Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0002180.1

Orthogroup ID

OG0015809

Physical Location & Seq

Genomic Coordinates Reverse (-)

28745 .. 30478

Gene Structure 1734 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0002180.1_g000004.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1734 bp

atgagatgtcttagaagagcacagccctcactgctgctcaaaactttccccaatgccaaaaaccaaagctcttccctctccaccatcacaatccaaaacccacaacccaatcaaaacaaccaccccattcctccacacaaaacccacttggtttccaccagtaacgtgacccagaaactcacaccaacccaattttgtaatgagtctacacactttgatccccaccaatttcgcaatgtcattgcgtcgaacaagttgatcaccagctacattcgttccggggatttagattctgcacttaaggtgtttgagaaaatgactgttagaaccacaactagttggaattcgattttagccgggtatgcgaaaattcccgggaaagtgaaagaagcccgccaactgtttgataaaattcctcaaccagacacttgctcatataatagtatgctggcttgttatctacgtaatcttggtgttggctctgctatggagttctttgatttgatgcctgttaaggacattgcatcttggaataccatgatatcgggttttgctcagaatggggagatgagggaagcacagaagttgtttttgttgatgcctgagaagaacagtgtctcgtggtgtgcgttggtttcggggtatgtgaaatgtggggatttggactcggcggtgaagtggtttgaggttgcaccggttaagagtgttgtggcgtggacggctatggttactgggtatatgaagtttgggaagattggtgtagcagagaagttgtttagagagatgcctgagaaaaatttagtaacatggaatgctatggttgcggggtatgtggaaaactgtcaagctgaagagggtttgaagcttttcaggtcaatgattggatatggggttaggccaaatgcatcgagtttgagtagtgctctactgggttgtagcaacctgtctgcgctgcaaatgggtaggcaagtacatcagctgctctataagtttgaattatataatgatacaacttcaggaactgcattggttagtatgtattgtaagtgtgggaatttggaggatgcgtggaagtttttcattgagatgacacgaaaagatgttgttacttggaatgcaatgattgctggttatgctcaacatggggaaggtttaaaagctctcagtttgtttgaccagatgaggaatgaaggagtaaaaccagattggataacgtttgtttctgtgttaatggcttgcaatcatgcaggacttgtagatcttggggttcaatattttgattccatggcaagacagtatcaagttgaagctaagccagagcactatacatgcatggtagaccttcttggtcgtgctggtaagctagttgaagctgtagctttgatacagaaaatgccatttgaaccacattctgccatttttggaactctattaggtgcctgtcggatgcacaagaacttagaattagctgagtttgctgccgagaaattgcttgatcttgatccaacgagtgcagctggttatgttcaacttgctaatgtttatgctgcaacaaatagatgggaccttgttggcaaagtcaggcgatcgatgaaagaaaatagggtcgttctctatggctcctacgtggatatgtttgagattacatggtcacatggtacattggcatacaattattcagcacctcactccatcctgggagctttgttcttcggttcactattagaagtttag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000959 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1900864 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

577

Amino Acids

64.41

Weight (kDa)

8.62

Isoelectric Point (pI)

31.91

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0015809)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G16835
fragaria_vesca	FvH4_5g20040
malus_domestica	MD04G1050300.v1.1 MD06G1049600.v1.1
prunus_persica	Prupe.5G060100_v2.0.a1
pyrus_communis	pycom06g04210
rosa_chinensis	RchiOBHm_Chr7g0204911
rosa_laevigata	RLG00000003422
rosa_multiflora	Rmu_co8139782.1_g000001 Rmu_co8234171.1_g000001 Rmu_sc0002180.1_g000004
rosa_roxburghii	Rroxscaffold_3G00252680
rosa_rugosa	Rorug07G0086500
rosa_samantha	Rh7BG214100
rosa_wichuraiana	Rw7G018830

