Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0015809

Physical Location & Seq

Genomic Coordinates Forward (+)

22591756 .. 22594801

Gene Structure 3046 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ18342

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2025 bp

ATGAGATGTCTTAGAAGAGCACAGCCCTCACTGCTGCTCAAAACTTTCCCCAATGCCAAAAACCAAAGCTCTTCCCTCTCCACCATCACAATCCAAAACCCACAACCCAATCAAAACAACCACCCCATTCCTCCACACAAAACCCACTTGGTTTCCACCAGTAACATGACCCAGAAACTCACACCAACCCAATTTTGTAATGACTCTACACACTTTGATCCCCACCAATTTCGCAATGTCATTGCGTCGAACAAGTTGATCACCAGCTACATTCGTTCCGGGGATTTAGATTCTGCACTTAAGGTGTTTGAGAAAATGACTGTTAGAACCACAACTAGTTGGAATTCGATTTTAGCCGGGTATGCGAAAATTCCCGGGAAAGTGAAAGAAGCCCGCCAACTGTTTGATAAAATTCCTCAACCAGACACTTGCTCATATAATAGTATGCTGGCTTGTTATTTACGTAATCTTGGTGTTGGCTCTGCTGTGGAGTTCTTTGATTTGATGCCTGTTAAGGACATTGCATCTTGGAATACCATGATATCGGGTTTTGCTCAGAATGGGGAGATGAGGGAAGCACAGAAGTTGTTTTTGTTGATGCCTGAGAAGAACAGTGTCTCGTGGAGTGCGTTGGTTTCGGGGTATGTGAAATGTGGGGATTTGGACTCGGCGGTGAAGTGGTTTGAGGTTGCACCGGTTAAGAGTGTTGTGGCGTGGACGGCTATGGTTACTGGGTATATGAAGTTTGGGAAGATTGGTGTAGCAGAGAAGTTGTTTAGAGAGATGCCTGAGAAAAATCTAGTAACATGGAATGCTATGGTTGCAGGGTATGTGGAAAACTGTCAAGCTGAAGAGGGTTTGAAGCTTTTCAGGTCAATGATTGGATATGGGGTTAGGCCAAATGCATCGAGTTTGAGTAGTGCTCTACTGGGTTGTAGCAACCTGTCTGCGCTGCAAATGGGTAGGCAAGTACATCAGCTTCTCTATAAGTTTGAATTATATAATGATACAACTTCAGGAACTGCATTGGTTAGTATGTATTGTAAGTGTGGGAATTTGGAGGATGCGAGGAAGTTTTTCATTGAGATGACACGAAAAGATGTTGTTACTTGGAATGCAATGATTGCTGGTTATGCTCAACATGGGGAAGGTTTAAAAGCTCTCAGTTTGTTTGACCAGATGAGGAATGAAGGAGTAAAACCAGATTGGATAACGTTTGTTTCTGTGTTAATGGCTTGCAATCATGCAGGACTTGTAGATCTTGGGGTTCAATATTTTGATTCCATGGCAAGACAGTATCAAGTTGAAGCTAAGCCAGAGCACTATACATGCATGGTAGACCTTCTTGGTCGTGCTGGTAAGCTAGTTGAAGCTGTAGCTTTGATAAAGAAAATGCCATTTGAACCACATTCTGCCATTTTTGGAACTCTATTGGGTGCCTGTCGGATGCACAAGAACTTAGAATTAGCTGAGTTTGCTGCCGAGAAATTGCTTGATCTTGATCCAACGAGTGCAGCTGGTTATGTTCAACTTGCTAATGTTTATGCTGCAACAAATAGATGGGACCTTGTTGGCAAAGTCAGGCGATCGATGAAAGAAAATAGGGTCGTGAAGACACCTGGCTATAGTTGGATTGAGATAAAGAGTGTAGTCCATGAGTTCAGATCAGGTGACAGGGCTCACCCAGAATTGGCATCTATACATGAAAAACTGTCTGAACTGGATCAGAAAATGAAGTTGGCAGGCTATGTTCCAGATCTTGAATTTGCATTACATGATGTTGGGGAAGAGCTGAAACAGCAGCTGCTATTATGGCACAGTGAAAAACTAGCAATTGCTTTTGGGCTTATACACGTGCCTTTAGGGATGCCAATTCGCATTTTCAAAAACTTGAGAGTATGTGGGGATTGCCATCATGCAGTCAAGTATATATCAGCAATTGAGAAAAGAGAAATCATTCTCAGAGATACTACAAGGTTCCATCATTTCAAAAATGGGGTTTGTTCTTGTGGTGATTACTGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000959 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1900864 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

