RLG00000005135

Plant protein of unknown function (DUF863)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
OG0003065
Physical Location & Seq
Reverse (-)
65290267 .. 65295387
5121 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000005135

Sequence Viewer

Length: 3492 bp
ATGTATAAGAATTCAGACTTGCTGGAAATGGGAGCTCATATTCCATGCAGCAGCTATGCCCCAGTATATATCCCCACAATGAATCATAACTTAAGTGCTAATGGCAGTGAGAGGAATCATAATTTGACTTCTGACCAGCTTTTTTGGTATTACAAGGAGGTGTTCAAGCAGACAATGCTCAATCAAGAAATGATATTTAAGGATCAGATTCTGGACCTCCACCGCCTTTATGGAAGACAAAGAGAACTAATGGATGATATAACAAGGAATGAATTAGATAAACATAATCGGGGCACCGAGGTTTCAAGGCGGACTACTTCTTTGTCTCATACTTCTCTTGTCTGTGCTCAAAAGACATTCAACATCCCTGCATGCAGTCAAGTATCTATTTCAGGTGCTGAAAATATCCAGTCACCTTCATGTTTTCTTCAAGGGAGGAACGTACGGGCATTCTCTTATCCTGCTCAAACTGAAGGCCATTCAGGAGTCCGTGAATTTTTGAAATCCAAATGCAAGAAACCTCGGAAGAACTTGGACCTTCGACTTCCAGCTGATACAATATACATTGATAGTGAAGAAGAGGAATTGTTAGAAGACAGAAAGGTTTCTGAAGCAGCTGAGGTATCAAGTTATCCTACTAAGAGAATTCCCGAGGTTGTTTGTAATGGTGATGCAACTAATGGATTCAACTCCGTTTCCAATTATGCCTCCAGTGCTGCATCATTAGAAAAGGGTTGGGTTGACTTAAATTATCTGTATAAGCTACAGGAAAAAACAGCTCCTGCATCCGATAGTTTTGAGGGGCCCACTGCTGTCGAAGCTTACTCAAATATTCTACTGCAAGGCACAGAAAGCAAACAGGAGTGGTTGTCATCTTATAATTACAATGCTGGGAAAATTCAAAGCAGCTTGTATTCTTTGCCTCGAGGATTTCATGCAGATGACATATCCTCGTCATCTAACTCATTACATAAGAAGCTTGCGCAACAGGAACCGTCATCCTTTCTTCACAATCACCAAAATTCGTCGAGTGAAAGAGCAATTATTGGTGTTCAAAACTTCAGAAGAAATTCTGAAACTAAAAATGATCATCAATCTGGACCAAGTGGAGCTTTGCTGTGCACATCATCCCAACATATTCCTCGTGACTGCACGGAAAATTCTGGGTCGTCGGGCATTGCTGCTTTAAGAAAACCTATGCATGACTTGGCACGTACCCAGATTGCAGTTCAAGCACTCCCATGTCTTAACACCTCTATACCACTCAGTAATAACTGTAAATCATCAACATTAAGGCATGGGCTTGAGGAAGAAAGGTTACAGTTGAAGAAGCATCTGAGGTCTAGTACAAAACATGATGGTACGGTCTCTGACAGTAGCTTTAGCAATGGCTTTGATTTAGAATCCAACAAATCAGGGGCCCAGCCACCATCCATCAGTTCTGATAATCTGATAAGGGTTAATGACGGTTTAGTGCCTGAACTTCATGGAATTACCAGATACCTGCAGGATTCTGCAAATGTCAATGCTCGGAAGGATATAGACTTGAATTTCATGCCTTCTAGCTGTACTTCGGATGCAGCAGTTTCCCAGAGTTTCCAAACAACTGGAACAGAAAAGCTTGAAGATTCTAATGAGAGGTTTCCTTTGCATAGACCAAAACTTGATTATTATGGGAAAACTGATAAAGGATGTGAAGATTCAAATCAGGCAGAGGCAAGTGACTTCTTGAGTCAACAGATTCATGGGTCTCCTACTTGTGAGACACCTAACATTTCTGGTGATCACTGTTATCATGTCTCAGGCTCCAATCACCATCAGAACTCAGTTCAAGATATCAAGGACAGCAAAAGAGCTGTGCTACTTGATTTAAATGTGCCTTGTGATTCTGTGCACAACAAAGAAGTAGAACTAACTGTTGATGAACATGTGGAAAAGAGTAAATTTAAGAAAGATGCAGGTTTTGGAGTTCACATTGACCTGAACTCATCCATAAATGATGTAGGTTTTGGAGTTCACATTGACCTGAATACATCCGTAAATGAAGATGAGTTTTCAGCAATGTCATCCCCTTCAACAGAGAGTCTTTTGGAGGCACCTGCTAGTCCAGAAAACAAAGAGTGTTCTCCACCGAGAGGCGTCTCATCTGATGGAAATCAAGTTGACACACCTGATCTAATGTCAGGACTGGAAGCTCCAGAAAACAAGGAGTCTTCTCCACCTACAGGAGAATCTGATGAAAATCATGTTGAGATACCTTTTCCATTGTCAGTACAGGAAGATCTCGAACATAAGGTGTGTTCTCAGCCAACAGAATCTGATGAAAAAGTTGACACACCATCTCGATTGTCAGTACACGAAGATCTCGAACATAAGGTGTGTTCTAGGCCAACAGAATCTGATGAACAAATTGAGACACCTTTTGCATTGTCAGGGCAGGGAGGTCTGCAGAACAAAGAGTGTTCTCAGCCAATAGAATCTGATGAAAATCAAAGTGTGACACCTTTGCCATTGTCAAATATGGAAAGCAAAGATTGTTCTAAGCCTATGGATTCTGATGAAAATCAAATTGAGACACCTTTTCCATCAGGACTGGATGATCTGCAGAGCAAAGCTTGTTCTCAGCCTATGGACTCTGATGAAACTCAAATTCAGACACCTTTGCCATTGTCAGGACAGGAAAATCTGGAAACCAAAGAGTGTTCACAGCCAATGGACTCTACTGAAAAACAAATTGAGACACCTTTTCTATTGTCAGGACATGAAGTGCATCTGGAAGAGGAACTGGTCAGGACTGCTGCAGAATGTTTGGTCACCATTTCATCATCCGTGTGTCATACTTGTTCTGAAAGGACCACATACAAGCCAACTGAAACTTCATCTGATTCCCTAAAGTGGTTTGCTGGTTTAGCGTCTTCAGTTTTAGGCAGTCTAGAAAACGAGGTGGGATGCAGTAATCATCAGGAGGTTCTCCCTGATGGAATGGACTACTTTGAGGCCATGACATTGAAGCTACCAGAGTCAAAGGTGGAAGAGTGCTGCTGCTACAGAAGTAATGGCTACAAAGAGGAAGTGATGGTTACAGCTTCATCACAAAGTCAGCCAAAAAAGGGTCGACCTAGAAAAGGAAGGCAACGGAGGAAGGACTTCCAAAGGGAAATTCTCCCTGGCCTTGCTTCTTTGTCAAGGTATGAGGTGACTGAGGATCTTCAGATCATAGGAACACTAATTGAGGCTTCTGCTGATTGCTCCGAAACAAGATCAGTAAGACATGCAGCTAAATTTGGGTTGGCAAGGGGGAGGAGAAGGTGCACCATTTCTGCTTCCGCTGTAAAAGAGAATACTGCCGCTTCACCACTGAATCACATTGGTGTCAAAAGGCAATTGGAATGTGAGAAGAGAAGCCTAATTGATTGGGGAGAGGTAACTAGGCGGCGTAGAGGGCAGAGAAATTCGGGTAGTGATCTGCGGCTGATTAGAAACAAGGTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF863

Protein Analysis

1164

Amino Acids

128.81

Weight (kDa)

5.29

Isoelectric Point (pI)

62.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF863 PF05904 125 - 262 8.8e-10 Plant protein of unknown function (DUF863)
DUF863 PF05904 273 - 568 2.2e-17 Plant protein of unknown function (DUF863)
DUF863 PF05904 571 - 707 4e-08 Plant protein of unknown function (DUF863)