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1436
AccI	GTMKAC	2 cut(s)	206, 1338
AciI	CCGC	3 cut(s)	394, 671, 824
AclI	AACGTT	1 cut(s)	1214
AclWI	GGATC	2 cut(s)	212, 1496
AcsI	RAATTY	5 cut(s)	343, 369, 411, 796, 1054
AcuI	CTGAAG	2 cut(s)	870, 999
AfaI	GTAC	2 cut(s)	972, 1660
AflII	CTTAAG	1 cut(s)	299
AgeI	ACCGGT	1 cut(s)	694
AgsI	TTSAA	7 cut(s)	862, 995, 1271, 1307, 1370, 1403, 1529
AhlI	ACTAGT	1 cut(s)	335
AjnI	CCWGG	1 cut(s)	1695
Alw21I	GWGCWC	3 cut(s)	22, 925, 1323
Alw26I	GTCTC	1 cut(s)	622
AlwI	GGATC	2 cut(s)	212, 1496
AlwNI	CAGNNNCTG	1 cut(s)	1022
Ama87I	CYCGRG	1 cut(s)	374
AoxI	GGCC	1 cut(s)	896
ApeKI	GCWGC	6 cut(s)	34, 952, 979, 1478, 1514, 1547
ApoI	RAATTY	5 cut(s)	343, 369, 411, 796, 1054
AsiGI	ACCGGT	1 cut(s)	694
Asp700I	GAANNNNTTC	2 cut(s)	866, 1076
AspLEI	GCGC	1 cut(s)	952
AspS9I	GGNCC	1 cut(s)	1564
AsuC2I	CCSGG	4 cut(s)	280, 358, 375, 376
AsuHPI	GGTGA	2 cut(s)	253, 685
AvaI	CYCGRG	1 cut(s)	374
AvaII	GGWCC	1 cut(s)	1564
BanI	GGYRCC	1 cut(s)	1436
BauI	CACGAG	1 cut(s)	619
Bbv12I	GWGCWC	3 cut(s)	22, 925, 1323
BbvI	GCAGC	6 cut(s)	21, 939, 966, 1465, 1526, 1534
BccI	CCATC	3 cut(s)	92, 1554, 1700
BceAI	ACGGC	1 cut(s)	735
BciT130I	CCWGG	1 cut(s)	1697
BclI	TGATCA	1 cut(s)	258
BcnI	CCSGG	4 cut(s)	280, 358, 375, 376
BcoDI	GTCTC	1 cut(s)	622
BcuI	ACTAGT	1 cut(s)	335
BfaI	CTAG	2 cut(s)	336, 1364
BfmI	CTRYAG	1 cut(s)	1374
BfrI	CTTAAG	1 cut(s)	299
BglII	AGATCT	1 cut(s)	1258
BisI	GCNGC	6 cut(s)	35, 953, 980, 1479, 1515, 1548
BlpI	GCTNAGC	1 cut(s)	1311
BlsI	GCNGC	6 cut(s)	36, 954, 981, 1480, 1516, 1549
Bme1390I	CCNGG	5 cut(s)	280, 358, 375, 376, 1697
Bme18I	GGWCC	1 cut(s)	1564
BmeT110I	CYCGRG	1 cut(s)	374
BmgT120I	GGNCC	1 cut(s)	1564
BmiI	GGNNCC	3 cut(s)	1438, 1565, 1621
BmrFI	CCNGG	5 cut(s)	280, 358, 375, 376, 1697
BmrI	ACTGGG	2 cut(s)	741, 938
BmsI	GCATC	7 cut(s)	495, 533, 588, 774, 914, 1054, 1437
BmuI	ACTGGG	2 cut(s)	741, 938
BplI	GAGNNNNNCTC	2 cut(s)	907, 939
Bpu1102I	GCTNAGC	1 cut(s)	1311
BpuMI	CCSGG	4 cut(s)	280, 358, 375, 376
Bsa29I	ATCGAT	1 cut(s)	1589
BsaAI	YACGTR	2 cut(s)	464, 1627
BsaBI	GATNNNNATC	1 cut(s)	1500
BsaJI	CCNNGG	4 cut(s)	279, 374, 1284, 1696
BsaWI	WCCGGW	1 cut(s)	694
BsaXI	ACNNNNNCTCC	2 cut(s)	1052, 1082
Bse118I	RCCGGY	1 cut(s)	694
Bse1I	ACTGG	3 cut(s)	159, 736, 933
