Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr06

Orthogroup ID

OG0015809

Physical Location & Seq

Genomic Coordinates Reverse (-)

6752877 .. 6754904

Gene Structure 2028 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD06G1049600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2028 bp

ATGGCAAATCTTAGAAACACAAAAGCACAACCGTGGTTGGTGTCCAAAATTTTCCCACCAACCAAACACCAAACCTCCCCCCTCTCCACCTTCACAATCCAAAACCCTCATTCCAATCCCAACAAAGAAGCTCTTCCCGCCAACTTCCCTTCCCGCCCACCACAACAAACCCACTTGGTGTCGACCAGTTACAGTTTCTGCAATCAATCTACACCGTTTGATCAACCTGAGTTTGGTGATGTCATTAGGTCAAACAAGATGATTACCAGCTACGTTCGAGCTGGGGATTTAGATTCTGCTCTTGGGGTGTTTGAGAAGATGACGTTTAGGACGACAGTTACTTGGAATTCGATTTTATCCGGGTACGCGAAAACGCCCGGGAAAATGAAAGAAGCCTGTGAGGTGTTTGAGAAATGTCCTGAACCAGACTCTTGTTCGTATAATATTATGTTGGGTTGTCATTTGCACAATTTGGATGTTGATGCTGCTTTGAAATTCTTTCATAAGATGCCGGTTAAGGACACGGCATCTTGGAATACTATGATATCGGGTTTTGCTGAAAACGGGAAGATGAGGGAAGCTCATGAGTTGTTTTCGGTGATGCCAGAGAAGAACAGTGTCTCATGGAGTGCAATGATTTCGGGGTATGTCAAATGTGGGGATTTGGACATGGCTGTGGAGTTGTTTGAGGTGGCAGCGGTTAAGAGTGTTGTGGCGTGGACTGCTATGGTTACAGGGTATATGAAGTTTGGGAAGATTGAATTGGCCGAGAAATTGTTTAGAGATATGCCAGTAAAAAATTTAGTATCTTGGAATGCTATAATATCGGGTTATGTTGAAAATTGTCGAGCTGAAGAGGGTTTGAAAGTTTTTAGGTCAATGATCGGAGATGGGGTTTGGCCAAACCCGTCTAGTTTGAGTAGTGTTCTACTGGGTTGCAGTAACCTATCAGCATTGAAGATGGGTAAGCAAGTGCATCAACTGGTCTACAAATTTCAGTTATATAATGATACAACTACAGTAACCTCTTTGGTTAGCATGTATTGTAAGTGTGGTAATTTGGAGGATGCTCGGAAATTGTTCACTGACATGGAACGAAAGGACGTTGTTACTTGGAATGCAATGGTTGCTGGTTATGCTCAGCACGGAGCAGGTCTTAAAGCACTCCAGTTGTTTGATCAGATGAGGAATGAGGGAACAGAGCCAGATTGGATAACGTTTGTTGCTGTGTTAATGGCTTGCAACCATGCAGGACTAGTAGATCTTGGGGTTCGGTATTTTGATTCGATGGCAAGGGATTACGGAGTTGAAGCAAAGCCAGACCACTATACGTGTATGGTAGACCTTCTTGGTCGAGCTGGTAGGCTAGTTGAAGCTGTGGATCTGATTAAGAAAATGCCATTTGAACCACATTCCGCCATTTTTGGAACTCTTTTGGGTGCTTGTCGGATCCACAAGAACTTGGAGCTAGCTGAGTTTGCTGCCAAGAAATTGCTCGATCTTGATCCAGCGAGTGCAGCTGGATATGTTCAACTTGCTAATGTTTATGCTGCAACAAACAGATGGGACCATGTTGCGAAGGTCAGGCGATCGATGAAAGAAAATGGGGTAGTGAAGACACCTGGGTATAGTTGGATTGAGGTGCAGAGTGTAGTGCATGAGTTCAGATCAAGTGATCGGGCACACCCAGAGTTGCCATCTATACATGAAAAACTGTTTGAGCTCGACCGCAAAATGAAGTTGGCAGGCTATGTTCCAGATCTTGAATTTGCATTACATGACGTTGGGGAAGAGCAGAAACAGCAGCTTCTGTTATGGCACAGCGAAAAACTAGCAATTGCATTCGGGCTTATAAAAGTGCCGTTAGGAAGCCCGATTCGCATCTTCAAAAACTTGAGAGTATGCGGGGATTGCCATCGTGCCACCAAGTACATATCAGCAATTGAAGAAAGGGAAATAATAGTTAGAGATACCACAAGGTTTCATCATTTCAGAAATGGGGTTTGTTCTTGTGGAGATTACTGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000959 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1900864 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

