Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7C

Orthogroup ID

OG0012025

Physical Location & Seq

Genomic Coordinates Reverse (-)

4770749 .. 4779121

Gene Structure 8373 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7CG066400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2211 bp

ATGGATTCCGACGAAGAAGACTTCGTTTTCTACGGAACGCCAATAGCGCGCGAGGATGACGTCAGCACCAGCCGGAAGAAGAAGTCCGTCGCCGAAGCCTCCGGTCAGCTCCGCACTCTCGCTCCTTGGAAGCAAGAGGTTAGAGATGAAGAAGGGAGAAGAAGATTTCACGGGGCCTTTAGCGGAGGGTTTTCTGCTGGCTACTACAATACAGTGGGATCGAAAGAGGGTTGGACACCACAGACCTTTGTGTCTTCCCGTAAGAACAGAGCTGAAGTCAAACAGCAGGACATTTTGAACTTTCTAGATGAAGATGAAAGAGCTGAATTGGAAGGTCAATCTTTGGGGACATCTTCGCAGTTTGATACATTTGGGTTTACAGCTGCAGATCATGCTCGAAAACATGCAGAAAAGGAACATCAGAAAAGGCCATCAGCTATTCCTGGACCTGTTCCTGATGAATTGGTACTTCCGGCCACAGATTCTATAGGTGTAAAGTTGCTGCTGAAGATGGGATGGCGGCGTGGTCGATCAATTAAGGATTCACATACTGATATAGCATATGATGCTCGAAGGGAGGCTAGAAAAGCTTTCTTAGCATTTTCTACTAATGATGCGAAAACACAGCTGGCTGACTCTGAACCCATTCATGATAAATCTGAGAATTTTACAGAGCAGCCTGCAAGTGATGATGTCCAGCCTTCACAAAATACACCTGTTTATGTACTGAACCCAAAGCAGGATCTGCATGGATTAGGCTTTGATCCTTTTAAGCATGCTCCTGAGTTTAGGGAAAAGAAAAGATCACGCGTATCTGATAATAGGGGCCCTGGAAACAAAAGTGCTCTTTTGATGAACAATAGTCTTTTTGGCTTCAAATCAGGAAAAGCTGCTCCTGGTTTTGGAATTGGAGCACTTGAAGATTTTGATGCTGAAGATGAGGATGTCTATGCCTCTGGCTATGACTTCGAGGAGACGTATGCTGAAGATATTGATGAGCCAACAAAATTGATCATGGATAGTAAGCAAAAGTCAGTTCAAAAGGAAGCAGGTGCTCTCTCTGGATTTAGACTTGCATCAAATTCTGACTACCAGCTTGAAAGATTTGATCCCCCTGTAGTTCCAAAGGATTTTGTACCCCATCATAAATTTCCTGGGCCTCCTGAGACTAGCTACAAGCTTGGAGATCCTGGTCCACTGGAAGTCCCACCTCCTGAGGATAATAATCTGAAACTGTTAATTGATGGGGTTGCAACTTTAGTAGCTCGATGTGGCAAATTATTTGAGGATCTCTCAAGAGAGAAAAATCAATCAAATCCATTGTTTAGTTTTCTTGTTGGAGGAAATGGTCATGAGTATTACACAAGGAAGCTGTGGGAGGAGCAACAGAAGAGAGGAGATCAAACCAAGCTGCAATTGGATGGTAAATTGTCTCCAAGAACACAGAAAATGACAGCAGAGAGTCGTGGAAAAATTTTAGGGGAAAGGCCTTTGGAGCGAAGCTCTAAGGACTTGAGTACATCAATTCCTTCTACAGATGCGATTCATCTTCAGTACAATCTTTCAGATACATTTACTGATCCCTCATCATATAGTGAGATGCCAGTAGTCGCGAAACCCTTCATACATGATACAGCAAAGCAAGAAAGATTTGAGCAGTTTCTTAAGGACAAGTACCAAGGAGGGCTTCGATCTACTGACTCTGGTAGAGCTAGTCATATGTCAGAAGCAGCTCGTGCTCTTGAGAGATTAGACTTTGAAGCTGCAGCTGAGGCAATAAAAAAAGGGAAATGGAGTAAAGAAATCTCTACATCACTTACTGGAGGGATGGAATTTACTTCTGGGGGATTTGTGCAAGCTAAAGATACTCAAGCTCAAGATGCGATCCCAAAGGAAGTCCACGTAAAACGAACAGAATATCAATGGCGTCCTTCACCTATCCTATGCAAACGGTTTGATCTGATTGATCCTTATATGGGGAAGCCAGCACCGGCTCCACGATCGAAGAGTAAAATTGAAACTCTCATTTTCACATCCGATTCTGTAAAAGCGACTAAAGAAGAAGAAACTATAATTGTAAAGAGAGACTCATATCAGATGCCTCAACCTGAGGCCCAAGGAATAAGCAAAGATGCAGCTGACAATGAAAGTGGTGGTGAGGTGGAAGTTGAAAATGTGGAGAGGCCTGTTGACCTTTACAAGGTACTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000375 GO:0000377 GO:0000398 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005681 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009888 GO:0009892 GO:0009987 GO:0010033 GO:0010087 GO:0010467 GO:0010468 GO:0010605 GO:0010608 GO:0010629 GO:0014070 GO:0016070 GO:0016071 GO:0016246 GO:0016441 GO:0016458 GO:0019222 GO:0030422 GO:0031047 GO:0031050 GO:0032502 GO:0032991 GO:0034641 GO:0035194 GO:0035195 GO:0035196 GO:0040029 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043331 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0048519 GO:0048856 GO:0050789 GO:0050896 GO:0051716 GO:0060255 GO:0065007 GO:0070878 GO:0070883 GO:0070887 GO:0070918 GO:0071013 GO:0071310 GO:0071359 GO:0071407 GO:0071704 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1901698 GO:1901699 GO:1902494 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF1604 Surp

