FvH4_5g14380

Plant protein of unknown function (DUF863)

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
Physical Location & Seq
Reverse (-)
8139958 .. 8146160
6203 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g14380.t10

Sequence Viewer

Length: 3219 bp
ATGCATCGGAATTCAGACTTGCTAGAAATGGAAGCTCATGTTCCATGTAACAGCTTTCCCCCAGTATATATCCCCAAAATGAATCATAACTCAAGTGCTAATGGCAGTGAGAGGAATCATAATTTAACTACTGACCAGCTTGTTGGGTATTACAAGGAGGAGTTCAAGCAGACAATGCTCAATCAAGAAATGATATTTAAAAATCAGATTCTGGACCTCCACCGCCTATATGGAAGACAGAGAGAATTAATGGGCATGACAAGGAATGAATTAGATAAACATAATCTGGGCACTGAGGCTTCAAGGCAGACTTCTTCTTTGTCTCAAACCTCGCTTGTCTGTACTCAAAAGACGTTCAACATCCCCGCATGCAGTCAATTATCTATTTCAGGTGCTGAAAATGTCCAGTTACCTTCATGTTTTGTTCAAAAGAGGAACATACAGGCATGCTCATATCCTGTTCAATCTGAAGACCATTCAGGAGACCGTAGATTTTTGAAATCTAAATGCAAGAAATCTCGGAAGAACTGGGACCTTCAACTTCCACCTGATACAATATACATTGATAGTGAAGAAGAGGAACTGTTAGAAGATGGAAAGGTTTCTGAAGCAGCTGAGGTATCAAGTTATCCTACTAAGAAAATTCCCGAGGTTGTGTGCAATGGTTATGCAACTAATGGATTCAACTCTGTTCCCAACTATGCCTCAAGTGCTGCATCATTAGAAAAAGGTCTGGTTGACTTAAATCATCGGTATGAGCTAGAGGAAGAAAGAGATTTTACATCCAATCGTTTTGTGGGGCCCACTGACATCGAGGCTTACTCAAGTATTCTACTGCAAGGCACAAAAAGCAAACAGGAGCTGTTGTTGTCTTGTAATCACAGTGCTGGGAAAATTCAAAGCAGCTTCAATACTTTCTTATATGCAGATTACTTGTCCTCGTCATCTAACTCATTACATAAGAAGCTCAAGCAACATGAACCGTCATCCCTGCTTCACAATTGCCAAAAATCATCGAGTCAAGGAGCAACGATTGGTGTTCAGAACCTCAGAAGAAATTCTGGTTCTAAAGGTGGTCATCAATCTGGACAAAGTGGAGATTTGATGTGCACATCATCTCAGCATATTCCTCGTGACTACATGGAAAATTCTGGGTCCTCATGCTTTGCAGGTTTAAGAAAACCTATACATGACTTGGCACACACCCCAATTGTCGACACCTCTATACCACTCAGTAACAACTGTAAATCATCAACACTAAGGCCTGGGCTTGAGGAAGAAAGGTTACAGTTAAAGAAGCATCTGAGGTCTAGTACAACACATGATGGTACGGTCGCTGACAGTAGCTTTATCAATGGCTTTTATTTAGAATCCAACAACTCAGGGGATCAGCCACCAACCATTGGTTGTGATAATCTGATAAGAGTTAAAGATGGTTTAGTGCCTGAACTTCATGGAATGACCAGATACATGCAGGATTCTGCAAATGTCAATGCTCAAAAGGACATAGACTTGAATTTCATGCCTTCTAGCTGTTCTTTGGATGTGGCAGTTTCCCAGAGTTTCCAAACACTTGGAACAGAAAAGCATGAAGGTTCTAAAAGAGCTGTGCTACTTGATTTAAATGTGCCTCATGATTCGGTATGGGTCAAAGAAGCAGAATTAACTGCTGATGAACATGTAGAAAAGAGTAAATTCAAGAAAGATGGTCCTGGAGTTCAAATTGACCTGAACTCATCCATAAATGATGTTGAGTTTGGAGTTCAGATTGACCTGAACGCATCCATAAATGAAGATGAGTTTTCAGCAATATCATCTCCTTCGACAGAGAGCCTTTTGGAGGCACCTGCTAGTCCAGAGAACAAGGAGTGTTCTCCACCAAGAGGCGTCTCATCTGATGGAAATCAAGTTGACACACCTGATCTAATGTCAGGACTGGAAGCTCCAGAAAACAAGGAGTCTTCTCCACCTACAGGAGAACCTGATGAAGATCATGTTGAGATACCTATTCCATTGTCAGTACAGGAAGATTTTCAATACAAGGTGTGTGCTCAGCCAACAGAATCTGATGAACAAGTTGACGCACCATGTCCACTGTCAGTACCTGAAGATCTAGAACGTATGGTGTGTTATGGGCCAACAGAATCTGATGAACATATTGACAGACCTATTGCATTGTCAGGGCAGGGAGGTCTGCAGAACAAAGAGTGTTCTCAGCCCATAGAATTTGATGAAAATCAAATTGAGACACCTTTTCCGTTGTCAAACATGGAAAACAAAGATTGTTCTCAGACTATGGATTCTGATGAAAATCAATTTGAGACACATTTACCATCAGGACTAGATGATCTGGAGTGCAAAGATTGTTCTCAGCCTATGGACTCTGATGAAACTCATATTTGGACACCTTTGCCATTGTCAGGACATGACGATCTGGAAACCAAAGAGTGTTCACAGCCAATGGGCTCTACTGAAAAACAAATTGGCACACCTGTTCAATTGTCAGGACATGAAGTGCATCTGGAAGAGGAAATGTTCAGGACTGCAGCAGAATGTTTGGTTTCCATTTCATCATCCGTGTGTCATACTTGTTCTGAGAGGACCACCGGTAAACCAACTAAAACTTTATTTAATTCCCTAAAGTGGTTTGCTGGTTTAGCGTCTTCAGTTTTAGGCAGTCTAGAACACAAGGTGGGCTGTGATGATAATCAGGTGGTTCTACCTGATGGAATGGACTACTTTGAGGCCATGACATTGATGCTACCAGAGAAAAAGGTGGAAGAGAGCTGCTGCTGTAGAGGTAATGACTACAAAGAGGAAGTGATCGTGACAGCTTCATCACAAAGTCAGCCAAAAAAGGGTCGACCAAGAAAAGGAATGCAGTGGACGAAGAACTTCCAAAAGGAAGTTCTCCCGGGCCTTGAATCTTTGTCAAGATGTGAGGTGAGTGAGGATCTTCAGATCATAGGAACACTAATTGAGGCTTCTGCTGATTGCTCCGAAACAAGATCAGTAAGATATGCAGCTAAATTTGGGTTGACAAGGGGGAGGAGGAAGTGCACCATTTCTGCTTCCAATGTAAAAGAGAGTACTGCCGCATCACCATTGAATCACATTGGTGTTAAACGGCAATTGGAAAGGGAGAGGAGAAGCCTAATTGATTGGGGGGAGGTAACCAGGGGGCGTAGAGGGCAGAGAAATCTGGGTAGCAAGGTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1073

Amino Acids

118.7

Weight (kDa)

5.1

Isoelectric Point (pI)

57.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF863 PF05904 115 - 321 1.7e-08 Plant protein of unknown function (DUF863)
DUF863 PF05904 798 - 1044 2e-48 Plant protein of unknown function (DUF863)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1855
Acc36I ACCTGC 2 cut(s) 1160, 1855
AccB1I GGYRCC 1 cut(s) 1843
AccB7I CCANNNNNTGG 1 cut(s) 1403
AccI GTMKAC 2 cut(s) 1215, 2863
AciI CCGC 3 cut(s) 223, 366, 3096
AclWI GGATC 2 cut(s) 1395, 2961
AcsI RAATTY 9 cut(s) 10, 642, 894, 1057, 1147, 1516, 1694, 2225, 3029
AcuI CTGAAG 5 cut(s) 489, 627, 2127, 2649, 2942
AcyI GRCGYC 1 cut(s) 1887
