Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0012025

Physical Location & Seq

Genomic Coordinates Forward (+)

64206653 .. 64215683

Gene Structure 9031 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000004987

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2970 bp

ATGGATTCCGACGAAGAAGACTTCGTCTTCTACGGAACGCCAATAGCGCGCGAGGATGACGTCAACACCAGCCGGAAGAAGAAGTCCGTCGCCGAAGCCTCCGGTCAGCTCCGCACTCTCGCTCCTTGGAAGCAAGAGGTTAGAGATGAAGAAGGGAGAAGAAGATTTCACGGGGCCTTTAGCGGAGGGTTTTCTGCTGGCTACTACAATACAGTGGGATCGAAAGAGGGTTGGACACCACAGACCTTTGTGTCTTCCCGTAAGAACAGAGCTGAAGTCAAACAGCAGGACATTTTGAACTTTCTAGATGAAGATGAAAGAGCTGAATTGGAAGGTCAATCTTTGGGGACATCTTCACAGTTTGATACATTTGGGTTTACCGCTGCAGATCACGCTCGAAAACATGCAGAAAAGGAACATCAGAAAAGGCCATCAGCTATTCCTGGACCTGTTCCTGATGAATTGGTACTTCCGGCCACAGATTCTATAGGTGTAAAGTTGCTGCTGAAGATGGGATGGCGGCGTGGTCGATCAATTAAGGATTCACATACTGATGTAGCATATGATGCTCGAAGGGAGGCTAGAAAAGCTTTCTTAGCATTTTCTACTAATGATGCGAAAACACAGCTGGCGGACTCTGAACCCATTCATAATAAAAAATCTGAGAATTGTACAGAGCAGCCTGCAAGTGATGATGTCCAGTCTTCACAAAGTACACCTGTTTATGTACTGAACCCAAAGCAGGATCTGCATGGATTAGGCTTTGATCCTTTTAAGCATGCTCCTGAGTTTAGGGAAAAGAAAAGATCACGCGTGTCTGATAATAGGGGCCCTGGAAACAAAAGTGCTCTTTTAATGAACAATAGTCTTTTTGGCTTCAAATCAGGAAAAGCTGCTCCTGGTTTTGGAATTGGAGCACTTGAAGATTTTGATGCTGAAGATGAGGATGTCTACGCCTCTGGCTATGACTTCGAGGAGACTTATGCTGAAGATATTGATGAGCCAACAAAATTGATCATGGATAGTAAGCAAAAGTCAGTTCAAAAGGAAGCAGGTGCTCTCTCTGGATTTAGACTTGCATCAAATTCTGACTACCAGCTTGAAAGATTTGATCCTCCTGTAGTTCCAAAGGATTTTGTACCCCATCATAAATTTCCTGGGCCTCGTGAGACTAGCTACAAACTTGGAGATCCTGGTCCCCCGGAAGTCCCACCGCCTCAGGATAATAATCTGAAACTGTTAATTGATGGGGTTGCAACTTTAGTAGCTCGATGTGGCAAATTATTTGAGGATCTCTCAAGAGAGAAAAATCAATCAAATCCATTGTTTAGTTTTCTTATTGGAGGAAATGGTCATGAGTATTATGCAAGGAAGCTGTGGGAGGAGCAACAGAAGAGAGGAGATCAAACCAAGCTGCAATTAGATGGTAAATTGTCTCCAAGAACACAGAAAATGACAGCAGAGAGTCGGGGAAAAATTTTAGGGGAAAGGCCTTTGGAGCGAAGCTCTAAGGACTTGAGTACATCAATTCCTTCTACAGATGCGATTCATCTTCAGTACAATCTTTCAGATACATTTACTGATCCCTCATCATATAGTGAGATGCCAGTAGTTGCGAAACCCTTCATACATGATGCAGCAAAGCAAGAAAGATTTGAGCAGTTTCTTAAGGACAAGTACCAAGGAGGGCTTCGATCTACTGACTCTGGTAGAGCTAGTCATATGTCAGAAGCAGCTCGTGCTCTTGAGAGATTAGACTTTGAAGCTGCAGCTGAGGCAATAAAAAAAGGGAAATGGAGTAAAGAAATCTCTACATCACTTACTGGAGGGATGGAATTTACTTCTGGGGGATTTGTGCAAGCTAAAGATACTCAAGCTCAAGATGCGATCCCAAAGGAAGTCCATGTAAAACGAACAGAATATCAATGGCGTCCTTCACCTATCCTATGCAAACGGTTTGATCTGATTGATCCTTATATGGGGAAGCCAGCACCAGCTCCACGATCAAAGAGTAAAATTGAAACTCTCATTTTCACATCCGATTCTGTAAAAGCAACTAAAGAAGAAGAAACTATAATTGTAAAGAGAGACTCATATCAGATGCCTCAACCTGAGGCCCAAGGAATAAGCAAAGATGCAGCTGACAATGAAAGTGGTGGTGAGGTGGAAGTTGAAAATGTGGAGAGGCCTGTTGACCTTTACAAGGCTATCTTTTCTGATGATTCAGATGATGAAGAGGATACCTCTATTCCTAATGAAGTTGGTAATCCCGAGAAGAAGGTTGAAGCAGCTAATACAACATTAAACCGTTTGATTGCAGGTGACTTTTTGGAATCCTTGGGTAAAGAACTTGGCTTAGAGGTTCCGCCCGAGTTGTCTTCCTCAACAAACAAAGCCATGAATTCTGCACCTCCCAAAGAAACTGCCAATGCCAATTCAAGAATTTGCAGTACTTATTCAGTTGAAGATCCTTCCACTCTTAATGTCCCTCACAGCCAGGAGATTGTTCAAGATCGTTCATCTGAAAAAAGGGAGCCTGTTAATGGTAACTTAATAGGTAACTCGGCCAGAAGTAATAGCACATACGCTGAGACTGCTTCTTTAGGGAATCAGGTTGATAAAAATATTTCAGAGAAAGGACCTCTACAGGATAGGAAATTTAAAACCCCCTCAAGGCGGCACCGAAGCAGCAGCTCATCATCAGAAGATGAAAGGAGTAGAAAGCGCTCCAGGCGACGTCGACACAGACACAGTGATTCAGATAGTGATTCATCCAGTGATCATCAAGGCCGATATCATTCTAGGTCTAAAGGGAAGAAGAAAGGATCCTCACGAGAAAAGAGCAGTAGTAGCAGAAGTCACTCAAAACATCACAAGCGTAGAAGCAGAGACTCCCCAAGTAGATATGATTATTCCCCTGAGAAGGAACGCACAGAAACCAAGAGAGATAAGCACAAAAGGAGGGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000375 GO:0000377 GO:0000398 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005681 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009888 GO:0009892 GO:0009987 GO:0010033 GO:0010087 GO:0010467 GO:0010468 GO:0010605 GO:0010608 GO:0010629 GO:0014070 GO:0016070 GO:0016071 GO:0016246 GO:0016441 GO:0016458 GO:0019222 GO:0030422 GO:0031047 GO:0031050 GO:0032502 GO:0032991 GO:0034641 GO:0035194 GO:0035195 GO:0035196 GO:0040029 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043331 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0048519 GO:0048856 GO:0050789 GO:0050896 GO:0051716 GO:0060255 GO:0065007 GO:0070878 GO:0070883 GO:0070887 GO:0070918 GO:0071013 GO:0071310 GO:0071359 GO:0071407 GO:0071704 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1901698 GO:1901699 GO:1902494 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF1604 Surp

