Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr6

Orthogroup ID

OG0003065

Physical Location & Seq

Genomic Coordinates Forward (+)

21518768 .. 21522053

Gene Structure 3286 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom06g17590.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2784 bp

ATGCTCAAGCAAGACACAATACTTAGGAATCAGATTCAGGACCTCCATCTGCTTTATGGAAGACAAAGGGAATTAATGGATGGAATAAGAAGGAATGAATTTGAGAAACATCGGCCGAAGACAGAGGCTTCATGGTTGACCACTGCTTTGTCTCGGAACTCATCTGTTTATGTTCAAAAAACACTTCACGCCCCTTCCTTGCCTTTGGTAAACCCTGCATGTGGTCAAATCTCTGTGTCAGCTGCTGAAAGTATAGAGTCACCTTCATGTTTTGTTCGAGGGAGGAACATACAGACATGCTTTTATCCTATTCAAACTGAAGGCCGTTCGGGAGACTGTGAATTGTTGGAATCCAAATGCAAGAAATTTCAGAAGAACTTTGATCTCGAACTTCCAGCCGATGCATACATTGATGATGAAGGAGAAGGATTCTTAGTAGATGGAAAGGTTTCTGAAGTACCTGAGGTATCAAGTTCTCGTTTGAAAAGATTTCCAGAGGTTTTGTGTAATGGTGATGCAAAACAATTTCTTGGTTCTGAAGATGATACCTCAACTTCTGCATCATTAGAAAAAGATTCAGTTGACTTAAATTTTGTGTATAAGCTTGAGAAAGGAACATCTCCTACACCAGGCCGTCAGTTTTTATCCAAGGAACTTATCCAAGACGCCCGGAAAAGACAGGATTTTGAAGTTTTCTCAAATGTTCTACTGCAAGAGAGAAAAAGGAAAGAAGAGTGGTCATCCACTTATGAAGCTGGGAAAAGGAAAAGAACCTTGGATTCTTTTCCTCAAGGTTCTCATGCAGATCAATTTTATCCTTCATCTAGTTTATTACATGAGGAGCTTAAGGCAGCTGAACCTCCACCCTTTCATCAGAGTAACCACAATTCATGGAGTGGAAGAACAATTGTCGGTCTACAGAAGCCAGGAAGTTATAGCCAATCTGGACCAAGCGGAGCTTCTTCCTTGTGCATGCCATATCAACATACTCCTCAGGGTGAGATGGCAAATTCAGGGGCCTCATGCATTGCTGCTTTAAGAAAACCTGTACACAACTTTGCACGTTTCCCAACAGCAGTTCAAGCACTCCCTTGTTTTAACACCCCCATTCCATTAGGTAATAGTTCTAAATCGTCGACGATAAGGCCTGGGATCAATGGTGATAGTTTACAGTTGAAACATGATTTGAGATCTAGCACAAAACATGGTAGTGCCTTCTCTCTTGATGATAACTTTAGCAATGGCTCCCAGTTGGAATCCAAGAATTCAGAGGTCCACCGACCACACATCAGTTTAGATAATCTGATCCGGACTAATGACAATATAGGGATTGAACACCATGGCGTTACAAAAGACGTGTTGGATTCTGCAAGTGTCAAGTCTCGTAAGGATATTAACTTGAATTGTGTACCTACTGGTTGTTCTCTGGATGCCACAGTTTCCCAGAGTTTCCAAGCAACAACTGGATCAGAAAAGCTCGAAGCTTCTAGTGAGGGGTTGCCTTGGCATAGGCGGAACCATAATGGCAAAACTGACAAAGGATGTGATAATTCAACCCAGGTGGAGGCAAGTGATTCCTCAAGTAAAATAATTCGCGACTCTACTGGCCACCCCTACAATTCCATTCTGAACCCACCTGAAGAAGTCAAGAAAAGAAGAGAAGCTGTGGTACTTGATTTAAACGTGGCTTGCGATTCCGTGCTTGACGCAGAAATTGAACTTACAGAACAGCTAGTAGAGAATGAATTTGATAGGAAAGATTTTGGATTTCAAATTGACCTGAACTCGTCCGTAATTGGAGATGAGTTTTCACCAACGGACTCTCTTTCAACTGGAATTCTTTTGGAGGCACCTGCTAGTCCAGAAAACAAGGAGTGTTCTCCACTGAGAGGAGAATCAGATGAAAATCAAGTTGAGACACCTTTTCTGTTGCCAGGACAGGATGATCCAGAAAACAATGAGCGTTTTCCGCCAGTAGGAGAATCTGATCAAAATCAAGTTGAGACACCTTTTCGATTGTCAGGACAGGAAGATCCGGGAAACAATGTGTGTCCTCTGCTGATACTAGAATTTGATGAAAACCAAGTTGACAGTACCGCAGCAGAATCTTTGGTTTCCATTTCGTCATCCGAGCTTCATACTTGTATCGTAAGCACCACGGAAAAGCCACTTGAAACTTCATGTGCCTCCCTATGTTGGTTTGCTGGGATAGCTTCTTCAGTTGTTGGCGGTCGAGAGAACGAGGGTAGAGTGGTTATCAGCGAGGAGCTTCTACCTGATGGGATGGACTACTTTGAGGTCATGACATTGAATTTAACTGAGACAAAAGTGGAAGAGTGCTGCTGCTGCAGAAGTAATTGCCACAATAAGGAAGAAACTAGTACCACTTCATTACCAGATCAGCCAAGGAATGGCCGGAAAAGGAGGGGAAGGCAGCGGAAGGATTTCCAGAGCGAAATTCTCCCAAATCTTGCTTCTTTGTCAAGGCATGAGGTGACTGAAGATCTTCAGACAATAGAAAAGTTAATTGGGTCTTCTGGTAAAACAAGGTTGGTTAGATGCGCAGCTAAACTTGGGTTGGCGAGGGGGAGGAGAAGGTCCAGCATTTCTCCGTCCACTGTAACCGAGAATACTTTGGAATCACTGTTGAAGCAGATTGGTGGCACAAGTCAATTCGGAAACGAGGAGAGAAGAAGTCTAATTTGTTGGGGAGAGGTAACTAGGCGGCGTAGAGGGCAGAGATATCCAGTTAGCAAGCCTCGGCTCATTTCAGGCCAAGTATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF863