676

Amino Acids

75.78

Weight (kDa)

7.82

Isoelectric Point (pI)

42.67

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	174 - 205	2.9e-07	PPR repeat family
PPR	PF01535	177 - 205	1e-07	PPR repeat
PPR	PF01535	207 - 230	1.6e-06	PPR repeat
PPR_2	PF13041	236 - 267	5.1e-06	PPR repeat family
PPR	PF01535	238 - 267	9.2e-06	PPR repeat
PPR_2	PF13041	267 - 314	5e-07	PPR repeat family
PPR	PF01535	269 - 299	5.2e-06	PPR repeat
PPR_1	PF12854	337 - 365	3.5e-06	PPR repeat
PPR	PF01535	340 - 368	2e-06	PPR repeat
PPR_2	PF13041	367 - 414	8e-12	PPR repeat family
PPR	PF01535	370 - 399	5.1e-07	PPR repeat
E_motif	PF20431	485 - 547	3.4e-19	E motif
DYW_deaminase	PF14432	583 - 675	6.5e-44	DYW family of nucleic acid deaminases

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0015809)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G16835
fragaria_vesca	FvH4_5g20040
malus_domestica	MD04G1050300.v1.1 MD06G1049600.v1.1
prunus_persica	Prupe.5G060100_v2.0.a1
pyrus_communis	pycom06g04210
rosa_chinensis	RchiOBHm_Chr7g0204911
rosa_laevigata	RLG00000003422
rosa_multiflora	Rmu_co8139782.1_g000001 Rmu_co8234171.1_g000001 Rmu_sc0002180.1_g000004
rosa_roxburghii	Rroxscaffold_3G00252680
rosa_rugosa	Rorug07G0086500
rosa_samantha	Rh7BG214100
rosa_wichuraiana	Rw7G018830

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1853
Acc36I	ACCTGC	1 cut(s)	1142
AccI	GTMKAC	3 cut(s)	182, 987, 1341
AccII	CGCG	1 cut(s)	368
AciI	CCGC	6 cut(s)	138, 154, 698, 1416, 1729, 1905
AclI	AACGTT	1 cut(s)	1217
AclWI	GGATC	4 cut(s)	1389, 1444, 1457, 1499
AcoI	YGGCCR	2 cut(s)	765, 899
AcsI	RAATTY	6 cut(s)	48, 346, 494, 799, 992, 1766
AcuI	CTGAAG	1 cut(s)	873
AdeI	CACNNNGTG	1 cut(s)	178
AfaI	GTAC	2 cut(s)	365, 1931
AfiI	CCNNNNNNNGG	1 cut(s)	233
AflIII	ACRYGT	1 cut(s)	1331
AhlI	ACTAGT	1 cut(s)	1255
AjnI	CCWGG	1 cut(s)	1621
AjuI	GAANNNNNNNTTGG	2 cut(s)	746, 778
AleI	CACNNNNGTG	1 cut(s)	31
Alw21I	GWGCWC	1 cut(s)	1725
Alw26I	GTCTC	1 cut(s)	625
AlwI	GGATC	4 cut(s)	1389, 1444, 1457, 1499
AlwNI	CAGNNNCTG	2 cut(s)	198, 1810
Ama87I	CYCGRG	1 cut(s)	377
AoxI	GGCC	2 cut(s)	765, 899
ApeKI	GCWGC	6 cut(s)	485, 695, 1481, 1517, 1550, 1804
ApoI	RAATTY	6 cut(s)	48, 346, 494, 799, 992, 1766
Asp700I	GAANNNNTTC	2 cut(s)	132, 1079
AspS9I	GGNCC	1 cut(s)	1567
AsuC2I	CCSGG	3 cut(s)	361, 378, 379
AsuHPI	GGTGA	2 cut(s)	248, 610
AsuNHI	GCTAGC	1 cut(s)	1468
AvaI	CYCGRG	1 cut(s)	377
AvaII	GGWCC	1 cut(s)	1567
BaeGI	GKGCMC	1 cut(s)	1684
BalI	TGGCCA	1 cut(s)	901
BamHI	GGATCC	1 cut(s)	1449
BanII	GRGCYC	1 cut(s)	1725
BbsI	GAAGAC	1 cut(s)	1622
Bbv12I	GWGCWC	1 cut(s)	1725
BbvI	GCAGC	6 cut(s)	472, 707, 1468, 1529, 1537, 1816
BccI	CCATC	6 cut(s)	884, 955, 1282, 1557, 1705, 1923
BceAI	ACGGC	2 cut(s)	540, 1846
BcgI	CGANNNNNNTGC	2 cut(s)	621, 655
BciT130I	CCWGG	1 cut(s)	1623
BclI	TGATCA	2 cut(s)	220, 1177
BcnI	CCSGG	3 cut(s)	361, 378, 379
BcoDI	GTCTC	1 cut(s)	625
BcuI	ACTAGT	1 cut(s)	1255
BfaI	CTAG	5 cut(s)	912, 1256, 1367, 1469, 1832
BfmI	CTRYAG	1 cut(s)	1017
BfuAI	ACCTGC	1 cut(s)	1142
BglII	AGATCT	2 cut(s)	1261, 1759
BisI	GCNGC	6 cut(s)	486, 696, 1482, 1518, 1551, 1805
BlpI	GCTNAGC	1 cut(s)	1140
BlsI	GCNGC	6 cut(s)	487, 697, 1483, 1519, 1552, 1806
Bme1390I	CCNGG	4 cut(s)	361, 378, 379, 1623
Bme18I	GGWCC	1 cut(s)	1567
BmeT110I	CYCGRG	1 cut(s)	377
BmgT120I	GGNCC	1 cut(s)	1567
BmiI	GGNNCC	2 cut(s)	1451, 1568
BmrFI	CCNGG	4 cut(s)	361, 378, 379, 1623
BmrI	ACTGGG	1 cut(s)	941
BmsI	GCATC	7 cut(s)	472, 498, 536, 591, 985, 1057, 1890
BmtI	GCTAGC	1 cut(s)	1472
BmuI	ACTGGG	1 cut(s)	941
BpiI	GAAGAC	1 cut(s)	1622
