Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0015809

Physical Location & Seq

Genomic Coordinates Forward (+)

11820973 .. 11822982

Gene Structure 2010 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g20040.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2010 bp

ATGACATCTCTCAGAAGAAGCACAAGAGCACAGCCCTCACTGCTTCTCACAACTCTTTTCCCTAATGCCAAAAACCAAACCTCTCCCCTCTCCACCGTCACAACCCACCACCCACAACCCAATCAAACCAAACAAGCCATTCCTCCACACAAAACCCACCTGGTTTCACCAACCCAACTTTGCAATGAGTCTAACCACTTCGATCACCACCAATTTCGCAATATCATTAAGTCGAATAAGTTGATCACCAGCCACATTCGGTCCGGGGATTTAGATTCTGCACTTAAGGTGTTTGAGAAAATGACTGTTAGAACCACAACCAGTTGGAACTCGATTTTAGCCGGGTTTACGAAAATTCCAGGGAAAGTTAAAGAAGCCCGCCAACTGTTTGATAAAATTCCTGAACCAGACACTTGCTCGTATAATATTATGTTGGCTTGTTATTTACGTAATCTTGGTGTTGGGTCTGCTATGGAGTTCTTTGGTACAATGCCGGTTAAGGACATTGCGTCTTGGAATACCATGATATCGGGTTTTGCTCAGAATGGGGAGATGAGGGAAGCACAGAAGTTGTTTTTATTGATGCCGGAGAAGAACAGTGTCTCGTGGAGTGCGTTGGTTTCGGGGTATGTGAAATGTGGGGATTTGGACTCGGCGGTGAAGTGGTTTGAGCTTGCACCGGTTAAGAGTGTTGTGGCGTGGACGGCTATGGTTACTGGGTATATGAAGTTTGGGAAGGTTGGAGTGGCTGAGAAGTTGTTTAGAGAGATGCCCGAGAAAAATTTAGTGACATGGAATGCTATGGTTGCGGGGTATGTGGAAAACTGTCGAGCTGAAGAGGGTTTGAAGCTTTTCAGTAAATTGATTGGATATGGGGTGAGGCCAAATGCATCAAGTTTGAGTAGTGCTCTACTGGGTTGTAGCAACCTGTCGGCGCTGCAAATGGGCAGGCAAGTACATCAGCTACTATATAAGTTTGAATTATATAATGGTACAACTTCAGGAACTGCATTGGTTAGTATGTATTGTAAGTGTGGGAATTTGGAGGATGCATGGAAGTTTTTCATTGAGATGACACGAAAAGATGTTGTTACTTGGAATGCAATGATTGCTGGCTATGCTCATCATGGGGAAGGTTTAAAAGCTCTCAGTTTGTTTGACCAGATGAGGAATGAGGGAGTTAACCCAGATTGGATCACATTTGTGTCTGTGTTAATGGCTTGCAATCATGCTGGACTTGTAGACCTTGGGGTTCAATACTTTGATACCATGGCACCAGAGTATCAAGTTGAAGCTAAGCCAGAGCACTATACATGTATGGTAGACCTTCTTGGTCGTGCTGGTAAGCTAGTTGAAGCTGTAGAATTGATAAAGAAAATGCCATTTGAACCACATTCTGCTATTTTTGGAACTCTGTTGGGTGCCTGTCGGGTGCACAAGAACTTACAGTTAGCTGAGTTCGCTGCTGAGAAATTGCTTGATCTTGATCCAACAAGTGCAGCAGGTTATGTTCAACTTGCTAATGTTTATGCTGCAACAAATAGATGGGAACTTGTAGCGAAGGTCAGGCGATCAATGAAAGAAAATAGGGTTGTGAAGACACCTGGCTACAGTTGGATTGAGGTCAAGAGTGTAGTCCATGAGTTCAGATCAGGTGACAGGGCTCACCCAGATTTGGCATCTATTCACAGAAAACTGGCTGAGCTGGATCAGAAAATGAAGTTGGCAGGCTATGTTCCAGATCTTGAATTTGCATTACATGATGTTGGGGAAGAGCAGAAACAGCAGTTGCTACTATGGCACAGTGAAAAACTAGCAATTGCTTTTGGGCTTATACATGTGCCTTCAGGGACGCCAATCCGCATTTTCAAAAACTTGAGAGTATGTGGGGACTGCCATCATGCAATCAAGTATATATCAGTCATTGAGAAAAGAGAAATCATTCTCAGAGATACTACAAGGTTCCATCAGTTTAAAAATGGGGTTTGTTCTTGTGGAGATTACTGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000959 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1900864 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