Protein Analysis

736

Amino Acids

82.2

Weight (kDa)

5.52

Isoelectric Point (pI)

50.47

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF1604	PF07713	41 - 121	1.3e-35	Protein of unknown function (DUF1604)
Surp	PF01805	413 - 460	8.9e-12	Surp module
HTH_TGH	PF26093	519 - 595	7.9e-20	TGH-like, helix-turn-helix domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012025)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G23080 AT5G23080
fragaria_vesca	FvH4_5g12911 FvH4_5g12911
malus_domestica	MD06G1209200.v1.1 MD14G1219700.v1.1
prunus_persica	Prupe.5G214300_v2.0.a1
pyrus_communis	pycom06g18680 pycom14g18200
rosa_chinensis	RchiOBHm_Chr7g0184311
rosa_laevigata	RLG00000004987
rosa_multiflora	Rmu_co8385771.1_g000001 Rmu_co8404991.1_g000001
rosa_roxburghii	Rroxscaffold_3G00269740
rosa_samantha	Rh7AG081200 Rh7BG066100 Rh7CG066400 Rh7DG066100
rosa_wichuraiana	Rw7G005420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1040
AasI	GACNNNNNNGTC	1 cut(s)	250
AatII	GACGTC	1 cut(s)	63
Acc36I	ACCTGC	1 cut(s)	1040
AccII	CGCG	4 cut(s)	49, 51, 810, 1613
AciI	CCGC	3 cut(s)	112, 183, 520
AclWI	GGATC	9 cut(s)	226, 750, 758, 1103, 1181, 1296, 1574, 1879, 1961
AcoI	YGGCCR	1 cut(s)	474
AcsI	RAATTY	5 cut(s)	664, 1081, 1148, 1473, 1832
AcuI	CTGAAG	5 cut(s)	294, 527, 954, 1005, 1535
AcyI	GRCGYC	2 cut(s)	60, 1927
AfaI	GTAC	7 cut(s)	468, 726, 1137, 1519, 1556, 1676, 2205
AfiI	CCNNNNNNNGG	4 cut(s)	739, 902, 1976, 2200
AflII	CTTAAG	1 cut(s)	1664
AflIII	ACRYGT	1 cut(s)	808
AgsI	TTSAA	8 cut(s)	298, 877, 920, 1040, 1100, 1760, 2018, 2171
AjnI	CCWGG	5 cut(s)	442, 829, 895, 1153, 1189
AjuI	GAANNNNNNNTTGG	2 cut(s)	1671, 1703
Alw21I	GWGCWC	4 cut(s)	847, 916, 1057, 1741
Alw26I	GTCTC	4 cut(s)	968, 1160, 1437, 2079
AlwI	GGATC	9 cut(s)	226, 750, 758, 1103, 1181, 1296, 1574, 1879, 1961
AlwNI	CAGNNNCTG	1 cut(s)	745
AoxI	GGCC	8 cut(s)	174, 428, 474, 826, 1157, 1487, 2112, 2183
ApaI	GGGCCC	1 cut(s)	830
ApeKI	GCWGC	9 cut(s)	383, 502, 676, 890, 1411, 1730, 1763, 1766, 2135
ApoI	RAATTY	5 cut(s)	664, 1081, 1148, 1473, 1832
Asp700I	GAANNNNTTC	2 cut(s)	645, 1619
AspLEI	GCGC	2 cut(s)	49, 51
AspS9I	GGNCC	7 cut(s)	174, 446, 826, 827, 1157, 1193, 2113
AsuHPI	GGTGA	2 cut(s)	1926, 2168
