Prupe.5G060100_v2.0.a1

Pentatricopeptide repeat-containing protein At4g16835

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
Physical Location & Seq
Reverse (-)
6472202 .. 6474664
2463 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G060100.1

Sequence Viewer

Length: 2049 bp
ATGACAAATCTTAGAAATACAAGAAAACCACCAACATTGGTGCTTAAAATTTTCCCCCATTCCACACACCAAAACTCTGCCCTCTCCTCCTTCACAATCCAAACCCCATATGCCAATCAAAACAGAGAAACCGTCCCCGTCAACTTTCCCTCTCTCCCACAACAAGAAACCCACTTGGTTTCCACCAGTAACATGGCATTGAAGAGCACACCCACTCAATTTTGCAATGAATCTAAACCGTTTGATCGTGAATTTGGCAATATCATTAAGTCAAATAAGTTGATCACAAGTTATATTCGAGCCGGGGATTTAGATTCTGCTCGTAGGGTGTTTGAAAAGATGACAGTTAGGACAACAGTTACTTGGAATTCAATTTTATCCGGGTATGCGAAAATGCCTGGGAAGATGAAAGAAGCGTGCGAGGTGTTTGAGAAATGTCCTGAACCAGACTCTTGTTCATATAATATTATGTTGGCTTGTTATTTACACAATTTTGATGTTGATGCTGCTTTGGAATTCTTTCGCAAGATGCCTGTCAAGGACACGGCTTCTTGGAATACTATGTTATCAGTGTTTGCTCAAAATGGGAAGATGAGAGAAGCACATGAGTTGTTTTTGGTGATGCCAGAGAAGAATAGTGTCTCATGGAGTGCAATGATTTCGGGTTATGTGAAATGTGGGGATTTGGACATGGCCGTGGAGTTGTTTGAGGTGGCACCAGTTAAGAGTGTCGTGGCATGGACTGCTATGGTTACAGGGTACATGAAGTTTGGGAAGATTGAATTAGCCGAGAAATTATTCAGAGAGACGCCTATGAAAAATTTAGTAACTTGGAATACTATGATTTCTGGTTATGTTGAAAATTGTCAAGCTGAAGAGGGTTTAAAGCTTTTTAGGTCAATGATCGGATATGGGGTTAGACCGAACCCGTCAAGTTTGTGTAGTGTTCTACTGGGTTGCAGTAACCTCTCTGCATTGCAGATGGGTAGGCAGGTACATCAGCTGATTTATAAATTTCAATTATATAAGGATACAACTGCAGCGACCTGTTTGGTTAGCATGTATTGTAAGTGTGGGAATTTGGGGGATGCTTGGAAGTTGTTTATTGAGATGGCACGAAAAGACGTTGTTACTTGGAATGCTATGATTGCTGGTTATGCTCAACATGGAGCAGGTCTCAAAGCTCTCAATTTGTTTGACCGGATGAGGAAGGAGGGAGCAAAGCCAGATTGGATCACATTTGTGGCAGTCTTAATGGCCTGCAACCATGCAGGGTTGGTAGATCTTGGAGTACGGTATTTTGATTCAATGGCAAGGGATTATGGAGTTGCAGCAAAGCCGGACCACTATACGTGTATGGTAGACCTTCTTGGTCGAGCTGGTAGGCTAGTTGAAGCTGCGAATTTGATAAAGGAAATGCCGTTCGAACCACATTCTGCCATATTTGGAACTCTTTTGGGTGCCTGCCGGATCCACAAGAACCTAGAGCTAGCTGAGTTTGCTGCCAAGAAATTGCTTGATCTTGATCCAACGAGTGCAGCTGGTTATGTTCAACTTGCTAATGTTTATGCAGCAACCAACAGATGGGACCATGTTGCGAAGGTAAGGCGATCGATGAAAAAAAATGGGGTAGTGAAGACACCAGGGTACAGTTGGATTGAGGTGAAGAGTGTGGTGCATGAATTCAGATCAGGTGACAGGGCTCACCTAGAATTGGCATCTATACATGAAAAACTGTTTGAACTGGATCAAAAAATGAAGTTGGCAGGCTACGTTCCAGATCTTAATTTTGCCTTACATGATGTTGGAGAAGAGCAGAAACAGCAGCTTCTGTTATGGCACAGTGAAAAACTAGCAATTGCTTTCGGGCTTATAAAAATGCCGTTAGGGACCCCGATTCGCATTTTCAAAAACTTGAGAGTTTGTGGGGATTGCCATCATGCTACCAAGTACATATCAGCTATTGAGAAAAGGGAAATCATTGTTAGAGATACTACAAGGTTCCATCATTTCAAAGGTGGGGTTTGTTCTTGTGGAGATTACTGGTGA