AdeI CACNNNGTG 1 cut(s) 2692
AfaI GTAC 6 cut(s) 343, 1315, 1330, 2022, 2103, 3091
AfiI CCNNNNNNNGG 8 cut(s) 1403, 1840, 1883, 1973, 2420, 2643, 2858, 2873
AflIII ACRYGT 1 cut(s) 1678
AgeI ACCGGT 1 cut(s) 2606
AjnI CCWGG 3 cut(s) 1264, 1711, 3176
AjuI GAANNNNNNNTTGG 4 cut(s) 2466, 2498, 2892, 2924
AleI CACNNNNGTG 1 cut(s) 3117
Alw21I GWGCWC 3 cut(s) 1112, 2053, 3062
Alw26I GTCTC 5 cut(s) 327, 477, 1894, 2240, 2315
Alw44I GTGCAC 2 cut(s) 1108, 3058
AlwI GGATC 2 cut(s) 1395, 2961
AlwNI CAGNNNCTG 6 cut(s) 211, 395, 862, 2066, 2105, 2147
Ama87I CYCGRG 2 cut(s) 647, 2914
AoxI GGCC 5 cut(s) 800, 1262, 2135, 2745, 2917
ApaI GGGCCC 1 cut(s) 804
ApaLI GTGCAC 2 cut(s) 1108, 3058
ApeKI GCWGC 7 cut(s) 611, 713, 903, 2546, 2787, 2790, 3023
ApoI RAATTY 9 cut(s) 10, 642, 894, 1057, 1147, 1516, 1694, 2225, 3029
ArsI GACNNNNNNTTYG 2 cut(s) 301, 333
AseI ATTAAT 1 cut(s) 248
AsiGI ACCGGT 1 cut(s) 2606
Asp700I GAANNNNTTC 4 cut(s) 601, 1057, 2031, 2894
AspS9I GGNCC 9 cut(s) 214, 532, 800, 801, 1155, 1709, 2135, 2601, 2917
AsuC2I CCSGG 2 cut(s) 2915, 2916
AsuHPI GGTGA 2 cut(s) 2956, 3093
AvaI CYCGRG 2 cut(s) 647, 2914
AvaII GGWCC 5 cut(s) 214, 532, 1155, 1709, 2601
BaeGI GKGCMC 4 cut(s) 293, 804, 1112, 3062
BanI GGYRCC 1 cut(s) 1843
BanII GRGCYC 2 cut(s) 804, 2468
BarI GAAGNNNNNNTAC 2 cut(s) 1269, 1301
BauI CACGAG 1 cut(s) 1131
BbsI GAAGAC 4 cut(s) 241, 477, 1953, 2655
Bbv12I GWGCWC 3 cut(s) 1112, 2053, 3062
BbvCI CCTCAGC 1 cut(s) 615
BbvI GCAGC 7 cut(s) 623, 700, 915, 2558, 2774, 2777, 3035
BccI CCATC 7 cut(s) 587, 1319, 1427, 1700, 1892, 2341, 2720
BceAI ACGGC 1 cut(s) 3143
BcgI CGANNNNNNTGC 2 cut(s) 1112, 1146
BciT130I CCWGG 3 cut(s) 1266, 1713, 3178
BcnI CCSGG 2 cut(s) 2915, 2916
BcoDI GTCTC 5 cut(s) 327, 477, 1894, 2240, 2315
BfaI CTAG 8 cut(s) 23, 761, 1311, 1530, 1851, 2114, 2342, 2681
BfmI CTRYAG 4 cut(s) 1971, 2195, 2544, 2794
BfuAI ACCTGC 2 cut(s) 1160, 1855
BglII AGATCT 1 cut(s) 2110
BisI GCNGC 8 cut(s) 612, 714, 904, 2547, 2788, 2791, 3024, 3096
BlpI GCTNAGC 1 cut(s) 2052
BlsI GCNGC 8 cut(s) 613, 715, 905, 2548, 2789, 2792, 3025, 3097
BmcAI AGTACT 1 cut(s) 3091
