Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr14

Orthogroup ID

OG0012025

Physical Location & Seq

Genomic Coordinates Reverse (-)

19917432 .. 19923183

Gene Structure 5752 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom14g18200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1914 bp

ATGGCTTCAGAAGAAGACGATTTCGTGTTCTACGGAACACCGATTGAGCGGGAGGAAGATTTAACCAGTCGCAAGAAGAAGTCCGTTGCTGAGGCCTCTGGTAACTTGCGTACTCTAGTTCCTTGGAAGCAAGAGGTTAGAGATGAAGAAGGGAGAAGGAGATTTCATGGTGCATTTAGTGGAGGGTTTTCTGCCGGCTATTACAATACAGTCGGCTCAAAAGAAGGGTGGACACCGCAGACCTTTGTGTCATCGCGGAAGAACAGAGCTGAAGTCAAACGGCAGGACATTATGAACTTTTTAGATGAAGATGAAAGAGCTGAACTTGAAGGCCAATCTTTGGGGACGTCTATGCAGTTTGATACATTTGGATCTACAGCTACTGAACTTGCTCGTAAACAAGCTGAGAAGGAACAACAGAAAAGGCCATCAGCTATTCCTGGACCAGTTCCTGATGAATTAGTTCTTCCAGCCACAGATTCTATAGGTGTGAAGTTGCTGCTGAAGATGGGATGGCGCCATGGTCGTTCAATCAAGGATTCACATACTGATTCATCATACGATGCTCGAAGGGAAGCGCGAAAAGCATTTTTAGCATTTTCTTCCAGTGGTGCAAAAACACAGCTTGCTGACTCTGAGCCTGTTCATGGCGACATGGAGGATCATATTGAGCTGCCTGCTAGTGATGATATTCAATCTTCTCAAAGCACACCTGTTTATGTAATCTACCCAAAGCAGGACCTTCACGGATTAGGTTTTGATCCTTATAAGCATGCGCCTGAGTTCAGGGAGAAGAAGAGATCACGCCTCTCTGAGAATAGGGGTATTGGATATATAAGTGCCCGTTCAAATGACAATAATCTTTTTGGCTTCAAGTCAGGAAAGGTTGCTCCTGGTTTTGGAATTGGAGCACTTGAAGAACTTGATGCTGAAGATGAGGATGTTTATAATTCTGGTTATGGATTTGAGGAAACTTATGTTGAAGATATTGATGATGAGCCTTCAAGATCAATCATGGATAGCAAGCAAAAGTCCGTTCGAAAGGAACCAGGTGGTCTCTCTGGATTTAGACTTGCATCTAATTCGGACTACCAACATGAGAGATTTGATCCTCCTGTAGTATCAAAAGATTTTGTACCCAACCATAAATTTTCTGGGCCTCTTGATAGTGGGTGCAAGCTTGGAGATCCTGGTCCCACAGAAGTCTCTCCTCCAGAGGATAGTAATCTGAAACTCTTAATTGACGGGGTCGCAACTTTAGTAGCTCGATGTGGTAAATTATTTGAGGATCTCTCTAGAGAGAAAAATCAGTCAAATCCCTTGTTTAGTTTTCTAGTTGGAGGGAATGGGCATGATTATTATGCAAGGAAACTGTGGGAGGAGCGGCAAAAGCGAGGCAATCACACCAAGGAGATATTGGATGGTAAATTGTCTCCACGAAAGCAGAAGATGACAGCAGAGAGCCGTGGAAAAATTTTAGGGGAAAGGGCTTTGGAACGAAGCTCCAAAGAGTCAAGTTCATCTGTTGCTTCTGAAGAGGCCATTCAGCTTCAGTACAACCTTTCAGATACATTTACTAAACCTGCATTAGATGGTGAGATGCTGGAAGTTGCAAAACCCTTCAACGATGATCCTGCAAAGCAAGAAAGGTTTGAGCGGTTTCTCAAGGAGAAATACCAAGGAGGACTTCGATCTACCGAGTCTGGTGGAGCTAGTCATATGTCAGAAGCAGTTCGTGCTCGTGAGAGATTAGACTTTGAGGCTGCAGCTGATGCAATACAGAAAGGGAAGTGGAGTAAAGAAAGCAAACTCTCCACATCACAGTTCATGGATTTTTTATCCGCTGGAGCGATGCAGTTTACTCCTGGGGGATCGATCTACAAGCCAAAGATACTCAAACTGAAAATTCGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000375 GO:0000377 GO:0000398 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005681 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009888 GO:0009892 GO:0009987 GO:0010033 GO:0010087 GO:0010467 GO:0010468 GO:0010605 GO:0010608 GO:0010629 GO:0014070 GO:0016070 GO:0016071 GO:0016246 GO:0016441 GO:0016458 GO:0019222 GO:0030422 GO:0031047 GO:0031050 GO:0032502 GO:0032991 GO:0034641 GO:0035194 GO:0035195 GO:0035196 GO:0040029 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043331 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0048519 GO:0048856 GO:0050789 GO:0050896 GO:0051716 GO:0060255 GO:0065007 GO:0070878 GO:0070883 GO:0070887 GO:0070918 GO:0071013 GO:0071310 GO:0071359 GO:0071407 GO:0071704 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1901698 GO:1901699 GO:1902494 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF1604 Surp