Protein Analysis

683

Amino Acids

76.79

Weight (kDa)

8.91

Isoelectric Point (pI)

36.26

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0015809)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G16835
fragaria_vesca FvH4_5g20040
malus_domestica MD04G1050300.v1.1 MD06G1049600.v1.1
prunus_persica Prupe.5G060100_v2.0.a1
pyrus_communis pycom06g04210
rosa_chinensis RchiOBHm_Chr7g0204911
rosa_laevigata RLG00000003422
rosa_multiflora Rmu_co8139782.1_g000001 Rmu_co8234171.1_g000001 Rmu_sc0002180.1_g000004
rosa_roxburghii Rroxscaffold_3G00252680
rosa_rugosa Rorug07G0086500
rosa_samantha Rh7BG214100
rosa_wichuraiana Rw7G018830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1011, 1874
Acc36I ACCTGC 2 cut(s) 982, 1163
AccB1I GGYRCC 2 cut(s) 715, 1460
AccB7I CCANNNNNTGG 1 cut(s) 1584
AccI GTMKAC 1 cut(s) 1362
AclWI GGATC 5 cut(s) 1241, 1465, 1478, 1520, 1755
AcoI YGGCCR 1 cut(s) 693
AcsI RAATTY 9 cut(s) 48, 251, 367, 515, 820, 1013, 1078, 1402, 1682
AcuI CTGAAG 1 cut(s) 894
AcyI GRCGYC 1 cut(s) 809
AfaI GTAC 5 cut(s) 761, 996, 1293, 1649, 1952
AfiI CCNNNNNNNGG 2 cut(s) 1584, 1714
AflIII ACRYGT 1 cut(s) 1352
AjnI CCWGG 2 cut(s) 397, 1642
AleI CACNNNNGTG 1 cut(s) 1241
AloI GAACNNNNNNTCC 2 cut(s) 1406, 1438
Alw21I GWGCWC 1 cut(s) 209
Alw26I GTCTC 3 cut(s) 646, 800, 1181
AlwI GGATC 5 cut(s) 1241, 1465, 1478, 1520, 1755
AlwNI CAGNNNCTG 1 cut(s) 1831
AoxI GGCC 2 cut(s) 693, 1257
ApeKI GCWGC 8 cut(s) 506, 1040, 1331, 1397, 1502, 1538, 1571, 1825
ApoI RAATTY 9 cut(s) 48, 251, 367, 515, 820, 1013, 1078, 1402, 1682
Asp700I GAANNNNTTC 2 cut(s) 519, 797
AspS9I GGNCC 3 cut(s) 1342, 1588, 1890
AsuC2I CCSGG 2 cut(s) 304, 382
AsuHPI GGTGA 4 cut(s) 631, 1675, 1697, 1706
AsuII TTCGAA 1 cut(s) 1425
AsuNHI GCTAGC 1 cut(s) 1489
AvaII GGWCC 3 cut(s) 1342, 1588, 1890
BamHI GGATCC 1 cut(s) 1470
BanI GGYRCC 2 cut(s) 715, 1460
BanII GRGCYC 1 cut(s) 1705
BbsI GAAGAC 1 cut(s) 1643
Bbv12I GWGCWC 1 cut(s) 209
BbvI GCAGC 8 cut(s) 493, 1052, 1343, 1384, 1489, 1550, 1583, 1837
BccI CCATC 5 cut(s) 976, 1105, 1578, 1944, 2013
BceAI ACGGC 4 cut(s) 561, 680, 1405, 1867
BcgI CGANNNNNNTGC 2 cut(s) 642, 676
BciT130I CCWGG 2 cut(s) 399, 1644
BciVI GTATCC 1 cut(s) 1024
BclI TGATCA 1 cut(s) 282
BcnI CCSGG 2 cut(s) 304, 382
BcoDI GTCTC 3 cut(s) 646, 800, 1181
BfaI CTAG 5 cut(s) 1388, 1484, 1490, 1709, 1853
BfmI CTRYAG 1 cut(s) 1038