674

Amino Acids

75.68

Weight (kDa)

8.84

Isoelectric Point (pI)

35.6

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	172 - 204	3.9e-06	PPR repeat family
PPR	PF01535	176 - 204	6.2e-08	PPR repeat
PPR_2	PF13041	235 - 266	9.7e-06	PPR repeat family
PPR	PF01535	237 - 266	8.5e-06	PPR repeat
PPR_2	PF13041	266 - 313	8e-08	PPR repeat family
PPR_2	PF13041	366 - 413	6.4e-14	PPR repeat family
PPR_3	PF13812	366 - 413	4.2e-06	Pentatricopeptide repeat domain
PPR	PF01535	369 - 399	2.7e-09	PPR repeat
E_motif	PF20431	484 - 546	3.8e-17	E motif
DYW_deaminase	PF14432	582 - 674	4.2e-43	DYW family of nucleic acid deaminases

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0015809)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G16835
fragaria_vesca	FvH4_5g20040
malus_domestica	MD04G1050300.v1.1 MD06G1049600.v1.1
prunus_persica	Prupe.5G060100_v2.0.a1
pyrus_communis	pycom06g04210
rosa_chinensis	RchiOBHm_Chr7g0204911
rosa_laevigata	RLG00000003422
rosa_multiflora	Rmu_co8139782.1_g000001 Rmu_co8234171.1_g000001 Rmu_sc0002180.1_g000004
rosa_roxburghii	Rroxscaffold_3G00252680
rosa_rugosa	Rorug07G0086500
rosa_samantha	Rh7BG214100
rosa_wichuraiana	Rw7G018830