Bme1390I CCNGG 5 cut(s) 1266, 1713, 2915, 2916, 3178
Bme18I GGWCC 5 cut(s) 214, 532, 1155, 1709, 2601
BmeT110I CYCGRG 2 cut(s) 647, 2914
BmgT120I GGNCC 9 cut(s) 214, 532, 800, 801, 1155, 1709, 2135, 2601, 2917
BmiI GGNNCC 5 cut(s) 533, 801, 802, 1156, 1845
BmrFI CCNGG 5 cut(s) 1266, 1713, 2915, 2916, 3178
BmrI ACTGGG 2 cut(s) 56, 538
BmsI GCATC 7 cut(s) 13, 725, 1309, 1790, 2527, 2748, 3107
BmuI ACTGGG 2 cut(s) 56, 538
BpiI GAAGAC 4 cut(s) 241, 477, 1953, 2655
BplI GAGNNNNNCTC 2 cut(s) 806, 838
BpmI CTGGAG 3 cut(s) 1734, 1929, 2372
Bpu10I CCTNAGC 1 cut(s) 615
Bpu1102I GCTNAGC 1 cut(s) 2052
BpuEI CTTGAG 5 cut(s) 76, 691, 808, 953, 1292
BpuMI CCSGG 2 cut(s) 2915, 2916
BsaBI GATNNNNATC 5 cut(s) 1902, 1989, 2235, 2310, 2706
BsaHI GRCGYC 1 cut(s) 1887
BsaI GGTCTC 1 cut(s) 477
BsaJI CCNNGG 4 cut(s) 648, 1265, 2914, 3177
BsaWI WCCGGW 1 cut(s) 2606
BsaXI ACNNNNNCTCC 2 cut(s) 851, 881
Bsc4I CCNNNNNNNGG 8 cut(s) 1403, 1840, 1883, 1973, 2420, 2643, 2858, 2873
Bse118I RCCGGY 1 cut(s) 2606
Bse1I ACTGG 4 cut(s) 62, 406, 533, 1941
Bse3DI GCAATG 1 cut(s) 667
Bse8I GATNNNNATC 5 cut(s) 1902, 1989, 2235, 2310, 2706
BseBI CCWGG 3 cut(s) 1266, 1713, 3178
BseDI CCNNGG 4 cut(s) 648, 1265, 2914, 3177
BseGI GGATG 7 cut(s) 360, 782, 986, 1549, 1736, 1781, 2573
BseJI GATNNNNATC 5 cut(s) 1902, 1989, 2235, 2310, 2706
BseLI CCNNNNNNNGG 8 cut(s) 1403, 1840, 1883, 1973, 2420, 2643, 2858, 2873
BseMI GCAATG 1 cut(s) 667
BseNI ACTGG 4 cut(s) 62, 406, 533, 1941
BseRI GAGGAG 3 cut(s) 173, 3064, 3160
BseSI GKGCMC 4 cut(s) 293, 804, 1112, 3062
BseXI GCAGC 7 cut(s) 623, 700, 915, 2558, 2774, 2777, 3035
BseYI CCCAGC 1 cut(s) 887
Bsh1285I CGRYCG 1 cut(s) 1335
BshFI GGCC 5 cut(s) 802, 1264, 2137, 2747, 2919
BshNI GGYRCC 1 cut(s) 1843
BshTI ACCGGT 1 cut(s) 2606
BsiEI CGRYCG 1 cut(s) 1335
BsiHKAI GWGCWC 3 cut(s) 1112, 2053, 3062
BsiHKCI CYCGRG 2 cut(s) 647, 2914
BsiSI CCGG 2 cut(s) 2607, 2915
BslFI GGGAC 1 cut(s) 545
BslI CCNNNNNNNGG 8 cut(s) 1403, 1840, 1883, 1973, 2420, 2643, 2858, 2873
BsmAI GTCTC 5 cut(s) 327, 477, 1894, 2240, 2315
BsmBI CGTCTC 1 cut(s) 1894
BsmFI GGGAC 1 cut(s) 545
BsmI GAATGC 1 cut(s) 2883