Protein Analysis

638

Amino Acids

71.08

Weight (kDa)

5.83

Isoelectric Point (pI)

53.25

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF1604	PF07713	41 - 118	2.6e-35	Protein of unknown function (DUF1604)
Surp	PF01805	413 - 460	2e-11	Surp module
HTH_TGH	PF26093	519 - 595	3.4e-22	TGH-like, helix-turn-helix domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012025)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G23080 AT5G23080
fragaria_vesca	FvH4_5g12911 FvH4_5g12911
malus_domestica	MD06G1209200.v1.1 MD14G1219700.v1.1
prunus_persica	Prupe.5G214300_v2.0.a1
pyrus_communis	pycom06g18680 pycom14g18200
rosa_chinensis	RchiOBHm_Chr7g0184311
rosa_laevigata	RLG00000004987
rosa_multiflora	Rmu_co8385771.1_g000001 Rmu_co8404991.1_g000001
rosa_roxburghii	Rroxscaffold_3G00269740
rosa_samantha	Rh7AG081200 Rh7BG066100 Rh7CG066400 Rh7DG066100
rosa_wichuraiana	Rw7G005420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	768, 948
AasI	GACNNNNNNGTC	1 cut(s)	247
AatII	GACGTC	1 cut(s)	350
Acc36I	ACCTGC	1 cut(s)	1591
AccB1I	GGYRCC	1 cut(s)	516
AccB7I	CCANNNNNTGG	1 cut(s)	340
AccBSI	CCGCTC	3 cut(s)	49, 1384, 1657
AccII	CGCG	2 cut(s)	256, 580
AciI	CCGC	6 cut(s)	49, 236, 256, 1384, 1657, 1842
AclWI	GGATC	8 cut(s)	379, 669, 755, 1103, 1181, 1296, 1625, 1879
AcsI	RAATTY	3 cut(s)	1148, 1473, 1905
AcuI	CTGAAG	5 cut(s)	291, 524, 951, 1535, 1554
AcyI	GRCGYC	2 cut(s)	347, 517
AfaI	GTAC	3 cut(s)	112, 1137, 1556
AfiI	CCNNNNNNNGG	4 cut(s)	340, 647, 736, 899
AgsI	TTSAA	9 cut(s)	329, 531, 695, 849, 874, 917, 983, 1005, 1624
AjnI	CCWGG	5 cut(s)	439, 892, 1048, 1189, 1864
AjuI	GAANNNNNNNTTGG	2 cut(s)	1671, 1703
Alw21I	GWGCWC	2 cut(s)	913, 1741
Alw26I	GTCTC	3 cut(s)	1061, 1210, 1437
AlwI	GGATC	8 cut(s)	379, 669, 755, 1103, 1181, 1296, 1625, 1879
AlwNI	CAGNNNCTG	2 cut(s)	383, 452
AoxI	GGCC	5 cut(s)	93, 331, 425, 1157, 1539
ApeKI	GCWGC	4 cut(s)	499, 673, 1763, 1766
ApoI	RAATTY	3 cut(s)	1148, 1473, 1905
Asp700I	GAANNNNTTC	2 cut(s)	462, 1731
AspLEI	GCGC	3 cut(s)	519, 580, 778
AspS9I	GGNCC	4 cut(s)	443, 739, 1157, 1193
AsuHPI	GGTGA	1 cut(s)	1607
AsuII	TTCGAA	1 cut(s)	1039