Protein Analysis

990

Amino Acids

110.62

Weight (kDa)

6.72

Isoelectric Point (pI)

62.81

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF1604	PF07713	41 - 121	1.9e-35	Protein of unknown function (DUF1604)
Surp	PF01805	414 - 461	3.7e-11	Surp module
HTH_TGH	PF26093	520 - 596	1.3e-19	TGH-like, helix-turn-helix domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0012025)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G23080 AT5G23080
fragaria_vesca	FvH4_5g12911 FvH4_5g12911
malus_domestica	MD06G1209200.v1.1 MD14G1219700.v1.1
prunus_persica	Prupe.5G214300_v2.0.a1
pyrus_communis	pycom06g18680 pycom14g18200
rosa_chinensis	RchiOBHm_Chr7g0184311
rosa_laevigata	RLG00000004987
rosa_multiflora	Rmu_co8385771.1_g000001 Rmu_co8404991.1_g000001
rosa_roxburghii	Rroxscaffold_3G00269740
rosa_samantha	Rh7AG081200 Rh7BG066100 Rh7CG066400 Rh7DG066100
rosa_wichuraiana	Rw7G005420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	1043, 2309
AasI	GACNNNNNNGTC	1 cut(s)	250
AatII	GACGTC	2 cut(s)	63, 2740
Acc36I	ACCTGC	2 cut(s)	1043, 2309
AccB1I	GGYRCC	1 cut(s)	2679
AccI	GTMKAC	2 cut(s)	951, 2740
AccII	CGCG	3 cut(s)	49, 51, 813
AciI	CCGC	8 cut(s)	112, 183, 381, 520, 632, 1214, 2366, 2677
AcoI	YGGCCR	2 cut(s)	474, 2565
AcsI	RAATTY	7 cut(s)	1084, 1151, 1476, 1835, 2401, 2442, 2657
AcuI	CTGAAG	5 cut(s)	294, 527, 957, 1008, 1538
AcyI	GRCGYC	3 cut(s)	60, 1930, 2737
AfaI	GTAC	9 cut(s)	468, 673, 715, 729, 1140, 1522, 1559, 1679, 2452
AfeI	AGCGCT	1 cut(s)	2726
AfiI	CCNNNNNNNGG	8 cut(s)	742, 905, 1979, 2203, 2543, 2673, 2676, 2923
AflII	CTTAAG	1 cut(s)	1667
AflIII	ACRYGT	1 cut(s)	811
AjnI	CCWGG	7 cut(s)	442, 832, 898, 1156, 1192, 2496, 2729
AjuI	GAANNNNNNNTTGG	2 cut(s)	1674, 1706
Alw21I	GWGCWC	4 cut(s)	850, 919, 1060, 1744
Alw26I	GTCTC	6 cut(s)	971, 1163, 1440, 2082, 2585, 2883
AlwNI	CAGNNNCTG	1 cut(s)	748
Ama87I	CYCGRG	2 cut(s)	2270, 2369
Aor51HI	AGCGCT	1 cut(s)	2726
ApaI	GGGCCC	1 cut(s)	833
ApoI	RAATTY	7 cut(s)	1084, 1151, 1476, 1835, 2401, 2442, 2657
Asp700I	GAANNNNTTC	2 cut(s)	645, 1622
AspLEI	GCGC	3 cut(s)	49, 51, 2727
AspS9I	GGNCC	8 cut(s)	174, 446, 829, 830, 1160, 1196, 2116, 2639
AsuC2I	CCSGG	1 cut(s)	1202
AsuHPI	GGTGA	3 cut(s)	1929, 2171, 2333
AvaI	CYCGRG	2 cut(s)	2270, 2369
AvaII	GGWCC	3 cut(s)	446, 1196, 2639
