1179, 2822
FauNDI	CATATG	2 cut(s)	559, 1719
Fnu4HI	GCNGC	7 cut(s)	381, 500, 674, 1764, 1767, 2310, 2693
FriOI	GRGCYC	1 cut(s)	642
Fsp4HI	GCNGC	7 cut(s)	381, 500, 674, 1764, 1767, 2310, 2693
FspBI	CTAG	5 cut(s)	1334, 2372, 2378, 2751, 2823
FspI	TGCGCA	1 cut(s)	110
GlaI	GCGC	6 cut(s)	50, 110, 282, 806, 1878, 2747
GluI	GCNGC	7 cut(s)	381, 500, 674, 1764, 1767, 2310, 2693
GsuI	CTGGAG	2 cut(s)	1279, 1866
HaeII	RGCGCY	1 cut(s)	2749
HaeIII	GGCC	7 cut(s)	95, 333, 427, 1350, 1489, 2209, 2376
HapII	CCGG	2 cut(s)	99, 195
HgaI	GACGC	2 cut(s)	506, 1940
HhaI	GCGC	6 cut(s)	51, 111, 283, 807, 1879, 2748
Hin1I	GRCGYC	2 cut(s)	517, 1951
Hin6I	GCGC	6 cut(s)	49, 109, 281, 805, 1877, 2746
HinP1I	GCGC	6 cut(s)	49, 109, 281, 805, 1877, 2746
HincII	GTYRAC	2 cut(s)	2164, 2215
HindII	GTYRAC	2 cut(s)	2164, 2215
HindIII	AAGCTT	2 cut(s)	585, 1178
HpaII	CCGG	2 cut(s)	99, 195
HphI	GGTGA	5 cut(s)	55, 1950, 2354, 2709, 2807
Hpy166II	GTNNAC	6 cut(s)	231, 398, 1860, 2164, 2215, 2717
Hpy8I	GTNNAC	6 cut(s)	231, 398, 1860, 2164, 2215, 2717
Hpy99I	CGWCG	2 cut(s)	89, 2904
HpyCH4IV	ACGT	4 cut(s)	2199, 2536, 2899, 2929
HpyF10VI	GCNNNNNNNGC	9 cut(s)	389, 584, 593, 1390, 1736, 1772, 2745, 2871, 2959
HpySE526I	ACGT	4 cut(s)	2199, 2536, 2899, 2929
Hsp92I	GRCGYC	2 cut(s)	517, 1951
HspAI	GCGC	6 cut(s)	49, 109, 281, 805, 1877, 2746
KroI	GCCGGC	1 cut(s)	194
KroNI	GCCGGC	1 cut(s)	196
LguI	GCTCTTC	1 cut(s)	2024
Lsp1109I	GCAGC	6 cut(s)	367, 486, 660, 1750, 1778, 2321
MabI	ACCWGGT	1 cut(s)	1048
MaeI	CTAG	5 cut(s)	1334, 2372, 2378, 2751, 2823
MaeII	ACGT	4 cut(s)	2199, 2536, 2899, 2929
MaeIII	GTNAC	6 cut(s)	101, 956, 2342, 2537, 2561, 2813
MbiI	CCGCTC	1 cut(s)	1657
MfeI	CAATTG	1 cut(s)	2178
MflI	RGATCY	4 cut(s)	371, 1186, 1288, 2846
MhlI	GDGCHC	4 cut(s)	642, 844, 913, 1741
MlsI	TGGCCA	1 cut(s)	1350
MluNI	TGGCCA	1 cut(s)	1350
MlyI	GAGTC	5 cut(s)	626, 1520, 1709, 1723, 2906
MmeI	TCCRAC	1 cut(s)	1318
Mox20I	TGGCCA	1 cut(s)	1350
MroNI	GCCGGC	1 cut(s)	194
MroXI	GAANNNNTTC	2 cut(s)	462, 1731
MscI	TGGCCA	1 cut(s)	1350
MseI	TTAA	2 cut(s)	1238, 2324
MslI	CAYNNNNRTG	1 cut(s)	2700
Msp20I	TGGCCA	1 cut(s)	1350
MspA1I	CMGCKG	2 cut(s)	380, 625
MspI	CCGG	2 cut(s)	99, 195
MspR9I	CCNGG	6 cut(s)	441, 894, 1050, 1191, 2419, 2941
MunI	CAATTG	1 cut(s)	2178
Mva1269I	GAATGC	1 cut(s)	2452
MvaI	CCWGG	6 cut(s)	441, 894, 1050, 1191, 2419, 2941
MvnI	CGCG	4 cut(s)	51, 256, 805, 2496
MwoI	GCNNNNNNNGC	9 cut(s)	389, 584, 593, 1390, 1736, 1772, 2745, 2871, 2959
NaeI	GCCGGC	1 cut(s)	196
NdeI	CATATG	2 cut(s)	559, 1719
NgoMIV	GCCGGC	1 cut(s)	194
NlaIV	GGNNCC	7 cut(s)	1047, 1195, 1849, 2385, 2696, 2810, 2848
NmeAIII	GCCGAG	1 cut(s)	115
NmuCI	GTSAC	3 cut(s)	2342, 2537, 2813
NruI	TCGCGA	1 cut(s)	2496
NsbI	TGCGCA	1 cut(s)	110
NspI	RCATGY	1 cut(s)	776
NspV	TTCGAA	1 cut(s)	1039
PaeI	GCATGC	1 cut(s)	776
PaeR7I	CTCGAG	1 cut(s)	2853
PaqCI	CACCTGC	1 cut(s)	2330
PceI	AGGCCT	2 cut(s)	95, 2376
PciSI	GCTCTTC	1 cut(s)	2024
PctI	GAATGC	1 cut(s)	2452
PdiI	GCCGGC	1 cut(s)	196
PdmI	GAANNNNTTC	2 cut(s)	462, 1731