AvaII	GGWCC	3 cut(s)	443, 739, 1193
BaeGI	GKGCMC	1 cut(s)	844
BanI	GGYRCC	1 cut(s)	516
BauI	CACGAG	1 cut(s)	1740
BbsI	GAAGAC	1 cut(s)	21
Bbv12I	GWGCWC	2 cut(s)	913, 1741
BbvCI	CCTCAGC	1 cut(s)	90
BbvI	GCAGC	4 cut(s)	486, 660, 1750, 1778
BccI	CCATC	5 cut(s)	436, 502, 507, 1415, 1586
BceAI	ACGGC	2 cut(s)	296, 1449
BcgI	CGANNNNNNTGC	4 cut(s)	1065, 1099, 1616, 1650
BciT130I	CCWGG	5 cut(s)	441, 894, 1050, 1191, 1866
BcoDI	GTCTC	3 cut(s)	1061, 1210, 1437
BfaI	CTAG	5 cut(s)	116, 681, 1296, 1334, 1713
BfmI	CTRYAG	4 cut(s)	375, 483, 1116, 1764
BfoI	RGCGCY	1 cut(s)	520
BfuAI	ACCTGC	1 cut(s)	1591
BisI	GCNGC	5 cut(s)	500, 674, 1385, 1764, 1767
BlsI	GCNGC	5 cut(s)	501, 675, 1386, 1765, 1768
Bme1390I	CCNGG	5 cut(s)	441, 894, 1050, 1191, 1866
Bme18I	GGWCC	3 cut(s)	443, 739, 1193
BmgT120I	GGNCC	4 cut(s)	443, 739, 1157, 1193
BmiI	GGNNCC	3 cut(s)	518, 1047, 1195
BmrFI	CCNGG	5 cut(s)	441, 894, 1050, 1191, 1866
BmsI	GCATC	6 cut(s)	553, 916, 1085, 1590, 1762, 1842
BpiI	GAAGAC	1 cut(s)	21
BplI	GAGNNNNNCTC	2 cut(s)	1277, 1309
BpmI	CTGGAG	2 cut(s)	1197, 1866
Bpu10I	CCTNAGC	1 cut(s)	90
Bpu14I	TTCGAA	1 cut(s)	1039
BpuEI	CTTGAG	1 cut(s)	1649
Bsa29I	ATCGAT	1 cut(s)	1874
BsaBI	GATNNNNATC	1 cut(s)	1224
BsaHI	GRCGYC	2 cut(s)	347, 517
BsaI	GGTCTC	1 cut(s)	1061
BsaJI	CCNNGG	6 cut(s)	122, 520, 1407, 1465, 1678, 1865
Bsc4I	CCNNNNNNNGG	4 cut(s)	340, 647, 736, 899
Bse118I	RCCGGY	1 cut(s)	194
Bse1I	ACTGG	3 cut(s)	66, 446, 606
Bse8I	GATNNNNATC	1 cut(s)	1224
BseBI	CCWGG	5 cut(s)	441, 894, 1050, 1191, 1866
BseCI	ATCGAT	1 cut(s)	1874
BseDI	CCNNGG	6 cut(s)	122, 520, 1407, 1465, 1678, 1865
BseGI	GGATG	3 cut(s)	518, 946, 1426
BseJI	GATNNNNATC	1 cut(s)	1224
BseLI	CCNNNNNNNGG	4 cut(s)	340, 647, 736, 899
BseMII	CTCAG	5 cut(s)	81, 396, 627, 771, 804
BseNI	ACTGG	3 cut(s)	66, 446, 606
BseRI	GAGGAG	2 cut(s)	1200, 1394
BseSI	GKGCMC	1 cut(s)	844
BseXI	GCAGC	4 cut(s)	486, 660, 1750, 1778
Bsh1236I	CGCG	2 cut(s)	256, 580
BshFI	GGCC	5 cut(s)	95, 333, 427, 1159, 1541
BshNI	GGYRCC	1 cut(s)	516
BshVI	ATCGAT	1 cut(s)	1874
BsiHKAI	GWGCWC	2 cut(s)	913, 1741
BsiSI	CCGG	1 cut(s)	195
BslFI	GGGAC	2 cut(s)	358, 1179
BslI	CCNNNNNNNGG	4 cut(s)	340, 647, 736, 899