670

Amino Acids

75.05

Weight (kDa)

8.87

Isoelectric Point (pI)

36.01

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	167 - 199	3.8e-06	PPR repeat family
PPR	PF01535	171 - 199	6.1e-08	PPR repeat
PPR_2	PF13041	230 - 261	6.6e-06	PPR repeat family
PPR	PF01535	232 - 261	5.5e-06	PPR repeat
PPR_2	PF13041	261 - 308	1.6e-06	PPR repeat family
PPR_2	PF13041	361 - 408	2.6e-13	PPR repeat family
PPR	PF01535	364 - 394	5.8e-09	PPR repeat
E_motif	PF20431	479 - 541	6.7e-17	E motif
DYW_deaminase	PF14432	577 - 669	4.2e-43	DYW family of nucleic acid deaminases

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015809)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G16835
fragaria_vesca	FvH4_5g20040
malus_domestica	MD04G1050300.v1.1 MD06G1049600.v1.1
prunus_persica	Prupe.5G060100_v2.0.a1
pyrus_communis	pycom06g04210
rosa_chinensis	RchiOBHm_Chr7g0204911
rosa_laevigata	RLG00000003422
rosa_multiflora	Rmu_co8139782.1_g000001 Rmu_co8234171.1_g000001 Rmu_sc0002180.1_g000004
rosa_roxburghii	Rroxscaffold_3G00252680
rosa_rugosa	Rorug07G0086500
rosa_samantha	Rh7BG214100
rosa_wichuraiana	Rw7G018830

