Rh7BG049800

Plant protein of unknown function (DUF863)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
OG0003065
Physical Location & Seq
Forward (+)
3256632 .. 3262844
6213 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG049800.1

Sequence Viewer

Length: 3462 bp
ATGGGAGCTCATATTCCATGCAGCAGCTATGCCCCAGTATATATCCCCACAATGAATCATAACTTAAGTGCTAATGGCAGTGAGAGGAATCATAATTTGACTTCTGACCAGCTTTTTTGGTATTACAAGGAGGTGTTCAAGCAGACAATGCTCAATCAAGAAATGATATTTAAGAATCAGATTCTGGACCTCCACCGCCTTTATGGAAGACAAAGAGAACTAATGGATGATATAACAAGGAATGAATTAGATAAACATAATCTGGGCACCGAGGTTTCAAGGCGGACTACTTCTTTGTCTCAGACTTCTCTTGTCTGTGCTCAAAAGACATTCAACATCCCTGCATGCAGTCAAGTATCTATTTCAGGTGCTGAAAATATCCAGTCACCTTCATGTTTTCTTCAAGGGAGGAACATAAGGGCATGCTCTTATCCTGCTCAAACTGAAGGCCATTCAGGAGACCGTGAATTTTTGAAATCCAAATGCAAGAAACCTCGGAAGAACTTGGACCTTCGACTTCCAGCTGATACAATATACATTGATAGTGAAGAAGAGGAATTGTTAGAAGACGGAAAGGTTTCTGAAGCAGCTGAGGTATCAAGTTATCCTACTAAGAGAATTCCCGAGGTTGTGTGTAATGGTGATGCAACTAATGGATTCAACTCCGTTTCCAATTATGCCTCAAGTGCTTCATTAGAAAAAGGTTGGGTTGACTTAAATTATCTGTATAAGCTACAGGAAAAAACAGCTCCTGCATCCGATAGTTTTGAGGGGCCCACTGCCGTCGAAGCTTACTCAAATATTCTACTGCAAGGCACAGAAAGCAAACAGGAGTGGTTGTCATCTTATAATTACAATGCTGGGAAAATTCAAAGCAGCTTGTATTCTTTGCCTCAAGGATTTCATGCAGATGACATATCCTCGTCATCTAACTCATTACAGAAGAAGCTTACGCAACAGGAACCGTCATCCTTTCTTCACAATCACCAAAATTCGTCGAGTGAAAGAGCAATGATTGCTGTTCAAAACTTCAGAAGAAATTCTGAAACTAAAAATGATCATCAATCTGGACCAAGTGGAGCTTTGATGTGCACATCATCCCAACATATTCCTCGTGACTGCATGGAAAATTCTGGGTCCTCAGGCATTGCTGCTTTAAGAAAACCTATGCATGACTTGGCACGTACCCAGATTGCAGTTCAAGCACTCCCATGTCTTAACACCTCTATACCACTCAGTAATAACTGTAAATCATCAACATTAAGGCGTGGGCTTGAGGAAGAAAGGTTACAGTTGAAGAAGCATCTGAGGTCTAGTACAAAACATGATGGTACGGTCTCTGACAGTAGCTTTAGCAATGGCTTTGATTTAGAATCCAACAAATCAGGGGCCCAGCCACCATCCATCAGTTCTGATAATCTGATAAGGGTTAATGACGGTTTAGTGCCTGAACTTCATGGAATTACCAGATACCTGCAGGATTCTGCAAATGTCAATGCTCGGAAGGATATAGACTTGAATTTCATGCCTCCTAGCTGTTCTTCGGATGCAGCAGTTTCCCAGAGTTTCCAAACAACTGGAACAGAAAAGCTTGAAGATTCTAATGAGAGGTTTCCTTTGCATAGACCGAAACTTGATTATTATGGGAAAACTGATAAAGGATGTGAAGATTCAAATCAGGCAGAGGCAAGTGACTTCTTGAGTCAACAGATTCATGGGTCTCCTACTTGTGAGACACCTAACATTTCTGGTGATCACTGTTATCATGTCTCAGGCTCCAATCACCATCAGAACTCAGTTCAAGATATCAAGGACAGCAAAAGAGCTGTGCTACTTGATTTAAATGTGCCTTGTGATTCTGTGCACAACAAAGAAGTAGAACTAACTGTTGATGAACATGTGGAAAAGAGTAAATTTAAGAAAGATGCAGGTTTTGGAGTTCACATTGACCTGAACTCATCCATAAATGATGTAGGTTTTGGAGTTCACATTGACCTGAACACATCCGTAAATGAAGATGAGTTTTCAGCAATGTCATCCTCTTCAACAGAGAGTCTTTTGGAGGCACCTGCTAGTCCAGAAAACAAAGAGTGTTCTCCACCGAGAGGCGTCTCATCTGATGGAAATCAAGTTGACACACCTGATCTAATGTCAGGACTGGAAGCTCCAGAAAACAAGGAGTCTTCTCCACCTACAGGAGAATCTGATGAAAATCATGTTGAGATACCTTTTCTATTGTCAGTACAGGAAGATCTCGAACATAAGGTGTGTTCTCAGCCAACAGAATCTGATGAAAAAGTTGACGCACCATCTCCATTGTCAGTACACGAAGATCTCGAACATAAGGTGTGTTCTAGGCCAACAGAATCTGATGAACAAATTGAGACACCTTTTGCATTGTCAGGGCAGGGAGGTCTGCAGAACAAAGAGTGTTCTCAGCCAATAGAATCTGATGAAAATCAAAGTGTGACACCTTTGCCATTGTCAAATATGGAAAGCAAAGATTGTTCTAAGCCTATGGATTCTGATGAAAATCAAATTGAGACACCTTTTCCATCAGGACTGGATGATCTGGAGAGCAAAGATTGTTCTCAGCCTATGGACTCTGATGAAACTCAAATTCAGACACCTTTGCCATTGTCAGGACAGGAAAATCTGGAAACCAAAGAGTGTTCACAGCCAATGGACTCTACTGAAAAACAAATTGAGACACCTTTTCTATTGTCAGGACAGGAAGTGCATCTGGAAGAGGAACTGTTCAGGACTGCTGCAGAATGTTTGGTCACCATTTCATCATCCGTGTGTCATACTTGTTCTGAAAGGACCACATACAAGCCAACTGAAACTTCATCTGATTCCCTAAAGTGGTTTGCTGGTTTAGCGTCTTCAGTTTTAGGCAGTCTAGAAAACGAGGTGGGATGCGGTGATCATCAGGAGGTTCTACCTGATGGAATGGACTACTTTGAGGCCATGACATTGAAGCTACCAGAGTCAAAGGTGGAAGAGTGCTGCTGCTATAGAAGTAATGGCTACAAAGAGGAAGTGATGGTCACAGCTTCATCACAAAGTCAGCCAAAAAAGGGTCGACCTAGAAAAGGAAGGCAACGGAGGAAGGACTTCCAAGGGGAAATTCTCCCTGGCCTTGCTTCTTTGTCAAGGTGTGAGGTGACTGAGGATCTTCAGATCATAGGAACACTAATTGAGGCTTCTGCTGATTGCTCCGAAACTAGATCAGTAAGACATGCAGCTAAATTTGGGTTGGCAAGGGGGAGGAGAAGGTGCACCATTTCTGCTTCCGCTGTAAAAGAGAATACTGCCGCTTCACCTCTGAATCACATCGGTGTCAAAAGGCAATTGGAATGTGAGAAGAGAAGCCTAATTGATTGGGGAGAGGTAACTAGGCGGCGTAGAGGGCAGAGAAATTCGGGTAGTGATCTGCGGCTGATTAGAAACAAGGTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF863

Protein Analysis

1153

Amino Acids

127.38

Weight (kDa)

5.11

Isoelectric Point (pI)

63.26

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF863 PF05904 116 - 254 1.7e-10 Plant protein of unknown function (DUF863)
DUF863 PF05904 263 - 556 3.6e-17 Plant protein of unknown function (DUF863)
DUF863 PF05904 561 - 697 1.1e-08 Plant protein of unknown function (DUF863)
DUF863 PF05904 878 - 1140 4e-57 Plant protein of unknown function (DUF863)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 849
AarI CACCTGC 1 cut(s) 2077
Acc36I ACCTGC 3 cut(s) 1482, 1919, 2077
AccB1I GGYRCC 2 cut(s) 266, 2065
AccI GTMKAC 1 cut(s) 3085
AciI CCGC 7 cut(s) 196, 283, 2922, 3297, 3318, 3403, 3439
AclWI GGATC 1 cut(s) 3183
AcuI CTGAAG 5 cut(s) 465, 603, 1015, 2871, 3164