BsmAI	GTCTC	3 cut(s)	1061, 1210, 1437
BsmFI	GGGAC	2 cut(s)	358, 1179
BsnI	GGCC	5 cut(s)	95, 333, 427, 1159, 1541
Bso31I	GGTCTC	1 cut(s)	1061
Bsp119I	TTCGAA	1 cut(s)	1039
Bsp1286I	GDGCHC	3 cut(s)	844, 913, 1741
Bsp19I	CCATGG	1 cut(s)	520
BspACI	CCGC	6 cut(s)	49, 236, 256, 1384, 1657, 1842
BspANI	GGCC	5 cut(s)	95, 333, 427, 1159, 1541
BspCNI	CTCAG	5 cut(s)	82, 397, 628, 772, 805
BspDI	ATCGAT	1 cut(s)	1874
BspFNI	CGCG	2 cut(s)	256, 580
BspLI	GGNNCC	3 cut(s)	518, 1047, 1195
BspMAI	CTGCAG	1 cut(s)	1768
BspMI	ACCTGC	1 cut(s)	1591
BspPI	GGATC	8 cut(s)	379, 669, 755, 1103, 1181, 1296, 1625, 1879
BspT104I	TTCGAA	1 cut(s)	1039
BspT107I	GGYRCC	1 cut(s)	516
BspTNI	GGTCTC	1 cut(s)	1061
BsrBI	CCGCTC	3 cut(s)	49, 1384, 1657
BsrFI	RCCGGY	1 cut(s)	194
BsrI	ACTGG	3 cut(s)	66, 446, 606
BssAI	RCCGGY	1 cut(s)	194
BssECI	CCNNGG	6 cut(s)	122, 520, 1407, 1465, 1678, 1865
BssNI	GRCGYC	2 cut(s)	347, 517
BssSI	CACGAG	1 cut(s)	1740
BssT1I	CCWWGG	4 cut(s)	122, 520, 1407, 1678
Bst2BI	CACGAG	1 cut(s)	1740
Bst2UI	CCWGG	5 cut(s)	441, 894, 1050, 1191, 1866
Bst4CI	ACNGT	3 cut(s)	211, 1374, 1824
Bst6I	CTCTTC	2 cut(s)	791, 1530
BstACI	GRCGYC	2 cut(s)	347, 517
BstAPI	GCANNNNNTGC	2 cut(s)	1736, 1772
BstBI	TTCGAA	1 cut(s)	1039
BstC8I	GCNNGC	6 cut(s)	196, 627, 678, 774, 1025, 1178
BstDEI	CTNAG	5 cut(s)	90, 405, 636, 780, 813
BstDSI	CCRYGG	2 cut(s)	520, 1465
BstF5I	GGATG	3 cut(s)	518, 946, 1426
BstFNI	CGCG	2 cut(s)	256, 580
BstH2I	RGCGCY	1 cut(s)	520
BstHHI	GCGC	3 cut(s)	519, 580, 778
BstMAI	GTCTC	3 cut(s)	1061, 1210, 1437
BstMWI	GCNNNNNNNGC	5 cut(s)	584, 593, 1390, 1736, 1772
BstNI	CCWGG	5 cut(s)	441, 894, 1050, 1191, 1866
BstNSI	RCATGY	1 cut(s)	776
BstSCI	CCNGG	5 cut(s)	439, 892, 1048, 1189, 1864
BstSFI	CTRYAG	4 cut(s)	375, 483, 1116, 1764
BstSLI	GKGCMC	1 cut(s)	844
BstUI	CGCG	2 cut(s)	256, 580
BstV1I	GCAGC	4 cut(s)	486, 660, 1750, 1778
BstV2I	GAAGAC	1 cut(s)	21
BstX2I	RGATCY	3 cut(s)	371, 1186, 1288
BstYI	RGATCY	3 cut(s)	371, 1186, 1288
Bsu15I	ATCGAT	1 cut(s)	1874
BsuRI	GGCC	5 cut(s)	95, 333, 427, 1159, 1541
BsuTUI	ATCGAT	1 cut(s)	1874
BtgI	CCRYGG	2 cut(s)	520, 1465
BtgZI	GCGATG	2 cut(s)	237, 1865