BplI	GAGNNNNNCTC	2 cut(s)	565, 597
BpmI	CTGGAG	1 cut(s)	1151
Bpu1102I	GCTNAGC	1 cut(s)	1140
BpuEI	CTTGAG	1 cut(s)	1915
BpuMI	CCSGG	3 cut(s)	361, 378, 379
Bsa29I	ATCGAT	1 cut(s)	1592
BsaAI	YACGTR	1 cut(s)	1332
BsaBI	GATNNNNATC	3 cut(s)	1503, 1880, 1914
BsaJI	CCNNGG	3 cut(s)	32, 377, 1622
BsaXI	ACNNNNNCTCC	4 cut(s)	59, 89, 879, 909
Bsc4I	CCNNNNNNNGG	1 cut(s)	233
Bse118I	RCCGGY	1 cut(s)	511
Bse1I	ACTGG	6 cut(s)	186, 791, 936, 987, 1168, 2027
Bse3DI	GCAATG	2 cut(s)	639, 1128
Bse8I	GATNNNNATC	3 cut(s)	1503, 1880, 1914
BseBI	CCWGG	1 cut(s)	1623
BseCI	ATCGAT	1 cut(s)	1592
BseDI	CCNNGG	3 cut(s)	32, 377, 1622
BseGI	GGATG	2 cut(s)	481, 1072
BseJI	GATNNNNATC	3 cut(s)	1503, 1880, 1914
BseLI	CCNNNNNNNGG	1 cut(s)	233
BseMI	GCAATG	2 cut(s)	639, 1128
BseMII	CTCAG	3 cut(s)	219, 1154, 1464
BseNI	ACTGG	6 cut(s)	186, 791, 936, 987, 1168, 2027
BseSI	GKGCMC	1 cut(s)	1684
BseXI	GCAGC	6 cut(s)	472, 707, 1468, 1529, 1537, 1816
BseYI	CCCAGC	1 cut(s)	281
BsgI	GTGCAG	2 cut(s)	1536, 1664
Bsh1236I	CGCG	1 cut(s)	368
Bsh1285I	CGRYCG	2 cut(s)	1592, 1729
BshFI	GGCC	2 cut(s)	767, 901
BshVI	ATCGAT	1 cut(s)	1592
BsiEI	CGRYCG	2 cut(s)	1592, 1729
BsiHKAI	GWGCWC	1 cut(s)	1725
BsiHKCI	CYCGRG	1 cut(s)	377
BsiSI	CCGG	3 cut(s)	360, 378, 512
BslFI	GGGAC	1 cut(s)	1580
BslI	CCNNNNNNNGG	1 cut(s)	233
BsmAI	GTCTC	1 cut(s)	625
BsmFI	GGGAC	1 cut(s)	1580
BsmI	GAATGC	3 cut(s)	820, 1123, 1841
BsnI	GGCC	2 cut(s)	767, 901
BsoBI	CYCGRG	1 cut(s)	377
Bsp1286I	GDGCHC	2 cut(s)	1684, 1725
Bsp1720I	GCTNAGC	1 cut(s)	1140
BspACI	CCGC	6 cut(s)	138, 154, 698, 1416, 1729, 1905
BspANI	GGCC	2 cut(s)	767, 901
BspCNI	CTCAG	3 cut(s)	220, 1153, 1465
BspDI	ATCGAT	1 cut(s)	1592
BspFNI	CGCG	1 cut(s)	368
BspHI	TCATGA	1 cut(s)	583
BspLI	GGNNCC	2 cut(s)	1451, 1568
BspMI	ACCTGC	1 cut(s)	1142
BspOI	GCTAGC	1 cut(s)	1472
BspPI	GGATC	4 cut(s)	1389, 1444, 1457, 1499
BspQI	GCTCTTC	2 cut(s)	138, 1785
BsrDI	GCAATG	2 cut(s)	639, 1128
BsrFI	RCCGGY	1 cut(s)	511
BsrI	ACTGG	6 cut(s)	186, 791, 936, 987, 1168, 2027
BssAI	RCCGGY	1 cut(s)	511
BssECI	CCNNGG	3 cut(s)	32, 377, 1622
Bst2UI	CCWGG	1 cut(s)	1623
Bst4CI	ACNGT	7 cut(s)	33, 194, 216, 337, 617, 1021, 1716
Bst6I	CTCTTC	3 cut(s)	138, 849, 1785
BstAPI	GCANNNNNTGC	1 cut(s)	1127
BstBAI	YACGTR	1 cut(s)	1332