BsnI GGCC 5 cut(s) 802, 1264, 2137, 2747, 2919
Bso31I GGTCTC 1 cut(s) 477
BsoBI CYCGRG 2 cut(s) 647, 2914
Bsp120I GGGCCC 1 cut(s) 800
Bsp1286I GDGCHC 6 cut(s) 293, 804, 1112, 2053, 2468, 3062
Bsp1720I GCTNAGC 1 cut(s) 2052
BspACI CCGC 3 cut(s) 223, 366, 3096
BspANI GGCC 5 cut(s) 802, 1264, 2137, 2747, 2919
BspHI TCATGA 1 cut(s) 1633
BspLI GGNNCC 5 cut(s) 533, 801, 802, 1156, 1845
BspMAI CTGCAG 2 cut(s) 2199, 2548
BspMI ACCTGC 2 cut(s) 1160, 1855
BspPI GGATC 2 cut(s) 1395, 2961
BspT107I GGYRCC 1 cut(s) 1843
BspTNI GGTCTC 1 cut(s) 477
BsrDI GCAATG 1 cut(s) 667
BsrFI RCCGGY 1 cut(s) 2606
BsrI ACTGG 4 cut(s) 62, 406, 533, 1941
BssAI RCCGGY 1 cut(s) 2606
BssECI CCNNGG 4 cut(s) 648, 1265, 2914, 3177
BssNI GRCGYC 1 cut(s) 1887
BssSI CACGAG 1 cut(s) 1131
Bst2BI CACGAG 1 cut(s) 1131
Bst2UI CCWGG 3 cut(s) 1266, 1713, 3178
Bst4CI ACNGT 9 cut(s) 488, 585, 884, 984, 1244, 1290, 1333, 1343, 2097
Bst6I CTCTTC 3 cut(s) 570, 2520, 2775
BstACI GRCGYC 1 cut(s) 1887
BstAPI GCANNNNNTGC 1 cut(s) 175
BstC8I GCNNGC 2 cut(s) 370, 448
BstEII GGTNACC 1 cut(s) 3172
BstENI CCTNNNNNAGG 1 cut(s) 1838
BstF5I GGATG 7 cut(s) 360, 782, 986, 1549, 1736, 1781, 2573
BstMAI GTCTC 5 cut(s) 327, 477, 1894, 2240, 2315
BstMCI CGRYCG 1 cut(s) 1335
BstMWI GCNNNNNNNGC 5 cut(s) 175, 710, 849, 2657, 3190
BstNI CCWGG 3 cut(s) 1266, 1713, 3178
BstNSI RCATGY 4 cut(s) 372, 450, 1474, 1682
BstPI GGTNACC 1 cut(s) 3172
BstSCI CCNGG 5 cut(s) 1264, 1711, 2913, 2914, 3176
BstSFI CTRYAG 4 cut(s) 1971, 2195, 2544, 2794
BstSLI GKGCMC 4 cut(s) 293, 804, 1112, 3062
BstV1I GCAGC 7 cut(s) 623, 700, 915, 2558, 2774, 2777, 3035
BstV2I GAAGAC 4 cut(s) 241, 477, 1953, 2655
BstX2I RGATCY 2 cut(s) 2110, 2953
BstXI CCANNNNNNTGG 2 cut(s) 143, 1574
BstYI RGATCY 2 cut(s) 2110, 2953
BsuRI GGCC 5 cut(s) 802, 1264, 2137, 2747, 2919
BtsCI GGATG 7 cut(s) 360, 782, 986, 1549, 1736, 1781, 2573
BtsI GCAGTG 2 cut(s) 112, 2888
BtsIMutI CAGTG 6 cut(s) 112, 291, 804, 889, 2093, 2888
BveI ACCTGC 2 cut(s) 1160, 1855
Cac8I GCNNGC 2 cut(s) 370, 448
CaiI CAGNNNCTG 6 cut(s) 211, 395, 862, 2066, 2105, 2147
CciI TCATGA 1 cut(s) 1633
Cfr10I RCCGGY 1 cut(s) 2606