BfuAI ACCTGC 2 cut(s) 982, 1163
BfuI GTATCC 1 cut(s) 1024
BglII AGATCT 2 cut(s) 1282, 1780
BisI GCNGC 8 cut(s) 507, 1041, 1332, 1398, 1503, 1539, 1572, 1826
BlsI GCNGC 8 cut(s) 508, 1042, 1333, 1399, 1504, 1540, 1573, 1827
Bme1390I CCNGG 4 cut(s) 304, 382, 399, 1644
Bme18I GGWCC 3 cut(s) 1342, 1588, 1890
BmgT120I GGNCC 3 cut(s) 1342, 1588, 1890
BmiI GGNNCC 7 cut(s) 717, 1462, 1472, 1589, 1891, 1892, 2003
BmrFI CCNGG 4 cut(s) 304, 382, 399, 1644
BmrI ACTGGG 1 cut(s) 962
BmsI GCATC 5 cut(s) 493, 519, 612, 1078, 1727
BmtI GCTAGC 1 cut(s) 1493
BmuI ACTGGG 1 cut(s) 962
BpiI GAAGAC 1 cut(s) 1643
BplI GAGNNNNNCTC 2 cut(s) 1161, 1193
Bpu14I TTCGAA 1 cut(s) 1425
BpuEI CTTGAG 1 cut(s) 1936
BpuMI CCSGG 2 cut(s) 304, 382
Bsa29I ATCGAT 1 cut(s) 1613
BsaAI YACGTR 1 cut(s) 1353
BsaBI GATNNNNATC 2 cut(s) 1524, 1935
BsaHI GRCGYC 1 cut(s) 809
BsaI GGTCTC 1 cut(s) 1181
BsaJI CCNNGG 4 cut(s) 303, 398, 696, 1643
BsaWI WCCGGW 1 cut(s) 1200
Bsc4I CCNNNNNNNGG 2 cut(s) 1584, 1714
Bse1I ACTGG 5 cut(s) 186, 719, 957, 1749, 2048
Bse3DI GCAATG 3 cut(s) 232, 660, 974
Bse8I GATNNNNATC 2 cut(s) 1524, 1935
BseBI CCWGG 2 cut(s) 399, 1644
BseCI ATCGAT 1 cut(s) 1613
BseDI CCNNGG 4 cut(s) 303, 398, 696, 1643
BseGI GGATG 2 cut(s) 1093, 1209
BseJI GATNNNNATC 2 cut(s) 1524, 1935
BseLI CCNNNNNNNGG 2 cut(s) 1584, 1714
BseMI GCAATG 3 cut(s) 232, 660, 974
BseMII CTCAG 1 cut(s) 1485
BseNI ACTGG 5 cut(s) 186, 719, 957, 1749, 2048
BseRI GAGGAG 1 cut(s) 76
BseXI GCAGC 8 cut(s) 493, 1052, 1343, 1384, 1489, 1550, 1583, 1837
BsgI GTGCAG 1 cut(s) 1557
Bsh1285I CGRYCG 1 cut(s) 1613
BshFI GGCC 2 cut(s) 695, 1259
BshNI GGYRCC 2 cut(s) 715, 1460
BshVI ATCGAT 1 cut(s) 1613
BsiEI CGRYCG 1 cut(s) 1613
BsiHKAI GWGCWC 1 cut(s) 209
BsiSI CCGG 5 cut(s) 303, 381, 1201, 1340, 1468
BslFI GGGAC 3 cut(s) 119, 1601, 1903
BslI CCNNNNNNNGG 2 cut(s) 1584, 1714
BsmAI GTCTC 3 cut(s) 646, 800, 1181
BsmBI CGTCTC 1 cut(s) 800
BsmFI GGGAC 3 cut(s) 119, 1601, 1903
BsmI GAATGC 1 cut(s) 1144
BsnI GGCC 2 cut(s) 695, 1259
Bso31I GGTCTC 1 cut(s) 1181
Bsp119I TTCGAA 1 cut(s) 1425
Bsp1286I GDGCHC 2 cut(s) 209, 1705
BspANI GGCC 2 cut(s) 695, 1259
BspCNI CTCAG 1 cut(s) 1486
BspDI ATCGAT 1 cut(s) 1613
BspLI GGNNCC 7 cut(s) 717, 1462, 1472, 1589, 1891, 1892, 2003
BspMAI CTGCAG 1 cut(s) 1042
BspMI ACCTGC 2 cut(s) 982, 1163
BspOI GCTAGC 1 cut(s) 1493
BspPI GGATC 5 cut(s) 1241, 1465, 1478, 1520, 1755
