FvH4_5g18580

Alcohol dehydrogenase-like

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
Physical Location & Seq
Reverse (-)
10683349 .. 10686541
3193 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g18580.t2

Sequence Viewer

Length: 1149 bp
ATGTCATTGCCTTGCGTACAACCGCCTAAACAACCAAATGTCATCACCTGCAAAGCTGCGGTGGCGTGGGGACCCGGGAAGCCTTTGGTGATAGAGGAAGTGGATGTGAGTCCACCTCAGCCATCCGAGATAAGGATCAGAATTGTCTGCACCTCTCTCTGTCGCAGTGACCTCACTGCCTGGGAATCCCAGGCTATCTTTCCGCGGATATTCGGCCATGAAGCAACAGGGATCGTTGAGAGTGTTGGCGAGGGAGTGACTGAATTTACAGAAGGGGACCATGTGCTAACAGTCTTCACTGGAGAATGTGGAACATGCAGGCAATGTGTATCGGGTAAAAGCAACTTATGCCAAGTACTGGGCCTAGAACGGAGAGGTGTAATGCATAGTGATCAGGGGACACGGTTCGCCATAAATGGGAAACCGGTATATCATTATTGTGCAGTTTCGAGTTTCAGTGAGTATACTGTCGTGCACTCTGGATGTGCAGTCAAAATAAACCCAATTGTGCCTCTGGACAAAGTATGCCTTCTCAGTTGTGGAGTAGCTGCAGGCTTGGGTGCAGCTTGGAATGTTGCTAGGATATCTAATGGATCAAGTGTGGTGATATTTGGTCTTGGAACCGTAGGCCTTTCTGTTGCACAGGGTGCTAAGCTTAGGGGAGCATCAGCAATAATTGGTGTCGACACTAATCCTGAAAAGGAAGAAAAAGCAAAAGCTTTTGGAATTACTGAGTTTATTAACCCAAATGACAGTAAAGAACCAGTTCAACAGGTTATTAAGGATCTCACAGGTGGAGGGGCAGATTACGCATTTGAATGTATAGGTGACACAGGAACGGTAACTACTGCACTGCAGGCTTGTTGCGATGGATGGGGATTGACTGTGACACTTGGTGTGCCAAAAGTAAAGCCACAAGTATCTGCTCATTATGGAATATTTCTTACTGGAAGAACATTGAAAGGGTCTCTTTTTGGAGGATGGAAACCTAAATCTGATCTCCCTTCATTAGTTGACATGTACATGAAAAAGGAAATCCAAGTTGATGAGTACATAACACATAACCTGTCATTTAGAGATATCAACAAAGCTTTTGATCTGATGAGAGAAGGGAAGTGTTTGCGCTGTGTTATGCACATGGAAAAGTAG

Protein Analysis

383

Amino Acids

40.94

Weight (kDa)

6.7

Isoelectric Point (pI)