DUF863 PF05904 890 - 1150 5.7e-59 Plant protein of unknown function (DUF863)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 879
AarI CACCTGC 1 cut(s) 2107
AbsI CCTCGAGG 1 cut(s) 924
Acc16I TGCGCA 1 cut(s) 984
Acc36I ACCTGC 3 cut(s) 1512, 1949, 2107
AccB1I GGYRCC 2 cut(s) 293, 2095
AccI GTMKAC 1 cut(s) 3115
AciI CCGC 6 cut(s) 223, 310, 3327, 3348, 3433, 3469
AclWI GGATC 2 cut(s) 210, 3213
AcuI CTGAAG 5 cut(s) 492, 630, 1045, 2901, 3194
AcyI GRCGYC 1 cut(s) 2139
AfaI GTAC 7 cut(s) 444, 1216, 1348, 1363, 1570, 2274, 2355
AfiI CCNNNNNNNGG 6 cut(s) 2135, 2225, 2672, 2895, 3110, 3125
AflII CTTAAG 1 cut(s) 91
AflIII ACRYGT 1 cut(s) 1927
AjnI CCWGG 1 cut(s) 3166
AjuI GAANNNNNNNTTGG 4 cut(s) 2860, 2892, 3144, 3176
AleI CACNNNNGTG 1 cut(s) 3369
Alw21I GWGCWC 5 cut(s) 37, 349, 1124, 1896, 3314
Alw26I GTCTC 9 cut(s) 330, 1372, 1755, 1757, 1804, 2146, 2408, 2567, 2732
Alw44I GTGCAC 3 cut(s) 1120, 1892, 3310
AlwI GGATC 2 cut(s) 210, 3213
AlwNI CAGNNNCTG 5 cut(s) 211, 398, 782, 2318, 2399
Ama87I CYCGRG 2 cut(s) 650, 924
AoxI GGCC 6 cut(s) 475, 803, 1419, 2387, 2997, 3169
ApaI GGGCCC 2 cut(s) 807, 1423
ApaLI GTGCAC 3 cut(s) 1120, 1892, 3310
ArsI GACNNNNNNTTYG 2 cut(s) 304, 336
Asp700I GAANNNNTTC 3 cut(s) 604, 1069, 3146
AspLEI GCGC 1 cut(s) 985
AspS9I GGNCC 8 cut(s) 214, 535, 803, 804, 1100, 1419, 1420, 2853
AsuHPI GGTGA 8 cut(s) 405, 680, 1007, 1793, 1805, 2806, 3208, 3345
AvaI CYCGRG 2 cut(s) 650, 924
AvaII GGWCC 4 cut(s) 214, 535, 1100, 2853
BaeGI GKGCMC 6 cut(s) 296, 807, 1124, 1423, 1896, 3314
BanI GGYRCC 2 cut(s) 293, 2095
BanII GRGCYC 3 cut(s) 37, 807, 1423
BarI GAAGNNNNNNTAC 2 cut(s) 1302, 1334
BauI CACGAG 1 cut(s) 1143
BbsI GAAGAC 4 cut(s) 241, 600, 2205, 2907
Bbv12I GWGCWC 5 cut(s) 37, 349, 1124, 1896, 3314
BbvCI CCTCAGC 1 cut(s) 618
BccI CCATC 9 cut(s) 1352, 1438, 1442, 1824, 2144, 2347, 2593, 2972, 3070
BciT130I CCWGG 1 cut(s) 3168
BclI TGATCA 2 cut(s) 1087, 1783
BcoDI GTCTC 9 cut(s) 330, 1372, 1755, 1757, 1804, 2146, 2408, 2567, 2732
BfaI CTAG 7 cut(s) 1344, 1563, 2103, 2385, 2933, 3120, 3429
BfmI CTRYAG 7 cut(s) 764, 1505, 2223, 2447, 2603, 2799, 3046