AxyI	CCTNAGG	2 cut(s)	1218, 2112
BaeGI	GKGCMC	1 cut(s)	833
BamHI	GGATCC	1 cut(s)	2825
BanI	GGYRCC	1 cut(s)	2679
BanII	GRGCYC	1 cut(s)	833
BauI	CACGAG	3 cut(s)	1164, 1737, 2832
BbsI	GAAGAC	5 cut(s)	19, 24, 246, 696, 2370
Bbv12I	GWGCWC	4 cut(s)	850, 919, 1060, 1744
BbvCI	CCTCAGC	1 cut(s)	1773
BccI	CCATC	7 cut(s)	439, 505, 510, 1152, 1241, 1418, 1825
BciT130I	CCWGG	7 cut(s)	444, 834, 900, 1158, 1194, 2498, 2731
BciVI	GTATCC	1 cut(s)	2233
BclI	TGATCA	2 cut(s)	1014, 2779
BcnI	CCSGG	1 cut(s)	1202
BcoDI	GTCTC	6 cut(s)	971, 1163, 1440, 2082, 2585, 2883
BfaI	CTAG	5 cut(s)	305, 582, 1173, 1716, 2802
BfmI	CTRYAG	6 cut(s)	384, 486, 1119, 1536, 1767, 2645
BfoI	RGCGCY	1 cut(s)	2728
BfrI	CTTAAG	1 cut(s)	1667
BfuAI	ACCTGC	2 cut(s)	1043, 2309
BfuI	GTATCC	1 cut(s)	2233
BmcAI	AGTACT	1 cut(s)	2452
Bme1390I	CCNGG	8 cut(s)	444, 834, 900, 1158, 1194, 1202, 2498, 2731
Bme18I	GGWCC	3 cut(s)	446, 1196, 2639
BmeT110I	CYCGRG	2 cut(s)	2270, 2369
BmgT120I	GGNCC	8 cut(s)	174, 446, 829, 830, 1160, 1196, 2116, 2639
BmiI	GGNNCC	8 cut(s)	175, 830, 831, 1198, 2364, 2535, 2681, 2827
BmrFI	CCNGG	8 cut(s)	444, 834, 900, 1158, 1194, 1202, 2498, 2731
BpiI	GAAGAC	5 cut(s)	19, 24, 246, 696, 2370
BplI	GAGNNNNNCTC	6 cut(s)	1280, 1312, 1490, 1522, 2228, 2260
BpmI	CTGGAG	2 cut(s)	1845, 2713
Bpu10I	CCTNAGC	1 cut(s)	1773
BpuEI	CTTGAG	6 cut(s)	1282, 1537, 1766, 1857, 1863, 2656
BpuMI	CCSGG	1 cut(s)	1202
BsaBI	GATNNNNATC	1 cut(s)	1227
BsaHI	GRCGYC	3 cut(s)	60, 1930, 2737
BsaJI	CCNNGG	7 cut(s)	125, 832, 1157, 1200, 1681, 2119, 2337
BsaWI	WCCGGW	1 cut(s)	101
BsaXI	ACNNNNNCTCC	2 cut(s)	106, 136
Bsc4I	CCNNNNNNNGG	8 cut(s)	742, 905, 1979, 2203, 2543, 2673, 2676, 2923
Bse1I	ACTGG	4 cut(s)	700, 1607, 1828, 2775
Bse21I	CCTNAGG	2 cut(s)	1218, 2112
Bse8I	GATNNNNATC	1 cut(s)	1227
BseBI	CCWGG	7 cut(s)	444, 834, 900, 1158, 1194, 2498, 2731
BseDI	CCNNGG	7 cut(s)	125, 832, 1157, 1200, 1681, 2119, 2337
BseGI	GGATG	6 cut(s)	61, 521, 952, 1836, 2036, 2771
BseJI	GATNNNNATC	1 cut(s)	1227
BseLI	CCNNNNNNNGG	8 cut(s)	742, 905, 1979, 2203, 2543, 2673, 2676, 2923
BseMII	CTCAG	7 cut(s)	654, 777, 1232, 1764, 2103, 2580, 2910
BseNI	ACTGG	4 cut(s)	700, 1607, 1828, 2775
BsePI	GCGCGC	1 cut(s)	47
BseRI	GAGGAG	3 cut(s)	989, 1397, 1413
BseSI	GKGCMC	1 cut(s)	833