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1493
AccB1I	GGYRCC	2 cut(s)	1273, 1421
AccI	GTMKAC	2 cut(s)	1242, 1323
AciI	CCGC	4 cut(s)	379, 656, 809, 1861
AclWI	GGATC	3 cut(s)	1202, 1481, 1716
AcsI	RAATTY	5 cut(s)	354, 396, 781, 1039, 1748
AcuI	CTGAAG	3 cut(s)	855, 984, 1830
AcyI	GRCGYC	1 cut(s)	1853
AfaI	GTAC	3 cut(s)	487, 957, 994
AfiI	CCNNNNNNNGG	1 cut(s)	1675
AflII	CTTAAG	1 cut(s)	284
AflIII	ACRYGT	2 cut(s)	1313, 1837
AgeI	ACCGGT	1 cut(s)	679
AgsI	TTSAA	9 cut(s)	847, 980, 1256, 1292, 1355, 1388, 1514, 1748, 1870
AhdI	GACNNNNNGTC	1 cut(s)	508
AjnI	CCWGG	3 cut(s)	159, 358, 1603
AjuI	GAANNNNNNNTTGG	2 cut(s)	1706, 1738
AleI	CACNNNNGTG	1 cut(s)	1202
Alw21I	GWGCWC	4 cut(s)	31, 910, 1308, 1437
Alw26I	GTCTC	1 cut(s)	607
Alw44I	GTGCAC	1 cut(s)	1433
AlwI	GGATC	3 cut(s)	1202, 1481, 1716
AlwNI	CAGNNNCTG	1 cut(s)	1007
Ama87I	CYCGRG	1 cut(s)	773
AoxI	GGCC	1 cut(s)	881
ApaLI	GTGCAC	1 cut(s)	1433
ApeKI	GCWGC	4 cut(s)	937, 1463, 1499, 1532
ApoI	RAATTY	5 cut(s)	354, 396, 781, 1039, 1748
AsiGI	ACCGGT	1 cut(s)	679
Asp700I	GAANNNNTTC	3 cut(s)	851, 1061, 1941
AspLEI	GCGC	1 cut(s)	937
AspS9I	GGNCC	1 cut(s)	261
AsuC2I	CCSGG	2 cut(s)	265, 343
AsuHPI	GGTGA	7 cut(s)	159, 197, 238, 670, 889, 1658, 1667
AvaI	CYCGRG	1 cut(s)	773
AvaII	GGWCC	1 cut(s)	261
BaeGI	GKGCMC	1 cut(s)	1437
BaeI	ACNNNNGTAYC	2 cut(s)	1265, 1298
BanI	GGYRCC	2 cut(s)	1273, 1421
BanII	GRGCYC	1 cut(s)	1666
BauI	CACGAG	1 cut(s)	604
BbsI	GAAGAC	1 cut(s)	1604
Bbv12I	GWGCWC	4 cut(s)	31, 910, 1308, 1437
BbvI	GCAGC	4 cut(s)	924, 1450, 1511, 1519
BccI	CCATC	3 cut(s)	1539, 1905, 1974
BceAI	ACGGC	1 cut(s)	720
BciT130I	CCWGG	3 cut(s)	161, 360, 1605
BclI	TGATCA	1 cut(s)	243
BcnI	CCSGG	2 cut(s)	265, 343
BcoDI	GTCTC	1 cut(s)	607
BfaI	CTAG	2 cut(s)	1349, 1814
BfmI	CTRYAG	2 cut(s)	1359, 1609
BfoI	RGCGCY	1 cut(s)	938
BfrI	CTTAAG	1 cut(s)	284
BfuAI	ACCTGC	1 cut(s)	1493
BglII	AGATCT	1 cut(s)	1741
BisI	GCNGC	4 cut(s)	938, 1464, 1500, 1533
BlpI	GCTNAGC	2 cut(s)	1296, 1701
BlsI	GCNGC	4 cut(s)	939, 1465, 1501, 1534
Bme1390I	CCNGG	5 cut(s)	161, 265, 343, 360, 1605
Bme18I	GGWCC	1 cut(s)	261
BmeRI	GACNNNNNGTC	1 cut(s)	508
BmeT110I	CYCGRG	1 cut(s)	773
BmgT120I	GGNCC	1 cut(s)	261
BmiI	GGNNCC	3 cut(s)	1275, 1423, 1964
BmrFI	CCNGG	5 cut(s)	161, 265, 343, 360, 1605
BmrI	ACTGGG	2 cut(s)	726, 923
BmsI	GCATC	5 cut(s)	573, 759, 899, 1039, 1688
BmuI	ACTGGG	2 cut(s)	726, 923
BpiI	GAAGAC	1 cut(s)	1604
BplI	GAGNNNNNCTC	2 cut(s)	892, 924
Bpu1102I	GCTNAGC	2 cut(s)	1296, 1701
BpuEI	CTTGAG	1 cut(s)	1897