Cfr13I GGNCC 9 cut(s) 214, 532, 800, 801, 1155, 1709, 2135, 2601, 2917
Cfr9I CCCGGG 1 cut(s) 2914
CseI GACGC 3 cut(s) 1876, 2090, 2649
Csp6I GTAC 6 cut(s) 342, 1314, 1329, 2021, 2102, 3090
CspAI ACCGGT 1 cut(s) 2606
CviQI GTAC 6 cut(s) 342, 1314, 1329, 2021, 2102, 3090
DraI TTTAAA 2 cut(s) 199, 1623
DraIII CACNNNGTG 1 cut(s) 2692
Eam1104I CTCTTC 3 cut(s) 570, 2520, 2775
EarI CTCTTC 3 cut(s) 570, 2520, 2775
Eco147I AGGCCT 1 cut(s) 1264
Eco24I GRGCYC 2 cut(s) 804, 2468
Eco31I GGTCTC 1 cut(s) 477
Eco47I GGWCC 5 cut(s) 214, 532, 1155, 1709, 2601
Eco57I CTGAAG 5 cut(s) 489, 627, 2127, 2649, 2942
Eco88I CYCGRG 2 cut(s) 647, 2914
Eco91I GGTNACC 1 cut(s) 3172
EcoNI CCTNNNNNAGG 1 cut(s) 1838
EcoO109I RGGNCCY 3 cut(s) 532, 800, 1155
EcoO65I GGTNACC 1 cut(s) 3172
EcoRI GAATTC 1 cut(s) 10
EcoRII CCWGG 3 cut(s) 1264, 1711, 3176
EcoT22I ATGCAT 1 cut(s) 6
EcoT38I GRGCYC 2 cut(s) 804, 2468
Esp3I CGTCTC 1 cut(s) 1894
FalI AAGNNNNNCTT 2 cut(s) 295, 327
FaqI GGGAC 1 cut(s) 545
FauI CCCGC 1 cut(s) 373
FblI GTMKAC 2 cut(s) 1215, 2863
Fnu4HI GCNGC 8 cut(s) 612, 714, 904, 2547, 2788, 2791, 3024, 3096
FokI GGATG 7 cut(s) 347, 769, 973, 1556, 1723, 1768, 2560
FriOI GRGCYC 2 cut(s) 804, 2468
Fsp4HI GCNGC 8 cut(s) 612, 714, 904, 2547, 2788, 2791, 3024, 3096
FspBI CTAG 8 cut(s) 23, 761, 1311, 1530, 1851, 2114, 2342, 2681
GluI GCNGC 8 cut(s) 612, 714, 904, 2547, 2788, 2791, 3024, 3096
GsaI CCCAGC 1 cut(s) 891
GsuI CTGGAG 3 cut(s) 1734, 1929, 2372
HaeIII GGCC 5 cut(s) 802, 1264, 2137, 2747, 2919
HapII CCGG 2 cut(s) 2607, 2915
HgaI GACGC 3 cut(s) 1876, 2090, 2649
Hin1I GRCGYC 1 cut(s) 1887
HincII GTYRAC 6 cut(s) 739, 1216, 1912, 2080, 2864, 3039
HindII GTYRAC 6 cut(s) 739, 1216, 1912, 2080, 2864, 3039
HpaII CCGG 2 cut(s) 2607, 2915
HphI GGTGA 2 cut(s) 2956, 3093
HpyAV CCTTC 5 cut(s) 423, 545, 1536, 1586, 1830
HpyCH4III ACNGT 9 cut(s) 488, 585, 884, 984, 1244, 1290, 1333, 1343, 2097
HpyCH4IV ACGT 2 cut(s) 353, 2119
HpyF10VI GCNNNNNNNGC 5 cut(s) 175, 710, 849, 2657, 3190
HpySE526I ACGT 2 cut(s) 353, 2119
Hsp92I GRCGYC 1 cut(s) 1887
LmnI GCTCC 4 cut(s) 859, 1025, 1948, 3002
Lsp1109I GCAGC 7 cut(s) 623, 700, 915, 2558, 2774, 2777, 3035