BfrI CTTAAG 1 cut(s) 91
BfuAI ACCTGC 3 cut(s) 1512, 1949, 2107
BglII AGATCT 2 cut(s) 2281, 2362
Bme1390I CCNGG 1 cut(s) 3168
Bme18I GGWCC 4 cut(s) 214, 535, 1100, 2853
BmeT110I CYCGRG 2 cut(s) 650, 924
BmgT120I GGNCC 8 cut(s) 214, 535, 803, 804, 1100, 1419, 1420, 2853
BmiI GGNNCC 8 cut(s) 295, 804, 805, 993, 1420, 1421, 1807, 2097
BmrFI CCNGG 1 cut(s) 3168
BmrI ACTGGG 1 cut(s) 56
BmsI GCATC 8 cut(s) 661, 728, 794, 1342, 1567, 1945, 2779, 2939
BmuI ACTGGG 1 cut(s) 56
BpiI GAAGAC 4 cut(s) 241, 600, 2205, 2907
BpmI CTGGAG 2 cut(s) 694, 2181
Bpu10I CCTNAGC 1 cut(s) 618
BpuEI CTTGAG 2 cut(s) 1325, 1750
BsaAI YACGTR 1 cut(s) 1214
BsaBI GATNNNNATC 5 cut(s) 1704, 2154, 2241, 2487, 2562
BsaHI GRCGYC 1 cut(s) 2139
BsaI GGTCTC 2 cut(s) 1372, 1755
BsaJI CCNNGG 4 cut(s) 297, 521, 651, 3166
BsaXI ACNNNNNCTCC 2 cut(s) 854, 884
Bsc4I CCNNNNNNNGG 6 cut(s) 2135, 2225, 2672, 2895, 3110, 3125
Bse1I ACTGG 7 cut(s) 62, 409, 711, 1612, 2193, 2598, 2790
Bse3DI GCAATG 3 cut(s) 1176, 1393, 2067
Bse8I GATNNNNATC 5 cut(s) 1704, 2154, 2241, 2487, 2562
BseBI CCWGG 1 cut(s) 3168
BseDI CCNNGG 4 cut(s) 297, 521, 651, 3166
BseJI GATNNNNATC 5 cut(s) 1704, 2154, 2241, 2487, 2562
BseLI CCNNNNNNNGG 6 cut(s) 2135, 2225, 2672, 2895, 3110, 3125
BseMI GCAATG 3 cut(s) 1176, 1393, 2067
BseMII CTCAG 9 cut(s) 609, 1279, 1328, 1815, 1839, 2318, 2480, 2636, 3192
BseNI ACTGG 7 cut(s) 62, 409, 711, 1612, 2193, 2598, 2790
BseRI GAGGAG 1 cut(s) 3316
BseSI GKGCMC 6 cut(s) 296, 807, 1124, 1423, 1896, 3314
BseYI CCCAGC 2 cut(s) 890, 1422
BsgI GTGCAG 1 cut(s) 1135
BshFI GGCC 6 cut(s) 477, 805, 1421, 2389, 2999, 3171
BshNI GGYRCC 2 cut(s) 293, 2095
BsiHKAI GWGCWC 5 cut(s) 37, 349, 1124, 1896, 3314
BsiHKCI CYCGRG 2 cut(s) 650, 924
BsiWI CGTACG 1 cut(s) 442
BslI CCNNNNNNNGG 6 cut(s) 2135, 2225, 2672, 2895, 3110, 3125
BsmAI GTCTC 9 cut(s) 330, 1372, 1755, 1757, 1804, 2146, 2408, 2567, 2732
BsmBI CGTCTC 1 cut(s) 2146
BsmI GAATGC 1 cut(s) 449
BsnI GGCC 6 cut(s) 477, 805, 1421, 2389, 2999, 3171
Bso31I GGTCTC 2 cut(s) 1372, 1755
BsoBI CYCGRG 2 cut(s) 650, 924
Bsp120I GGGCCC 2 cut(s) 803, 1419
