pycom2874g00090

Alcohol dehydrogenase-like

Basic Information

Type: gene
Biological Identity
pyrus_communis
tig00002874
Physical Location & Seq
Forward (+)
72497 .. 73471
975 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom2874g00090.4

Sequence Viewer

Length: 432 bp
ATGGATCTTCCCACGGCTATGCTTCTAAGTGTGGTGATATTCGGTCTTGGGACAGTAGGCCTTTCTGTTTCACAGGGTGCAAAGCTTAGGGGAGCATCTCAAATAATTGGTGTTGACACTAATCCTGAAAAGGGTGAAAATGCTAAAGCTTTTGGAATTACAGAATTTATCAACCCAAATGACAGCAAAGAACCTATTCAACAGGTTATTAAGCATCTGACAGGCGGTGGAGCTGATTACTCATTTGAATGTATAGGTGACACTGGGATGGTAACTACTGCATTGCAGGCATGTTGCGATGGATGGGGTTTGACAGTTACACTTGGTGTGCCAAAAGTGAAGCCCGAAATAACAGCTCATTATGGAGCATTTCTTATTGGAAGAACATTGAAGGGATCGATCGTTACGCCTATTTGGAGGATGGAAACCTAA

Protein Analysis

144

Amino Acids

15.05

Weight (kDa)

5.6

Isoelectric Point (pI)