37.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ADH_N PF08240 50 - 175 2.9e-20 Alcohol dehydrogenase GroES-like domain
ADH_zinc_N PF00107 218 - 349 8.6e-26 Zinc-binding dehydrogenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 56
Acc36I ACCTGC 1 cut(s) 56
AccB7I CCANNNNNTGG 1 cut(s) 358
AccI GTMKAC 2 cut(s) 464, 684
AccII CGCG 1 cut(s) 205
AciI CCGC 4 cut(s) 23, 59, 203, 205
AclWI GGATC 4 cut(s) 143, 239, 601, 792
AcoI YGGCCR 1 cut(s) 214
AcsI RAATTY 1 cut(s) 263
AdeI CACNNNGTG 2 cut(s) 647, 896
AfaI GTAC 4 cut(s) 18, 357, 1022, 1052
AfiI CCNNNNNNNGG 3 cut(s) 132, 358, 417
AflIII ACRYGT 1 cut(s) 1017
AgeI ACCGGT 1 cut(s) 424
AgsI TTSAA 3 cut(s) 770, 818, 961
AjnI CCWGG 2 cut(s) 179, 189
AluBI AGCT 6 cut(s) 56, 548, 566, 655, 719, 1091
AluI AGCT 6 cut(s) 56, 548, 566, 655, 719, 1091
Alw21I GWGCWC 1 cut(s) 477
Alw26I GTCTC 1 cut(s) 972
Alw44I GTGCAC 1 cut(s) 473
AlwI GGATC 4 cut(s) 143, 239, 601, 792
Ama87I CYCGRG 1 cut(s) 74
AoxI GGCC 3 cut(s) 214, 361, 628
ApaLI GTGCAC 1 cut(s) 473
ApeKI GCWGC 3 cut(s) 56, 548, 563
ApoI RAATTY 1 cut(s) 263
AsiGI ACCGGT 1 cut(s) 424
Asp700I GAANNNNTTC 1 cut(s) 765
AspLEI GCGC 1 cut(s) 1125
AspS9I GGNCC 3 cut(s) 71, 277, 361
AsuC2I CCSGG 2 cut(s) 75, 76
AsuHPI GGTGA 4 cut(s) 37, 100, 616, 839
AvaI CYCGRG 1 cut(s) 74
AvaII GGWCC 2 cut(s) 71, 277
BaeGI GKGCMC 1 cut(s) 477
BbsI GAAGAC 1 cut(s) 286
Bbv12I GWGCWC 1 cut(s) 477
BbvCI CCTCAGC 1 cut(s) 117
BbvI GCAGC 3 cut(s) 43, 535, 575
BccI CCATC 4 cut(s) 130, 863, 867, 975
BciT130I CCWGG 2 cut(s) 181, 191
BclI TGATCA 1 cut(s) 391
BcnI CCSGG 2 cut(s) 75, 76
BcoDI GTCTC 1 cut(s) 972
BfaI CTAG 2 cut(s) 365, 579
BfmI CTRYAG 2 cut(s) 549, 854
BfuAI ACCTGC 1 cut(s) 56
BisI GCNGC 3 cut(s) 57, 549, 564
BlpI GCTNAGC 1 cut(s) 651
BlsI GCNGC 3 cut(s) 58, 550, 565
BmcAI AGTACT 1 cut(s) 357
Bme1390I CCNGG 4 cut(s) 75, 76, 181, 191
Bme18I GGWCC 2 cut(s) 71, 277
BmeT110I CYCGRG 1 cut(s) 74
BmgT120I GGNCC 3 cut(s) 71, 277, 361
BmiI GGNNCC 4 cut(s) 72, 73, 278, 622
BmrFI CCNGG 4 cut(s) 75, 76, 181, 191
BmrI ACTGGG 1 cut(s) 368
BmsI GCATC 1 cut(s) 674
BmuI ACTGGG 1 cut(s) 368
BpiI GAAGAC 1 cut(s) 286
BplI GAGNNNNNCTC 2 cut(s) 100, 132
BpmI CTGGAG 1 cut(s) 321