BstC8I	GCNNGC	3 cut(s)	1240, 1470, 1747
BstDEI	CTNAG	4 cut(s)	11, 228, 1140, 1473
BstDSI	CCRYGG	1 cut(s)	32
BstF5I	GGATG	2 cut(s)	481, 1072
BstFNI	CGCG	1 cut(s)	368
BstMAI	GTCTC	1 cut(s)	625
BstMCI	CGRYCG	2 cut(s)	1592, 1729
BstMWI	GCNNNNNNNGC	9 cut(s)	137, 722, 1127, 1136, 1478, 1517, 1801, 1878, 1911
BstNI	CCWGG	1 cut(s)	1623
BstNSI	RCATGY	1 cut(s)	1042
BstSCI	CCNGG	4 cut(s)	359, 376, 377, 1621
BstSFI	CTRYAG	1 cut(s)	1017
BstSLI	GKGCMC	1 cut(s)	1684
BstUI	CGCG	1 cut(s)	368
BstV1I	GCAGC	6 cut(s)	472, 707, 1468, 1529, 1537, 1816
BstV2I	GAAGAC	1 cut(s)	1622
BstX2I	RGATCY	4 cut(s)	1261, 1381, 1449, 1759
BstYI	RGATCY	4 cut(s)	1261, 1381, 1449, 1759
Bsu15I	ATCGAT	1 cut(s)	1592
BsuRI	GGCC	2 cut(s)	767, 901
BsuTUI	ATCGAT	1 cut(s)	1592
BtgI	CCRYGG	1 cut(s)	32
BtsCI	GGATG	2 cut(s)	481, 1072
BtsIMutI	CAGTG	2 cut(s)	622, 1083
BveI	ACCTGC	1 cut(s)	1142
Cac8I	GCNNGC	3 cut(s)	1240, 1470, 1747
CaiI	CAGNNNCTG	2 cut(s)	198, 1810
CciI	TCATGA	1 cut(s)	583
Cfr10I	RCCGGY	1 cut(s)	511
Cfr13I	GGNCC	1 cut(s)	1567
Cfr9I	CCCGGG	1 cut(s)	377
ClaI	ATCGAT	1 cut(s)	1592
Csp6I	GTAC	2 cut(s)	364, 1930
CviQI	GTAC	2 cut(s)	364, 1930
DdeI	CTNAG	4 cut(s)	11, 228, 1140, 1473
DraIII	CACNNNGTG	1 cut(s)	178
EaeI	YGGCCR	2 cut(s)	765, 899
Eam1104I	CTCTTC	3 cut(s)	138, 849, 1785
EarI	CTCTTC	3 cut(s)	138, 849, 1785
EciI	GGCGGA	1 cut(s)	1405
Ecl136II	GAGCTC	1 cut(s)	1723
Eco24I	GRGCYC	1 cut(s)	1725
Eco32I	GATATC	1 cut(s)	546
Eco47I	GGWCC	1 cut(s)	1567
Eco53kI	GAGCTC	1 cut(s)	1723
Eco57I	CTGAAG	1 cut(s)	873
Eco88I	CYCGRG	1 cut(s)	377
EcoICRI	GAGCTC	1 cut(s)	1723
EcoRI	GAATTC	1 cut(s)	346
EcoRII	CCWGG	1 cut(s)	1621
EcoRV	GATATC	1 cut(s)	546
EcoT38I	GRGCYC	1 cut(s)	1725
FalI	AAGNNNNNCTT	2 cut(s)	117, 149
FaqI	GGGAC	1 cut(s)	1580
FauI	CCCGC	3 cut(s)	145, 161, 1898
FbaI	TGATCA	2 cut(s)	220, 1177
FblI	GTMKAC	3 cut(s)	182, 987, 1341
Fnu4HI	GCNGC	6 cut(s)	486, 696, 1482, 1518, 1551, 1805
FokI	GGATG	2 cut(s)	488, 1079
FriOI	GRGCYC	1 cut(s)	1725
Fsp4HI	GCNGC	6 cut(s)	486, 696, 1482, 1518, 1551, 1805
FspBI	CTAG	5 cut(s)	912, 1256, 1367, 1469, 1832
GluI	GCNGC	6 cut(s)	486, 696, 1482, 1518, 1551, 1805
GsaI	CCCAGC	1 cut(s)	285
GsuI	CTGGAG	1 cut(s)	1151
HaeIII	GGCC	2 cut(s)	767, 901
HapII	CCGG	3 cut(s)	360, 378, 512