20.49

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 225
AclWI GGATC 2 cut(s) 12, 403
AcsI RAATTY 1 cut(s) 164
AdeI CACNNNGTG 2 cut(s) 77, 326
AfiI CCNNNNNNNGG 1 cut(s) 131
AgsI TTSAA 3 cut(s) 200, 248, 391
AluBI AGCT 4 cut(s) 85, 149, 233, 356
AluI AGCT 4 cut(s) 85, 149, 233, 356
AlwI GGATC 2 cut(s) 12, 403
AoxI GGCC 1 cut(s) 58
ApoI RAATTY 1 cut(s) 164
Asp700I GAANNNNTTC 1 cut(s) 195
AsuHPI GGTGA 3 cut(s) 46, 146, 269
BccI CCATC 4 cut(s) 262, 293, 297, 415
BceAI ACGGC 1 cut(s) 30
BmrI ACTGGG 1 cut(s) 273
BmsI GCATC 2 cut(s) 104, 223
BmuI ACTGGG 1 cut(s) 273
Bpu10I CCTNAGC 1 cut(s) 86
Bsa29I ATCGAT 1 cut(s) 398
BsaJI CCNNGG 1 cut(s) 12
Bsc4I CCNNNNNNNGG 1 cut(s) 131
Bse1I ACTGG 1 cut(s) 268
Bse3DI GCAATG 1 cut(s) 281
BseCI ATCGAT 1 cut(s) 398
BseDI CCNNGG 1 cut(s) 12
BseGI GGATG 3 cut(s) 273, 308, 426
BseLI CCNNNNNNNGG 1 cut(s) 131
BseMI GCAATG 1 cut(s) 281
BseNI ACTGG 1 cut(s) 268
Bsh1285I CGRYCG 1 cut(s) 402
BshFI GGCC 1 cut(s) 60
BshVI ATCGAT 1 cut(s) 398
BsiEI CGRYCG 1 cut(s) 402
BslFI GGGAC 1 cut(s) 64
BslI CCNNNNNNNGG 1 cut(s) 131
BsmFI GGGAC 1 cut(s) 64
BsnI GGCC 1 cut(s) 60
Bsp143I GATC 3 cut(s) 4, 395, 399
BspACI CCGC 1 cut(s) 225
BspANI GGCC 1 cut(s) 60
BspDI ATCGAT 1 cut(s) 398
BspPI GGATC 2 cut(s) 12, 403
BsrDI GCAATG 1 cut(s) 281
BsrI ACTGG 1 cut(s) 268
BssECI CCNNGG 1 cut(s) 12
BssMI GATC 3 cut(s) 4, 395, 399
Bst4CI ACNGT 2 cut(s) 55, 316
BstC8I GCNNGC 1 cut(s) 288
BstDEI CTNAG 2 cut(s) 26, 86
BstDSI CCRYGG 1 cut(s) 12
BstF5I GGATG 3 cut(s) 273, 308, 426
BstKTI GATC 3 cut(s) 7, 398, 402
BstMBI GATC 3 cut(s) 4, 395, 399
BstMCI CGRYCG 1 cut(s) 402
BstMWI GCNNNNNNNGC 1 cut(s) 287
BstNSI RCATGY 1 cut(s) 294
BstX2I RGATCY 1 cut(s) 4
BstYI RGATCY 1 cut(s) 4
Bsu15I ATCGAT 1 cut(s) 398
BsuRI GGCC 1 cut(s) 60
BsuTUI ATCGAT 1 cut(s) 398
BtgI CCRYGG 1 cut(s) 12
BtgZI GCGATG 1 cut(s) 312
BtsCI GGATG 3 cut(s) 273, 308, 426
BtsIMutI CAGTG 1 cut(s) 261
Cac8I GCNNGC 1 cut(s) 288
ClaI ATCGAT 1 cut(s) 398
CviAII CATG 1 cut(s) 291
CviJI RGCY 7 cut(s) 17, 60, 85, 149, 233, 343, 356
CviKI_1 RGCY 7 cut(s) 17, 60, 85, 149, 233, 343, 356
DdeI CTNAG 2 cut(s) 26, 86
DpnI GATC 3 cut(s) 6, 397, 401
DpnII GATC 3 cut(s) 4, 395, 399
DraIII CACNNNGTG 2 cut(s) 77, 326
Eco147I AGGCCT 1 cut(s) 60
FaeI CATG 1 cut(s) 294
FaiI YATR 4 cut(s) 20, 254, 292, 363
FaqI GGGAC 1 cut(s) 64
FatI CATG 1 cut(s) 290
FokI GGATG 2 cut(s) 280, 315
HaeIII GGCC 1 cut(s) 60
Hin1II CATG 1 cut(s) 294
HincII GTYRAC 1 cut(s) 115
HindII GTYRAC 1 cut(s) 115
HindIII AAGCTT 2 cut(s) 83, 147
HphI GGTGA 3 cut(s) 46, 146, 269
Hpy166II GTNNAC 1 cut(s) 115
Hpy188I TCNGA 1 cut(s) 219
Hpy188III TCNNGA 1 cut(s) 125
Hpy8I GTNNAC 1 cut(s) 115
HpyAV CCTTC 1 cut(s) 385
HpyCH4III ACNGT 2 cut(s) 55, 316
HpyCH4V TGCA 3 cut(s) 80, 281, 286
HpyF10VI GCNNNNNNNGC 1 cut(s) 287
HpyF3I CTNAG 2 cut(s) 26, 86
Hsp92II CATG 1 cut(s) 294
Kzo9I GATC 3 cut(s) 4, 395, 399
LmnI GCTCC 3 cut(s) 92, 230, 365
LpnPI CCDG 6 cut(s) 59, 138, 188, 207, 249, 272
LweI GCATC 2 cut(s) 104, 223
MaeIII GTNAC 4 cut(s) 257, 271, 316, 403
MalI GATC 3 cut(s) 6, 397, 401
MboI GATC 3 cut(s) 4, 395, 399
MboII GAAGA 1 cut(s) 393
MflI RGATCY 1 cut(s) 4
MluCI AATT 3 cut(s) 105, 156, 164
MnlI CCTC 1 cut(s) 411
MroXI GAANNNNTTC 1 cut(s) 195
MseI TTAA 1 cut(s) 210
MslI CAYNNNNRTG 3 cut(s) 17, 247, 266
MwoI GCNNNNNNNGC 1 cut(s) 287
NdeII GATC 3 cut(s) 4, 395, 399
NlaIII CATG 1 cut(s) 294
NmuCI GTSAC 1 cut(s) 257
NspI RCATGY 1 cut(s) 294
PceI AGGCCT 1 cut(s) 60
PdmI GAANNNNTTC 1 cut(s) 195
Ple19I CGATCG 1 cut(s) 402
PsuI RGATCY 1 cut(s) 4
PvuI CGATCG 1 cut(s) 402
RseI CAYNNNNRTG 3 cut(s) 17, 247, 266
SaqAI TTAA 1 cut(s) 210
Sau3AI GATC 3 cut(s) 4, 395, 399
SetI ASST 8 cut(s) 87, 151, 196, 207, 235, 259, 358, 431
SfaNI GCATC 2 cut(s) 104, 223
SmiMI CAYNNNNRTG 3 cut(s) 17, 247, 266
Sse9I AATT 3 cut(s) 105, 156, 164
SseBI AGGCCT 1 cut(s) 60
SsiI CCGC 1 cut(s) 225
StuI AGGCCT 1 cut(s) 60
TaaI ACNGT 2 cut(s) 55, 316
TaqI TCGA 1 cut(s) 398
TaqII GACCGA 1 cut(s) 32
TasI AATT 3 cut(s) 105, 156, 164
Tru1I TTAA 1 cut(s) 210
Tru9I TTAA 1 cut(s) 210
TscAI CASTG 1 cut(s) 268
TseFI GTSAC 1 cut(s) 257
Tsp45I GTSAC 1 cut(s) 257
TspRI CASTG 1 cut(s) 268
XapI RAATTY 1 cut(s) 164
XceI RCATGY 1 cut(s) 294
XmnI GAANNNNTTC 1 cut(s) 195
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.