AcyI GRCGYC 1 cut(s) 2109
AfaI GTAC 5 cut(s) 1186, 1318, 1333, 2244, 2325
AfiI CCNNNNNNNGG 6 cut(s) 2105, 2195, 2642, 2865, 3080, 3095
AflII CTTAAG 1 cut(s) 64
AflIII ACRYGT 1 cut(s) 1897
AjnI CCWGG 1 cut(s) 3136
AjuI GAANNNNNNNTTGG 4 cut(s) 2830, 2862, 3114, 3146
AleI CACNNNNGTG 1 cut(s) 3339
Alw21I GWGCWC 5 cut(s) 10, 322, 1094, 1866, 3284
Alw44I GTGCAC 3 cut(s) 1090, 1862, 3280
AlwI GGATC 1 cut(s) 3183
AlwNI CAGNNNCTG 5 cut(s) 184, 371, 752, 2288, 2369
Ama87I CYCGRG 1 cut(s) 623
AoxI GGCC 6 cut(s) 448, 773, 1389, 2357, 2967, 3139
ApaI GGGCCC 2 cut(s) 777, 1393
ApaLI GTGCAC 3 cut(s) 1090, 1862, 3280
ArsI GACNNNNNNTTYG 2 cut(s) 277, 309
Asp700I GAANNNNTTC 3 cut(s) 577, 1039, 3116
AspS9I GGNCC 9 cut(s) 187, 508, 773, 774, 1070, 1137, 1389, 1390, 2823
AsuHPI GGTGA 9 cut(s) 378, 653, 977, 1763, 1775, 2776, 2936, 3178, 3315
AvaI CYCGRG 1 cut(s) 623
AvaII GGWCC 5 cut(s) 187, 508, 1070, 1137, 2823
AxyI CCTNAGG 1 cut(s) 1141
BaeGI GKGCMC 6 cut(s) 269, 777, 1094, 1393, 1866, 3284
BanI GGYRCC 2 cut(s) 266, 2065
BanII GRGCYC 3 cut(s) 10, 777, 1393
BarI GAAGNNNNNNTAC 2 cut(s) 1272, 1304
BauI CACGAG 1 cut(s) 1113
BbsI GAAGAC 4 cut(s) 214, 573, 2175, 2877
Bbv12I GWGCWC 5 cut(s) 10, 322, 1094, 1866, 3284
BbvCI CCTCAGC 1 cut(s) 591
BccI CCATC 9 cut(s) 1322, 1408, 1412, 1794, 2114, 2317, 2563, 2942, 3040
BceAI ACGGC 1 cut(s) 767
BciT130I CCWGG 1 cut(s) 3138
BclI TGATCA 3 cut(s) 1057, 1753, 2926
BfaI CTAG 8 cut(s) 1314, 1533, 2073, 2355, 2903, 3090, 3228, 3399
BfmI CTRYAG 6 cut(s) 734, 1475, 2193, 2417, 2769, 3016
BfrI CTTAAG 1 cut(s) 64
BfuAI ACCTGC 3 cut(s) 1482, 1919, 2077
BglII AGATCT 2 cut(s) 2251, 2332
Bme1390I CCNGG 1 cut(s) 3138
Bme18I GGWCC 5 cut(s) 187, 508, 1070, 1137, 2823
BmeT110I CYCGRG 1 cut(s) 623
BmgT120I GGNCC 9 cut(s) 187, 508, 773, 774, 1070, 1137, 1389, 1390, 2823
BmiI GGNNCC 9 cut(s) 268, 774, 775, 963, 1138, 1390, 1391, 1777, 2067
BmrFI CCNGG 1 cut(s) 3138
BmrI ACTGGG 1 cut(s) 29
BmsI GCATC 7 cut(s) 634, 764, 1312, 1537, 1915, 2749, 2909
BmuI ACTGGG 1 cut(s) 29
BpiI GAAGAC 4 cut(s) 214, 573, 2175, 2877
BpmI CTGGAG 2 cut(s) 2151, 2594
Bpu10I CCTNAGC 1 cut(s) 591
BpuEI CTTGAG 4 cut(s) 667, 879, 1295, 1720
BsaAI YACGTR 1 cut(s) 1184
BsaBI GATNNNNATC 5 cut(s) 1674, 2124, 2211, 2457, 2532
BsaHI GRCGYC 1 cut(s) 2109