Bsp1286I GDGCHC 8 cut(s) 37, 296, 349, 807, 1124, 1423, 1896, 3314
BspACI CCGC 6 cut(s) 223, 310, 3327, 3348, 3433, 3469
BspANI GGCC 6 cut(s) 477, 805, 1421, 2389, 2999, 3171
BspCNI CTCAG 9 cut(s) 610, 1278, 1329, 1814, 1838, 2317, 2479, 2635, 3193
BspLI GGNNCC 8 cut(s) 295, 804, 805, 993, 1420, 1421, 1807, 2097
BspMAI CTGCAG 4 cut(s) 1509, 2451, 2607, 2803
BspMI ACCTGC 3 cut(s) 1512, 1949, 2107
BspPI GGATC 2 cut(s) 210, 3213
BspT107I GGYRCC 2 cut(s) 293, 2095
BspTI CTTAAG 1 cut(s) 91
BspTNI GGTCTC 2 cut(s) 1372, 1755
BsrDI GCAATG 3 cut(s) 1176, 1393, 2067
BsrI ACTGG 7 cut(s) 62, 409, 711, 1612, 2193, 2598, 2790
BssECI CCNNGG 4 cut(s) 297, 521, 651, 3166
BssNI GRCGYC 1 cut(s) 2139
BssSI CACGAG 1 cut(s) 1143
Bst2BI CACGAG 1 cut(s) 1143
Bst2UI CCWGG 1 cut(s) 3168
Bst4CI ACNGT 8 cut(s) 996, 1277, 1323, 1366, 1376, 1469, 1790, 1918
Bst6I CTCTTC 4 cut(s) 573, 2772, 3027, 3392
BstACI GRCGYC 1 cut(s) 2139
BstAFI CTTAAG 1 cut(s) 91
BstAPI GCANNNNNTGC 1 cut(s) 175
BstBAI YACGTR 1 cut(s) 1214
BstC8I GCNNGC 2 cut(s) 373, 981
BstEII GGTNACC 1 cut(s) 2812
BstENI CCTNNNNNAGG 1 cut(s) 3123
BstHHI GCGC 1 cut(s) 985
BstMAI GTCTC 9 cut(s) 330, 1372, 1755, 1757, 1804, 2146, 2408, 2567, 2732
BstMWI GCNNNNNNNGC 7 cut(s) 175, 713, 818, 852, 1232, 2909, 3442
BstNI CCWGG 1 cut(s) 3168
BstNSI RCATGY 3 cut(s) 375, 1931, 3275
BstPI GGTNACC 1 cut(s) 2812
BstSCI CCNGG 1 cut(s) 3166
BstSFI CTRYAG 7 cut(s) 764, 1505, 2223, 2447, 2603, 2799, 3046
BstSLI GKGCMC 6 cut(s) 296, 807, 1124, 1423, 1896, 3314
BstV2I GAAGAC 4 cut(s) 241, 600, 2205, 2907
BstX2I RGATCY 3 cut(s) 2281, 2362, 3205
BstXI CCANNNNNNTGG 1 cut(s) 1607
BstYI RGATCY 3 cut(s) 2281, 2362, 3205
BsuRI GGCC 6 cut(s) 477, 805, 1421, 2389, 2999, 3171
BtsI GCAGTG 2 cut(s) 112, 807
BtsIMutI CAGTG 5 cut(s) 112, 718, 807, 1786, 3356
BveI ACCTGC 3 cut(s) 1512, 1949, 2107
Cac8I GCNNGC 2 cut(s) 373, 981
CaiI CAGNNNCTG 5 cut(s) 211, 398, 782, 2318, 2399
CfoI GCGC 1 cut(s) 985
Cfr13I GGNCC 8 cut(s) 214, 535, 803, 804, 1100, 1419, 1420, 2853
CseI GACGC 2 cut(s) 2128, 2901
Csp6I GTAC 7 cut(s) 443, 1215, 1347, 1362, 1569, 2273, 2354
CviQI GTAC 7 cut(s) 443, 1215, 1347, 1362, 1569, 2273, 2354