BspQI GCTCTTC 2 cut(s) 197, 1806
BspT104I TTCGAA 1 cut(s) 1425
BspT107I GGYRCC 2 cut(s) 715, 1460
BspTNI GGTCTC 1 cut(s) 1181
BsrDI GCAATG 3 cut(s) 232, 660, 974
BsrI ACTGG 5 cut(s) 186, 719, 957, 1749, 2048
BssECI CCNNGG 4 cut(s) 303, 398, 696, 1643
BssNI GRCGYC 1 cut(s) 809
Bst2UI CCWGG 2 cut(s) 399, 1644
Bst4CI ACNGT 8 cut(s) 133, 240, 346, 358, 1296, 1652, 1737, 1844
Bst6I CTCTTC 4 cut(s) 197, 870, 1661, 1806
BstACI GRCGYC 1 cut(s) 809
BstAPI GCANNNNNTGC 1 cut(s) 743
BstBAI YACGTR 1 cut(s) 1353
BstBI TTCGAA 1 cut(s) 1425
BstC8I GCNNGC 5 cut(s) 418, 1261, 1465, 1491, 1768
BstDEI CTNAG 2 cut(s) 11, 1494
BstDSI CCRYGG 1 cut(s) 696
BstF5I GGATG 2 cut(s) 1093, 1209
BstMAI GTCTC 3 cut(s) 646, 800, 1181
BstMCI CGRYCG 1 cut(s) 1613
BstMWI GCNNNNNNNGC 5 cut(s) 743, 1148, 1157, 1499, 1822
BstNI CCWGG 2 cut(s) 399, 1644
BstNSI RCATGY 1 cut(s) 1063
BstSCI CCNGG 4 cut(s) 302, 380, 397, 1642
BstSFI CTRYAG 1 cut(s) 1038
BstV1I GCAGC 8 cut(s) 493, 1052, 1343, 1384, 1489, 1550, 1583, 1837
BstV2I GAAGAC 1 cut(s) 1643
BstX2I RGATCY 3 cut(s) 1282, 1470, 1780
BstXI CCANNNNNNTGG 1 cut(s) 193
BstYI RGATCY 3 cut(s) 1282, 1470, 1780
Bsu15I ATCGAT 1 cut(s) 1613
BsuI GTATCC 1 cut(s) 1024
BsuRI GGCC 2 cut(s) 695, 1259
BsuTUI ATCGAT 1 cut(s) 1613
BtgI CCRYGG 1 cut(s) 696
BtsCI GGATG 2 cut(s) 1093, 1209
BtsIMutI CAGTG 2 cut(s) 576, 1849
BveI ACCTGC 2 cut(s) 982, 1163
Cac8I GCNNGC 5 cut(s) 418, 1261, 1465, 1491, 1768
CaiI CAGNNNCTG 1 cut(s) 1831
Cfr13I GGNCC 3 cut(s) 1342, 1588, 1890
ClaI ATCGAT 1 cut(s) 1613
CseI GACGC 1 cut(s) 817
Csp6I GTAC 5 cut(s) 760, 995, 1292, 1648, 1951
CspCI CAANNNNNGTGG 2 cut(s) 18, 53
CviQI GTAC 5 cut(s) 760, 995, 1292, 1648, 1951
DdeI CTNAG 2 cut(s) 11, 1494
DraI TTTAAA 1 cut(s) 885
EaeI YGGCCR 1 cut(s) 693
Eam1104I CTCTTC 4 cut(s) 197, 870, 1661, 1806
EarI CTCTTC 4 cut(s) 197, 870, 1661, 1806
Eco24I GRGCYC 1 cut(s) 1705
Eco31I GGTCTC 1 cut(s) 1181
Eco47I GGWCC 3 cut(s) 1342, 1588, 1890
Eco57I CTGAAG 1 cut(s) 894
EcoO109I RGGNCCY 1 cut(s) 1890
EcoRI GAATTC 3 cut(s) 367, 515, 1682
EcoRII CCWGG 2 cut(s) 397, 1642
EcoT38I GRGCYC 1 cut(s) 1705
Esp3I CGTCTC 1 cut(s) 800
FaqI GGGAC 3 cut(s) 119, 1601, 1903
FauNDI CATATG 1 cut(s) 109
FbaI TGATCA 1 cut(s) 282
FblI GTMKAC 1 cut(s) 1362
Fnu4HI GCNGC 8 cut(s) 507, 1041, 1332, 1398, 1503, 1539, 1572, 1826
FokI GGATG 2 cut(s) 1100, 1216
FriOI GRGCYC 1 cut(s) 1705