Protein Analysis

928

Amino Acids

102.55

Weight (kDa)

5.5

Isoelectric Point (pI)

59.46

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003065)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g14380 FvH4_5g14380 FvH4_5g14380 FvH4_5g14380 FvH4_5g14380 FvH4_5g14380 FvH4_5g14380 FvH4_5g14380 FvH4_5g14380 FvH4_5g14380 FvH4_5g14380 FvH4_5g14380 FvH4_5g14380 FvH4_5g14380
malus_domestica	MD06G1199000.v1.1 MD14G1206400.v1.1
prunus_persica	Prupe.5G199800_v2.0.a1 Prupe.5G199800_v2.0.a1 Prupe.5G199800_v2.0.a1 Prupe.5G199800_v2.0.a1 Prupe.5G199800_v2.0.a1
pyrus_communis	pycom06g17590 pycom14g17090
rosa_chinensis	RchiOBHm_Chr7g0182271 RchiOBHm_Chr7g0182291
rosa_laevigata	RLG00000005135
rosa_multiflora	Rmu_sc0000003.1_g000008
rosa_roxburghii	Rroxscaffold_3G00271350 Rroxscaffold_3G00271360
rosa_rugosa	Rorug06G0446600 Rorug06G0446600 Rorug06G0446700 Rorug06G0446800
rosa_samantha	Rh7AG049700 Rh7BG049800 Rh7CG051100 Rh7DG049000
rosa_wichuraiana	Rw7G004080