AvaII	GGWCC	2 cut(s)	446, 1193
AxyI	CCTNAGG	2 cut(s)	1215, 2109
BaeGI	GKGCMC	1 cut(s)	830
BanII	GRGCYC	1 cut(s)	830
BauI	CACGAG	1 cut(s)	1734
BbsI	GAAGAC	2 cut(s)	24, 246
Bbv12I	GWGCWC	4 cut(s)	847, 916, 1057, 1741
BbvCI	CCTCAGC	1 cut(s)	1770
BbvI	GCAGC	9 cut(s)	370, 489, 688, 877, 1398, 1742, 1750, 1778, 2147
BccI	CCATC	7 cut(s)	439, 505, 510, 1149, 1238, 1415, 1822
BciT130I	CCWGG	5 cut(s)	444, 831, 897, 1155, 1191
BclI	TGATCA	1 cut(s)	1011
BcoDI	GTCTC	4 cut(s)	968, 1160, 1437, 2079
BfaI	CTAG	4 cut(s)	305, 582, 1170, 1713
BfmI	CTRYAG	5 cut(s)	384, 486, 1116, 1533, 1764
BfrI	CTTAAG	1 cut(s)	1664
BfuAI	ACCTGC	1 cut(s)	1040
Bme1390I	CCNGG	5 cut(s)	444, 831, 897, 1155, 1191
Bme18I	GGWCC	2 cut(s)	446, 1193
BmgT120I	GGNCC	7 cut(s)	174, 446, 826, 827, 1157, 1193, 2113
BmiI	GGNNCC	4 cut(s)	175, 827, 828, 1995
BmrFI	CCNGG	5 cut(s)	444, 831, 897, 1155, 1191
BmsI	GCATC	9 cut(s)	556, 604, 919, 1085, 1528, 1590, 1870, 2088, 2122
BpiI	GAAGAC	2 cut(s)	24, 246
BplI	GAGNNNNNCTC	4 cut(s)	1277, 1309, 1487, 1519
BpmI	CTGGAG	1 cut(s)	1842
Bpu10I	CCTNAGC	1 cut(s)	1770
BpuEI	CTTGAG	5 cut(s)	1279, 1534, 1763, 1854, 1860
BsaAI	YACGTR	1 cut(s)	1903
BsaBI	GATNNNNATC	1 cut(s)	1224
BsaHI	GRCGYC	2 cut(s)	60, 1927
BsaJI	CCNNGG	5 cut(s)	125, 829, 1154, 1678, 2116
BsaWI	WCCGGW	1 cut(s)	101
BsaXI	ACNNNNNCTCC	2 cut(s)	106, 136
Bsc4I	CCNNNNNNNGG	4 cut(s)	739, 902, 1976, 2200
Bse118I	RCCGGY	1 cut(s)	1990
Bse1I	ACTGG	3 cut(s)	1203, 1604, 1825
Bse21I	CCTNAGG	2 cut(s)	1215, 2109
Bse8I	GATNNNNATC	1 cut(s)	1224
BseBI	CCWGG	5 cut(s)	444, 831, 897, 1155, 1191
BseDI	CCNNGG	5 cut(s)	125, 829, 1154, 1678, 2116
BseGI	GGATG	6 cut(s)	61, 521, 949, 1426, 1833, 2033
BseJI	GATNNNNATC	1 cut(s)	1224
BseLI	CCNNNNNNNGG	4 cut(s)	739, 902, 1976, 2200
BseMII	CTCAG	6 cut(s)	651, 774, 1155, 1206, 1761, 2100
BseNI	ACTGG	3 cut(s)	1203, 1604, 1825
BsePI	GCGCGC	1 cut(s)	47
BseRI	GAGGAG	3 cut(s)	986, 1394, 1410
BseSI	GKGCMC	1 cut(s)	830
BseXI	GCAGC	9 cut(s)	370, 489, 688, 877, 1398, 1742, 1750, 1778, 2147
Bsh1236I	CGCG	4 cut(s)	49, 51, 810, 1613
Bsh1285I	CGRYCG	1 cut(s)	2003
BshFI	GGCC	8 cut(s)	176, 430, 476, 828, 1159, 1489, 2114, 2185
BsiEI	CGRYCG	1 cut(s)	2003