BsaI GGTCTC 3 cut(s) 453, 1342, 1725
BsaJI CCNNGG 5 cut(s) 270, 494, 624, 3121, 3136
BsaXI ACNNNNNCTCC 2 cut(s) 824, 854
Bsc4I CCNNNNNNNGG 6 cut(s) 2105, 2195, 2642, 2865, 3080, 3095
Bse1I ACTGG 5 cut(s) 35, 382, 1582, 2163, 2568
Bse21I CCTNAGG 1 cut(s) 1141
Bse3DI GCAATG 4 cut(s) 1017, 1146, 1363, 2037
Bse8I GATNNNNATC 5 cut(s) 1674, 2124, 2211, 2457, 2532
BseBI CCWGG 1 cut(s) 3138
BseDI CCNNGG 5 cut(s) 270, 494, 624, 3121, 3136
BseJI GATNNNNATC 5 cut(s) 1674, 2124, 2211, 2457, 2532
BseLI CCNNNNNNNGG 6 cut(s) 2105, 2195, 2642, 2865, 3080, 3095
BseMI GCAATG 4 cut(s) 1017, 1146, 1363, 2037
BseNI ACTGG 5 cut(s) 35, 382, 1582, 2163, 2568
BseRI GAGGAG 1 cut(s) 3286
BseSI GKGCMC 6 cut(s) 269, 777, 1094, 1393, 1866, 3284
BseYI CCCAGC 2 cut(s) 860, 1392
BshFI GGCC 6 cut(s) 450, 775, 1391, 2359, 2969, 3141
BshNI GGYRCC 2 cut(s) 266, 2065
BsiHKAI GWGCWC 5 cut(s) 10, 322, 1094, 1866, 3284
BsiHKCI CYCGRG 1 cut(s) 623
BslI CCNNNNNNNGG 6 cut(s) 2105, 2195, 2642, 2865, 3080, 3095
BsmBI CGTCTC 1 cut(s) 2116
BsnI GGCC 6 cut(s) 450, 775, 1391, 2359, 2969, 3141
Bso31I GGTCTC 3 cut(s) 453, 1342, 1725
BsoBI CYCGRG 1 cut(s) 623
Bsp120I GGGCCC 2 cut(s) 773, 1389
Bsp1286I GDGCHC 8 cut(s) 10, 269, 322, 777, 1094, 1393, 1866, 3284
BspACI CCGC 7 cut(s) 196, 283, 2922, 3297, 3318, 3403, 3439
BspANI GGCC 6 cut(s) 450, 775, 1391, 2359, 2969, 3141
BspLI GGNNCC 9 cut(s) 268, 774, 775, 963, 1138, 1390, 1391, 1777, 2067
BspMAI CTGCAG 3 cut(s) 1479, 2421, 2773
BspMI ACCTGC 3 cut(s) 1482, 1919, 2077
BspPI GGATC 1 cut(s) 3183
BspT107I GGYRCC 2 cut(s) 266, 2065
BspTI CTTAAG 1 cut(s) 64
BspTNI GGTCTC 3 cut(s) 453, 1342, 1725
BsrDI GCAATG 4 cut(s) 1017, 1146, 1363, 2037
BsrI ACTGG 5 cut(s) 35, 382, 1582, 2163, 2568
BssECI CCNNGG 5 cut(s) 270, 494, 624, 3121, 3136
BssNI GRCGYC 1 cut(s) 2109
BssSI CACGAG 1 cut(s) 1113
BssT1I CCWWGG 1 cut(s) 3121
Bst2BI CACGAG 1 cut(s) 1113
Bst2UI CCWGG 1 cut(s) 3138
Bst6I CTCTTC 5 cut(s) 546, 2047, 2742, 2997, 3362
BstACI GRCGYC 1 cut(s) 2109
BstAFI CTTAAG 1 cut(s) 64
BstAPI GCANNNNNTGC 2 cut(s) 148, 1016
BstBAI YACGTR 1 cut(s) 1184
BstC8I GCNNGC 2 cut(s) 346, 424
BstEII GGTNACC 1 cut(s) 2782
BstENI CCTNNNNNAGG 1 cut(s) 3093
BstMWI GCNNNNNNNGC 8 cut(s) 148, 686, 788, 822, 1016, 1202, 2879, 3412
BstNI CCWGG 1 cut(s) 3138
BstNSI RCATGY 4 cut(s) 348, 426, 1901, 3245