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1861
Acc16I	TGCGCA	1 cut(s)	2563
Acc36I	ACCTGC	1 cut(s)	1861
AccB1I	GGYRCC	1 cut(s)	1849
AccB7I	CCANNNNNTGG	1 cut(s)	2411
AccI	GTMKAC	2 cut(s)	916, 1136
AccII	CGCG	1 cut(s)	1596
AccIII	TCCGGA	1 cut(s)	1308
AciI	CCGC	7 cut(s)	954, 1513, 1970, 2097, 2229, 2437, 2725
AclWI	GGATC	5 cut(s)	1160, 1300, 1474, 1940, 2027
AcoI	YGGCCR	3 cut(s)	113, 1606, 2413
AcuI	CTGAAG	7 cut(s)	339, 474, 558, 1659, 2202, 2492, 2520
AcyI	GRCGYC	1 cut(s)	666
AfaI	GTAC	6 cut(s)	459, 1050, 1410, 1671, 2095, 2383
AfiI	CCNNNNNNNGG	8 cut(s)	221, 629, 1564, 1889, 1976, 2196, 2368, 2411
AflII	CTTAAG	1 cut(s)	845
AflIII	ACRYGT	1 cut(s)	1356
AhlI	ACTAGT	1 cut(s)	2378
AjiI	CACGTC	1 cut(s)	1357
AjnI	CCWGG	5 cut(s)	628, 925, 1147, 1557, 1933
AjuI	GAANNNNNNNTTGG	8 cut(s)	758, 790, 943, 975, 2458, 2490, 2511, 2543
Alw26I	GTCTC	6 cut(s)	156, 327, 1386, 1910, 1997, 2315
AlwI	GGATC	5 cut(s)	1160, 1300, 1474, 1940, 2027
AlwNI	CAGNNNCTG	1 cut(s)	245
Aor13HI	TCCGGA	1 cut(s)	1308
AoxI	GGCC	8 cut(s)	113, 322, 631, 1017, 1145, 1606, 2413, 2773
ApeKI	GCWGC	9 cut(s)	242, 851, 1031, 2099, 2340, 2343, 2346, 2434, 2564
ArsI	GACNNNNNNTTYG	4 cut(s)	130, 162, 575, 607
AseI	ATTAAT	1 cut(s)	74
Asp700I	GAANNNNTTC	3 cut(s)	448, 2444, 2505
AspLEI	GCGC	1 cut(s)	2564
AspS9I	GGNCC	5 cut(s)	40, 947, 1017, 1273, 2598
AsuC2I	CCSGG	2 cut(s)	670, 2037
AsuHPI	GGTGA	6 cut(s)	252, 524, 1010, 1172, 1803, 2506
AvaII	GGWCC	4 cut(s)	40, 947, 1273, 2598
AxyI	CCTNAGG	2 cut(s)	462, 993
BalI	TGGCCA	1 cut(s)	1608
BanI	GGYRCC	1 cut(s)	1849
BarI	GAAGNNNNNNTAC	2 cut(s)	1653, 1685
BbsI	GAAGAC	3 cut(s)	67, 125, 2526
BbvI	GCAGC	9 cut(s)	229, 863, 1018, 2111, 2327, 2330, 2333, 2446, 2576
BccI	CCATC	6 cut(s)	54, 74, 434, 997, 2273, 2278
BceAI	ACGGC	2 cut(s)	309, 618
BciT130I	CCWGG	5 cut(s)	630, 927, 1149, 1559, 1935
BclI	TGATCA	1 cut(s)	1987
BcnI	CCSGG	2 cut(s)	670, 2037
BcoDI	GTCTC	6 cut(s)	156, 327, 1386, 1910, 1997, 2315
BcuI	ACTAGT	1 cut(s)	2378
BfaI	CTAG	8 cut(s)	825, 1194, 1488, 1733, 1857, 2066, 2379, 2721
BfmI	CTRYAG	2 cut(s)	917, 2347
BfrI	CTTAAG	1 cut(s)	845
BfuAI	ACCTGC	1 cut(s)	1861
BglII	AGATCT	2 cut(s)	1190, 2503