BsiHKAI	GWGCWC	4 cut(s)	847, 916, 1057, 1741
BsiSI	CCGG	4 cut(s)	73, 102, 473, 1991
BslFI	GGGAC	2 cut(s)	361, 1190
BslI	CCNNNNNNNGG	4 cut(s)	739, 902, 1976, 2200
BsmAI	GTCTC	4 cut(s)	968, 1160, 1437, 2079
BsmBI	CGTCTC	1 cut(s)	968
BsmFI	GGGAC	2 cut(s)	361, 1190
BsnI	GGCC	8 cut(s)	176, 430, 476, 828, 1159, 1489, 2114, 2185
Bsp120I	GGGCCC	1 cut(s)	826
Bsp1286I	GDGCHC	5 cut(s)	830, 847, 916, 1057, 1741
Bsp68I	TCGCGA	1 cut(s)	1613
BspACI	CCGC	3 cut(s)	112, 183, 520
BspANI	GGCC	8 cut(s)	176, 430, 476, 828, 1159, 1489, 2114, 2185
BspCNI	CTCAG	6 cut(s)	652, 775, 1156, 1207, 1762, 2101
BspFNI	CGCG	4 cut(s)	49, 51, 810, 1613
BspHI	TCATGA	2 cut(s)	649, 1351
BspLI	GGNNCC	4 cut(s)	175, 827, 828, 1995
BspMAI	CTGCAG	2 cut(s)	388, 1768
BspMI	ACCTGC	1 cut(s)	1040
BspPI	GGATC	9 cut(s)	226, 750, 758, 1103, 1181, 1296, 1574, 1879, 1961
BspTI	CTTAAG	1 cut(s)	1664
BsrFI	RCCGGY	1 cut(s)	1990
BsrI	ACTGG	3 cut(s)	1203, 1604, 1825
BssAI	RCCGGY	1 cut(s)	1990
BssECI	CCNNGG	5 cut(s)	125, 829, 1154, 1678, 2116
BssHII	GCGCGC	1 cut(s)	47
BssNI	GRCGYC	2 cut(s)	60, 1927
BssSI	CACGAG	1 cut(s)	1734
BssT1I	CCWWGG	3 cut(s)	125, 1678, 2116
Bst2BI	CACGAG	1 cut(s)	1734
Bst2UI	CCWGG	5 cut(s)	444, 831, 897, 1155, 1191
Bst4CI	ACNGT	3 cut(s)	214, 1236, 1953
Bst6I	CTCTTC	2 cut(s)	1385, 2000
BstACI	GRCGYC	2 cut(s)	60, 1927
BstAFI	CTTAAG	1 cut(s)	1664
BstAPI	GCANNNNNTGC	4 cut(s)	392, 566, 745, 1736
BstBAI	YACGTR	1 cut(s)	1903
BstC8I	GCNNGC	7 cut(s)	49, 199, 630, 681, 777, 1857, 1986
BstDEI	CTNAG	8 cut(s)	595, 660, 783, 1164, 1215, 1506, 1770, 2109
BstENI	CCTNNNNNAGG	1 cut(s)	2198
BstF5I	GGATG	6 cut(s)	61, 521, 949, 1426, 1833, 2033
BstFNI	CGCG	4 cut(s)	49, 51, 810, 1613
BstHHI	GCGC	2 cut(s)	49, 51
BstMAI	GTCTC	4 cut(s)	968, 1160, 1437, 2079
BstMCI	CGRYCG	1 cut(s)	2003
BstNI	CCWGG	5 cut(s)	444, 831, 897, 1155, 1191
BstNSI	RCATGY	2 cut(s)	407, 779
BstSCI	CCNGG	5 cut(s)	442, 829, 895, 1153, 1189
BstSFI	CTRYAG	5 cut(s)	384, 486, 1116, 1533, 1764
BstSLI	GKGCMC	1 cut(s)	830
BstUI	CGCG	4 cut(s)	49, 51, 810, 1613
BstV1I	GCAGC	9 cut(s)	370, 489, 688, 877, 1398, 1742, 1750, 1778, 2147
BstV2I	GAAGAC	2 cut(s)	24, 246
BstX2I	RGATCY	3 cut(s)	742, 1186, 1288
BstYI	RGATCY	3 cut(s)	742, 1186, 1288
Bsu36I	CCTNAGG	2 cut(s)	1215, 2109