BtsCI	GGATG	3 cut(s)	518, 946, 1426
BtsIMutI	CAGTG	1 cut(s)	613
BveI	ACCTGC	1 cut(s)	1591
Cac8I	GCNNGC	6 cut(s)	196, 627, 678, 774, 1025, 1178
CaiI	CAGNNNCTG	2 cut(s)	383, 452
CfoI	GCGC	3 cut(s)	519, 580, 778
Cfr10I	RCCGGY	1 cut(s)	194
Cfr13I	GGNCC	4 cut(s)	443, 739, 1157, 1193
ClaI	ATCGAT	1 cut(s)	1874
CsiI	ACCWGGT	1 cut(s)	1048
Csp6I	GTAC	3 cut(s)	111, 1136, 1555
CviAII	CATG	9 cut(s)	167, 521, 647, 655, 773, 1015, 1097, 1352, 1828
CviQI	GTAC	3 cut(s)	111, 1136, 1555
DdeI	CTNAG	5 cut(s)	90, 405, 636, 780, 813
DinI	GGCGCC	1 cut(s)	518
DrdI	GACNNNNNNGTC	1 cut(s)	247
DseDI	GACNNNNNNGTC	1 cut(s)	247
Eam1104I	CTCTTC	2 cut(s)	791, 1530
EarI	CTCTTC	2 cut(s)	791, 1530
Eco130I	CCWWGG	4 cut(s)	122, 520, 1407, 1678
Eco147I	AGGCCT	1 cut(s)	95
Eco31I	GGTCTC	1 cut(s)	1061
Eco47I	GGWCC	3 cut(s)	443, 739, 1193
Eco57I	CTGAAG	5 cut(s)	291, 524, 951, 1535, 1554
EcoO109I	RGGNCCY	1 cut(s)	739
EcoRII	CCWGG	5 cut(s)	439, 892, 1048, 1189, 1864
EcoT14I	CCWWGG	4 cut(s)	122, 520, 1407, 1678
EgeI	GGCGCC	1 cut(s)	518
EheI	GGCGCC	1 cut(s)	518
ErhI	CCWWGG	4 cut(s)	122, 520, 1407, 1678
FaeI	CATG	9 cut(s)	170, 524, 650, 658, 776, 1018, 1100, 1355, 1831
FalI	AAGNNNNNCTT	2 cut(s)	1671, 1703
FaqI	GGGAC	2 cut(s)	358, 1179
FatI	CATG	9 cut(s)	166, 520, 646, 654, 772, 1014, 1096, 1351, 1827
FauI	CCCGC	1 cut(s)	42
FauNDI	CATATG	1 cut(s)	1719
Fnu4HI	GCNGC	5 cut(s)	500, 674, 1385, 1764, 1767
FokI	GGATG	3 cut(s)	525, 953, 1433
Fsp4HI	GCNGC	5 cut(s)	500, 674, 1385, 1764, 1767
FspBI	CTAG	5 cut(s)	116, 681, 1296, 1334, 1713
GlaI	GCGC	3 cut(s)	518, 579, 777
GluI	GCNGC	5 cut(s)	500, 674, 1385, 1764, 1767
GsuI	CTGGAG	2 cut(s)	1197, 1866
HaeII	RGCGCY	1 cut(s)	520
HaeIII	GGCC	5 cut(s)	95, 333, 427, 1159, 1541
HapII	CCGG	1 cut(s)	195
HhaI	GCGC	3 cut(s)	519, 580, 778
Hin1I	GRCGYC	2 cut(s)	347, 517
Hin1II	CATG	9 cut(s)	170, 524, 650, 658, 776, 1018, 1100, 1355, 1831
Hin6I	GCGC	3 cut(s)	517, 578, 776
HinP1I	GCGC	3 cut(s)	517, 578, 776
HindIII	AAGCTT	1 cut(s)	1178
HinfI	GANTC	6 cut(s)	479, 539, 551, 632, 1511, 1700
HpaII	CCGG	1 cut(s)	195
HphI	GGTGA	1 cut(s)	1607
Hpy166II	GTNNAC	3 cut(s)	231, 398, 1860