Bme1390I	CCNGG	7 cut(s)	630, 670, 927, 1149, 1559, 1935, 2037
Bme18I	GGWCC	4 cut(s)	40, 947, 1273, 2598
BmgBI	CACGTC	1 cut(s)	1357
BmgT120I	GGNCC	5 cut(s)	40, 947, 1017, 1273, 2598
BmiI	GGNNCC	4 cut(s)	1018, 1246, 1517, 1851
BmrFI	CCNGG	7 cut(s)	630, 670, 927, 1149, 1559, 1935, 2037
BmrI	ACTGGG	1 cut(s)	1243
BmsI	GCATC	5 cut(s)	391, 505, 569, 1420, 2549
BmuI	ACTGGG	1 cut(s)	1243
BpiI	GAAGAC	3 cut(s)	67, 125, 2526
BpuEI	CTTGAG	3 cut(s)	626, 774, 1564
BpuMI	CCSGG	2 cut(s)	670, 2037
BsaBI	GATNNNNATC	2 cut(s)	1905, 1992
BsaHI	GRCGYC	1 cut(s)	666
BsaJI	CCNNGG	9 cut(s)	648, 774, 1148, 1339, 1502, 1557, 2157, 2405, 2759
BsaWI	WCCGGW	1 cut(s)	1308
Bsc4I	CCNNNNNNNGG	8 cut(s)	221, 629, 1564, 1889, 1976, 2196, 2368, 2411
Bse1I	ACTGG	7 cut(s)	1249, 1420, 1468, 1609, 1837, 1973, 2747
Bse21I	CCTNAGG	2 cut(s)	462, 993
Bse3DI	GCAATG	2 cut(s)	1026, 1246
Bse8I	GATNNNNATC	2 cut(s)	1905, 1992
BseAI	TCCGGA	1 cut(s)	1308
BseBI	CCWGG	5 cut(s)	630, 927, 1149, 1559, 1935
BseDI	CCNNGG	9 cut(s)	648, 774, 1148, 1339, 1502, 1557, 2157, 2405, 2759
BseGI	GGATG	7 cut(s)	85, 740, 1435, 1547, 1948, 2126, 2289
BseJI	GATNNNNATC	2 cut(s)	1905, 1992
BseLI	CCNNNNNNNGG	8 cut(s)	221, 629, 1564, 1889, 1976, 2196, 2368, 2411
BseMI	GCAATG	2 cut(s)	1026, 1246
BseMII	CTCAG	4 cut(s)	453, 1007, 1877, 2310
BseNI	ACTGG	7 cut(s)	1249, 1420, 1468, 1609, 1837, 1973, 2747
BseRI	GAGGAG	6 cut(s)	854, 981, 1905, 2279, 2605, 2699
BseX3I	CGGCCG	1 cut(s)	113
BseXI	GCAGC	9 cut(s)	229, 863, 1018, 2111, 2327, 2330, 2333, 2446, 2576
BseYI	CCCAGC	2 cut(s)	755, 2204
Bsh1236I	CGCG	1 cut(s)	1596
Bsh1285I	CGRYCG	2 cut(s)	116, 2233
BshFI	GGCC	8 cut(s)	115, 324, 633, 1019, 1147, 1608, 2415, 2775
BshNI	GGYRCC	1 cut(s)	1849
BsiEI	CGRYCG	2 cut(s)	116, 2233
BsiSI	CCGG	4 cut(s)	670, 1309, 2036, 2416
BslI	CCNNNNNNNGG	8 cut(s)	221, 629, 1564, 1889, 1976, 2196, 2368, 2411
BsmAI	GTCTC	6 cut(s)	156, 327, 1386, 1910, 1997, 2315
BsnI	GGCC	8 cut(s)	115, 324, 633, 1019, 1147, 1608, 2415, 2775
Bsp13I	TCCGGA	1 cut(s)	1308
Bsp1407I	TGTACA	1 cut(s)	1048
Bsp19I	CCATGG	1 cut(s)	1339
Bsp68I	TCGCGA	1 cut(s)	1596
BspACI	CCGC	7 cut(s)	954, 1513, 1970, 2097, 2229, 2437, 2725
BspANI	GGCC	8 cut(s)	115, 324, 633, 1019, 1147, 1608, 2415, 2775