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1436
AccI	GTMKAC	1 cut(s)	1338
AciI	CCGC	2 cut(s)	394, 671
AclI	AACGTT	1 cut(s)	1214
AclWI	GGATC	3 cut(s)	212, 1496, 1731
AcsI	RAATTY	5 cut(s)	343, 369, 411, 1054, 1763
AcuI	CTGAAG	2 cut(s)	870, 999
AcvI	CACGTG	1 cut(s)	1855
AfaI	GTAC	1 cut(s)	972
AfiI	CCNNNNNNNGG	1 cut(s)	1690
AflII	CTTAAG	1 cut(s)	299
AflIII	ACRYGT	1 cut(s)	1852
AgeI	ACCGGT	1 cut(s)	694
AhlI	ACTAGT	1 cut(s)	335
AjnI	CCWGG	1 cut(s)	1618
AjuI	GAANNNNNNNTTGG	2 cut(s)	1721, 1753
Alw21I	GWGCWC	3 cut(s)	22, 925, 1323
Alw26I	GTCTC	1 cut(s)	622
AlwI	GGATC	3 cut(s)	212, 1496, 1731
AlwNI	CAGNNNCTG	2 cut(s)	1022, 1804
Ama87I	CYCGRG	1 cut(s)	374
AoxI	GGCC	1 cut(s)	896
ApeKI	GCWGC	7 cut(s)	34, 952, 1478, 1514, 1547, 1801, 1804
ApoI	RAATTY	5 cut(s)	343, 369, 411, 1054, 1763
AsiGI	ACCGGT	1 cut(s)	694
Asp700I	GAANNNNTTC	3 cut(s)	866, 1076, 1956
AspLEI	GCGC	1 cut(s)	952
AspS9I	GGNCC	1 cut(s)	1564
AsuC2I	CCSGG	4 cut(s)	280, 358, 375, 376
AsuHPI	GGTGA	5 cut(s)	253, 685, 1673, 1682, 2024
AvaI	CYCGRG	1 cut(s)	374
AvaII	GGWCC	1 cut(s)	1564
BanI	GGYRCC	1 cut(s)	1436
BanII	GRGCYC	1 cut(s)	1681
BarI	GAAGNNNNNNTAC	2 cut(s)	963, 995
BauI	CACGAG	1 cut(s)	619
BbrPI	CACGTG	1 cut(s)	1855
BbsI	GAAGAC	1 cut(s)	1619
Bbv12I	GWGCWC	3 cut(s)	22, 925, 1323
BbvI	GCAGC	7 cut(s)	21, 939, 1465, 1526, 1534, 1791, 1813
BccI	CCATC	4 cut(s)	92, 1554, 1920, 1989
BceAI	ACGGC	1 cut(s)	735
BciT130I	CCWGG	1 cut(s)	1620
BclI	TGATCA	1 cut(s)	258
BcnI	CCSGG	4 cut(s)	280, 358, 375, 376
BcoDI	GTCTC	1 cut(s)	622
BcuI	ACTAGT	1 cut(s)	335
BfaI	CTAG	4 cut(s)	336, 800, 1364, 1829
BfmI	CTRYAG	2 cut(s)	1374, 1624
BfrI	CTTAAG	1 cut(s)	299
BglII	AGATCT	2 cut(s)	1258, 1756
BisI	GCNGC	7 cut(s)	35, 953, 1479, 1515, 1548, 1802, 1805
BlpI	GCTNAGC	1 cut(s)	1311
BlsI	GCNGC	7 cut(s)	36, 954, 1480, 1516, 1549, 1803, 1806
Bme1390I	CCNGG	5 cut(s)	280, 358, 375, 376, 1620
Bme18I	GGWCC	1 cut(s)	1564
BmeT110I	CYCGRG	1 cut(s)	374
BmgT120I	GGNCC	1 cut(s)	1564
BmiI	GGNNCC	3 cut(s)	1438, 1565, 1979
BmrFI	CCNGG	5 cut(s)	280, 358, 375, 376, 1620
BmrI	ACTGGG	2 cut(s)	741, 938
BmsI	GCATC	9 cut(s)	495, 533, 588, 774, 914, 1054, 1437, 1703, 1857
BmuI	ACTGGG	2 cut(s)	741, 938
BpiI	GAAGAC	1 cut(s)	1619
BplI	GAGNNNNNCTC	2 cut(s)	907, 939
Bpu1102I	GCTNAGC	1 cut(s)	1311
BpuEI	CTTGAG	1 cut(s)	1912
BpuMI	CCSGG	4 cut(s)	280, 358, 375, 376
Bsa29I	ATCGAT	1 cut(s)	1589
BsaAI	YACGTR	2 cut(s)	464, 1855
BsaBI	GATNNNNATC	2 cut(s)	1500, 1911