BpuMI	CCSGG	2 cut(s)	265, 343
BsaAI	YACGTR	1 cut(s)	449
BsaBI	GATNNNNATC	1 cut(s)	1485
BsaHI	GRCGYC	1 cut(s)	1853
BsaJI	CCNNGG	4 cut(s)	264, 359, 1246, 1269
BsaWI	WCCGGW	1 cut(s)	679
Bsc4I	CCNNNNNNNGG	1 cut(s)	1675
Bse118I	RCCGGY	2 cut(s)	493, 679
Bse1I	ACTGG	5 cut(s)	321, 721, 918, 1701, 2009
Bse3DI	GCAATG	3 cut(s)	190, 504, 1110
Bse8I	GATNNNNATC	1 cut(s)	1485
BseBI	CCWGG	3 cut(s)	161, 360, 1605
BseDI	CCNNGG	4 cut(s)	264, 359, 1246, 1269
BseGI	GGATG	1 cut(s)	1054
BseJI	GATNNNNATC	1 cut(s)	1485
BseLI	CCNNNNNNNGG	1 cut(s)	1675
BseMI	GCAATG	3 cut(s)	190, 504, 1110
BseMII	CTCAG	8 cut(s)	25, 554, 741, 1162, 1446, 1458, 1692, 1960
BseNI	ACTGG	5 cut(s)	321, 721, 918, 1701, 2009
BseSI	GKGCMC	1 cut(s)	1437
BseXI	GCAGC	4 cut(s)	924, 1450, 1511, 1519
BsgI	GTGCAG	2 cut(s)	264, 1518
BshFI	GGCC	1 cut(s)	883
BshNI	GGYRCC	2 cut(s)	1273, 1421
BshTI	ACCGGT	1 cut(s)	679
BsiHKAI	GWGCWC	4 cut(s)	31, 910, 1308, 1437
BsiHKCI	CYCGRG	1 cut(s)	773
BsiSI	CCGG	5 cut(s)	264, 342, 494, 587, 680
BslFI	GGGAC	2 cut(s)	1864, 1904
BslI	CCNNNNNNNGG	1 cut(s)	1675
BsmAI	GTCTC	1 cut(s)	607
BsmFI	GGGAC	2 cut(s)	1864, 1904
BsmI	GAATGC	2 cut(s)	802, 1105
BsnI	GGCC	1 cut(s)	883
BsoBI	CYCGRG	1 cut(s)	773
Bsp1286I	GDGCHC	5 cut(s)	31, 910, 1308, 1437, 1666
Bsp143I	GATC	9 cut(s)	202, 243, 1194, 1480, 1486, 1571, 1649, 1708, 1741
Bsp1720I	GCTNAGC	2 cut(s)	1296, 1701
Bsp19I	CCATGG	1 cut(s)	1269
BspACI	CCGC	4 cut(s)	379, 656, 809, 1861
BspANI	GGCC	1 cut(s)	883
BspCNI	CTCAG	8 cut(s)	24, 553, 742, 1161, 1447, 1459, 1693, 1959
BspLI	GGNNCC	3 cut(s)	1275, 1423, 1964
BspMI	ACCTGC	1 cut(s)	1493
BspPI	GGATC	3 cut(s)	1202, 1481, 1716
BspQI	GCTCTTC	1 cut(s)	1767
BspT107I	GGYRCC	2 cut(s)	1273, 1421
BspTI	CTTAAG	1 cut(s)	284
BsrDI	GCAATG	3 cut(s)	190, 504, 1110
BsrFI	RCCGGY	2 cut(s)	493, 679
BsrI	ACTGG	5 cut(s)	321, 721, 918, 1701, 2009
BssAI	RCCGGY	2 cut(s)	493, 679
BssECI	CCNNGG	4 cut(s)	264, 359, 1246, 1269
BssMI	GATC	9 cut(s)	202, 243, 1194, 1480, 1486, 1571, 1649, 1708, 1741
BssNI	GRCGYC	1 cut(s)	1853
BssSI	CACGAG	1 cut(s)	604
BssT1I	CCWWGG	2 cut(s)	1246, 1269
Bst2BI	CACGAG	1 cut(s)	604
Bst2UI	CCWGG	3 cut(s)	161, 360, 1605
Bst4CI	ACNGT	8 cut(s)	97, 307, 387, 599, 827, 1449, 1613, 1805
Bst6I	CTCTTC	2 cut(s)	831, 1767
BstACI	GRCGYC	1 cut(s)	1853
BstAFI	CTTAAG	1 cut(s)	284
BstAPI	GCANNNNNTGC	1 cut(s)	1109
BstBAI	YACGTR	1 cut(s)	449
BstC8I	GCNNGC	6 cut(s)	379, 675, 950, 1114, 1222, 1729
BstDEI	CTNAG	9 cut(s)	11, 540, 750, 1148, 1296, 1455, 1467, 1701, 1946