BspCNI	CTCAG	4 cut(s)	454, 1006, 1878, 2311
BspEI	TCCGGA	1 cut(s)	1308
BspFNI	CGCG	1 cut(s)	1596
BspHI	TCATGA	1 cut(s)	2301
BspLI	GGNNCC	4 cut(s)	1018, 1246, 1517, 1851
BspMAI	CTGCAG	1 cut(s)	2351
BspMI	ACCTGC	1 cut(s)	1861
BspPI	GGATC	5 cut(s)	1160, 1300, 1474, 1940, 2027
BspT107I	GGYRCC	1 cut(s)	1849
BspTI	CTTAAG	1 cut(s)	845
BsrDI	GCAATG	2 cut(s)	1026, 1246
BsrGI	TGTACA	1 cut(s)	1048
BsrI	ACTGG	7 cut(s)	1249, 1420, 1468, 1609, 1837, 1973, 2747
BssECI	CCNNGG	9 cut(s)	648, 774, 1148, 1339, 1502, 1557, 2157, 2405, 2759
BssNI	GRCGYC	1 cut(s)	666
BssT1I	CCWWGG	5 cut(s)	648, 774, 1339, 1502, 2405
Bst2UI	CCWGG	5 cut(s)	630, 927, 1149, 1559, 1935
Bst4CI	ACNGT	6 cut(s)	338, 1173, 1438, 2093, 2620, 2646
Bst6I	CTCTTC	3 cut(s)	726, 1651, 2328
BstACI	GRCGYC	1 cut(s)	666
BstAFI	CTTAAG	1 cut(s)	845
BstAUI	TGTACA	1 cut(s)	1048
BstC8I	GCNNGC	3 cut(s)	974, 1690, 2756
BstDEI	CTNAG	6 cut(s)	23, 433, 462, 993, 1886, 2319
BstDSI	CCRYGG	2 cut(s)	1339, 2157
BstENI	CCTNNNNNAGG	1 cut(s)	627
BstF5I	GGATG	7 cut(s)	85, 740, 1435, 1547, 1948, 2126, 2289
BstFNI	CGCG	1 cut(s)	1596
BstHHI	GCGC	1 cut(s)	2564
BstMAI	GTCTC	6 cut(s)	156, 327, 1386, 1910, 1997, 2315
BstMCI	CGRYCG	2 cut(s)	116, 2233
BstMWI	GCNNNNNNNGC	5 cut(s)	1082, 1969, 2210, 2346, 2734
BstNI	CCWGG	5 cut(s)	630, 927, 1149, 1559, 1935
BstNSI	RCATGY	3 cut(s)	222, 300, 976
BstSCI	CCNGG	7 cut(s)	628, 668, 925, 1147, 1557, 1933, 2035
BstSFI	CTRYAG	2 cut(s)	917, 2347
BstUI	CGCG	1 cut(s)	1596
BstV1I	GCAGC	9 cut(s)	229, 863, 1018, 2111, 2327, 2330, 2333, 2446, 2576
BstV2I	GAAGAC	3 cut(s)	67, 125, 2526
BstX2I	RGATCY	3 cut(s)	1190, 2032, 2503
BstYI	RGATCY	3 cut(s)	1190, 2032, 2503
BstZI	CGGCCG	1 cut(s)	113
Bsu36I	CCTNAGG	2 cut(s)	462, 993
BsuRI	GGCC	8 cut(s)	115, 324, 633, 1019, 1147, 1608, 2415, 2775
BtgI	CCRYGG	2 cut(s)	1339, 2157
BtrI	CACGTC	1 cut(s)	1357
BtsCI	GGATG	7 cut(s)	85, 740, 1435, 1547, 1948, 2126, 2289
BtsI	GCAGTG	1 cut(s)	141
BtsIMutI	CAGTG	4 cut(s)	141, 1883, 2616, 2642
BtuMI	TCGCGA	1 cut(s)	1596
BveI	ACCTGC	1 cut(s)	1861
Cac8I	GCNNGC	3 cut(s)	974, 1690, 2756
CaiI	CAGNNNCTG	1 cut(s)	245
CciI	TCATGA	1 cut(s)	2301
CfoI	GCGC	1 cut(s)	2564
Cfr13I	GGNCC	5 cut(s)	40, 947, 1017, 1273, 2598