DraI TTTAAA 1 cut(s) 1872
Eam1104I CTCTTC 4 cut(s) 573, 2772, 3027, 3392
EarI CTCTTC 4 cut(s) 573, 2772, 3027, 3392
EciI GGCGGA 1 cut(s) 325
Ecl136II GAGCTC 1 cut(s) 35
Eco24I GRGCYC 3 cut(s) 37, 807, 1423
Eco31I GGTCTC 2 cut(s) 1372, 1755
Eco32I GATATC 1 cut(s) 1837
Eco47I GGWCC 4 cut(s) 214, 535, 1100, 2853
Eco53kI GAGCTC 1 cut(s) 35
Eco57I CTGAAG 5 cut(s) 492, 630, 1045, 2901, 3194
Eco88I CYCGRG 2 cut(s) 650, 924
Eco91I GGTNACC 1 cut(s) 2812
EcoICRI GAGCTC 1 cut(s) 35
EcoNI CCTNNNNNAGG 1 cut(s) 3123
EcoO109I RGGNCCY 2 cut(s) 803, 1419
EcoO65I GGTNACC 1 cut(s) 2812
EcoRI GAATTC 2 cut(s) 10, 645
EcoRII CCWGG 1 cut(s) 3166
EcoRV GATATC 1 cut(s) 1837
EcoT22I ATGCAT 1 cut(s) 1203
EcoT38I GRGCYC 3 cut(s) 37, 807, 1423
Esp3I CGTCTC 1 cut(s) 2146
FalI AAGNNNNNCTT 2 cut(s) 1096, 1128
FbaI TGATCA 2 cut(s) 1087, 1783
FblI GTMKAC 1 cut(s) 3115
FriOI GRGCYC 3 cut(s) 37, 807, 1423
FspBI CTAG 7 cut(s) 1344, 1563, 2103, 2385, 2933, 3120, 3429
FspI TGCGCA 1 cut(s) 984
GlaI GCGC 1 cut(s) 984
GsaI CCCAGC 2 cut(s) 894, 1426
GsuI CTGGAG 2 cut(s) 694, 2181
HaeIII GGCC 6 cut(s) 477, 805, 1421, 2389, 2999, 3171
HgaI GACGC 2 cut(s) 2128, 2901
HhaI GCGC 1 cut(s) 985
Hin1I GRCGYC 1 cut(s) 2139
Hin6I GCGC 1 cut(s) 983
HinP1I GCGC 1 cut(s) 983
HincII GTYRAC 5 cut(s) 742, 1736, 2164, 2332, 3116
HindII GTYRAC 5 cut(s) 742, 1736, 2164, 2332, 3116
HindIII AAGCTT 4 cut(s) 819, 977, 1619, 2613
HphI GGTGA 8 cut(s) 405, 680, 1007, 1793, 1805, 2806, 3208, 3345
Hpy99I CGWCG 2 cut(s) 1030, 1174
HpyAV CCTTC 9 cut(s) 426, 467, 548, 1528, 1569, 2082, 3123, 3136, 3300
HpyCH4III ACNGT 8 cut(s) 996, 1277, 1323, 1366, 1376, 1469, 1790, 1918
HpyCH4IV ACGT 2 cut(s) 441, 1213
HpyF10VI GCNNNNNNNGC 7 cut(s) 175, 713, 818, 852, 1232, 2909, 3442
HpySE526I ACGT 2 cut(s) 441, 1213
Hsp92I GRCGYC 1 cut(s) 2139
HspAI GCGC 1 cut(s) 983
Ksp22I TGATCA 2 cut(s) 1087, 1783
LmnI GCTCC 6 cut(s) 32, 784, 1109, 1811, 2200, 3254
LweI GCATC 8 cut(s) 661, 728, 794, 1342, 1567, 1945, 2779, 2939
MaeI CTAG 7 cut(s) 1344, 1563, 2103, 2385, 2933, 3120, 3429
MaeII ACGT 2 cut(s) 441, 1213