HincII	GTYRAC	1 cut(s)	183
HindII	GTYRAC	1 cut(s)	183
HinfI	GANTC	4 cut(s)	293, 428, 1283, 1876
HpaII	CCGG	3 cut(s)	360, 378, 512
HphI	GGTGA	2 cut(s)	248, 610
Hpy166II	GTNNAC	5 cut(s)	183, 720, 988, 1083, 1342
Hpy188I	TCNGA	7 cut(s)	887, 1074, 1182, 1386, 1449, 1667, 1994
Hpy188III	TCNNGA	5 cut(s)	419, 584, 1502, 1757, 1763
Hpy8I	GTNNAC	5 cut(s)	183, 720, 988, 1083, 1342
HpyAV	CCTTC	4 cut(s)	100, 159, 1355, 1573
HpyCH4III	ACNGT	7 cut(s)	33, 194, 216, 337, 617, 1021, 1716
HpyCH4IV	ACGT	6 cut(s)	273, 323, 1104, 1217, 1331, 1782
HpyF10VI	GCNNNNNNNGC	9 cut(s)	137, 722, 1127, 1136, 1478, 1517, 1801, 1878, 1911
HpyF3I	CTNAG	4 cut(s)	11, 228, 1140, 1473
HpySE526I	ACGT	6 cut(s)	273, 323, 1104, 1217, 1331, 1782
Ksp22I	TGATCA	2 cut(s)	220, 1177
LguI	GCTCTTC	2 cut(s)	138, 1785
LmnI	GCTCC	2 cut(s)	1148, 1465
Lsp1109I	GCAGC	6 cut(s)	472, 707, 1468, 1529, 1537, 1816
LweI	GCATC	7 cut(s)	472, 498, 536, 591, 985, 1057, 1890
MaeI	CTAG	5 cut(s)	912, 1256, 1367, 1469, 1832
MaeII	ACGT	6 cut(s)	273, 323, 1104, 1217, 1331, 1782
MaeIII	GTNAC	6 cut(s)	188, 337, 730, 941, 1021, 1108
MfeI	CAATTG	2 cut(s)	1836, 1941
MflI	RGATCY	4 cut(s)	1261, 1381, 1449, 1759
MhlI	GDGCHC	2 cut(s)	1684, 1725
MlsI	TGGCCA	1 cut(s)	901
MluNI	TGGCCA	1 cut(s)	901
MlyI	GAGTC	1 cut(s)	422
MmeI	TCCRAC	2 cut(s)	1427, 1613
Mox20I	TGGCCA	1 cut(s)	901
MroXI	GAANNNNTTC	2 cut(s)	132, 1079
MscI	TGGCCA	1 cut(s)	901
MseI	TTAA	5 cut(s)	516, 702, 1158, 1232, 1389
MslI	CAYNNNNRTG	3 cut(s)	31, 674, 1088
Msp20I	TGGCCA	1 cut(s)	901
MspA1I	CMGCKG	2 cut(s)	698, 1520
MspI	CCGG	3 cut(s)	360, 378, 512
MspR9I	CCNGG	4 cut(s)	361, 378, 379, 1623
MunI	CAATTG	2 cut(s)	1836, 1941
Mva1269I	GAATGC	3 cut(s)	820, 1123, 1841
MvaI	CCWGG	1 cut(s)	1623
MvnI	CGCG	1 cut(s)	368
MwoI	GCNNNNNNNGC	9 cut(s)	137, 722, 1127, 1136, 1478, 1517, 1801, 1878, 1911
NciI	CCSGG	3 cut(s)	361, 378, 379
NheI	GCTAGC	1 cut(s)	1468
NlaIV	GGNNCC	2 cut(s)	1451, 1568
NmeAIII	GCCGAG	1 cut(s)	793
NspI	RCATGY	1 cut(s)	1042
OliI	CACNNNNGTG	1 cut(s)	31
PagI	TCATGA	1 cut(s)	583
PciSI	GCTCTTC	2 cut(s)	138, 1785
PcsI	WCGNNNNNNNCGW	1 cut(s)	329
PctI	GAATGC	3 cut(s)	820, 1123, 1841
PdmI	GAANNNNTTC	2 cut(s)	132, 1079
PfeI	GAWTC	3 cut(s)	293, 1283, 1876
PkrI	GCNGC	6 cut(s)	487, 697, 1483, 1519, 1552, 1806