CseI	GACGC	2 cut(s)	674, 1715
Csp6I	GTAC	6 cut(s)	458, 1049, 1409, 1670, 2094, 2382
CspCI	CAANNNNNGTGG	2 cut(s)	1542, 1577
CviQI	GTAC	6 cut(s)	458, 1049, 1409, 1670, 2094, 2382
DdeI	CTNAG	6 cut(s)	23, 433, 462, 993, 1886, 2319
DraI	TTTAAA	1 cut(s)	1680
EaeI	YGGCCR	3 cut(s)	113, 1606, 2413
EagI	CGGCCG	1 cut(s)	113
Eam1104I	CTCTTC	3 cut(s)	726, 1651, 2328
EarI	CTCTTC	3 cut(s)	726, 1651, 2328
EciI	GGCGGA	2 cut(s)	1528, 1959
EclXI	CGGCCG	1 cut(s)	113
Eco130I	CCWWGG	5 cut(s)	648, 774, 1339, 1502, 2405
Eco147I	AGGCCT	1 cut(s)	1147
Eco32I	GATATC	1 cut(s)	2744
Eco47I	GGWCC	4 cut(s)	40, 947, 1273, 2598
Eco52I	CGGCCG	1 cut(s)	113
Eco57I	CTGAAG	7 cut(s)	339, 474, 558, 1659, 2202, 2492, 2520
Eco81I	CCTNAGG	2 cut(s)	462, 993
EcoNI	CCTNNNNNAGG	1 cut(s)	627
EcoO109I	RGGNCCY	2 cut(s)	40, 1017
EcoRI	GAATTC	2 cut(s)	1264, 1836
EcoRII	CCWGG	5 cut(s)	628, 925, 1147, 1557, 1933
EcoRV	GATATC	1 cut(s)	2744
EcoT14I	CCWWGG	5 cut(s)	648, 774, 1339, 1502, 2405
EcoT22I	ATGCAT	2 cut(s)	406, 1028
ErhI	CCWWGG	5 cut(s)	648, 774, 1339, 1502, 2405
FalI	AAGNNNNNCTT	2 cut(s)	943, 975
FbaI	TGATCA	1 cut(s)	1987
FblI	GTMKAC	2 cut(s)	916, 1136
FokI	GGATG	7 cut(s)	92, 727, 1442, 1554, 1955, 2113, 2296
FspBI	CTAG	8 cut(s)	825, 1194, 1488, 1733, 1857, 2066, 2379, 2721
FspI	TGCGCA	1 cut(s)	2563
GlaI	GCGC	1 cut(s)	2563
GsaI	CCCAGC	2 cut(s)	759, 2208
HaeIII	GGCC	8 cut(s)	115, 324, 633, 1019, 1147, 1608, 2415, 2775
HapII	CCGG	4 cut(s)	670, 1309, 2036, 2416
HgaI	GACGC	2 cut(s)	674, 1715
HhaI	GCGC	1 cut(s)	2564
Hin1I	GRCGYC	1 cut(s)	666
Hin6I	GCGC	1 cut(s)	2562
HinP1I	GCGC	1 cut(s)	2562
HincII	GTYRAC	4 cut(s)	138, 583, 1137, 2089
HindII	GTYRAC	4 cut(s)	138, 583, 1137, 2089
HindIII	AAGCTT	2 cut(s)	602, 1482
HpaII	CCGG	4 cut(s)	670, 1309, 2036, 2416
HphI	GGTGA	6 cut(s)	252, 524, 1010, 1172, 1803, 2506
Hpy99I	CGWCG	2 cut(s)	1138, 1141
HpyCH4III	ACNGT	6 cut(s)	338, 1173, 1438, 2093, 2620, 2646
HpyCH4IV	ACGT	3 cut(s)	1063, 1356, 1683
HpyF10VI	GCNNNNNNNGC	5 cut(s)	1082, 1969, 2210, 2346, 2734
HpyF3I	CTNAG	6 cut(s)	23, 433, 462, 993, 1886, 2319
HpySE526I	ACGT	3 cut(s)	1063, 1356, 1683
Hsp92I	GRCGYC	1 cut(s)	666
HspAI	GCGC	1 cut(s)	2562
Kpn2I	TCCGGA	1 cut(s)	1308