Hpy188I	TCNGA	8 cut(s)	10, 637, 814, 1087, 1230, 1534, 1567, 1726
Hpy188III	TCNNGA	8 cut(s)	452, 879, 1005, 1062, 1163, 1214, 1296, 1742
Hpy8I	GTNNAC	3 cut(s)	231, 398, 1860
HpyAV	CCTTC	9 cut(s)	143, 150, 218, 323, 403, 564, 752, 1011, 1630
HpyCH4III	ACNGT	3 cut(s)	211, 1374, 1824
HpyCH4IV	ACGT	1 cut(s)	347
HpyF10VI	GCNNNNNNNGC	5 cut(s)	584, 593, 1390, 1736, 1772
HpyF3I	CTNAG	5 cut(s)	90, 405, 636, 780, 813
HpySE526I	ACGT	1 cut(s)	347
Hsp92I	GRCGYC	2 cut(s)	347, 517
Hsp92II	CATG	9 cut(s)	170, 524, 650, 658, 776, 1018, 1100, 1355, 1831
HspAI	GCGC	3 cut(s)	517, 578, 776
KasI	GGCGCC	1 cut(s)	516
KroI	GCCGGC	1 cut(s)	194
KroNI	GCCGGC	1 cut(s)	196
LmnI	GCTCC	6 cut(s)	895, 908, 1381, 1508, 1709, 1847
Lsp1109I	GCAGC	4 cut(s)	486, 660, 1750, 1778
LweI	GCATC	6 cut(s)	553, 916, 1085, 1590, 1762, 1842
MabI	ACCWGGT	1 cut(s)	1048
MaeI	CTAG	5 cut(s)	116, 681, 1296, 1334, 1713
MaeII	ACGT	1 cut(s)	347
MaeIII	GTNAC	1 cut(s)	101
MbiI	CCGCTC	3 cut(s)	49, 1384, 1657
MflI	RGATCY	3 cut(s)	371, 1186, 1288
MhlI	GDGCHC	3 cut(s)	844, 913, 1741
Mly113I	GGCGCC	1 cut(s)	517
MlyI	GAGTC	3 cut(s)	626, 1520, 1709
MmeI	TCCRAC	1 cut(s)	1318
MroNI	GCCGGC	1 cut(s)	194
MroXI	GAANNNNTTC	2 cut(s)	462, 1731
MseI	TTAA	2 cut(s)	62, 1238
MspA1I	CMGCKG	2 cut(s)	1769, 1844
MspI	CCGG	1 cut(s)	195
MspR9I	CCNGG	5 cut(s)	441, 894, 1050, 1191, 1866
MvaI	CCWGG	5 cut(s)	441, 894, 1050, 1191, 1866
MvnI	CGCG	2 cut(s)	256, 580
MwoI	GCNNNNNNNGC	5 cut(s)	584, 593, 1390, 1736, 1772
NaeI	GCCGGC	1 cut(s)	196
NarI	GGCGCC	1 cut(s)	517
NcoI	CCATGG	1 cut(s)	520
NdeI	CATATG	1 cut(s)	1719
NgoMIV	GCCGGC	1 cut(s)	194
NlaIII	CATG	9 cut(s)	170, 524, 650, 658, 776, 1018, 1100, 1355, 1831
NlaIV	GGNNCC	3 cut(s)	518, 1047, 1195
NspI	RCATGY	1 cut(s)	776
NspV	TTCGAA	1 cut(s)	1039
PaeI	GCATGC	1 cut(s)	776
PceI	AGGCCT	1 cut(s)	95
PdiI	GCCGGC	1 cut(s)	196
PdmI	GAANNNNTTC	2 cut(s)	462, 1731
PfeI	GAWTC	3 cut(s)	479, 539, 551
PflFI	GACNNNGTC	1 cut(s)	1247
PflMI	CCANNNNNTGG	1 cut(s)	340
PfoI	TCCNGGA	1 cut(s)	439
PkrI	GCNGC	5 cut(s)	501, 675, 1386, 1765, 1768
PleI	GAGTC	3 cut(s)	626, 1519, 1708
PluTI	GGCGCC	1 cut(s)	520
PpsI	GAGTC	3 cut(s)	626, 1519, 1708