BstDSI	CCRYGG	1 cut(s)	1269
BstF5I	GGATG	1 cut(s)	1054
BstH2I	RGCGCY	1 cut(s)	938
BstHHI	GCGC	1 cut(s)	937
BstKTI	GATC	9 cut(s)	205, 246, 1197, 1483, 1489, 1574, 1652, 1711, 1744
BstMAI	GTCTC	1 cut(s)	607
BstMBI	GATC	9 cut(s)	202, 243, 1194, 1480, 1486, 1571, 1649, 1708, 1741
BstMWI	GCNNNNNNNGC	8 cut(s)	40, 704, 806, 1109, 1118, 1460, 1783, 1798
BstNI	CCWGG	3 cut(s)	161, 360, 1605
BstNSI	RCATGY	2 cut(s)	1317, 1841
BstSCI	CCNGG	5 cut(s)	159, 263, 341, 358, 1603
BstSFI	CTRYAG	2 cut(s)	1359, 1609
BstSLI	GKGCMC	1 cut(s)	1437
BstSNI	TACGTA	1 cut(s)	449
BstV1I	GCAGC	4 cut(s)	924, 1450, 1511, 1519
BstV2I	GAAGAC	1 cut(s)	1604
BstX2I	RGATCY	1 cut(s)	1741
BstYI	RGATCY	1 cut(s)	1741
BsuRI	GGCC	1 cut(s)	883
BtgI	CCRYGG	1 cut(s)	1269
BtsCI	GGATG	1 cut(s)	1054
BtsI	GCAGTG	1 cut(s)	38
BtsIMutI	CAGTG	3 cut(s)	38, 604, 1810
BveI	ACCTGC	1 cut(s)	1493
Cac8I	GCNNGC	6 cut(s)	379, 675, 950, 1114, 1222, 1729
CaiI	CAGNNNCTG	1 cut(s)	1007
CfoI	GCGC	1 cut(s)	937
Cfr10I	RCCGGY	2 cut(s)	493, 679
Cfr13I	GGNCC	1 cut(s)	261
CpoI	CGGWCCG	1 cut(s)	261
CseI	GACGC	2 cut(s)	498, 1861
CsiI	ACCWGGT	1 cut(s)	159
Csp6I	GTAC	3 cut(s)	486, 956, 993
CspAI	ACCGGT	1 cut(s)	679
CspI	CGGWCCG	1 cut(s)	261
CviQI	GTAC	3 cut(s)	486, 956, 993
DdeI	CTNAG	9 cut(s)	11, 540, 750, 1148, 1296, 1455, 1467, 1701, 1946
DpnI	GATC	9 cut(s)	204, 245, 1196, 1482, 1488, 1573, 1651, 1710, 1743
DpnII	GATC	9 cut(s)	202, 243, 1194, 1480, 1486, 1571, 1649, 1708, 1741
DraI	TTTAAA	2 cut(s)	1140, 1975
DriI	GACNNNNNGTC	1 cut(s)	508
Eam1104I	CTCTTC	2 cut(s)	831, 1767
Eam1105I	GACNNNNNGTC	1 cut(s)	508
EarI	CTCTTC	2 cut(s)	831, 1767
Eco105I	TACGTA	1 cut(s)	449
Eco130I	CCWWGG	2 cut(s)	1246, 1269
Eco24I	GRGCYC	1 cut(s)	1666
Eco32I	GATATC	1 cut(s)	528
Eco47I	GGWCC	1 cut(s)	261
Eco57I	CTGAAG	3 cut(s)	855, 984, 1830
Eco88I	CYCGRG	1 cut(s)	773
EcoRII	CCWGG	3 cut(s)	159, 358, 1603
EcoRV	GATATC	1 cut(s)	528
EcoT14I	CCWWGG	2 cut(s)	1246, 1269
EcoT22I	ATGCAT	2 cut(s)	892, 1054
EcoT38I	GRGCYC	1 cut(s)	1666
ErhI	CCWWGG	2 cut(s)	1246, 1269
FaqI	GGGAC	2 cut(s)	1864, 1904
FauI	CCCGC	2 cut(s)	386, 802
FbaI	TGATCA	1 cut(s)	243
FblI	GTMKAC	2 cut(s)	1242, 1323
Fnu4HI	GCNGC	4 cut(s)	938, 1464, 1500, 1533
FokI	GGATG	1 cut(s)	1061
FriOI	GRGCYC	1 cut(s)	1666
Fsp4HI	GCNGC	4 cut(s)	938, 1464, 1500, 1533
FspBI	CTAG	2 cut(s)	1349, 1814
GlaI	GCGC	1 cut(s)	936
GluI	GCNGC	4 cut(s)	938, 1464, 1500, 1533
HaeII	RGCGCY	1 cut(s)	938
HaeIII	GGCC	1 cut(s)	883
HapII	CCGG	5 cut(s)	264, 342, 494, 587, 680