BsgI	GTGCAG	1 cut(s)	2391
Bsh1236I	CGCG	3 cut(s)	49, 51, 813
BshNI	GGYRCC	1 cut(s)	2679
BsiHKAI	GWGCWC	4 cut(s)	850, 919, 1060, 1744
BsiHKCI	CYCGRG	2 cut(s)	2270, 2369
BsiSI	CCGG	4 cut(s)	73, 102, 473, 1202
BslFI	GGGAC	4 cut(s)	361, 1182, 1193, 2471
BslI	CCNNNNNNNGG	8 cut(s)	742, 905, 1979, 2203, 2543, 2673, 2676, 2923
BsmAI	GTCTC	6 cut(s)	971, 1163, 1440, 2082, 2585, 2883
BsmFI	GGGAC	4 cut(s)	361, 1182, 1193, 2471
BsoBI	CYCGRG	2 cut(s)	2270, 2369
Bsp120I	GGGCCC	1 cut(s)	829
Bsp1286I	GDGCHC	5 cut(s)	833, 850, 919, 1060, 1744
Bsp1407I	TGTACA	1 cut(s)	671
BspACI	CCGC	8 cut(s)	112, 183, 381, 520, 632, 1214, 2366, 2677
BspCNI	CTCAG	7 cut(s)	655, 778, 1231, 1765, 2104, 2581, 2911
BspFNI	CGCG	3 cut(s)	49, 51, 813
BspHI	TCATGA	1 cut(s)	1354
BspLI	GGNNCC	8 cut(s)	175, 830, 831, 1198, 2364, 2535, 2681, 2827
BspMAI	CTGCAG	2 cut(s)	388, 1771
BspMI	ACCTGC	2 cut(s)	1043, 2309
BspT107I	GGYRCC	1 cut(s)	2679
BspTI	CTTAAG	1 cut(s)	1667
BsrGI	TGTACA	1 cut(s)	671
BsrI	ACTGG	4 cut(s)	700, 1607, 1828, 2775
BssECI	CCNNGG	7 cut(s)	125, 832, 1157, 1200, 1681, 2119, 2337
BssHII	GCGCGC	1 cut(s)	47
BssNI	GRCGYC	3 cut(s)	60, 1930, 2737
BssSI	CACGAG	3 cut(s)	1164, 1737, 2832
BssT1I	CCWWGG	4 cut(s)	125, 1681, 2119, 2337
Bst2BI	CACGAG	3 cut(s)	1164, 1737, 2832
Bst2UI	CCWGG	7 cut(s)	444, 834, 900, 1158, 1194, 2498, 2731
Bst4CI	ACNGT	6 cut(s)	214, 360, 1239, 1956, 2309, 2753
Bst6I	CTCTTC	2 cut(s)	1388, 2229
BstACI	GRCGYC	3 cut(s)	60, 1930, 2737
BstAFI	CTTAAG	1 cut(s)	1667
BstAPI	GCANNNNNTGC	3 cut(s)	566, 748, 1739
BstAUI	TGTACA	1 cut(s)	671
BstC8I	GCNNGC	7 cut(s)	49, 199, 630, 684, 780, 1860, 1989
BstENI	CCTNNNNNAGG	1 cut(s)	2201
BstF5I	GGATG	6 cut(s)	61, 521, 952, 1836, 2036, 2771
BstFNI	CGCG	3 cut(s)	49, 51, 813
BstH2I	RGCGCY	1 cut(s)	2728
BstHHI	GCGC	3 cut(s)	49, 51, 2727
BstMAI	GTCTC	6 cut(s)	971, 1163, 1440, 2082, 2585, 2883
BstNI	CCWGG	7 cut(s)	444, 834, 900, 1158, 1194, 2498, 2731
BstNSI	RCATGY	2 cut(s)	407, 782
BstSCI	CCNGG	8 cut(s)	442, 832, 898, 1156, 1192, 1200, 2496, 2729
BstSFI	CTRYAG	6 cut(s)	384, 486, 1119, 1536, 1767, 2645
BstSLI	GKGCMC	1 cut(s)	833
BstUI	CGCG	3 cut(s)	49, 51, 813
BstV2I	GAAGAC	5 cut(s)	19, 24, 246, 696, 2370
BstX2I	RGATCY	5 cut(s)	745, 1189, 1291, 2467, 2825
BstYI	RGATCY	5 cut(s)	745, 1189, 1291, 2467, 2825