BsuRI	GGCC	8 cut(s)	176, 430, 476, 828, 1159, 1489, 2114, 2185
BtsCI	GGATG	6 cut(s)	61, 521, 949, 1426, 1833, 2033
BtsIMutI	CAGTG	2 cut(s)	219, 1196
BtuMI	TCGCGA	1 cut(s)	1613
BveI	ACCTGC	1 cut(s)	1040
Cac8I	GCNNGC	7 cut(s)	49, 199, 630, 681, 777, 1857, 1986
CaiI	CAGNNNCTG	1 cut(s)	745
CciI	TCATGA	2 cut(s)	649, 1351
CfoI	GCGC	2 cut(s)	49, 51
Cfr10I	RCCGGY	1 cut(s)	1990
Cfr13I	GGNCC	7 cut(s)	174, 446, 826, 827, 1157, 1193, 2113
CseI	GACGC	1 cut(s)	1916
Csp6I	GTAC	7 cut(s)	467, 725, 1136, 1518, 1555, 1675, 2204
CspCI	CAANNNNNGTGG	2 cut(s)	2131, 2166
CviAII	CATG	8 cut(s)	392, 404, 650, 749, 776, 1015, 1352, 1628
CviQI	GTAC	7 cut(s)	467, 725, 1136, 1518, 1555, 1675, 2204
DdeI	CTNAG	8 cut(s)	595, 660, 783, 1164, 1215, 1506, 1770, 2109
DrdI	GACNNNNNNGTC	1 cut(s)	250
DseDI	GACNNNNNNGTC	1 cut(s)	250
EaeI	YGGCCR	1 cut(s)	474
Eam1104I	CTCTTC	2 cut(s)	1385, 2000
EarI	CTCTTC	2 cut(s)	1385, 2000
Eco130I	CCWWGG	3 cut(s)	125, 1678, 2116
Eco147I	AGGCCT	2 cut(s)	1489, 2185
Eco24I	GRGCYC	1 cut(s)	830
Eco47I	GGWCC	2 cut(s)	446, 1193
Eco57I	CTGAAG	5 cut(s)	294, 527, 954, 1005, 1535
Eco81I	CCTNAGG	2 cut(s)	1215, 2109
EcoNI	CCTNNNNNAGG	1 cut(s)	2198
EcoO109I	RGGNCCY	3 cut(s)	174, 826, 827
EcoRII	CCWGG	5 cut(s)	442, 829, 895, 1153, 1189
EcoT14I	CCWWGG	3 cut(s)	125, 1678, 2116
EcoT38I	GRGCYC	1 cut(s)	830
ErhI	CCWWGG	3 cut(s)	125, 1678, 2116
Esp3I	CGTCTC	1 cut(s)	968
FaeI	CATG	8 cut(s)	395, 407, 653, 752, 779, 1018, 1355, 1631
FalI	AAGNNNNNCTT	2 cut(s)	1671, 1703
FaqI	GGGAC	2 cut(s)	361, 1190
FatI	CATG	8 cut(s)	391, 403, 649, 748, 775, 1014, 1351, 1627
FauNDI	CATATG	2 cut(s)	562, 1719
FbaI	TGATCA	1 cut(s)	1011
FokI	GGATG	6 cut(s)	68, 528, 956, 1433, 1840, 2020
FriOI	GRGCYC	1 cut(s)	830
FspBI	CTAG	4 cut(s)	305, 582, 1170, 1713
GlaI	GCGC	2 cut(s)	48, 50
GsuI	CTGGAG	1 cut(s)	1842
HaeIII	GGCC	8 cut(s)	176, 430, 476, 828, 1159, 1489, 2114, 2185
HapII	CCGG	4 cut(s)	73, 102, 473, 1991
HgaI	GACGC	1 cut(s)	1916
HhaI	GCGC	2 cut(s)	49, 51
Hin1I	GRCGYC	2 cut(s)	60, 1927
Hin1II	CATG	8 cut(s)	395, 407, 653, 752, 779, 1018, 1355, 1631
Hin6I	GCGC	2 cut(s)	47, 49
HinP1I	GCGC	2 cut(s)	47, 49
HincII	GTYRAC	1 cut(s)	2191
HindII	GTYRAC	1 cut(s)	2191