HgaI	GACGC	2 cut(s)	498, 1861
HhaI	GCGC	1 cut(s)	937
Hin1I	GRCGYC	1 cut(s)	1853
Hin6I	GCGC	1 cut(s)	935
HinP1I	GCGC	1 cut(s)	935
HincII	GTYRAC	1 cut(s)	1183
HindII	GTYRAC	1 cut(s)	1183
HindIII	AAGCTT	1 cut(s)	848
HinfI	GANTC	3 cut(s)	188, 275, 650
HpaI	GTTAAC	1 cut(s)	1183
HpaII	CCGG	5 cut(s)	264, 342, 494, 587, 680
HphI	GGTGA	7 cut(s)	159, 197, 238, 670, 889, 1658, 1667
Hpy166II	GTNNAC	6 cut(s)	348, 702, 1183, 1243, 1324, 1435
Hpy188I	TCNGA	5 cut(s)	14, 543, 1649, 1713, 1949
Hpy188III	TCNNGA	6 cut(s)	401, 1002, 1484, 1627, 1739, 1745
Hpy8I	GTNNAC	6 cut(s)	348, 702, 1183, 1243, 1324, 1435
HpyAV	CCTTC	5 cut(s)	730, 1127, 1337, 1555, 1854
HpyCH4III	ACNGT	8 cut(s)	97, 307, 387, 599, 827, 1449, 1613, 1805
HpyCH4IV	ACGT	1 cut(s)	448
HpyF10VI	GCNNNNNNNGC	8 cut(s)	40, 704, 806, 1109, 1118, 1460, 1783, 1798
HpyF3I	CTNAG	9 cut(s)	11, 540, 750, 1148, 1296, 1455, 1467, 1701, 1946
HpySE526I	ACGT	1 cut(s)	448
Hsp92I	GRCGYC	1 cut(s)	1853
HspAI	GCGC	1 cut(s)	935
Ksp22I	TGATCA	1 cut(s)	243
KspAI	GTTAAC	1 cut(s)	1183
Kzo9I	GATC	9 cut(s)	202, 243, 1194, 1480, 1486, 1571, 1649, 1708, 1741
LguI	GCTCTTC	1 cut(s)	1767
Lsp1109I	GCAGC	4 cut(s)	924, 1450, 1511, 1519
LweI	GCATC	5 cut(s)	573, 759, 899, 1039, 1688
MabI	ACCWGGT	1 cut(s)	159
MaeI	CTAG	2 cut(s)	1349, 1814
MaeII	ACGT	1 cut(s)	448
MaeIII	GTNAC	5 cut(s)	97, 712, 787, 1090, 1655
MalI	GATC	9 cut(s)	204, 245, 1196, 1482, 1488, 1573, 1651, 1710, 1743
MboI	GATC	9 cut(s)	202, 243, 1194, 1480, 1486, 1571, 1649, 1708, 1741
MboII	GAAGA	5 cut(s)	27, 604, 848, 1609, 1784
MfeI	CAATTG	1 cut(s)	1818
MflI	RGATCY	1 cut(s)	1741
MhlI	GDGCHC	5 cut(s)	31, 910, 1308, 1437, 1666
MlyI	GAGTC	2 cut(s)	197, 644
MmeI	TCCRAC	4 cut(s)	305, 721, 1514, 1595
Mph1103I	ATGCAT	2 cut(s)	892, 1054
MroXI	GAANNNNTTC	3 cut(s)	851, 1061, 1941
MseI	TTAA	9 cut(s)	228, 285, 369, 498, 684, 1139, 1182, 1214, 1974
MslI	CAYNNNNRTG	2 cut(s)	1070, 1202
MspCI	CTTAAG	1 cut(s)	284
MspI	CCGG	5 cut(s)	264, 342, 494, 587, 680
MspR9I	CCNGG	5 cut(s)	161, 265, 343, 360, 1605
MunI	CAATTG	1 cut(s)	1818
Mva1269I	GAATGC	2 cut(s)	802, 1105
MvaI	CCWGG	3 cut(s)	161, 360, 1605
MwoI	GCNNNNNNNGC	8 cut(s)	40, 704, 806, 1109, 1118, 1460, 1783, 1798
NciI	CCSGG	2 cut(s)	265, 343
NcoI	CCATGG	1 cut(s)	1269
NdeII	GATC	9 cut(s)	202, 243, 1194, 1480, 1486, 1571, 1649, 1708, 1741
NlaIV	GGNNCC	3 cut(s)	1275, 1423, 1964
NmeAIII	GCCGAG	1 cut(s)	632
NmuCI	GTSAC	3 cut(s)	97, 787, 1655
NsiI	ATGCAT	2 cut(s)	892, 1054
NspI	RCATGY	2 cut(s)	1317, 1841