PpuMI	RGGWCCY	1 cut(s)	739
PsiI	TTATAA	2 cut(s)	768, 948
Psp5II	RGGWCCY	1 cut(s)	739
Psp6I	CCWGG	5 cut(s)	439, 892, 1048, 1189, 1864
PspGI	CCWGG	5 cut(s)	439, 892, 1048, 1189, 1864
PspN4I	GGNNCC	3 cut(s)	518, 1047, 1195
PspPI	GGNCC	4 cut(s)	443, 739, 1157, 1193
PspPPI	RGGWCCY	1 cut(s)	739
PstI	CTGCAG	1 cut(s)	1768
PstNI	CAGNNNCTG	2 cut(s)	383, 452
PsuI	RGATCY	3 cut(s)	371, 1186, 1288
PsyI	GACNNNGTC	1 cut(s)	1247
PvuII	CAGCTG	1 cut(s)	1769
RsaI	GTAC	3 cut(s)	112, 1137, 1556
RsaNI	GTAC	3 cut(s)	111, 1136, 1555
SaqAI	TTAA	2 cut(s)	62, 1238
SatI	GCNGC	5 cut(s)	500, 674, 1385, 1764, 1767
Sau96I	GGNCC	4 cut(s)	443, 739, 1157, 1193
SchI	GAGTC	3 cut(s)	626, 1520, 1709
ScrFI	CCNGG	5 cut(s)	441, 894, 1050, 1191, 1866
SduI	GDGCHC	3 cut(s)	844, 913, 1741
SexAI	ACCWGGT	1 cut(s)	1048
SfaNI	GCATC	6 cut(s)	553, 916, 1085, 1590, 1762, 1842
SfcI	CTRYAG	4 cut(s)	375, 483, 1116, 1764
SfoI	GGCGCC	1 cut(s)	518
SfuI	TTCGAA	1 cut(s)	1039
SinI	GGWCC	3 cut(s)	443, 739, 1193
SmlI	CTYRAG	1 cut(s)	1664
SmoI	CTYRAG	1 cut(s)	1664
SphI	GCATGC	1 cut(s)	776
SseBI	AGGCCT	1 cut(s)	95
SsiI	CCGC	6 cut(s)	49, 236, 256, 1384, 1657, 1842
SspDI	GGCGCC	1 cut(s)	516
SspMI	CTAG	5 cut(s)	116, 681, 1296, 1334, 1713
StuI	AGGCCT	1 cut(s)	95
StyD4I	CCNGG	5 cut(s)	439, 892, 1048, 1189, 1864
StyI	CCWWGG	4 cut(s)	122, 520, 1407, 1678
TaaI	ACNGT	3 cut(s)	211, 1374, 1824
TaiI	ACGT	1 cut(s)	350
TaqI	TCGA	6 cut(s)	568, 1039, 1267, 1690, 1874, 1909
TatI	WGTACW	1 cut(s)	1554
TauI	GCSGC	1 cut(s)	1387
TfiI	GAWTC	3 cut(s)	479, 539, 551
Tru1I	TTAA	2 cut(s)	62, 1238
Tru9I	TTAA	2 cut(s)	62, 1238
TscAI	CASTG	1 cut(s)	613
TseI	GCWGC	4 cut(s)	499, 673, 1763, 1766
TspGWI	ACGGA	4 cut(s)	48, 73, 762, 1024
TspRI	CASTG	1 cut(s)	613
Tth111I	GACNNNGTC	1 cut(s)	1247
Van91I	CCANNNNNTGG	1 cut(s)	340
VpaK11BI	GGWCC	3 cut(s)	443, 739, 1193
XapI	RAATTY	3 cut(s)	1148, 1473, 1905
XbaI	TCTAGA	1 cut(s)	1295
XceI	RCATGY	1 cut(s)	776
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1151, 1414
XmnI	GAANNNNTTC	2 cut(s)	462, 1731
XspI	CTAG	5 cut(s)	116, 681, 1296, 1334, 1713
ZraI	GACGTC	1 cut(s)	348

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.