BstPI GGTNACC 1 cut(s) 2782
BstSCI CCNGG 1 cut(s) 3136
BstSFI CTRYAG 6 cut(s) 734, 1475, 2193, 2417, 2769, 3016
BstSLI GKGCMC 6 cut(s) 269, 777, 1094, 1393, 1866, 3284
BstV2I GAAGAC 4 cut(s) 214, 573, 2175, 2877
BstX2I RGATCY 3 cut(s) 2251, 2332, 3175
BstXI CCANNNNNNTGG 1 cut(s) 1577
BstYI RGATCY 3 cut(s) 2251, 2332, 3175
Bsu36I CCTNAGG 1 cut(s) 1141
BsuRI GGCC 6 cut(s) 450, 775, 1391, 2359, 2969, 3141
BtsI GCAGTG 2 cut(s) 85, 777
BtsIMutI CAGTG 3 cut(s) 85, 777, 1756
BveI ACCTGC 3 cut(s) 1482, 1919, 2077
Cac8I GCNNGC 2 cut(s) 346, 424
CaiI CAGNNNCTG 5 cut(s) 184, 371, 752, 2288, 2369
Cfr13I GGNCC 9 cut(s) 187, 508, 773, 774, 1070, 1137, 1389, 1390, 2823
CseI GACGC 3 cut(s) 2098, 2312, 2871
Csp6I GTAC 5 cut(s) 1185, 1317, 1332, 2243, 2324
CviQI GTAC 5 cut(s) 1185, 1317, 1332, 2243, 2324
DraI TTTAAA 1 cut(s) 1842
Eam1104I CTCTTC 5 cut(s) 546, 2047, 2742, 2997, 3362
EarI CTCTTC 5 cut(s) 546, 2047, 2742, 2997, 3362
EciI GGCGGA 1 cut(s) 298
Ecl136II GAGCTC 1 cut(s) 8
Eco130I CCWWGG 1 cut(s) 3121
Eco24I GRGCYC 3 cut(s) 10, 777, 1393
Eco31I GGTCTC 3 cut(s) 453, 1342, 1725
Eco32I GATATC 1 cut(s) 1807
Eco47I GGWCC 5 cut(s) 187, 508, 1070, 1137, 2823
Eco53kI GAGCTC 1 cut(s) 8
Eco57I CTGAAG 5 cut(s) 465, 603, 1015, 2871, 3164
Eco81I CCTNAGG 1 cut(s) 1141
Eco88I CYCGRG 1 cut(s) 623
Eco91I GGTNACC 1 cut(s) 2782
EcoICRI GAGCTC 1 cut(s) 8
EcoNI CCTNNNNNAGG 1 cut(s) 3093
EcoO109I RGGNCCY 3 cut(s) 773, 1137, 1389
EcoO65I GGTNACC 1 cut(s) 2782
EcoRI GAATTC 1 cut(s) 618
EcoRII CCWGG 1 cut(s) 3136
EcoRV GATATC 1 cut(s) 1807
EcoT14I CCWWGG 1 cut(s) 3121
EcoT22I ATGCAT 1 cut(s) 1173
EcoT38I GRGCYC 3 cut(s) 10, 777, 1393
ErhI CCWWGG 1 cut(s) 3121
Esp3I CGTCTC 1 cut(s) 2116
FalI AAGNNNNNCTT 2 cut(s) 1066, 1098
FbaI TGATCA 3 cut(s) 1057, 1753, 2926
FblI GTMKAC 1 cut(s) 3085
FriOI GRGCYC 3 cut(s) 10, 777, 1393
FspBI CTAG 8 cut(s) 1314, 1533, 2073, 2355, 2903, 3090, 3228, 3399
GsaI CCCAGC 2 cut(s) 864, 1396
GsuI CTGGAG 2 cut(s) 2151, 2594
HaeIII GGCC 6 cut(s) 450, 775, 1391, 2359, 2969, 3141
HgaI GACGC 3 cut(s) 2098, 2312, 2871
Hin1I GRCGYC 1 cut(s) 2109
HincII GTYRAC 5 cut(s) 712, 1706, 2134, 2302, 3086
HindII GTYRAC 5 cut(s) 712, 1706, 2134, 2302, 3086
HindIII AAGCTT 3 cut(s) 789, 947, 1589
HphI GGTGA 9 cut(s) 378, 653, 977, 1763, 1775, 2776, 2936, 3178, 3315