MaeIII GTNAC 9 cut(s) 411, 1145, 1317, 1721, 2497, 2812, 3079, 3196, 3424
MfeI CAATTG 1 cut(s) 3383
MflI RGATCY 3 cut(s) 2281, 2362, 3205
MhlI GDGCHC 8 cut(s) 37, 296, 349, 807, 1124, 1423, 1896, 3314
MlyI GAGTC 7 cut(s) 495, 1741, 2092, 2219, 2627, 2711, 3029
MmeI TCCRAC 1 cut(s) 1431
Mph1103I ATGCAT 1 cut(s) 1203
MroXI GAANNNNTTC 3 cut(s) 604, 1069, 3146
MseI TTAA 9 cut(s) 92, 198, 746, 1187, 1248, 1292, 1461, 1871, 1947
MslI CAYNNNNRTG 5 cut(s) 418, 939, 1240, 2830, 3369
MspA1I CMGCKG 3 cut(s) 551, 617, 3329
MspCI CTTAAG 1 cut(s) 91
MspR9I CCNGG 1 cut(s) 3168
MunI CAATTG 1 cut(s) 3383
Mva1269I GAATGC 1 cut(s) 449
MvaI CCWGG 1 cut(s) 3168
MwoI GCNNNNNNNGC 7 cut(s) 175, 713, 818, 852, 1232, 2909, 3442
NlaIV GGNNCC 8 cut(s) 295, 804, 805, 993, 1420, 1421, 1807, 2097
NmuCI GTSAC 6 cut(s) 411, 1145, 1721, 2497, 2812, 3196
NsbI TGCGCA 1 cut(s) 984
NsiI ATGCAT 1 cut(s) 1203
NspI RCATGY 3 cut(s) 375, 1931, 3275
OliI CACNNNNGTG 1 cut(s) 3369
PaeI GCATGC 1 cut(s) 375
PaeR7I CTCGAG 1 cut(s) 924
PaqCI CACCTGC 1 cut(s) 2107
PciI ACATGT 1 cut(s) 1927
PcsI WCGNNNNNNNCGW 1 cut(s) 2364
PctI GAATGC 1 cut(s) 449
PdmI GAANNNNTTC 3 cut(s) 604, 1069, 3146
Pfl23II CGTACG 1 cut(s) 442
PleI GAGTC 7 cut(s) 494, 1740, 2091, 2218, 2627, 2711, 3028
PpsI GAGTC 7 cut(s) 494, 1740, 2091, 2218, 2627, 2711, 3028
Ppu21I YACGTR 1 cut(s) 1214
PscI ACATGT 1 cut(s) 1927
PsiI TTATAA 1 cut(s) 879
Psp124BI GAGCTC 1 cut(s) 37
Psp6I CCWGG 1 cut(s) 3166
PspEI GGTNACC 1 cut(s) 2812
PspFI CCCAGC 2 cut(s) 890, 1422
PspGI CCWGG 1 cut(s) 3166
PspLI CGTACG 1 cut(s) 442
PspN4I GGNNCC 8 cut(s) 295, 804, 805, 993, 1420, 1421, 1807, 2097
PspOMI GGGCCC 2 cut(s) 803, 1419
PspPI GGNCC 8 cut(s) 214, 535, 803, 804, 1100, 1419, 1420, 2853
PspXI VCTCGAGB 1 cut(s) 924
PstI CTGCAG 4 cut(s) 1509, 2451, 2607, 2803
PstNI CAGNNNCTG 5 cut(s) 211, 398, 782, 2318, 2399
PsuI RGATCY 3 cut(s) 2281, 2362, 3205
PvuII CAGCTG 2 cut(s) 551, 617
RsaI GTAC 7 cut(s) 444, 1216, 1348, 1363, 1570, 2274, 2355
RsaNI GTAC 7 cut(s) 443, 1215, 1347, 1362, 1569, 2273, 2354
RseI CAYNNNNRTG 5 cut(s) 418, 939, 1240, 2830, 3369
SacI GAGCTC 1 cut(s) 37
SalI GTCGAC 1 cut(s) 3114