Bsu36I	CCTNAGG	2 cut(s)	1218, 2112
BsuI	GTATCC	1 cut(s)	2233
BtsCI	GGATG	6 cut(s)	61, 521, 952, 1836, 2036, 2771
BtsIMutI	CAGTG	3 cut(s)	219, 2758, 2782
BveI	ACCTGC	2 cut(s)	1043, 2309
Cac8I	GCNNGC	7 cut(s)	49, 199, 630, 684, 780, 1860, 1989
CaiI	CAGNNNCTG	1 cut(s)	748
CciI	TCATGA	1 cut(s)	1354
CfoI	GCGC	3 cut(s)	49, 51, 2727
Cfr13I	GGNCC	8 cut(s)	174, 446, 829, 830, 1160, 1196, 2116, 2639
CseI	GACGC	1 cut(s)	1919
Csp6I	GTAC	9 cut(s)	467, 672, 714, 728, 1139, 1521, 1558, 1678, 2451
CspCI	CAANNNNNGTGG	2 cut(s)	2134, 2169
CviAII	CATG	8 cut(s)	404, 752, 779, 1018, 1355, 1631, 1904, 2398
CviQI	GTAC	9 cut(s)	467, 672, 714, 728, 1139, 1521, 1558, 1678, 2451
DraI	TTTAAA	1 cut(s)	2662
DrdI	GACNNNNNNGTC	1 cut(s)	250
DseDI	GACNNNNNNGTC	1 cut(s)	250
EaeI	YGGCCR	2 cut(s)	474, 2565
Eam1104I	CTCTTC	2 cut(s)	1388, 2229
EarI	CTCTTC	2 cut(s)	1388, 2229
EciI	GGCGGA	2 cut(s)	647, 2355
Eco130I	CCWWGG	4 cut(s)	125, 1681, 2119, 2337
Eco147I	AGGCCT	2 cut(s)	1492, 2188
Eco24I	GRGCYC	1 cut(s)	833
Eco32I	GATATC	1 cut(s)	2795
Eco47I	GGWCC	3 cut(s)	446, 1196, 2639
Eco47III	AGCGCT	1 cut(s)	2726
Eco57I	CTGAAG	5 cut(s)	294, 527, 957, 1008, 1538
Eco81I	CCTNAGG	2 cut(s)	1218, 2112
Eco88I	CYCGRG	2 cut(s)	2270, 2369
EcoNI	CCTNNNNNAGG	1 cut(s)	2201
EcoO109I	RGGNCCY	4 cut(s)	174, 829, 830, 2639
EcoRI	GAATTC	1 cut(s)	2401
EcoRII	CCWGG	7 cut(s)	442, 832, 898, 1156, 1192, 2496, 2729
EcoRV	GATATC	1 cut(s)	2795
EcoT14I	CCWWGG	4 cut(s)	125, 1681, 2119, 2337
EcoT38I	GRGCYC	1 cut(s)	833
ErhI	CCWWGG	4 cut(s)	125, 1681, 2119, 2337
FaeI	CATG	8 cut(s)	407, 755, 782, 1021, 1358, 1634, 1907, 2401
FalI	AAGNNNNNCTT	4 cut(s)	1674, 1706, 2195, 2227
FaqI	GGGAC	4 cut(s)	361, 1182, 1193, 2471
FatI	CATG	8 cut(s)	403, 751, 778, 1017, 1354, 1630, 1903, 2397
FauNDI	CATATG	2 cut(s)	562, 1722
FbaI	TGATCA	2 cut(s)	1014, 2779
FblI	GTMKAC	2 cut(s)	951, 2740
FokI	GGATG	6 cut(s)	68, 528, 959, 1843, 2023, 2758
FriOI	GRGCYC	1 cut(s)	833
FspBI	CTAG	5 cut(s)	305, 582, 1173, 1716, 2802
GlaI	GCGC	3 cut(s)	48, 50, 2726
GsuI	CTGGAG	2 cut(s)	1845, 2713
HaeII	RGCGCY	1 cut(s)	2728
HapII	CCGG	4 cut(s)	73, 102, 473, 1202
HgaI	GACGC	1 cut(s)	1919
HhaI	GCGC	3 cut(s)	49, 51, 2727
Hin1I	GRCGYC	3 cut(s)	60, 1930, 2737
Hin1II	CATG	8 cut(s)	407, 755, 782, 1021, 1358, 1634, 1907, 2401