Bse3DI	GCAATG	4 cut(s)	240, 241, 519, 1125
Bse8I	GATNNNNATC	1 cut(s)	1500
BseBI	CCWGG	1 cut(s)	1697
BseCI	ATCGAT	1 cut(s)	1589
BseDI	CCNNGG	4 cut(s)	279, 374, 1284, 1696
BseGI	GGATG	3 cut(s)	1069, 1452, 1692
BseJI	GATNNNNATC	1 cut(s)	1500
BseMI	GCAATG	4 cut(s)	240, 241, 519, 1125
BseMII	CTCAG	5 cut(s)	569, 594, 780, 1177, 1461
BseNI	ACTGG	3 cut(s)	159, 736, 933
BseXI	GCAGC	6 cut(s)	21, 939, 966, 1465, 1526, 1534
BsgI	GTGCAG	2 cut(s)	279, 1533
Bsh1285I	CGRYCG	1 cut(s)	1589
BshFI	GGCC	1 cut(s)	898
BshNI	GGYRCC	1 cut(s)	1436
BshTI	ACCGGT	1 cut(s)	694
BshVI	ATCGAT	1 cut(s)	1589
BsiEI	CGRYCG	1 cut(s)	1589
BsiHKAI	GWGCWC	3 cut(s)	22, 925, 1323
BsiHKCI	CYCGRG	1 cut(s)	374
BsiSI	CCGG	4 cut(s)	279, 357, 375, 695
BslFI	GGGAC	1 cut(s)	1577
BsmAI	GTCTC	1 cut(s)	622
BsmFI	GGGAC	1 cut(s)	1577
BsmI	GAATGC	2 cut(s)	817, 1120
BsnI	GGCC	1 cut(s)	898
BsoBI	CYCGRG	1 cut(s)	374
Bsp1286I	GDGCHC	3 cut(s)	22, 925, 1323
Bsp143I	GATC	6 cut(s)	217, 258, 1258, 1495, 1501, 1586
Bsp1720I	GCTNAGC	1 cut(s)	1311
Bsp19I	CCATGG	1 cut(s)	1284
BspACI	CCGC	3 cut(s)	394, 671, 824
BspANI	GGCC	1 cut(s)	898
BspCNI	CTCAG	5 cut(s)	568, 595, 781, 1176, 1462
BspDI	ATCGAT	1 cut(s)	1589
BspLI	GGNNCC	3 cut(s)	1438, 1565, 1621
BspPI	GGATC	2 cut(s)	212, 1496
BspQI	GCTCTTC	2 cut(s)	10, 76
BspT107I	GGYRCC	1 cut(s)	1436
BspTI	CTTAAG	1 cut(s)	299
BsrDI	GCAATG	4 cut(s)	240, 241, 519, 1125
BsrFI	RCCGGY	1 cut(s)	694
BsrI	ACTGG	3 cut(s)	159, 736, 933
BssAI	RCCGGY	1 cut(s)	694
BssECI	CCNNGG	4 cut(s)	279, 374, 1284, 1696
BssMI	GATC	6 cut(s)	217, 258, 1258, 1495, 1501, 1586
BssSI	CACGAG	1 cut(s)	619
BssT1I	CCWWGG	1 cut(s)	1284
Bst2BI	CACGAG	1 cut(s)	619
Bst2UI	CCWGG	1 cut(s)	1697
Bst4CI	ACNGT	5 cut(s)	322, 402, 614, 842, 1296
Bst6I	CTCTTC	3 cut(s)	10, 76, 846
BstAFI	CTTAAG	1 cut(s)	299
BstAPI	GCANNNNNTGC	1 cut(s)	1124
BstBAI	YACGTR	2 cut(s)	464, 1627
BstC8I	GCNNGC	3 cut(s)	394, 450, 1237
BstDEI	CTNAG	8 cut(s)	11, 555, 603, 789, 1163, 1311, 1459, 1470
BstDSI	CCRYGG	1 cut(s)	1284
BstF5I	GGATG	3 cut(s)	1069, 1452, 1692
BstHHI	GCGC	1 cut(s)	952
BstKTI	GATC	6 cut(s)	220, 261, 1261, 1498, 1504, 1589
BstMAI	GTCTC	1 cut(s)	622
BstMBI	GATC	6 cut(s)	217, 258, 1258, 1495, 1501, 1586
BstMCI	CGRYCG	1 cut(s)	1589
BstMWI	GCNNNNNNNGC	7 cut(s)	31, 362, 719, 821, 1124, 1133, 1475