Hpy99I CGWCG 2 cut(s) 788, 1000
HpyAV CCTTC 7 cut(s) 399, 440, 521, 1498, 3093, 3106, 3270
HpyCH4IV ACGT 1 cut(s) 1183
HpyF10VI GCNNNNNNNGC 8 cut(s) 148, 686, 788, 822, 1016, 1202, 2879, 3412
HpySE526I ACGT 1 cut(s) 1183
Hsp92I GRCGYC 1 cut(s) 2109
Ksp22I TGATCA 3 cut(s) 1057, 1753, 2926
LmnI GCTCC 6 cut(s) 5, 754, 1079, 1781, 2170, 3224
LweI GCATC 7 cut(s) 634, 764, 1312, 1537, 1915, 2749, 2909
MaeI CTAG 8 cut(s) 1314, 1533, 2073, 2355, 2903, 3090, 3228, 3399
MaeII ACGT 1 cut(s) 1183
MaeIII GTNAC 9 cut(s) 384, 1115, 1287, 1691, 2467, 2782, 3049, 3166, 3394
MfeI CAATTG 1 cut(s) 3353
MflI RGATCY 3 cut(s) 2251, 2332, 3175
MhlI GDGCHC 8 cut(s) 10, 269, 322, 777, 1094, 1393, 1866, 3284
MlyI GAGTC 6 cut(s) 1711, 2062, 2189, 2597, 2681, 2999
MmeI TCCRAC 1 cut(s) 1401
Mph1103I ATGCAT 1 cut(s) 1173
MroXI GAANNNNTTC 3 cut(s) 577, 1039, 3116
MseI TTAA 9 cut(s) 65, 171, 716, 1157, 1218, 1262, 1431, 1841, 1917
MslI CAYNNNNRTG 5 cut(s) 391, 909, 1210, 2800, 3339
MspA1I CMGCKG 3 cut(s) 524, 590, 3299
MspCI CTTAAG 1 cut(s) 64
MspR9I CCNGG 1 cut(s) 3138
MunI CAATTG 1 cut(s) 3353
MvaI CCWGG 1 cut(s) 3138
MwoI GCNNNNNNNGC 8 cut(s) 148, 686, 788, 822, 1016, 1202, 2879, 3412
NlaIV GGNNCC 9 cut(s) 268, 774, 775, 963, 1138, 1390, 1391, 1777, 2067
NmuCI GTSAC 7 cut(s) 384, 1115, 1691, 2467, 2782, 3049, 3166
NsiI ATGCAT 1 cut(s) 1173
NspI RCATGY 4 cut(s) 348, 426, 1901, 3245
OliI CACNNNNGTG 1 cut(s) 3339
PaeI GCATGC 2 cut(s) 348, 426
PaqCI CACCTGC 1 cut(s) 2077
PciI ACATGT 1 cut(s) 1897
PcsI WCGNNNNNNNCGW 1 cut(s) 2334
PdmI GAANNNNTTC 3 cut(s) 577, 1039, 3116
PleI GAGTC 6 cut(s) 1710, 2061, 2188, 2597, 2681, 2998
PpsI GAGTC 6 cut(s) 1710, 2061, 2188, 2597, 2681, 2998
Ppu21I YACGTR 1 cut(s) 1184
PpuMI RGGWCCY 1 cut(s) 1137
PscI ACATGT 1 cut(s) 1897
PsiI TTATAA 1 cut(s) 849
Psp124BI GAGCTC 1 cut(s) 10
Psp5II RGGWCCY 1 cut(s) 1137
Psp6I CCWGG 1 cut(s) 3136
PspEI GGTNACC 1 cut(s) 2782
PspFI CCCAGC 2 cut(s) 860, 1392
PspGI CCWGG 1 cut(s) 3136
PspN4I GGNNCC 9 cut(s) 268, 774, 775, 963, 1138, 1390, 1391, 1777, 2067
PspOMI GGGCCC 2 cut(s) 773, 1389
PspPI GGNCC 9 cut(s) 187, 508, 773, 774, 1070, 1137, 1389, 1390, 2823
PspPPI RGGWCCY 1 cut(s) 1137
PstI CTGCAG 3 cut(s) 1479, 2421, 2773
PstNI CAGNNNCTG 5 cut(s) 184, 371, 752, 2288, 2369