Hin6I	GCGC	3 cut(s)	47, 49, 2725
HinP1I	GCGC	3 cut(s)	47, 49, 2725
HincII	GTYRAC	3 cut(s)	64, 2194, 2741
HindII	GTYRAC	3 cut(s)	64, 2194, 2741
HindIII	AAGCTT	1 cut(s)	588
HpaII	CCGG	4 cut(s)	73, 102, 473, 1202
HphI	GGTGA	3 cut(s)	1929, 2171, 2333
Hpy166II	GTNNAC	6 cut(s)	64, 378, 716, 952, 2194, 2741
Hpy8I	GTNNAC	6 cut(s)	64, 378, 716, 952, 2194, 2741
Hpy99I	CGWCG	4 cut(s)	14, 92, 2739, 2742
HpyAV	CCTTC	9 cut(s)	146, 326, 567, 1542, 1633, 1944, 2272, 2481, 2917
HpyCH4III	ACNGT	6 cut(s)	214, 360, 1239, 1956, 2309, 2753
HpyCH4IV	ACGT	2 cut(s)	60, 2737
HpySE526I	ACGT	2 cut(s)	60, 2737
Hsp92I	GRCGYC	3 cut(s)	60, 1930, 2737
Hsp92II	CATG	8 cut(s)	407, 755, 782, 1021, 1358, 1634, 1907, 2401
HspAI	GCGC	3 cut(s)	47, 49, 2725
Ksp22I	TGATCA	2 cut(s)	1014, 2779
MaeI	CTAG	5 cut(s)	305, 582, 1173, 1716, 2802
MaeII	ACGT	2 cut(s)	60, 2737
MaeIII	GTNAC	4 cut(s)	2321, 2546, 2558, 2858
MflI	RGATCY	5 cut(s)	745, 1189, 1291, 2467, 2825
MhlI	GDGCHC	5 cut(s)	833, 850, 919, 1060, 1744
MluI	ACGCGT	1 cut(s)	811
MlyI	GAGTC	5 cut(s)	629, 1474, 1697, 2084, 2885
MmeI	TCCRAC	2 cut(s)	33, 212
MroXI	GAANNNNTTC	2 cut(s)	645, 1622
MslI	CAYNNNNRTG	1 cut(s)	552
MspA1I	CMGCKG	4 cut(s)	383, 628, 1772, 2141
MspCI	CTTAAG	1 cut(s)	1667
MspI	CCGG	4 cut(s)	73, 102, 473, 1202
MspR9I	CCNGG	8 cut(s)	444, 834, 900, 1158, 1194, 1202, 2498, 2731
MvaI	CCWGG	7 cut(s)	444, 834, 900, 1158, 1194, 2498, 2731
MvnI	CGCG	3 cut(s)	49, 51, 813
NciI	CCSGG	1 cut(s)	1202
NdeI	CATATG	2 cut(s)	562, 1722
NlaIII	CATG	8 cut(s)	407, 755, 782, 1021, 1358, 1634, 1907, 2401
NlaIV	GGNNCC	8 cut(s)	175, 830, 831, 1198, 2364, 2535, 2681, 2827
NmeAIII	GCCGAG	1 cut(s)	2543
NmuCI	GTSAC	2 cut(s)	2321, 2858
NspI	RCATGY	2 cut(s)	407, 782
PaeI	GCATGC	1 cut(s)	782
PagI	TCATGA	1 cut(s)	1354
PaqCI	CACCTGC	2 cut(s)	1043, 2309
PauI	GCGCGC	1 cut(s)	47
PceI	AGGCCT	2 cut(s)	1492, 2188
PdmI	GAANNNNTTC	2 cut(s)	645, 1622
PflFI	GACNNNGTC	1 cut(s)	23
PfoI	TCCNGGA	1 cut(s)	442
PleI	GAGTC	5 cut(s)	629, 1473, 1697, 2084, 2885
PpsI	GAGTC	5 cut(s)	629, 1473, 1697, 2084, 2885
PpuMI	RGGWCCY	1 cut(s)	2639
Psp5II	RGGWCCY	1 cut(s)	2639
Psp6I	CCWGG	7 cut(s)	442, 832, 898, 1156, 1192, 2496, 2729
PspGI	CCWGG	7 cut(s)	442, 832, 898, 1156, 1192, 2496, 2729
PspN4I	GGNNCC	8 cut(s)	175, 830, 831, 1198, 2364, 2535, 2681, 2827