BstNI	CCWGG	1 cut(s)	1697
BstNSI	RCATGY	1 cut(s)	1332
BstSCI	CCNGG	5 cut(s)	278, 356, 373, 374, 1695
BstSFI	CTRYAG	1 cut(s)	1374
BstSNI	TACGTA	1 cut(s)	464
BstV1I	GCAGC	6 cut(s)	21, 939, 966, 1465, 1526, 1534
BstX2I	RGATCY	1 cut(s)	1258
BstYI	RGATCY	1 cut(s)	1258
Bsu15I	ATCGAT	1 cut(s)	1589
BsuRI	GGCC	1 cut(s)	898
BsuTUI	ATCGAT	1 cut(s)	1589
BtgI	CCRYGG	1 cut(s)	1284
BtsCI	GGATG	3 cut(s)	1069, 1452, 1692
BtsI	GCAGTG	1 cut(s)	29
BtsIMutI	CAGTG	2 cut(s)	29, 619
Cac8I	GCNNGC	3 cut(s)	394, 450, 1237
CaiI	CAGNNNCTG	1 cut(s)	1022
CfoI	GCGC	1 cut(s)	952
Cfr10I	RCCGGY	1 cut(s)	694
Cfr13I	GGNCC	1 cut(s)	1564
Cfr9I	CCCGGG	1 cut(s)	374
ClaI	ATCGAT	1 cut(s)	1589
CseI	GACGC	1 cut(s)	234
Csp6I	GTAC	2 cut(s)	971, 1659
CspAI	ACCGGT	1 cut(s)	694
CviAII	CATG	9 cut(s)	538, 807, 1142, 1244, 1285, 1329, 1333, 1647, 1655
CviQI	GTAC	2 cut(s)	971, 1659
DdeI	CTNAG	8 cut(s)	11, 555, 603, 789, 1163, 1311, 1459, 1470
DpnI	GATC	6 cut(s)	219, 260, 1260, 1497, 1503, 1588
DpnII	GATC	6 cut(s)	217, 258, 1258, 1495, 1501, 1586
DraI	TTTAAA	1 cut(s)	1155
Eam1104I	CTCTTC	3 cut(s)	10, 76, 846
EarI	CTCTTC	3 cut(s)	10, 76, 846
Eco105I	TACGTA	1 cut(s)	464
Eco130I	CCWWGG	1 cut(s)	1284
Eco32I	GATATC	1 cut(s)	543
Eco47I	GGWCC	1 cut(s)	1564
Eco57I	CTGAAG	2 cut(s)	870, 999
Eco88I	CYCGRG	1 cut(s)	374
EcoO109I	RGGNCCY	1 cut(s)	1564
EcoRI	GAATTC	1 cut(s)	343
EcoRII	CCWGG	1 cut(s)	1695
EcoRV	GATATC	1 cut(s)	543
EcoT14I	CCWWGG	1 cut(s)	1284
EcoT22I	ATGCAT	2 cut(s)	907, 1334
ErhI	CCWWGG	1 cut(s)	1284
FaeI	CATG	9 cut(s)	541, 810, 1145, 1247, 1288, 1332, 1336, 1650, 1658
FaqI	GGGAC	1 cut(s)	1577
FatI	CATG	9 cut(s)	537, 806, 1141, 1243, 1284, 1328, 1332, 1646, 1654
FauI	CCCGC	2 cut(s)	401, 817
FbaI	TGATCA	1 cut(s)	258
FblI	GTMKAC	2 cut(s)	206, 1338
Fnu4HI	GCNGC	6 cut(s)	35, 953, 980, 1479, 1515, 1548
FokI	GGATG	3 cut(s)	1076, 1459, 1679
Fsp4HI	GCNGC	6 cut(s)	35, 953, 980, 1479, 1515, 1548
FspBI	CTAG	2 cut(s)	336, 1364
GlaI	GCGC	1 cut(s)	951
GluI	GCNGC	6 cut(s)	35, 953, 980, 1479, 1515, 1548
HaeIII	GGCC	1 cut(s)	898
HapII	CCGG	4 cut(s)	279, 357, 375, 695
HgaI	GACGC	1 cut(s)	234
HhaI	GCGC	1 cut(s)	952
Hin1II	CATG	9 cut(s)	541, 810, 1145, 1247, 1288, 1332, 1336, 1650, 1658
Hin6I	GCGC	1 cut(s)	950
HinP1I	GCGC	1 cut(s)	950
HindIII	AAGCTT	1 cut(s)	863