BsaJI	CCNNGG	3 cut(s)	279, 374, 1284
BsaWI	WCCGGW	1 cut(s)	694
Bsc4I	CCNNNNNNNGG	1 cut(s)	1690
Bse118I	RCCGGY	1 cut(s)	694
Bse1I	ACTGG	5 cut(s)	159, 736, 933, 1725, 2024
Bse3DI	GCAATG	4 cut(s)	240, 241, 519, 1125
Bse8I	GATNNNNATC	2 cut(s)	1500, 1911
BseBI	CCWGG	1 cut(s)	1620
BseCI	ATCGAT	1 cut(s)	1589
BseDI	CCNNGG	3 cut(s)	279, 374, 1284
BseGI	GGATG	3 cut(s)	1069, 1452, 1872
BseJI	GATNNNNATC	2 cut(s)	1500, 1911
BseLI	CCNNNNNNNGG	1 cut(s)	1690
BseMI	GCAATG	4 cut(s)	240, 241, 519, 1125
BseMII	CTCAG	6 cut(s)	569, 594, 780, 1177, 1461, 1975
BseNI	ACTGG	5 cut(s)	159, 736, 933, 1725, 2024
BseXI	GCAGC	7 cut(s)	21, 939, 1465, 1526, 1534, 1791, 1813
BsgI	GTGCAG	2 cut(s)	279, 1533
Bsh1285I	CGRYCG	1 cut(s)	1589
BshFI	GGCC	1 cut(s)	898
BshNI	GGYRCC	1 cut(s)	1436
BshTI	ACCGGT	1 cut(s)	694
BshVI	ATCGAT	1 cut(s)	1589
BsiEI	CGRYCG	1 cut(s)	1589
BsiHKAI	GWGCWC	3 cut(s)	22, 925, 1323
BsiHKCI	CYCGRG	1 cut(s)	374
BsiSI	CCGG	4 cut(s)	279, 357, 375, 695
BslFI	GGGAC	1 cut(s)	1577
BslI	CCNNNNNNNGG	1 cut(s)	1690
BsmAI	GTCTC	1 cut(s)	622
BsmFI	GGGAC	1 cut(s)	1577
BsmI	GAATGC	2 cut(s)	817, 1120
BsnI	GGCC	1 cut(s)	898
BsoBI	CYCGRG	1 cut(s)	374
Bsp1286I	GDGCHC	4 cut(s)	22, 925, 1323, 1681
Bsp143I	GATC	9 cut(s)	217, 258, 1258, 1495, 1501, 1586, 1664, 1723, 1756
Bsp1720I	GCTNAGC	1 cut(s)	1311
Bsp19I	CCATGG	1 cut(s)	1284
BspACI	CCGC	2 cut(s)	394, 671
BspANI	GGCC	1 cut(s)	898
BspCNI	CTCAG	6 cut(s)	568, 595, 781, 1176, 1462, 1974
BspDI	ATCGAT	1 cut(s)	1589
BspLI	GGNNCC	3 cut(s)	1438, 1565, 1979
BspPI	GGATC	3 cut(s)	212, 1496, 1731
BspQI	GCTCTTC	3 cut(s)	10, 76, 1782
BspT107I	GGYRCC	1 cut(s)	1436
BspTI	CTTAAG	1 cut(s)	299
BsrDI	GCAATG	4 cut(s)	240, 241, 519, 1125
BsrFI	RCCGGY	1 cut(s)	694
BsrI	ACTGG	5 cut(s)	159, 736, 933, 1725, 2024
BssAI	RCCGGY	1 cut(s)	694
BssECI	CCNNGG	3 cut(s)	279, 374, 1284
BssMI	GATC	9 cut(s)	217, 258, 1258, 1495, 1501, 1586, 1664, 1723, 1756
BssSI	CACGAG	1 cut(s)	619
BssT1I	CCWWGG	1 cut(s)	1284
Bst2BI	CACGAG	1 cut(s)	619
Bst2UI	CCWGG	1 cut(s)	1620
Bst4CI	ACNGT	7 cut(s)	322, 402, 614, 842, 1296, 1713, 1820
Bst6I	CTCTTC	4 cut(s)	10, 76, 846, 1782
BstAFI	CTTAAG	1 cut(s)	299
BstAPI	GCANNNNNTGC	1 cut(s)	1124
BstBAI	YACGTR	2 cut(s)	464, 1855
BstC8I	GCNNGC	4 cut(s)	394, 450, 1237, 1744
BstDEI	CTNAG	9 cut(s)	11, 555, 603, 789, 1163, 1311, 1459, 1470, 1961
BstDSI	CCRYGG	1 cut(s)	1284
BstF5I	GGATG	3 cut(s)	1069, 1452, 1872
BstHHI	GCGC	1 cut(s)	952
BstKTI	GATC	9 cut(s)	220, 261, 1261, 1498, 1504, 1589, 1667, 1726, 1759