Ksp22I	TGATCA	1 cut(s)	1987
LmnI	GCTCC	4 cut(s)	841, 956, 1250, 2266
Lsp1109I	GCAGC	9 cut(s)	229, 863, 1018, 2111, 2327, 2330, 2333, 2446, 2576
LweI	GCATC	5 cut(s)	391, 505, 569, 1420, 2549
MaeI	CTAG	8 cut(s)	825, 1194, 1488, 1733, 1857, 2066, 2379, 2721
MaeII	ACGT	3 cut(s)	1063, 1356, 1683
MaeIII	GTNAC	6 cut(s)	258, 878, 1345, 2494, 2620, 2716
MfeI	CAATTG	1 cut(s)	906
MflI	RGATCY	3 cut(s)	1190, 2032, 2503
MlsI	TGGCCA	1 cut(s)	1608
MluNI	TGGCCA	1 cut(s)	1608
MlyI	GAGTC	3 cut(s)	266, 1592, 1814
MmeI	TCCRAC	3 cut(s)	327, 1233, 1341
Mox20I	TGGCCA	1 cut(s)	1608
Mph1103I	ATGCAT	2 cut(s)	406, 1028
MroI	TCCGGA	1 cut(s)	1308
MroXI	GAANNNNTTC	3 cut(s)	448, 2444, 2505
MscI	TGGCCA	1 cut(s)	1608
MseI	TTAA	9 cut(s)	74, 587, 846, 1037, 1098, 1395, 1679, 2315, 2525
MslI	CAYNNNNRTG	2 cut(s)	265, 1209
Msp20I	TGGCCA	1 cut(s)	1608
MspA1I	CMGCKG	3 cut(s)	242, 854, 2437
MspCI	CTTAAG	1 cut(s)	845
MspI	CCGG	4 cut(s)	670, 1309, 2036, 2416
MspR9I	CCNGG	7 cut(s)	630, 670, 927, 1149, 1559, 1935, 2037
MunI	CAATTG	1 cut(s)	906
MvaI	CCWGG	5 cut(s)	630, 927, 1149, 1559, 1935
MvnI	CGCG	1 cut(s)	1596
MwoI	GCNNNNNNNGC	5 cut(s)	1082, 1969, 2210, 2346, 2734
NciI	CCSGG	2 cut(s)	670, 2037
NcoI	CCATGG	1 cut(s)	1339
NlaIV	GGNNCC	4 cut(s)	1018, 1246, 1517, 1851
NmeAIII	GCCGAG	1 cut(s)	2740
NmuCI	GTSAC	2 cut(s)	258, 2494
NruI	TCGCGA	1 cut(s)	1596
NsbI	TGCGCA	1 cut(s)	2563
NsiI	ATGCAT	2 cut(s)	406, 1028
NspI	RCATGY	3 cut(s)	222, 300, 976
PaeI	GCATGC	1 cut(s)	976
PagI	TCATGA	1 cut(s)	2301
PaqCI	CACCTGC	1 cut(s)	1861
PceI	AGGCCT	1 cut(s)	1147
PcsI	WCGNNNNNNNCGW	1 cut(s)	1689
PdmI	GAANNNNTTC	3 cut(s)	448, 2444, 2505
PflMI	CCANNNNNTGG	1 cut(s)	2411
PfoI	TCCNGGA	1 cut(s)	2035
PleI	GAGTC	3 cut(s)	265, 1592, 1814
PpsI	GAGTC	3 cut(s)	265, 1592, 1814
PpuMI	RGGWCCY	1 cut(s)	40
PshBI	ATTAAT	1 cut(s)	74
Psp5II	RGGWCCY	1 cut(s)	40
Psp6I	CCWGG	5 cut(s)	628, 925, 1147, 1557, 1933
PspFI	CCCAGC	2 cut(s)	755, 2204
PspGI	CCWGG	5 cut(s)	628, 925, 1147, 1557, 1933
PspN4I	GGNNCC	4 cut(s)	1018, 1246, 1517, 1851
PspPI	GGNCC	5 cut(s)	40, 947, 1017, 1273, 2598
PspPPI	RGGWCCY	1 cut(s)	40
PsrI	GAACNNNNNNTAC	2 cut(s)	607, 639
PstI	CTGCAG	1 cut(s)	2351
PstNI	CAGNNNCTG	1 cut(s)	245