HinfI	GANTC	4 cut(s)	203, 290, 665, 1280
HpaII	CCGG	4 cut(s)	279, 357, 375, 695
HphI	GGTGA	2 cut(s)	253, 685
Hpy166II	GTNNAC	4 cut(s)	207, 717, 1339, 1718
Hpy188I	TCNGA	2 cut(s)	558, 1446
Hpy188III	TCNNGA	2 cut(s)	1017, 1499
Hpy8I	GTNNAC	4 cut(s)	207, 717, 1339, 1718
Hpy99I	CGWCG	1 cut(s)	250
HpyAV	CCTTC	3 cut(s)	1142, 1184, 1352
HpyCH4III	ACNGT	5 cut(s)	322, 402, 614, 842, 1296
HpyCH4IV	ACGT	4 cut(s)	165, 463, 1214, 1626
HpyF10VI	GCNNNNNNNGC	7 cut(s)	31, 362, 719, 821, 1124, 1133, 1475
HpyF3I	CTNAG	8 cut(s)	11, 555, 603, 789, 1163, 1311, 1459, 1470
HpySE526I	ACGT	4 cut(s)	165, 463, 1214, 1626
Hsp92II	CATG	9 cut(s)	541, 810, 1145, 1247, 1288, 1332, 1336, 1650, 1658
HspAI	GCGC	1 cut(s)	950
Ksp22I	TGATCA	1 cut(s)	258
Kzo9I	GATC	6 cut(s)	217, 258, 1258, 1495, 1501, 1586
LguI	GCTCTTC	2 cut(s)	10, 76
LmnI	GCTCC	2 cut(s)	1625, 1700
Lsp1109I	GCAGC	6 cut(s)	21, 939, 966, 1465, 1526, 1534
LweI	GCATC	7 cut(s)	495, 533, 588, 774, 914, 1054, 1437
MaeI	CTAG	2 cut(s)	336, 1364
MaeII	ACGT	4 cut(s)	165, 463, 1214, 1626
MaeIII	GTNAC	6 cut(s)	161, 166, 727, 802, 1105, 1650
MalI	GATC	6 cut(s)	219, 260, 1260, 1497, 1503, 1588
MboI	GATC	6 cut(s)	217, 258, 1258, 1495, 1501, 1586
MboII	GAAGA	6 cut(s)	27, 63, 619, 763, 863, 1702
MflI	RGATCY	1 cut(s)	1258
MhlI	GDGCHC	3 cut(s)	22, 925, 1323
MlyI	GAGTC	2 cut(s)	212, 659
MmeI	TCCRAC	3 cut(s)	320, 1424, 1529
Mph1103I	ATGCAT	2 cut(s)	907, 1334
MroXI	GAANNNNTTC	2 cut(s)	866, 1076
MseI	TTAA	5 cut(s)	300, 513, 699, 1154, 1229
MslI	CAYNNNNRTG	1 cut(s)	1085
MspA1I	CMGCKG	2 cut(s)	979, 1517
MspCI	CTTAAG	1 cut(s)	299
MspI	CCGG	4 cut(s)	279, 357, 375, 695
MspR9I	CCNGG	5 cut(s)	280, 358, 375, 376, 1697
Mva1269I	GAATGC	2 cut(s)	817, 1120
MvaI	CCWGG	1 cut(s)	1697
MwoI	GCNNNNNNNGC	7 cut(s)	31, 362, 719, 821, 1124, 1133, 1475
NciI	CCSGG	4 cut(s)	280, 358, 375, 376
NcoI	CCATGG	1 cut(s)	1284
NdeII	GATC	6 cut(s)	217, 258, 1258, 1495, 1501, 1586
NlaIII	CATG	9 cut(s)	541, 810, 1145, 1247, 1288, 1332, 1336, 1650, 1658
NlaIV	GGNNCC	3 cut(s)	1438, 1565, 1621
NmeAIII	GCCGAG	2 cut(s)	647, 1507
NmuCI	GTSAC	2 cut(s)	166, 1650
NsiI	ATGCAT	2 cut(s)	907, 1334
NspI	RCATGY	1 cut(s)	1332
PciSI	GCTCTTC	2 cut(s)	10, 76
PcsI	WCGNNNNNNNCGW	1 cut(s)	626
PctI	GAATGC	2 cut(s)	817, 1120
PdmI	GAANNNNTTC	2 cut(s)	866, 1076
PfeI	GAWTC	2 cut(s)	290, 1280