HindIII	AAGCTT	2 cut(s)	588, 1178
HinfI	GANTC	9 cut(s)	5, 482, 542, 635, 1462, 1543, 1700, 2039, 2087
HpaII	CCGG	4 cut(s)	73, 102, 473, 1991
HphI	GGTGA	2 cut(s)	1926, 2168
Hpy166II	GTNNAC	4 cut(s)	378, 1196, 1900, 2191
Hpy8I	GTNNAC	4 cut(s)	378, 1196, 1900, 2191
Hpy99I	CGWCG	2 cut(s)	14, 92
HpyAV	CCTTC	7 cut(s)	146, 326, 567, 711, 1539, 1630, 1941
HpyCH4III	ACNGT	3 cut(s)	214, 1236, 1953
HpyCH4IV	ACGT	3 cut(s)	60, 977, 1902
HpyF3I	CTNAG	8 cut(s)	595, 660, 783, 1164, 1215, 1506, 1770, 2109
HpySE526I	ACGT	3 cut(s)	60, 977, 1902
Hsp92I	GRCGYC	2 cut(s)	60, 1927
Hsp92II	CATG	8 cut(s)	395, 407, 653, 752, 779, 1018, 1355, 1631
HspAI	GCGC	2 cut(s)	47, 49
Ksp22I	TGATCA	1 cut(s)	1011
LmnI	GCTCC	8 cut(s)	114, 127, 784, 898, 911, 1381, 1495, 1999
Lsp1109I	GCAGC	9 cut(s)	370, 489, 688, 877, 1398, 1742, 1750, 1778, 2147
LweI	GCATC	9 cut(s)	556, 604, 919, 1085, 1528, 1590, 1870, 2088, 2122
MaeI	CTAG	4 cut(s)	305, 582, 1170, 1713
MaeII	ACGT	3 cut(s)	60, 977, 1902
MfeI	CAATTG	1 cut(s)	1415
MflI	RGATCY	3 cut(s)	742, 1186, 1288
MhlI	GDGCHC	5 cut(s)	830, 847, 916, 1057, 1741
MluI	ACGCGT	1 cut(s)	808
MlyI	GAGTC	4 cut(s)	629, 1471, 1694, 2081
MmeI	TCCRAC	3 cut(s)	33, 212, 1318
MroXI	GAANNNNTTC	2 cut(s)	645, 1619
MseI	TTAA	4 cut(s)	537, 771, 1238, 1665
MspA1I	CMGCKG	4 cut(s)	383, 628, 1769, 2138
MspCI	CTTAAG	1 cut(s)	1664
MspI	CCGG	4 cut(s)	73, 102, 473, 1991
MspR9I	CCNGG	5 cut(s)	444, 831, 897, 1155, 1191
MunI	CAATTG	1 cut(s)	1415
MvaI	CCWGG	5 cut(s)	444, 831, 897, 1155, 1191
MvnI	CGCG	4 cut(s)	49, 51, 810, 1613
NdeI	CATATG	2 cut(s)	562, 1719
NlaIII	CATG	8 cut(s)	395, 407, 653, 752, 779, 1018, 1355, 1631
NlaIV	GGNNCC	4 cut(s)	175, 827, 828, 1995
NruI	TCGCGA	1 cut(s)	1613
NspI	RCATGY	2 cut(s)	407, 779
PaeI	GCATGC	1 cut(s)	779
PagI	TCATGA	2 cut(s)	649, 1351
PaqCI	CACCTGC	1 cut(s)	1040
PauI	GCGCGC	1 cut(s)	47
PceI	AGGCCT	2 cut(s)	1489, 2185
PdmI	GAANNNNTTC	2 cut(s)	645, 1619
PfeI	GAWTC	5 cut(s)	5, 482, 542, 1543, 2039
PfoI	TCCNGGA	1 cut(s)	442
Ple19I	CGATCG	1 cut(s)	2003
PleI	GAGTC	4 cut(s)	629, 1470, 1694, 2081
PpsI	GAGTC	4 cut(s)	629, 1470, 1694, 2081
Ppu21I	YACGTR	1 cut(s)	1903
Psp6I	CCWGG	5 cut(s)	442, 829, 895, 1153, 1189
PspGI	CCWGG	5 cut(s)	442, 829, 895, 1153, 1189