PsuI RGATCY 3 cut(s) 2251, 2332, 3175
PvuII CAGCTG 2 cut(s) 524, 590
RsaI GTAC 5 cut(s) 1186, 1318, 1333, 2244, 2325
RsaNI GTAC 5 cut(s) 1185, 1317, 1332, 2243, 2324
RseI CAYNNNNRTG 5 cut(s) 391, 909, 1210, 2800, 3339
SacI GAGCTC 1 cut(s) 10
SalI GTCGAC 1 cut(s) 3084
SaqAI TTAA 9 cut(s) 65, 171, 716, 1157, 1218, 1262, 1431, 1841, 1917
Sau96I GGNCC 9 cut(s) 187, 508, 773, 774, 1070, 1137, 1389, 1390, 2823
SbfI CCTGCAGG 1 cut(s) 1479
SchI GAGTC 6 cut(s) 1711, 2062, 2189, 2597, 2681, 2999
ScrFI CCNGG 1 cut(s) 3138
SdaI CCTGCAGG 1 cut(s) 1479
SduI GDGCHC 8 cut(s) 10, 269, 322, 777, 1094, 1393, 1866, 3284
SfaNI GCATC 7 cut(s) 634, 764, 1312, 1537, 1915, 2749, 2909
SfcI CTRYAG 6 cut(s) 734, 1475, 2193, 2417, 2769, 3016
SinI GGWCC 5 cut(s) 187, 508, 1070, 1137, 2823
SmiI ATTTAAAT 1 cut(s) 1842
SmiMI CAYNNNNRTG 5 cut(s) 391, 909, 1210, 2800, 3339
SmlI CTYRAG 5 cut(s) 64, 682, 894, 1274, 1699
SmoI CTYRAG 5 cut(s) 64, 682, 894, 1274, 1699
SphI GCATGC 2 cut(s) 348, 426
Sse8387I CCTGCAGG 1 cut(s) 1479
SsiI CCGC 7 cut(s) 196, 283, 2922, 3297, 3318, 3403, 3439
SspI AATATT 1 cut(s) 802
SspMI CTAG 8 cut(s) 1314, 1533, 2073, 2355, 2903, 3090, 3228, 3399
SstI GAGCTC 1 cut(s) 10
StyD4I CCNGG 1 cut(s) 3136
StyI CCWWGG 1 cut(s) 3121
SwaI ATTTAAAT 1 cut(s) 1842
TaiI ACGT 1 cut(s) 1186
TaqI TCGA 6 cut(s) 514, 786, 998, 2256, 2337, 3085
TaqII GACCGA 1 cut(s) 1642
TatI WGTACW 3 cut(s) 1316, 2242, 2323
TauI GCSGC 3 cut(s) 3320, 3406, 3442
Tru1I TTAA 9 cut(s) 65, 171, 716, 1157, 1218, 1262, 1431, 1841, 1917
Tru9I TTAA 9 cut(s) 65, 171, 716, 1157, 1218, 1262, 1431, 1841, 1917
TscAI CASTG 3 cut(s) 85, 784, 1763
TseFI GTSAC 7 cut(s) 384, 1115, 1691, 2467, 2782, 3049, 3166
Tsp45I GTSAC 7 cut(s) 384, 1115, 1691, 2467, 2782, 3049, 3166
TspGWI ACGGA 5 cut(s) 585, 655, 1996, 2788, 3121
TspRI CASTG 3 cut(s) 85, 784, 1763
Vha464I CTTAAG 1 cut(s) 64
VneI GTGCAC 3 cut(s) 1090, 1862, 3280
VpaK11BI GGWCC 5 cut(s) 187, 508, 1070, 1137, 2823
XagI CCTNNNNNAGG 1 cut(s) 3093
XbaI TCTAGA 1 cut(s) 2902
XceI RCATGY 4 cut(s) 348, 426, 1901, 3245
XcmI CCANNNNNNNNNTGG 1 cut(s) 200
XmiI GTMKAC 1 cut(s) 3085
XmnI GAANNNNTTC 3 cut(s) 577, 1039, 3116
XspI CTAG 8 cut(s) 1314, 1533, 2073, 2355, 2903, 3090, 3228, 3399
Zsp2I ATGCAT 1 cut(s) 1173
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.