OliI	CACNNNNGTG	1 cut(s)	1202
PciI	ACATGT	2 cut(s)	1313, 1837
PciSI	GCTCTTC	1 cut(s)	1767
PcsI	WCGNNNNNNNCGW	1 cut(s)	611
PctI	GAATGC	2 cut(s)	802, 1105
PdmI	GAANNNNTTC	3 cut(s)	851, 1061, 1941
PfeI	GAWTC	1 cut(s)	275
PinAI	ACCGGT	1 cut(s)	679
PkrI	GCNGC	4 cut(s)	939, 1465, 1501, 1534
PleI	GAGTC	2 cut(s)	196, 644
PpsI	GAGTC	2 cut(s)	196, 644
Ppu21I	YACGTR	1 cut(s)	449
PscI	ACATGT	2 cut(s)	1313, 1837
Psp6I	CCWGG	3 cut(s)	159, 358, 1603
PspGI	CCWGG	3 cut(s)	159, 358, 1603
PspN4I	GGNNCC	3 cut(s)	1275, 1423, 1964
PspPI	GGNCC	1 cut(s)	261
PstNI	CAGNNNCTG	1 cut(s)	1007
PsuI	RGATCY	1 cut(s)	1741
RsaI	GTAC	3 cut(s)	487, 957, 994
RsaNI	GTAC	3 cut(s)	486, 956, 993
RseI	CAYNNNNRTG	2 cut(s)	1070, 1202
Rsr2I	CGGWCCG	1 cut(s)	261
RsrII	CGGWCCG	1 cut(s)	261
SapI	GCTCTTC	1 cut(s)	1767
SaqAI	TTAA	9 cut(s)	228, 285, 369, 498, 684, 1139, 1182, 1214, 1974
SatI	GCNGC	4 cut(s)	938, 1464, 1500, 1533
Sau3AI	GATC	9 cut(s)	202, 243, 1194, 1480, 1486, 1571, 1649, 1708, 1741
Sau96I	GGNCC	1 cut(s)	261
SchI	GAGTC	2 cut(s)	197, 644
ScrFI	CCNGG	5 cut(s)	161, 265, 343, 360, 1605
SduI	GDGCHC	5 cut(s)	31, 910, 1308, 1437, 1666
SexAI	ACCWGGT	1 cut(s)	159
SfaNI	GCATC	5 cut(s)	573, 759, 899, 1039, 1688
SfcI	CTRYAG	2 cut(s)	1359, 1609
SinI	GGWCC	1 cut(s)	261
SmiMI	CAYNNNNRTG	2 cut(s)	1070, 1202
SmlI	CTYRAG	2 cut(s)	284, 1876
SmoI	CTYRAG	2 cut(s)	284, 1876
SnaBI	TACGTA	1 cut(s)	449
SsiI	CCGC	4 cut(s)	379, 656, 809, 1861
SspI	AATATT	1 cut(s)	427
SspMI	CTAG	2 cut(s)	1349, 1814
StyD4I	CCNGG	5 cut(s)	159, 263, 341, 358, 1603
StyI	CCWWGG	2 cut(s)	1246, 1269
TaaI	ACNGT	8 cut(s)	97, 307, 387, 599, 827, 1449, 1613, 1805
TaiI	ACGT	1 cut(s)	451
TaqI	TCGA	4 cut(s)	201, 233, 332, 829
TaqII	GACCGA	1 cut(s)	249
TatI	WGTACW	1 cut(s)	955
TfiI	GAWTC	1 cut(s)	275
Tru1I	TTAA	9 cut(s)	228, 285, 369, 498, 684, 1139, 1182, 1214, 1974
Tru9I	TTAA	9 cut(s)	228, 285, 369, 498, 684, 1139, 1182, 1214, 1974
TscAI	CASTG	3 cut(s)	45, 604, 1810
TseFI	GTSAC	3 cut(s)	97, 787, 1655
TseI	GCWGC	4 cut(s)	937, 1463, 1499, 1532
Tsp45I	GTSAC	3 cut(s)	97, 787, 1655
TspDTI	ATGAA	4 cut(s)	740, 1054, 1592, 1733
TspRI	CASTG	3 cut(s)	45, 604, 1810
Vha464I	CTTAAG	1 cut(s)	284
VneI	GTGCAC	1 cut(s)	1433
VpaK11BI	GGWCC	1 cut(s)	261
XapI	RAATTY	5 cut(s)	354, 396, 781, 1039, 1748
XceI	RCATGY	2 cut(s)	1317, 1841
XmiI	GTMKAC	2 cut(s)	1242, 1323
XmnI	GAANNNNTTC	3 cut(s)	851, 1061, 1941
XspI	CTAG	2 cut(s)	1349, 1814
Zsp2I	ATGCAT	2 cut(s)	892, 1054

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.