BstMAI	GTCTC	1 cut(s)	622
BstMBI	GATC	9 cut(s)	217, 258, 1258, 1495, 1501, 1586, 1664, 1723, 1756
BstMCI	CGRYCG	1 cut(s)	1589
BstMWI	GCNNNNNNNGC	9 cut(s)	31, 362, 719, 821, 1124, 1133, 1475, 1798, 1813
BstNI	CCWGG	1 cut(s)	1620
BstNSI	RCATGY	1 cut(s)	1332
BstSCI	CCNGG	5 cut(s)	278, 356, 373, 374, 1618
BstSFI	CTRYAG	2 cut(s)	1374, 1624
BstSNI	TACGTA	1 cut(s)	464
BstV1I	GCAGC	7 cut(s)	21, 939, 1465, 1526, 1534, 1791, 1813
BstV2I	GAAGAC	1 cut(s)	1619
BstX2I	RGATCY	2 cut(s)	1258, 1756
BstYI	RGATCY	2 cut(s)	1258, 1756
Bsu15I	ATCGAT	1 cut(s)	1589
BsuRI	GGCC	1 cut(s)	898
BsuTUI	ATCGAT	1 cut(s)	1589
BtgI	CCRYGG	1 cut(s)	1284
BtsCI	GGATG	3 cut(s)	1069, 1452, 1872
BtsI	GCAGTG	1 cut(s)	29
BtsIMutI	CAGTG	3 cut(s)	29, 619, 1825
Cac8I	GCNNGC	4 cut(s)	394, 450, 1237, 1744
CaiI	CAGNNNCTG	2 cut(s)	1022, 1804
CfoI	GCGC	1 cut(s)	952
Cfr10I	RCCGGY	1 cut(s)	694
Cfr13I	GGNCC	1 cut(s)	1564
Cfr9I	CCCGGG	1 cut(s)	374
ClaI	ATCGAT	1 cut(s)	1589
CseI	GACGC	1 cut(s)	234
Csp6I	GTAC	1 cut(s)	971
CspAI	ACCGGT	1 cut(s)	694
CviQI	GTAC	1 cut(s)	971
DdeI	CTNAG	9 cut(s)	11, 555, 603, 789, 1163, 1311, 1459, 1470, 1961
DpnI	GATC	9 cut(s)	219, 260, 1260, 1497, 1503, 1588, 1666, 1725, 1758
DpnII	GATC	9 cut(s)	217, 258, 1258, 1495, 1501, 1586, 1664, 1723, 1756
DraI	TTTAAA	1 cut(s)	1155
Eam1104I	CTCTTC	4 cut(s)	10, 76, 846, 1782
EarI	CTCTTC	4 cut(s)	10, 76, 846, 1782
Eco105I	TACGTA	1 cut(s)	464
Eco130I	CCWWGG	1 cut(s)	1284
Eco24I	GRGCYC	1 cut(s)	1681
Eco32I	GATATC	1 cut(s)	543
Eco47I	GGWCC	1 cut(s)	1564
Eco57I	CTGAAG	2 cut(s)	870, 999
Eco72I	CACGTG	1 cut(s)	1855
Eco88I	CYCGRG	1 cut(s)	374
EcoO109I	RGGNCCY	1 cut(s)	1564
EcoRI	GAATTC	1 cut(s)	343
EcoRII	CCWGG	1 cut(s)	1618
EcoRV	GATATC	1 cut(s)	543
EcoT14I	CCWWGG	1 cut(s)	1284
EcoT22I	ATGCAT	2 cut(s)	907, 1334
EcoT38I	GRGCYC	1 cut(s)	1681
ErhI	CCWWGG	1 cut(s)	1284
FaqI	GGGAC	1 cut(s)	1577
FauI	CCCGC	1 cut(s)	401
FbaI	TGATCA	1 cut(s)	258
FblI	GTMKAC	1 cut(s)	1338
Fnu4HI	GCNGC	7 cut(s)	35, 953, 1479, 1515, 1548, 1802, 1805
FokI	GGATG	3 cut(s)	1076, 1459, 1879
FriOI	GRGCYC	1 cut(s)	1681
Fsp4HI	GCNGC	7 cut(s)	35, 953, 1479, 1515, 1548, 1802, 1805
FspBI	CTAG	4 cut(s)	336, 800, 1364, 1829
GlaI	GCGC	1 cut(s)	951
GluI	GCNGC	7 cut(s)	35, 953, 1479, 1515, 1548, 1802, 1805
HaeIII	GGCC	1 cut(s)	898
HapII	CCGG	4 cut(s)	279, 357, 375, 695
HgaI	GACGC	1 cut(s)	234
HhaI	GCGC	1 cut(s)	952
Hin6I	GCGC	1 cut(s)	950
HinP1I	GCGC	1 cut(s)	950