PsuI	RGATCY	3 cut(s)	1190, 2032, 2503
PvuII	CAGCTG	2 cut(s)	242, 854
RruI	TCGCGA	1 cut(s)	1596
RsaI	GTAC	6 cut(s)	459, 1050, 1410, 1671, 2095, 2383
RsaNI	GTAC	6 cut(s)	458, 1049, 1409, 1670, 2094, 2382
RseI	CAYNNNNRTG	2 cut(s)	265, 1209
SalI	GTCGAC	1 cut(s)	1135
SaqAI	TTAA	9 cut(s)	74, 587, 846, 1037, 1098, 1395, 1679, 2315, 2525
Sau96I	GGNCC	5 cut(s)	40, 947, 1017, 1273, 2598
SchI	GAGTC	3 cut(s)	266, 1592, 1814
ScrFI	CCNGG	7 cut(s)	630, 670, 927, 1149, 1559, 1935, 2037
SfaNI	GCATC	5 cut(s)	391, 505, 569, 1420, 2549
SfcI	CTRYAG	2 cut(s)	917, 2347
SgrDI	CGTCGACG	1 cut(s)	1135
SinI	GGWCC	4 cut(s)	40, 947, 1273, 2598
SmiMI	CAYNNNNRTG	2 cut(s)	265, 1209
SmlI	CTYRAG	5 cut(s)	5, 605, 789, 845, 1579
SmoI	CTYRAG	5 cut(s)	5, 605, 789, 845, 1579
SpeI	ACTAGT	1 cut(s)	2378
SphI	GCATGC	1 cut(s)	976
SseBI	AGGCCT	1 cut(s)	1147
SsiI	CCGC	7 cut(s)	954, 1513, 1970, 2097, 2229, 2437, 2725
SspMI	CTAG	8 cut(s)	825, 1194, 1488, 1733, 1857, 2066, 2379, 2721
StuI	AGGCCT	1 cut(s)	1147
StyD4I	CCNGG	7 cut(s)	628, 668, 925, 1147, 1557, 1933, 2035
StyI	CCWWGG	5 cut(s)	648, 774, 1339, 1502, 2405
TaaI	ACNGT	6 cut(s)	338, 1173, 1438, 2093, 2620, 2646
TaiI	ACGT	3 cut(s)	1066, 1359, 1686
TaqI	TCGA	6 cut(s)	277, 387, 1136, 1479, 2014, 2233
TaqII	GACCGA	1 cut(s)	902
TatI	WGTACW	1 cut(s)	1048
TauI	GCSGC	1 cut(s)	2728
Tru1I	TTAA	9 cut(s)	74, 587, 846, 1037, 1098, 1395, 1679, 2315, 2525
Tru9I	TTAA	9 cut(s)	74, 587, 846, 1037, 1098, 1395, 1679, 2315, 2525
TscAI	CASTG	4 cut(s)	148, 1890, 2623, 2649
TseFI	GTSAC	2 cut(s)	258, 2494
TseI	GCWGC	9 cut(s)	242, 851, 1031, 2099, 2340, 2343, 2346, 2434, 2564
Tsp45I	GTSAC	2 cut(s)	258, 2494
TspGWI	ACGGA	5 cut(s)	1687, 1780, 1832, 2174, 2601
TspRI	CASTG	4 cut(s)	148, 1890, 2623, 2649
Van91I	CCANNNNNTGG	1 cut(s)	2411
Vha464I	CTTAAG	1 cut(s)	845
VpaK11BI	GGWCC	4 cut(s)	40, 947, 1273, 2598
VspI	ATTAAT	1 cut(s)	74
XagI	CCTNNNNNAGG	1 cut(s)	627
XceI	RCATGY	3 cut(s)	222, 300, 976
XcmI	CCANNNNNNNNNTGG	2 cut(s)	53, 1460
XmiI	GTMKAC	2 cut(s)	916, 1136
XmnI	GAANNNNTTC	3 cut(s)	448, 2444, 2505
XspI	CTAG	8 cut(s)	825, 1194, 1488, 1733, 1857, 2066, 2379, 2721
Zsp2I	ATGCAT	2 cut(s)	406, 1028

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.