PspOMI	GGGCCC	1 cut(s)	829
PspPI	GGNCC	8 cut(s)	174, 446, 829, 830, 1160, 1196, 2116, 2639
PspPPI	RGGWCCY	1 cut(s)	2639
PstI	CTGCAG	2 cut(s)	388, 1771
PstNI	CAGNNNCTG	1 cut(s)	748
PsuI	RGATCY	5 cut(s)	745, 1189, 1291, 2467, 2825
PsyI	GACNNNGTC	1 cut(s)	23
PteI	GCGCGC	1 cut(s)	47
PvuII	CAGCTG	3 cut(s)	628, 1772, 2141
RsaI	GTAC	9 cut(s)	468, 673, 715, 729, 1140, 1522, 1559, 1679, 2452
RsaNI	GTAC	9 cut(s)	467, 672, 714, 728, 1139, 1521, 1558, 1678, 2451
RseI	CAYNNNNRTG	1 cut(s)	552
SalI	GTCGAC	1 cut(s)	2739
Sau96I	GGNCC	8 cut(s)	174, 446, 829, 830, 1160, 1196, 2116, 2639
ScaI	AGTACT	1 cut(s)	2452
SchI	GAGTC	5 cut(s)	629, 1474, 1697, 2084, 2885
ScrFI	CCNGG	8 cut(s)	444, 834, 900, 1158, 1194, 1202, 2498, 2731
SduI	GDGCHC	5 cut(s)	833, 850, 919, 1060, 1744
SfcI	CTRYAG	6 cut(s)	384, 486, 1119, 1536, 1767, 2645
SinI	GGWCC	3 cut(s)	446, 1196, 2639
SmiMI	CAYNNNNRTG	1 cut(s)	552
SmlI	CTYRAG	7 cut(s)	1297, 1516, 1667, 1745, 1872, 1878, 2671
SmoI	CTYRAG	7 cut(s)	1297, 1516, 1667, 1745, 1872, 1878, 2671
SphI	GCATGC	1 cut(s)	782
SseBI	AGGCCT	2 cut(s)	1492, 2188
SsiI	CCGC	8 cut(s)	112, 183, 381, 520, 632, 1214, 2366, 2677
SspI	AATATT	1 cut(s)	2626
SspMI	CTAG	5 cut(s)	305, 582, 1173, 1716, 2802
StuI	AGGCCT	2 cut(s)	1492, 2188
StyD4I	CCNGG	8 cut(s)	442, 832, 898, 1156, 1192, 1200, 2496, 2729
StyI	CCWWGG	4 cut(s)	125, 1681, 2119, 2337
TaaI	ACNGT	6 cut(s)	214, 360, 1239, 1956, 2309, 2753
TaiI	ACGT	2 cut(s)	63, 2740
TaqI	TCGA	8 cut(s)	221, 397, 529, 571, 972, 1270, 1693, 2740
TatI	WGTACW	6 cut(s)	671, 713, 727, 1520, 1557, 2450
TauI	GCSGC	2 cut(s)	523, 2680
TscAI	CASTG	3 cut(s)	219, 2758, 2782
TseFI	GTSAC	2 cut(s)	2321, 2858
Tsp45I	GTSAC	2 cut(s)	2321, 2858
TspGWI	ACGGA	2 cut(s)	48, 76
TspRI	CASTG	3 cut(s)	219, 2758, 2782
Tth111I	GACNNNGTC	1 cut(s)	23
Vha464I	CTTAAG	1 cut(s)	1667
VpaK11BI	GGWCC	3 cut(s)	446, 1196, 2639
XagI	CCTNNNNNAGG	1 cut(s)	2201
XapI	RAATTY	7 cut(s)	1084, 1151, 1476, 1835, 2401, 2442, 2657
XbaI	TCTAGA	1 cut(s)	304
XceI	RCATGY	2 cut(s)	407, 782
XmiI	GTMKAC	2 cut(s)	951, 2740
XmnI	GAANNNNTTC	2 cut(s)	645, 1622
XspI	CTAG	5 cut(s)	305, 582, 1173, 1716, 2802
ZraI	GACGTC	2 cut(s)	61, 2738
ZrmI	AGTACT	1 cut(s)	2452

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.