HindIII	AAGCTT	1 cut(s)	863
HinfI	GANTC	4 cut(s)	203, 290, 665, 1280
HpaII	CCGG	4 cut(s)	279, 357, 375, 695
HphI	GGTGA	5 cut(s)	253, 685, 1673, 1682, 2024
Hpy166II	GTNNAC	2 cut(s)	717, 1339
Hpy188I	TCNGA	6 cut(s)	558, 1446, 1664, 1717, 1728, 1964
Hpy188III	TCNNGA	5 cut(s)	1017, 1499, 1609, 1754, 1760
Hpy8I	GTNNAC	2 cut(s)	717, 1339
Hpy99I	CGWCG	1 cut(s)	250
HpyAV	CCTTC	3 cut(s)	1142, 1184, 1352
HpyCH4III	ACNGT	7 cut(s)	322, 402, 614, 842, 1296, 1713, 1820
HpyCH4IV	ACGT	3 cut(s)	463, 1214, 1854
HpyF10VI	GCNNNNNNNGC	9 cut(s)	31, 362, 719, 821, 1124, 1133, 1475, 1798, 1813
HpyF3I	CTNAG	9 cut(s)	11, 555, 603, 789, 1163, 1311, 1459, 1470, 1961
HpySE526I	ACGT	3 cut(s)	463, 1214, 1854
HspAI	GCGC	1 cut(s)	950
Ksp22I	TGATCA	1 cut(s)	258
Kzo9I	GATC	9 cut(s)	217, 258, 1258, 1495, 1501, 1586, 1664, 1723, 1756
LguI	GCTCTTC	3 cut(s)	10, 76, 1782
Lsp1109I	GCAGC	7 cut(s)	21, 939, 1465, 1526, 1534, 1791, 1813
LweI	GCATC	9 cut(s)	495, 533, 588, 774, 914, 1054, 1437, 1703, 1857
MaeI	CTAG	4 cut(s)	336, 800, 1364, 1829
MaeII	ACGT	3 cut(s)	463, 1214, 1854
MaeIII	GTNAC	5 cut(s)	161, 727, 802, 1105, 1670
MalI	GATC	9 cut(s)	219, 260, 1260, 1497, 1503, 1588, 1666, 1725, 1758
MboI	GATC	9 cut(s)	217, 258, 1258, 1495, 1501, 1586, 1664, 1723, 1756
MboII	GAAGA	7 cut(s)	27, 63, 619, 763, 863, 1624, 1799
MfeI	CAATTG	2 cut(s)	1833, 1938
MflI	RGATCY	2 cut(s)	1258, 1756
MhlI	GDGCHC	4 cut(s)	22, 925, 1323, 1681
MlyI	GAGTC	2 cut(s)	197, 659
MmeI	TCCRAC	4 cut(s)	320, 1424, 1529, 1610
Mph1103I	ATGCAT	2 cut(s)	907, 1334
MroXI	GAANNNNTTC	3 cut(s)	866, 1076, 1956
MseI	TTAA	5 cut(s)	300, 513, 699, 1154, 1229
MslI	CAYNNNNRTG	1 cut(s)	1085
MspA1I	CMGCKG	2 cut(s)	1517, 1804
MspCI	CTTAAG	1 cut(s)	299
MspI	CCGG	4 cut(s)	279, 357, 375, 695
MspR9I	CCNGG	5 cut(s)	280, 358, 375, 376, 1620
MunI	CAATTG	2 cut(s)	1833, 1938
Mva1269I	GAATGC	2 cut(s)	817, 1120
MvaI	CCWGG	1 cut(s)	1620
MwoI	GCNNNNNNNGC	9 cut(s)	31, 362, 719, 821, 1124, 1133, 1475, 1798, 1813
NciI	CCSGG	4 cut(s)	280, 358, 375, 376
NcoI	CCATGG	1 cut(s)	1284
NdeII	GATC	9 cut(s)	217, 258, 1258, 1495, 1501, 1586, 1664, 1723, 1756
NlaIV	GGNNCC	3 cut(s)	1438, 1565, 1979
NmeAIII	GCCGAG	2 cut(s)	647, 1507
NmuCI	GTSAC	1 cut(s)	1670
NsiI	ATGCAT	2 cut(s)	907, 1334
NspI	RCATGY	1 cut(s)	1332
PciSI	GCTCTTC	3 cut(s)	10, 76, 1782
PcsI	WCGNNNNNNNCGW	1 cut(s)	626
PctI	GAATGC	2 cut(s)	817, 1120
PdmI	GAANNNNTTC	3 cut(s)	866, 1076, 1956
PfeI	GAWTC	2 cut(s)	290, 1280
PinAI	ACCGGT	1 cut(s)	694