Bpu10I CCTNAGC 2 cut(s) 117, 656
Bpu1102I GCTNAGC 1 cut(s) 651
BpuMI CCSGG 2 cut(s) 75, 76
BsaBI GATNNNNATC 1 cut(s) 134
BsaI GGTCTC 1 cut(s) 972
BsaJI CCNNGG 4 cut(s) 74, 180, 189, 203
BsaWI WCCGGW 1 cut(s) 424
Bsc4I CCNNNNNNNGG 3 cut(s) 132, 358, 417
Bse118I RCCGGY 1 cut(s) 424
Bse1I ACTGG 4 cut(s) 304, 363, 764, 952
Bse3DI GCAATG 2 cut(s) 5, 329
Bse8I GATNNNNATC 1 cut(s) 134
BseBI CCWGG 2 cut(s) 181, 191
BseDI CCNNGG 4 cut(s) 74, 180, 189, 203
BseGI GGATG 5 cut(s) 109, 122, 488, 878, 986
BseJI GATNNNNATC 1 cut(s) 134
BseLI CCNNNNNNNGG 3 cut(s) 132, 358, 417
BseMI GCAATG 2 cut(s) 5, 329
BseMII CTCAG 3 cut(s) 131, 547, 723
BseNI ACTGG 4 cut(s) 304, 363, 764, 952
BseSI GKGCMC 1 cut(s) 477
BseXI GCAGC 3 cut(s) 43, 535, 575
BsgI GTGCAG 5 cut(s) 133, 462, 507, 582, 834
Bsh1236I CGCG 1 cut(s) 205
BshFI GGCC 3 cut(s) 216, 363, 630
BshTI ACCGGT 1 cut(s) 424
BsiHKAI GWGCWC 1 cut(s) 477
BsiHKCI CYCGRG 1 cut(s) 74
BsiSI CCGG 2 cut(s) 75, 425
BslFI GGGAC 3 cut(s) 84, 290, 412
BslI CCNNNNNNNGG 3 cut(s) 132, 358, 417
BsmAI GTCTC 1 cut(s) 972
BsmFI GGGAC 3 cut(s) 84, 290, 412
BsnI GGCC 3 cut(s) 216, 363, 630
Bso31I GGTCTC 1 cut(s) 972
BsoBI CYCGRG 1 cut(s) 74
Bsp1286I GDGCHC 1 cut(s) 477
Bsp1407I TGTACA 1 cut(s) 1020
Bsp143I GATC 7 cut(s) 135, 231, 391, 593, 784, 997, 1096
Bsp1720I GCTNAGC 1 cut(s) 651
BspACI CCGC 4 cut(s) 23, 59, 203, 205
BspANI GGCC 3 cut(s) 216, 363, 630
BspCNI CTCAG 3 cut(s) 130, 546, 724
BspFNI CGCG 1 cut(s) 205
BspLI GGNNCC 4 cut(s) 72, 73, 278, 622
BspMAI CTGCAG 2 cut(s) 553, 858
BspMI ACCTGC 1 cut(s) 56
BspPI GGATC 4 cut(s) 143, 239, 601, 792
BspTNI GGTCTC 1 cut(s) 972
BsrDI GCAATG 2 cut(s) 5, 329
BsrFI RCCGGY 1 cut(s) 424
BsrGI TGTACA 1 cut(s) 1020
BsrI ACTGG 4 cut(s) 304, 363, 764, 952
BssAI RCCGGY 1 cut(s) 424
BssECI CCNNGG 4 cut(s) 74, 180, 189, 203
BssMI GATC 7 cut(s) 135, 231, 391, 593, 784, 997, 1096
BssNAI GTATAC 1 cut(s) 465
Bst1107I GTATAC 1 cut(s) 465
Bst2UI CCWGG 2 cut(s) 181, 191
Bst4CI ACNGT 7 cut(s) 292, 405, 469, 625, 755, 841, 886
BstAPI GCANNNNNTGC 2 cut(s) 348, 647
BstAUI TGTACA 1 cut(s) 1020
BstC8I GCNNGC 3 cut(s) 320, 553, 858
BstDEI CTNAG 5 cut(s) 117, 533, 651, 656, 732
BstDSI CCRYGG 1 cut(s) 203
BstF5I GGATG 5 cut(s) 109, 122, 488, 878, 986