PfeI	GAWTC	8 cut(s)	479, 539, 2063, 2354, 2623, 2777, 2789, 2936
PflFI	GACNNNGTC	1 cut(s)	1247
PflMI	CCANNNNNTGG	1 cut(s)	340
PfoI	TCCNGGA	2 cut(s)	439, 2939
PkrI	GCNGC	7 cut(s)	382, 501, 675, 1765, 1768, 2311, 2694
PleI	GAGTC	5 cut(s)	626, 1519, 1708, 1722, 2906
PmaCI	CACGTG	1 cut(s)	2537
PmlI	CACGTG	1 cut(s)	2537
PpsI	GAGTC	5 cut(s)	626, 1519, 1708, 1722, 2906
Ppu21I	YACGTR	1 cut(s)	2537
PpuMI	RGGWCCY	1 cut(s)	739
PsiI	TTATAA	2 cut(s)	768, 948
Psp1406I	AACGTT	2 cut(s)	2199, 2929
Psp5II	RGGWCCY	1 cut(s)	739
Psp6I	CCWGG	6 cut(s)	439, 892, 1048, 1189, 2417, 2939
PspCI	CACGTG	1 cut(s)	2537
PspGI	CCWGG	6 cut(s)	439, 892, 1048, 1189, 2417, 2939
PspN4I	GGNNCC	7 cut(s)	1047, 1195, 1849, 2385, 2696, 2810, 2848
PspPI	GGNCC	5 cut(s)	443, 739, 1193, 2809, 2826
PspPPI	RGGWCCY	1 cut(s)	739
PstI	CTGCAG	1 cut(s)	1768
PstNI	CAGNNNCTG	2 cut(s)	383, 2066
PsuI	RGATCY	4 cut(s)	371, 1186, 1288, 2846
PsyI	GACNNNGTC	1 cut(s)	1247
PvuII	CAGCTG	2 cut(s)	380, 625
RruI	TCGCGA	1 cut(s)	2496
RsaI	GTAC	4 cut(s)	723, 1122, 1137, 1556
RsaNI	GTAC	4 cut(s)	722, 1121, 1136, 1555
RseI	CAYNNNNRTG	1 cut(s)	2700
SapI	GCTCTTC	1 cut(s)	2024
SaqAI	TTAA	2 cut(s)	1238, 2324
SatI	GCNGC	7 cut(s)	381, 500, 674, 1764, 1767, 2310, 2693
Sau96I	GGNCC	5 cut(s)	443, 739, 1193, 2809, 2826
SchI	GAGTC	5 cut(s)	626, 1520, 1709, 1723, 2906
ScrFI	CCNGG	6 cut(s)	441, 894, 1050, 1191, 2419, 2941
SduI	GDGCHC	4 cut(s)	642, 844, 913, 1741
SexAI	ACCWGGT	1 cut(s)	1048
SfcI	CTRYAG	4 cut(s)	375, 483, 1116, 1764
Sfr274I	CTCGAG	1 cut(s)	2853
SfuI	TTCGAA	1 cut(s)	1039
SinI	GGWCC	5 cut(s)	443, 739, 1193, 2809, 2826
SlaI	CTCGAG	1 cut(s)	2853
SmiMI	CAYNNNNRTG	1 cut(s)	2700
SmlI	CTYRAG	6 cut(s)	1664, 1893, 2523, 2658, 2686, 2853
SmoI	CTYRAG	6 cut(s)	1664, 1893, 2523, 2658, 2686, 2853
SphI	GCATGC	1 cut(s)	776
SseBI	AGGCCT	2 cut(s)	95, 2376
SsiI	CCGC	4 cut(s)	256, 1657, 1707, 2692
SspMI	CTAG	5 cut(s)	1334, 2372, 2378, 2751, 2823
StuI	AGGCCT	2 cut(s)	95, 2376
StyD4I	CCNGG	6 cut(s)	439, 892, 1048, 1189, 2417, 2939
StyI	CCWWGG	2 cut(s)	122, 1407
TaiI	ACGT	4 cut(s)	2202, 2539, 2902, 2932
TatI	WGTACW	2 cut(s)	721, 1554
TauI	GCSGC	1 cut(s)	2695
TfiI	GAWTC	8 cut(s)	479, 539, 2063, 2354, 2623, 2777, 2789, 2936
Tru1I	TTAA	2 cut(s)	1238, 2324
Tru9I	TTAA	2 cut(s)	1238, 2324
TscAI	CASTG	4 cut(s)	118, 613, 1952, 2779
TseFI	GTSAC	3 cut(s)	2342, 2537, 2813
TseI	GCWGC	6 cut(s)	380, 499, 673, 1763, 1766, 2309
Tsp45I	GTSAC	3 cut(s)	2342, 2537, 2813
TspGWI	ACGGA	4 cut(s)	48, 73, 1948, 2038
TspRI	CASTG	4 cut(s)	118, 613, 1952, 2779
Tth111I	GACNNNGTC	1 cut(s)	1247
Van91I	CCANNNNNTGG	1 cut(s)	340
VpaK11BI	GGWCC	5 cut(s)	443, 739, 1193, 2809, 2826
XagI	CCTNNNNNAGG	3 cut(s)	1324, 2222, 2433
XapI	RAATTY	4 cut(s)	972, 1148, 1473, 1516
XceI	RCATGY	1 cut(s)	776
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1414
XhoI	CTCGAG	1 cut(s)	2853
XmnI	GAANNNNTTC	2 cut(s)	462, 1731
XspI	CTAG	5 cut(s)	1334, 2372, 2378, 2751, 2823

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.