Ple19I	CGATCG	1 cut(s)	1592
PleI	GAGTC	1 cut(s)	422
PpsI	GAGTC	1 cut(s)	422
Ppu21I	YACGTR	1 cut(s)	1332
PsiI	TTATAA	1 cut(s)	1853
Psp124BI	GAGCTC	1 cut(s)	1725
Psp1406I	AACGTT	1 cut(s)	1217
Psp6I	CCWGG	1 cut(s)	1621
PspFI	CCCAGC	1 cut(s)	281
PspGI	CCWGG	1 cut(s)	1621
PspN4I	GGNNCC	2 cut(s)	1451, 1568
PspPI	GGNCC	1 cut(s)	1567
PstNI	CAGNNNCTG	2 cut(s)	198, 1810
PsuI	RGATCY	4 cut(s)	1261, 1381, 1449, 1759
PvuI	CGATCG	1 cut(s)	1592
PvuII	CAGCTG	1 cut(s)	1520
RsaI	GTAC	2 cut(s)	365, 1931
RsaNI	GTAC	2 cut(s)	364, 1930
RseI	CAYNNNNRTG	3 cut(s)	31, 674, 1088
SacI	GAGCTC	1 cut(s)	1725
SalI	GTCGAC	1 cut(s)	181
SapI	GCTCTTC	2 cut(s)	138, 1785
SaqAI	TTAA	5 cut(s)	516, 702, 1158, 1232, 1389
SatI	GCNGC	6 cut(s)	486, 696, 1482, 1518, 1551, 1805
Sau96I	GGNCC	1 cut(s)	1567
SchI	GAGTC	1 cut(s)	422
ScrFI	CCNGG	4 cut(s)	361, 378, 379, 1623
SduI	GDGCHC	2 cut(s)	1684, 1725
SfaNI	GCATC	7 cut(s)	472, 498, 536, 591, 985, 1057, 1890
SfcI	CTRYAG	1 cut(s)	1017
SinI	GGWCC	1 cut(s)	1567
SmaI	CCCGGG	1 cut(s)	379
SmiMI	CAYNNNNRTG	3 cut(s)	31, 674, 1088
SmlI	CTYRAG	1 cut(s)	1894
SmoI	CTYRAG	1 cut(s)	1894
SpeI	ACTAGT	1 cut(s)	1255
SsiI	CCGC	6 cut(s)	138, 154, 698, 1416, 1729, 1905
SspI	AATATT	1 cut(s)	445
SspMI	CTAG	5 cut(s)	912, 1256, 1367, 1469, 1832
SstI	GAGCTC	1 cut(s)	1725
StyD4I	CCNGG	4 cut(s)	359, 376, 377, 1621
TaaI	ACNGT	7 cut(s)	33, 194, 216, 337, 617, 1021, 1716
TaiI	ACGT	6 cut(s)	276, 326, 1107, 1220, 1334, 1785
TaqI	TCGA	9 cut(s)	182, 277, 350, 847, 1286, 1354, 1497, 1592, 1725
TatI	WGTACW	1 cut(s)	1929
TfiI	GAWTC	3 cut(s)	293, 1283, 1876
Tru1I	TTAA	5 cut(s)	516, 702, 1158, 1232, 1389
Tru9I	TTAA	5 cut(s)	516, 702, 1158, 1232, 1389
TscAI	CASTG	2 cut(s)	622, 1090
TseI	GCWGC	6 cut(s)	485, 695, 1481, 1517, 1550, 1804
TspDTI	ATGAA	7 cut(s)	401, 491, 758, 1610, 1722, 1751, 1973
TspGWI	ACGGA	2 cut(s)	1161, 1317
TspMI	CCCGGG	1 cut(s)	377
TspRI	CASTG	2 cut(s)	622, 1090
VpaK11BI	GGWCC	1 cut(s)	1567
XapI	RAATTY	6 cut(s)	48, 346, 494, 799, 992, 1766
XceI	RCATGY	1 cut(s)	1042
XmaI	CCCGGG	1 cut(s)	377
XmiI	GTMKAC	3 cut(s)	182, 987, 1341
XmnI	GAANNNNTTC	2 cut(s)	132, 1079
XspI	CTAG	5 cut(s)	912, 1256, 1367, 1469, 1832

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.