BstFNI CGCG 1 cut(s) 205
BstHHI GCGC 1 cut(s) 1125
BstKTI GATC 7 cut(s) 138, 234, 394, 596, 787, 1000, 1099
BstMAI GTCTC 1 cut(s) 972
BstMBI GATC 7 cut(s) 135, 231, 391, 593, 784, 997, 1096
BstMWI GCNNNNNNNGC 5 cut(s) 62, 348, 647, 809, 857
BstNI CCWGG 2 cut(s) 181, 191
BstNSI RCATGY 2 cut(s) 318, 1021
BstSCI CCNGG 4 cut(s) 73, 74, 179, 189
BstSFI CTRYAG 2 cut(s) 549, 854
BstSLI GKGCMC 1 cut(s) 477
BstUI CGCG 1 cut(s) 205
BstV1I GCAGC 3 cut(s) 43, 535, 575
BstV2I GAAGAC 1 cut(s) 286
BstX2I RGATCY 1 cut(s) 784
BstYI RGATCY 1 cut(s) 784
BstZ17I GTATAC 1 cut(s) 465
BsuRI GGCC 3 cut(s) 216, 363, 630
BtgI CCRYGG 1 cut(s) 203
BtgZI GCGATG 1 cut(s) 882
BtsCI GGATG 5 cut(s) 109, 122, 488, 878, 986
BtsI GCAGTG 3 cut(s) 172, 174, 851
BtsIMutI CAGTG 5 cut(s) 172, 174, 297, 463, 851
BveI ACCTGC 1 cut(s) 56
Cac8I GCNNGC 3 cut(s) 320, 553, 858
CfoI GCGC 1 cut(s) 1125
Cfr10I RCCGGY 1 cut(s) 424
Cfr13I GGNCC 3 cut(s) 71, 277, 361
Cfr42I CCGCGG 1 cut(s) 206
Cfr9I CCCGGG 1 cut(s) 74
Csp6I GTAC 4 cut(s) 17, 356, 1021, 1051
CspAI ACCGGT 1 cut(s) 424
CviAII CATG 6 cut(s) 218, 281, 315, 1018, 1024, 1138
CviQI GTAC 4 cut(s) 17, 356, 1021, 1051
DdeI CTNAG 5 cut(s) 117, 533, 651, 656, 732
DpnI GATC 7 cut(s) 137, 233, 393, 595, 786, 999, 1098
DpnII GATC 7 cut(s) 135, 231, 391, 593, 784, 997, 1096
DraIII CACNNNGTG 2 cut(s) 647, 896
EaeI YGGCCR 1 cut(s) 214
Eco147I AGGCCT 1 cut(s) 630
Eco31I GGTCTC 1 cut(s) 972
Eco32I GATATC 2 cut(s) 585, 1081
Eco47I GGWCC 2 cut(s) 71, 277
Eco88I CYCGRG 1 cut(s) 74
EcoO109I RGGNCCY 1 cut(s) 71
EcoRII CCWGG 2 cut(s) 179, 189
EcoRV GATATC 2 cut(s) 585, 1081
EcoT22I ATGCAT 1 cut(s) 387
FaeI CATG 6 cut(s) 221, 284, 318, 1021, 1027, 1141
FalI AAGNNNNNCTT 4 cut(s) 513, 545, 954, 986
FaqI GGGAC 3 cut(s) 84, 290, 412
FatI CATG 6 cut(s) 217, 280, 314, 1017, 1023, 1137
FbaI TGATCA 1 cut(s) 391
FblI GTMKAC 2 cut(s) 464, 684
Fnu4HI GCNGC 3 cut(s) 57, 549, 564
FokI GGATG 5 cut(s) 109, 116, 495, 885, 993
Fsp4HI GCNGC 3 cut(s) 57, 549, 564
FspBI CTAG 2 cut(s) 365, 579
GlaI GCGC 1 cut(s) 1124
GluI GCNGC 3 cut(s) 57, 549, 564
GsuI CTGGAG 1 cut(s) 321
HaeIII GGCC 3 cut(s) 216, 363, 630
HapII CCGG 2 cut(s) 75, 425
HhaI GCGC 1 cut(s) 1125