PspN4I	GGNNCC	4 cut(s)	175, 827, 828, 1995
PspOMI	GGGCCC	1 cut(s)	826
PspPI	GGNCC	7 cut(s)	174, 446, 826, 827, 1157, 1193, 2113
PstI	CTGCAG	2 cut(s)	388, 1768
PstNI	CAGNNNCTG	1 cut(s)	745
PsuI	RGATCY	3 cut(s)	742, 1186, 1288
PteI	GCGCGC	1 cut(s)	47
PvuI	CGATCG	1 cut(s)	2003
PvuII	CAGCTG	4 cut(s)	383, 628, 1769, 2138
RruI	TCGCGA	1 cut(s)	1613
RsaI	GTAC	7 cut(s)	468, 726, 1137, 1519, 1556, 1676, 2205
RsaNI	GTAC	7 cut(s)	467, 725, 1136, 1518, 1555, 1675, 2204
SaqAI	TTAA	4 cut(s)	537, 771, 1238, 1665
Sau96I	GGNCC	7 cut(s)	174, 446, 826, 827, 1157, 1193, 2113
SchI	GAGTC	4 cut(s)	629, 1471, 1694, 2081
ScrFI	CCNGG	5 cut(s)	444, 831, 897, 1155, 1191
SduI	GDGCHC	5 cut(s)	830, 847, 916, 1057, 1741
SfaNI	GCATC	9 cut(s)	556, 604, 919, 1085, 1528, 1590, 1870, 2088, 2122
SfcI	CTRYAG	5 cut(s)	384, 486, 1116, 1533, 1764
SinI	GGWCC	2 cut(s)	446, 1193
SmlI	CTYRAG	6 cut(s)	1294, 1513, 1664, 1742, 1869, 1875
SmoI	CTYRAG	6 cut(s)	1294, 1513, 1664, 1742, 1869, 1875
SphI	GCATGC	1 cut(s)	779
SseBI	AGGCCT	2 cut(s)	1489, 2185
SsiI	CCGC	3 cut(s)	112, 183, 520
SspMI	CTAG	4 cut(s)	305, 582, 1170, 1713
StuI	AGGCCT	2 cut(s)	1489, 2185
StyD4I	CCNGG	5 cut(s)	442, 829, 895, 1153, 1189
StyI	CCWWGG	3 cut(s)	125, 1678, 2116
TaaI	ACNGT	3 cut(s)	214, 1236, 1953
TaiI	ACGT	3 cut(s)	63, 980, 1905
TaqI	TCGA	8 cut(s)	221, 397, 529, 571, 969, 1267, 1690, 2003
TatI	WGTACW	3 cut(s)	724, 1517, 1554
TauI	GCSGC	1 cut(s)	523
TfiI	GAWTC	5 cut(s)	5, 482, 542, 1543, 2039
Tru1I	TTAA	4 cut(s)	537, 771, 1238, 1665
Tru9I	TTAA	4 cut(s)	537, 771, 1238, 1665
TscAI	CASTG	2 cut(s)	219, 1203
TseI	GCWGC	9 cut(s)	383, 502, 676, 890, 1411, 1730, 1763, 1766, 2135
TspDTI	ATGAA	9 cut(s)	162, 324, 330, 474, 638, 869, 1535, 1612, 2160
TspGWI	ACGGA	2 cut(s)	48, 76
TspRI	CASTG	2 cut(s)	219, 1203
Vha464I	CTTAAG	1 cut(s)	1664
VpaK11BI	GGWCC	2 cut(s)	446, 1193
XagI	CCTNNNNNAGG	1 cut(s)	2198
XapI	RAATTY	5 cut(s)	664, 1081, 1148, 1473, 1832
XbaI	TCTAGA	1 cut(s)	304
XceI	RCATGY	2 cut(s)	407, 779
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1414
XmnI	GAANNNNTTC	2 cut(s)	645, 1619
XspI	CTAG	4 cut(s)	305, 582, 1170, 1713
ZraI	GACGTC	1 cut(s)	61

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.