LweI GCATC 7 cut(s) 13, 725, 1309, 1790, 2527, 2748, 3107
MaeI CTAG 8 cut(s) 23, 761, 1311, 1530, 1851, 2114, 2342, 2681
MaeII ACGT 2 cut(s) 353, 2119
MaeIII GTNAC 7 cut(s) 47, 408, 1133, 1235, 1284, 2827, 3172
MfeI CAATTG 4 cut(s) 1000, 1209, 2498, 3131
MflI RGATCY 2 cut(s) 2110, 2953
MhlI GDGCHC 6 cut(s) 293, 804, 1112, 2053, 2468, 3062
MlyI GAGTC 3 cut(s) 1027, 1967, 2375
MmeI TCCRAC 1 cut(s) 1398
Mph1103I ATGCAT 1 cut(s) 6
MroXI GAANNNNTTC 4 cut(s) 601, 1057, 2031, 2894
MslI CAYNNNNRTG 3 cut(s) 753, 2578, 3117
MspA1I CMGCKG 1 cut(s) 614
MspI CCGG 2 cut(s) 2607, 2915
MspR9I CCNGG 5 cut(s) 1266, 1713, 2915, 2916, 3178
MunI CAATTG 4 cut(s) 1000, 1209, 2498, 3131
Mva1269I GAATGC 1 cut(s) 2883
MvaI CCWGG 3 cut(s) 1266, 1713, 3178
MwoI GCNNNNNNNGC 5 cut(s) 175, 710, 849, 2657, 3190
NciI CCSGG 2 cut(s) 2915, 2916
NlaIV GGNNCC 5 cut(s) 533, 801, 802, 1156, 1845
NmuCI GTSAC 2 cut(s) 1133, 2827
NsiI ATGCAT 1 cut(s) 6
NspI RCATGY 4 cut(s) 372, 450, 1474, 1682
OliI CACNNNNGTG 1 cut(s) 3117
PaeI GCATGC 2 cut(s) 372, 450
PagI TCATGA 1 cut(s) 1633
PaqCI CACCTGC 1 cut(s) 1855
PceI AGGCCT 1 cut(s) 1264
PciI ACATGT 1 cut(s) 1678
PctI GAATGC 1 cut(s) 2883
PdmI GAANNNNTTC 4 cut(s) 601, 1057, 2031, 2894
PflMI CCANNNNNTGG 1 cut(s) 1403
PfoI TCCNGGA 1 cut(s) 1711
PinAI ACCGGT 1 cut(s) 2606
PkrI GCNGC 8 cut(s) 613, 715, 905, 2548, 2789, 2792, 3025, 3097
PleI GAGTC 3 cut(s) 1026, 1966, 2375
PpsI GAGTC 3 cut(s) 1026, 1966, 2375
PpuMI RGGWCCY 2 cut(s) 532, 1155
PscI ACATGT 1 cut(s) 1678
PshBI ATTAAT 1 cut(s) 248
Psp5II RGGWCCY 2 cut(s) 532, 1155
Psp6I CCWGG 3 cut(s) 1264, 1711, 3176
PspEI GGTNACC 1 cut(s) 3172
PspFI CCCAGC 1 cut(s) 887
PspGI CCWGG 3 cut(s) 1264, 1711, 3176
PspN4I GGNNCC 5 cut(s) 533, 801, 802, 1156, 1845
PspOMI GGGCCC 1 cut(s) 800
PspPI GGNCC 9 cut(s) 214, 532, 800, 801, 1155, 1709, 2135, 2601, 2917
PspPPI RGGWCCY 2 cut(s) 532, 1155
PstI CTGCAG 2 cut(s) 2199, 2548
PstNI CAGNNNCTG 6 cut(s) 211, 395, 862, 2066, 2105, 2147
PsuI RGATCY 2 cut(s) 2110, 2953
PvuII CAGCTG 1 cut(s) 614
RsaI GTAC 6 cut(s) 343, 1315, 1330, 2022, 2103, 3091
RsaNI GTAC 6 cut(s) 342, 1314, 1329, 2021, 2102, 3090