SaqAI TTAA 9 cut(s) 92, 198, 746, 1187, 1248, 1292, 1461, 1871, 1947
Sau96I GGNCC 8 cut(s) 214, 535, 803, 804, 1100, 1419, 1420, 2853
SbfI CCTGCAGG 1 cut(s) 1509
SchI GAGTC 7 cut(s) 495, 1741, 2092, 2219, 2627, 2711, 3029
ScrFI CCNGG 1 cut(s) 3168
SdaI CCTGCAGG 1 cut(s) 1509
SduI GDGCHC 8 cut(s) 37, 296, 349, 807, 1124, 1423, 1896, 3314
SfaNI GCATC 8 cut(s) 661, 728, 794, 1342, 1567, 1945, 2779, 2939
SfcI CTRYAG 7 cut(s) 764, 1505, 2223, 2447, 2603, 2799, 3046
Sfr274I CTCGAG 1 cut(s) 924
SinI GGWCC 4 cut(s) 214, 535, 1100, 2853
SlaI CTCGAG 1 cut(s) 924
SmiI ATTTAAAT 1 cut(s) 1872
SmiMI CAYNNNNRTG 5 cut(s) 418, 939, 1240, 2830, 3369
SmlI CTYRAG 4 cut(s) 91, 924, 1304, 1729
SmoI CTYRAG 4 cut(s) 91, 924, 1304, 1729
SphI GCATGC 1 cut(s) 375
Sse8387I CCTGCAGG 1 cut(s) 1509
SsiI CCGC 6 cut(s) 223, 310, 3327, 3348, 3433, 3469
SspI AATATT 1 cut(s) 832
SspMI CTAG 7 cut(s) 1344, 1563, 2103, 2385, 2933, 3120, 3429
SstI GAGCTC 1 cut(s) 37
StyD4I CCNGG 1 cut(s) 3166
SwaI ATTTAAAT 1 cut(s) 1872
TaaI ACNGT 8 cut(s) 996, 1277, 1323, 1366, 1376, 1469, 1790, 1918
TaiI ACGT 2 cut(s) 444, 1216
TaqI TCGA 8 cut(s) 541, 816, 925, 1028, 2286, 2344, 2367, 3115
TatI WGTACW 4 cut(s) 1346, 1568, 2272, 2353
TauI GCSGC 3 cut(s) 3350, 3436, 3472
Tru1I TTAA 9 cut(s) 92, 198, 746, 1187, 1248, 1292, 1461, 1871, 1947
Tru9I TTAA 9 cut(s) 92, 198, 746, 1187, 1248, 1292, 1461, 1871, 1947
TscAI CASTG 5 cut(s) 112, 718, 814, 1793, 3363
TseFI GTSAC 6 cut(s) 411, 1145, 1721, 2497, 2812, 3196
Tsp45I GTSAC 6 cut(s) 411, 1145, 1721, 2497, 2812, 3196
TspGWI ACGGA 6 cut(s) 479, 682, 1169, 2026, 2818, 3151
TspRI CASTG 5 cut(s) 112, 718, 814, 1793, 3363
Vha464I CTTAAG 1 cut(s) 91
VneI GTGCAC 3 cut(s) 1120, 1892, 3310
VpaK11BI GGWCC 4 cut(s) 214, 535, 1100, 2853
XagI CCTNNNNNAGG 1 cut(s) 3123
XbaI TCTAGA 1 cut(s) 2932
XceI RCATGY 3 cut(s) 375, 1931, 3275
XcmI CCANNNNNNNNNTGG 1 cut(s) 227
XhoI CTCGAG 1 cut(s) 924
XmiI GTMKAC 1 cut(s) 3115
XmnI GAANNNNTTC 3 cut(s) 604, 1069, 3146
XspI CTAG 7 cut(s) 1344, 1563, 2103, 2385, 2933, 3120, 3429
Zsp2I ATGCAT 1 cut(s) 1203
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.