PinAI	ACCGGT	1 cut(s)	694
PkrI	GCNGC	6 cut(s)	36, 954, 981, 1480, 1516, 1549
Ple19I	CGATCG	1 cut(s)	1589
PleI	GAGTC	2 cut(s)	211, 659
PpsI	GAGTC	2 cut(s)	211, 659
Ppu21I	YACGTR	2 cut(s)	464, 1627
PpuMI	RGGWCCY	1 cut(s)	1564
Psp1406I	AACGTT	1 cut(s)	1214
Psp5II	RGGWCCY	1 cut(s)	1564
Psp6I	CCWGG	1 cut(s)	1695
PspGI	CCWGG	1 cut(s)	1695
PspN4I	GGNNCC	3 cut(s)	1438, 1565, 1621
PspPI	GGNCC	1 cut(s)	1564
PspPPI	RGGWCCY	1 cut(s)	1564
PstNI	CAGNNNCTG	1 cut(s)	1022
PsuI	RGATCY	1 cut(s)	1258
PvuI	CGATCG	1 cut(s)	1589
PvuII	CAGCTG	2 cut(s)	979, 1517
RsaI	GTAC	2 cut(s)	972, 1660
RsaNI	GTAC	2 cut(s)	971, 1659
RseI	CAYNNNNRTG	1 cut(s)	1085
SapI	GCTCTTC	2 cut(s)	10, 76
SaqAI	TTAA	5 cut(s)	300, 513, 699, 1154, 1229
SatI	GCNGC	6 cut(s)	35, 953, 980, 1479, 1515, 1548
Sau3AI	GATC	6 cut(s)	217, 258, 1258, 1495, 1501, 1586
Sau96I	GGNCC	1 cut(s)	1564
SchI	GAGTC	2 cut(s)	212, 659
ScrFI	CCNGG	5 cut(s)	280, 358, 375, 376, 1697
SduI	GDGCHC	3 cut(s)	22, 925, 1323
SfaNI	GCATC	7 cut(s)	495, 533, 588, 774, 914, 1054, 1437
SfcI	CTRYAG	1 cut(s)	1374
SinI	GGWCC	1 cut(s)	1564
SmaI	CCCGGG	1 cut(s)	376
SmiMI	CAYNNNNRTG	1 cut(s)	1085
SmlI	CTYRAG	1 cut(s)	299
SmoI	CTYRAG	1 cut(s)	299
SnaBI	TACGTA	1 cut(s)	464
SpeI	ACTAGT	1 cut(s)	335
SsiI	CCGC	3 cut(s)	394, 671, 824
SspI	AATATT	1 cut(s)	1274
SspMI	CTAG	2 cut(s)	336, 1364
StyD4I	CCNGG	5 cut(s)	278, 356, 373, 374, 1695
StyI	CCWWGG	1 cut(s)	1284
TaaI	ACNGT	5 cut(s)	322, 402, 614, 842, 1296
TaiI	ACGT	4 cut(s)	168, 466, 1217, 1629
TaqI	TCGA	4 cut(s)	248, 347, 908, 1589
TatI	WGTACW	1 cut(s)	970
TfiI	GAWTC	2 cut(s)	290, 1280
Tru1I	TTAA	5 cut(s)	300, 513, 699, 1154, 1229
Tru9I	TTAA	5 cut(s)	300, 513, 699, 1154, 1229
TscAI	CASTG	2 cut(s)	36, 619
TseFI	GTSAC	2 cut(s)	166, 1650
TseI	GCWGC	6 cut(s)	34, 952, 979, 1478, 1514, 1547
Tsp45I	GTSAC	2 cut(s)	166, 1650
TspDTI	ATGAA	4 cut(s)	755, 1069, 1203, 1607
TspMI	CCCGGG	1 cut(s)	374
TspRI	CASTG	2 cut(s)	36, 619
Vha464I	CTTAAG	1 cut(s)	299
VpaK11BI	GGWCC	1 cut(s)	1564
XapI	RAATTY	5 cut(s)	343, 369, 411, 796, 1054
XceI	RCATGY	1 cut(s)	1332
XmaI	CCCGGG	1 cut(s)	374
XmiI	GTMKAC	2 cut(s)	206, 1338
XmnI	GAANNNNTTC	2 cut(s)	866, 1076
XspI	CTAG	2 cut(s)	336, 1364
Zsp2I	ATGCAT	2 cut(s)	907, 1334

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.