RseI CAYNNNNRTG 3 cut(s) 753, 2578, 3117
SalI GTCGAC 2 cut(s) 1214, 2862
SatI GCNGC 8 cut(s) 612, 714, 904, 2547, 2788, 2791, 3024, 3096
Sau96I GGNCC 9 cut(s) 214, 532, 800, 801, 1155, 1709, 2135, 2601, 2917
ScaI AGTACT 1 cut(s) 3091
SchI GAGTC 3 cut(s) 1027, 1967, 2375
ScrFI CCNGG 5 cut(s) 1266, 1713, 2915, 2916, 3178
SduI GDGCHC 6 cut(s) 293, 804, 1112, 2053, 2468, 3062
SfaNI GCATC 7 cut(s) 13, 725, 1309, 1790, 2527, 2748, 3107
SfcI CTRYAG 4 cut(s) 1971, 2195, 2544, 2794
SinI GGWCC 5 cut(s) 214, 532, 1155, 1709, 2601
SmaI CCCGGG 1 cut(s) 2916
SmiI ATTTAAAT 1 cut(s) 1623
SmiMI CAYNNNNRTG 3 cut(s) 753, 2578, 3117
SmlI CTYRAG 5 cut(s) 91, 706, 823, 968, 1271
SmoI CTYRAG 5 cut(s) 91, 706, 823, 968, 1271
SphI GCATGC 2 cut(s) 372, 450
SseBI AGGCCT 1 cut(s) 1264
SsiI CCGC 3 cut(s) 223, 366, 3096
SspMI CTAG 8 cut(s) 23, 761, 1311, 1530, 1851, 2114, 2342, 2681
StuI AGGCCT 1 cut(s) 1264
StyD4I CCNGG 5 cut(s) 1264, 1711, 2913, 2914, 3176
SwaI ATTTAAAT 1 cut(s) 1623
TaaI ACNGT 9 cut(s) 488, 585, 884, 984, 1244, 1290, 1333, 1343, 2097
TaiI ACGT 2 cut(s) 356, 2122
TaqI TCGA 5 cut(s) 813, 1016, 1215, 1823, 2863
TatI WGTACW 4 cut(s) 341, 1313, 2020, 3089
TauI GCSGC 1 cut(s) 3098
TscAI CASTG 6 cut(s) 112, 298, 811, 889, 2100, 2888
TseFI GTSAC 2 cut(s) 1133, 2827
TseI GCWGC 7 cut(s) 611, 713, 903, 2546, 2787, 2790, 3023
Tsp45I GTSAC 2 cut(s) 1133, 2827
TspGWI ACGGA 2 cut(s) 2247, 2566
TspMI CCCGGG 1 cut(s) 2914
TspRI CASTG 6 cut(s) 112, 298, 811, 889, 2100, 2888
Van91I CCANNNNNTGG 1 cut(s) 1403
VneI GTGCAC 2 cut(s) 1108, 3058
VpaK11BI GGWCC 5 cut(s) 214, 532, 1155, 1709, 2601
VspI ATTAAT 1 cut(s) 248
XagI CCTNNNNNAGG 1 cut(s) 1838
XapI RAATTY 9 cut(s) 10, 642, 894, 1057, 1147, 1516, 1694, 2225, 3029
XbaI TCTAGA 2 cut(s) 2113, 2680
XceI RCATGY 4 cut(s) 372, 450, 1474, 1682
XcmI CCANNNNNNNNNTGG 2 cut(s) 227, 793
XmaI CCCGGG 1 cut(s) 2914
XmiI GTMKAC 2 cut(s) 1215, 2863
XmnI GAANNNNTTC 4 cut(s) 601, 1057, 2031, 2894
XspI CTAG 8 cut(s) 23, 761, 1311, 1530, 1851, 2114, 2342, 2681
ZrmI AGTACT 1 cut(s) 3091
Zsp2I ATGCAT 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.