Fsp4HI GCNGC 8 cut(s) 507, 1041, 1332, 1398, 1503, 1539, 1572, 1826
FspBI CTAG 5 cut(s) 1388, 1484, 1490, 1709, 1853
GluI GCNGC 8 cut(s) 507, 1041, 1332, 1398, 1503, 1539, 1572, 1826
HaeIII GGCC 2 cut(s) 695, 1259
HapII CCGG 5 cut(s) 303, 381, 1201, 1340, 1468
HgaI GACGC 1 cut(s) 817
Hin1I GRCGYC 1 cut(s) 809
HincII GTYRAC 1 cut(s) 142
HindII GTYRAC 1 cut(s) 142
HindIII AAGCTT 1 cut(s) 887
HinfI GANTC 5 cut(s) 230, 314, 449, 1304, 1897
HpaII CCGG 5 cut(s) 303, 381, 1201, 1340, 1468
HphI GGTGA 4 cut(s) 631, 1675, 1697, 1706
Hpy166II GTNNAC 2 cut(s) 142, 1363
Hpy188I TCNGA 3 cut(s) 803, 908, 1688
Hpy188III TCNNGA 4 cut(s) 248, 440, 1523, 1778
Hpy8I GTNNAC 2 cut(s) 142, 1363
HpyAV CCTTC 4 cut(s) 100, 1204, 1376, 1594
HpyCH4III ACNGT 8 cut(s) 133, 240, 346, 358, 1296, 1652, 1737, 1844
HpyCH4IV ACGT 3 cut(s) 1125, 1352, 1773
HpyF10VI GCNNNNNNNGC 5 cut(s) 743, 1148, 1157, 1499, 1822
HpyF3I CTNAG 2 cut(s) 11, 1494
HpySE526I ACGT 3 cut(s) 1125, 1352, 1773
Hsp92I GRCGYC 1 cut(s) 809
KflI GGGWCCC 1 cut(s) 1890
Ksp22I TGATCA 1 cut(s) 282
LguI GCTCTTC 2 cut(s) 197, 1806
LmnI GCTCC 2 cut(s) 1169, 1217
Lsp1109I GCAGC 8 cut(s) 493, 1052, 1343, 1384, 1489, 1550, 1583, 1837
LweI GCATC 5 cut(s) 493, 519, 612, 1078, 1727
MaeI CTAG 5 cut(s) 1388, 1484, 1490, 1709, 1853
MaeII ACGT 3 cut(s) 1125, 1352, 1773
MaeIII GTNAC 7 cut(s) 188, 358, 751, 826, 962, 1129, 1694
MboII GAAGA 9 cut(s) 214, 415, 601, 643, 787, 887, 1648, 1678, 1823
MfeI CAATTG 1 cut(s) 1857
MflI RGATCY 3 cut(s) 1282, 1470, 1780
MhlI GDGCHC 2 cut(s) 209, 1705
MlyI GAGTC 1 cut(s) 443
MmeI TCCRAC 3 cut(s) 1553, 1634, 1786
MroXI GAANNNNTTC 2 cut(s) 519, 797
MseI TTAA 6 cut(s) 45, 267, 723, 884, 1253, 1785
MslI CAYNNNNRTG 2 cut(s) 695, 1241
MspA1I CMGCKG 2 cut(s) 1003, 1541
MspI CCGG 5 cut(s) 303, 381, 1201, 1340, 1468
MspR9I CCNGG 4 cut(s) 304, 382, 399, 1644
MunI CAATTG 1 cut(s) 1857
Mva1269I GAATGC 1 cut(s) 1144
MvaI CCWGG 2 cut(s) 399, 1644
MwoI GCNNNNNNNGC 5 cut(s) 743, 1148, 1157, 1499, 1822
NciI CCSGG 2 cut(s) 304, 382
NdeI CATATG 1 cut(s) 109
NheI GCTAGC 1 cut(s) 1489
NlaIV GGNNCC 7 cut(s) 717, 1462, 1472, 1589, 1891, 1892, 2003
NmeAIII GCCGAG 1 cut(s) 814
NmuCI GTSAC 1 cut(s) 1694
NspI RCATGY 1 cut(s) 1063
NspV TTCGAA 1 cut(s) 1425
OliI CACNNNNGTG 1 cut(s) 1241
PciSI GCTCTTC 2 cut(s) 197, 1806
PctI GAATGC 1 cut(s) 1144
PdmI GAANNNNTTC 2 cut(s) 519, 797
PfeI GAWTC 4 cut(s) 230, 314, 1304, 1897