PkrI	GCNGC	7 cut(s)	36, 954, 1480, 1516, 1549, 1803, 1806
Ple19I	CGATCG	1 cut(s)	1589
PleI	GAGTC	2 cut(s)	197, 659
PmaCI	CACGTG	1 cut(s)	1855
PmlI	CACGTG	1 cut(s)	1855
PpsI	GAGTC	2 cut(s)	197, 659
Ppu21I	YACGTR	2 cut(s)	464, 1855
PpuMI	RGGWCCY	1 cut(s)	1564
Psp1406I	AACGTT	1 cut(s)	1214
Psp5II	RGGWCCY	1 cut(s)	1564
Psp6I	CCWGG	1 cut(s)	1618
PspCI	CACGTG	1 cut(s)	1855
PspGI	CCWGG	1 cut(s)	1618
PspN4I	GGNNCC	3 cut(s)	1438, 1565, 1979
PspPI	GGNCC	1 cut(s)	1564
PspPPI	RGGWCCY	1 cut(s)	1564
PstNI	CAGNNNCTG	2 cut(s)	1022, 1804
PsuI	RGATCY	2 cut(s)	1258, 1756
PvuI	CGATCG	1 cut(s)	1589
PvuII	CAGCTG	2 cut(s)	1517, 1804
RsaI	GTAC	1 cut(s)	972
RsaNI	GTAC	1 cut(s)	971
RseI	CAYNNNNRTG	1 cut(s)	1085
SapI	GCTCTTC	3 cut(s)	10, 76, 1782
SaqAI	TTAA	5 cut(s)	300, 513, 699, 1154, 1229
SatI	GCNGC	7 cut(s)	35, 953, 1479, 1515, 1548, 1802, 1805
Sau3AI	GATC	9 cut(s)	217, 258, 1258, 1495, 1501, 1586, 1664, 1723, 1756
Sau96I	GGNCC	1 cut(s)	1564
SchI	GAGTC	2 cut(s)	197, 659
ScrFI	CCNGG	5 cut(s)	280, 358, 375, 376, 1620
SduI	GDGCHC	4 cut(s)	22, 925, 1323, 1681
SfaNI	GCATC	9 cut(s)	495, 533, 588, 774, 914, 1054, 1437, 1703, 1857
SfcI	CTRYAG	2 cut(s)	1374, 1624
SinI	GGWCC	1 cut(s)	1564
SmaI	CCCGGG	1 cut(s)	376
SmiMI	CAYNNNNRTG	1 cut(s)	1085
SmlI	CTYRAG	2 cut(s)	299, 1891
SmoI	CTYRAG	2 cut(s)	299, 1891
SnaBI	TACGTA	1 cut(s)	464
SpeI	ACTAGT	1 cut(s)	335
SsiI	CCGC	2 cut(s)	394, 671
SspI	AATATT	1 cut(s)	1274
SspMI	CTAG	4 cut(s)	336, 800, 1364, 1829
StyD4I	CCNGG	5 cut(s)	278, 356, 373, 374, 1618
StyI	CCWWGG	1 cut(s)	1284
TaaI	ACNGT	7 cut(s)	322, 402, 614, 842, 1296, 1713, 1820
TaiI	ACGT	3 cut(s)	466, 1217, 1857
TaqI	TCGA	4 cut(s)	248, 347, 908, 1589
TatI	WGTACW	1 cut(s)	970
TfiI	GAWTC	2 cut(s)	290, 1280
Tru1I	TTAA	5 cut(s)	300, 513, 699, 1154, 1229
Tru9I	TTAA	5 cut(s)	300, 513, 699, 1154, 1229
TscAI	CASTG	3 cut(s)	36, 619, 1825
TseFI	GTSAC	1 cut(s)	1670
TseI	GCWGC	7 cut(s)	34, 952, 1478, 1514, 1547, 1801, 1804
Tsp45I	GTSAC	1 cut(s)	1670
TspDTI	ATGAA	6 cut(s)	755, 1069, 1203, 1607, 1719, 1748
TspMI	CCCGGG	1 cut(s)	374
TspRI	CASTG	3 cut(s)	36, 619, 1825
Vha464I	CTTAAG	1 cut(s)	299
VpaK11BI	GGWCC	1 cut(s)	1564
XapI	RAATTY	5 cut(s)	343, 369, 411, 1054, 1763
XceI	RCATGY	1 cut(s)	1332
XmaI	CCCGGG	1 cut(s)	374
XmiI	GTMKAC	1 cut(s)	1338
XmnI	GAANNNNTTC	3 cut(s)	866, 1076, 1956
XspI	CTAG	4 cut(s)	336, 800, 1364, 1829
Zsp2I	ATGCAT	2 cut(s)	907, 1334

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.