Hin1II CATG 6 cut(s) 221, 284, 318, 1021, 1027, 1141
Hin6I GCGC 1 cut(s) 1123
HinP1I GCGC 1 cut(s) 1123
HincII GTYRAC 2 cut(s) 685, 1015
HindII GTYRAC 2 cut(s) 685, 1015
HindIII AAGCTT 3 cut(s) 653, 717, 1089
HinfI GANTC 2 cut(s) 109, 185
HpaII CCGG 2 cut(s) 75, 425
HphI GGTGA 4 cut(s) 37, 100, 616, 839
Hpy166II GTNNAC 5 cut(s) 113, 465, 475, 685, 1015
Hpy188I TCNGA 4 cut(s) 127, 140, 997, 1101
Hpy188III TCNNGA 3 cut(s) 480, 515, 695
Hpy8I GTNNAC 5 cut(s) 113, 465, 475, 685, 1015
HpyAV CCTTC 4 cut(s) 266, 539, 1014, 1103
HpyCH4III ACNGT 7 cut(s) 292, 405, 469, 625, 755, 841, 886
HpyF10VI GCNNNNNNNGC 5 cut(s) 62, 348, 647, 809, 857
HpyF3I CTNAG 5 cut(s) 117, 533, 651, 656, 732
Hsp92II CATG 6 cut(s) 221, 284, 318, 1021, 1027, 1141
HspAI GCGC 1 cut(s) 1123
KflI GGGWCCC 1 cut(s) 71
Ksp22I TGATCA 1 cut(s) 391
KspI CCGCGG 1 cut(s) 206
Kzo9I GATC 7 cut(s) 135, 231, 391, 593, 784, 997, 1096
LmnI GCTCC 1 cut(s) 662
Lsp1109I GCAGC 3 cut(s) 43, 535, 575
LweI GCATC 1 cut(s) 674
MaeI CTAG 2 cut(s) 365, 579
MaeIII GTNAC 5 cut(s) 167, 256, 827, 841, 886
MalI GATC 7 cut(s) 137, 233, 393, 595, 786, 999, 1098
MboI GATC 7 cut(s) 135, 231, 391, 593, 784, 997, 1096
MboII GAAGA 3 cut(s) 286, 716, 963
MfeI CAATTG 1 cut(s) 504
MflI RGATCY 1 cut(s) 784
MhlI GDGCHC 1 cut(s) 477
MluCI AATT 5 cut(s) 141, 263, 504, 675, 726
MlyI GAGTC 1 cut(s) 118
MnlI CCTC 9 cut(s) 88, 126, 163, 182, 244, 368, 522, 791, 971
Mph1103I ATGCAT 1 cut(s) 387
MroXI GAANNNNTTC 1 cut(s) 765
MseI TTAA 2 cut(s) 741, 780
MslI CAYNNNNRTG 3 cut(s) 438, 817, 1022
MspA1I CMGCKG 1 cut(s) 205
MspI CCGG 2 cut(s) 75, 425
MspR9I CCNGG 4 cut(s) 75, 76, 181, 191
MunI CAATTG 1 cut(s) 504
MvaI CCWGG 2 cut(s) 181, 191
MvnI CGCG 1 cut(s) 205
MwoI GCNNNNNNNGC 5 cut(s) 62, 348, 647, 809, 857
NciI CCSGG 2 cut(s) 75, 76
NdeII GATC 7 cut(s) 135, 231, 391, 593, 784, 997, 1096
NlaIII CATG 6 cut(s) 221, 284, 318, 1021, 1027, 1141
NlaIV GGNNCC 4 cut(s) 72, 73, 278, 622
NmuCI GTSAC 4 cut(s) 167, 256, 827, 886
NsiI ATGCAT 1 cut(s) 387
NspI RCATGY 2 cut(s) 318, 1021
PaqCI CACCTGC 1 cut(s) 56
PceI AGGCCT 1 cut(s) 630
PciI ACATGT 1 cut(s) 1017
PdmI GAANNNNTTC 1 cut(s) 765
PfeI GAWTC 1 cut(s) 185
PflMI CCANNNNNTGG 1 cut(s) 358