PflMI CCANNNNNTGG 1 cut(s) 1584
PkrI GCNGC 8 cut(s) 508, 1042, 1333, 1399, 1504, 1540, 1573, 1827
Ple19I CGATCG 1 cut(s) 1613
PleI GAGTC 1 cut(s) 443
PpsI GAGTC 1 cut(s) 443
Ppu21I YACGTR 1 cut(s) 1353
PpuMI RGGWCCY 1 cut(s) 1890
PsiI TTATAA 2 cut(s) 1011, 1874
Psp5II RGGWCCY 1 cut(s) 1890
Psp6I CCWGG 2 cut(s) 397, 1642
PspGI CCWGG 2 cut(s) 397, 1642
PspN4I GGNNCC 7 cut(s) 717, 1462, 1472, 1589, 1891, 1892, 2003
PspPI GGNCC 3 cut(s) 1342, 1588, 1890
PspPPI RGGWCCY 1 cut(s) 1890
PstI CTGCAG 1 cut(s) 1042
PstNI CAGNNNCTG 1 cut(s) 1831
PsuI RGATCY 3 cut(s) 1282, 1470, 1780
PvuI CGATCG 1 cut(s) 1613
PvuII CAGCTG 2 cut(s) 1003, 1541
RsaI GTAC 5 cut(s) 761, 996, 1293, 1649, 1952
RsaNI GTAC 5 cut(s) 760, 995, 1292, 1648, 1951
RseI CAYNNNNRTG 2 cut(s) 695, 1241
SapI GCTCTTC 2 cut(s) 197, 1806
SaqAI TTAA 6 cut(s) 45, 267, 723, 884, 1253, 1785
SatI GCNGC 8 cut(s) 507, 1041, 1332, 1398, 1503, 1539, 1572, 1826
Sau96I GGNCC 3 cut(s) 1342, 1588, 1890
SchI GAGTC 1 cut(s) 443
ScrFI CCNGG 4 cut(s) 304, 382, 399, 1644
SduI GDGCHC 2 cut(s) 209, 1705
SfaNI GCATC 5 cut(s) 493, 519, 612, 1078, 1727
SfcI CTRYAG 1 cut(s) 1038
SfuI TTCGAA 1 cut(s) 1425
SinI GGWCC 3 cut(s) 1342, 1588, 1890
SmiMI CAYNNNNRTG 2 cut(s) 695, 1241
SmlI CTYRAG 1 cut(s) 1915
SmoI CTYRAG 1 cut(s) 1915
SspI AATATT 1 cut(s) 466
SspMI CTAG 5 cut(s) 1388, 1484, 1490, 1709, 1853
StyD4I CCNGG 4 cut(s) 302, 380, 397, 1642
TaaI ACNGT 8 cut(s) 133, 240, 346, 358, 1296, 1652, 1737, 1844
TaiI ACGT 3 cut(s) 1128, 1355, 1776
TaqI TCGA 4 cut(s) 298, 1375, 1425, 1613
TaqII GACCGA 1 cut(s) 937
TatI WGTACW 1 cut(s) 1950
TfiI GAWTC 4 cut(s) 230, 314, 1304, 1897
Tru1I TTAA 6 cut(s) 45, 267, 723, 884, 1253, 1785
Tru9I TTAA 6 cut(s) 45, 267, 723, 884, 1253, 1785
TscAI CASTG 2 cut(s) 576, 1849
TseFI GTSAC 1 cut(s) 1694
TseI GCWGC 8 cut(s) 506, 1040, 1331, 1397, 1502, 1538, 1571, 1825
Tsp45I GTSAC 1 cut(s) 1694
TspDTI ATGAA 9 cut(s) 243, 422, 447, 779, 830, 1631, 1695, 1743, 1772
TspRI CASTG 2 cut(s) 576, 1849
Van91I CCANNNNNTGG 1 cut(s) 1584
VpaK11BI GGWCC 3 cut(s) 1342, 1588, 1890
XapI RAATTY 9 cut(s) 48, 251, 367, 515, 820, 1013, 1078, 1402, 1682
XceI RCATGY 1 cut(s) 1063
XcmI CCANNNNNNNNNTGG 2 cut(s) 190, 1650
XmiI GTMKAC 1 cut(s) 1362
XmnI GAANNNNTTC 2 cut(s) 519, 797
XspI CTAG 5 cut(s) 1388, 1484, 1490, 1709, 1853
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.