PinAI ACCGGT 1 cut(s) 424
PkrI GCNGC 3 cut(s) 58, 550, 565
PleI GAGTC 1 cut(s) 117
PpsI GAGTC 1 cut(s) 117
PpuMI RGGWCCY 1 cut(s) 71
PscI ACATGT 1 cut(s) 1017
Psp5II RGGWCCY 1 cut(s) 71
Psp6I CCWGG 2 cut(s) 179, 189
PspGI CCWGG 2 cut(s) 179, 189
PspN4I GGNNCC 4 cut(s) 72, 73, 278, 622
PspPI GGNCC 3 cut(s) 71, 277, 361
PspPPI RGGWCCY 1 cut(s) 71
PsrI GAACNNNNNNTAC 2 cut(s) 829, 861
PstI CTGCAG 2 cut(s) 553, 858
PsuI RGATCY 1 cut(s) 784
RsaI GTAC 4 cut(s) 18, 357, 1022, 1052
RsaNI GTAC 4 cut(s) 17, 356, 1021, 1051
RseI CAYNNNNRTG 3 cut(s) 438, 817, 1022
SacII CCGCGG 1 cut(s) 206
SalI GTCGAC 1 cut(s) 683
SaqAI TTAA 2 cut(s) 741, 780
SatI GCNGC 3 cut(s) 57, 549, 564
Sau3AI GATC 7 cut(s) 135, 231, 391, 593, 784, 997, 1096
Sau96I GGNCC 3 cut(s) 71, 277, 361
ScaI AGTACT 1 cut(s) 357
SchI GAGTC 1 cut(s) 118
ScrFI CCNGG 4 cut(s) 75, 76, 181, 191
SduI GDGCHC 1 cut(s) 477
SfaNI GCATC 1 cut(s) 674
SfcI CTRYAG 2 cut(s) 549, 854
Sfr303I CCGCGG 1 cut(s) 206
SgrBI CCGCGG 1 cut(s) 206
SinI GGWCC 2 cut(s) 71, 277
SmaI CCCGGG 1 cut(s) 76
SmiMI CAYNNNNRTG 3 cut(s) 438, 817, 1022
Sse9I AATT 5 cut(s) 141, 263, 504, 675, 726
SseBI AGGCCT 1 cut(s) 630
SsiI CCGC 4 cut(s) 23, 59, 203, 205
SspI AATATT 1 cut(s) 939
SspMI CTAG 2 cut(s) 365, 579
StuI AGGCCT 1 cut(s) 630
StyD4I CCNGG 4 cut(s) 73, 74, 179, 189
TaaI ACNGT 7 cut(s) 292, 405, 469, 625, 755, 841, 886
TaqI TCGA 2 cut(s) 449, 684
TasI AATT 5 cut(s) 141, 263, 504, 675, 726
TatI WGTACW 3 cut(s) 355, 1020, 1050
TfiI GAWTC 1 cut(s) 185
Tru1I TTAA 2 cut(s) 741, 780
Tru9I TTAA 2 cut(s) 741, 780
TscAI CASTG 5 cut(s) 172, 181, 304, 463, 858
TseFI GTSAC 4 cut(s) 167, 256, 827, 886
TseI GCWGC 3 cut(s) 56, 548, 563
Tsp45I GTSAC 4 cut(s) 167, 256, 827, 886
TspDTI ATGAA 3 cut(s) 234, 996, 1040
TspGWI ACGGA 1 cut(s) 385
TspMI CCCGGG 1 cut(s) 74
TspRI CASTG 5 cut(s) 172, 181, 304, 463, 858
Van91I CCANNNNNTGG 1 cut(s) 358
VneI GTGCAC 1 cut(s) 473
VpaK11BI GGWCC 2 cut(s) 71, 277
XapI RAATTY 1 cut(s) 263
XceI RCATGY 2 cut(s) 318, 1021
XmaI CCCGGG 1 cut(s) 74
XmiI GTMKAC 2 cut(s) 464, 684
XmnI GAANNNNTTC 1 cut(s) 765
XspI CTAG 2 cut(s) 365, 579
ZrmI AGTACT 1 cut(s) 357
Zsp2I ATGCAT 1 cut(s) 387
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.