FvH4_5g20820

Vacuolar protein sorting-associated protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0004352
Physical Location & Seq
Reverse (-)
12370148 .. 12402753
32606 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g20820.t5

Sequence Viewer

Length: 13026 bp
ATGTTGGAGGATCAGGTGGCGAACCTCTTGCAGAGGTACCTGGGGAACTACGTGAAGGGGCTCAACAAAGAGGCCCTCAAGATCAGTGTCTGGCAAGGTGATGTGGAGCTAACAAATATGCAGTTGAAGCCCGAGGCACTGAATGCGTTAAAATTGCCTGTGAAGGTCAAGGCAGGATTTCTTGGATCCGTGAAACTTAAGGTTCCATGGAGCAGGCTAGGCCAGGATCCGGTGTTAGTTTCTTTGGATCGCATATTTCTATTAGCTGAGCCTGAAACGCAAGTTGAGGGAAGTAGTGAGGATGCTGTACAGGAAACTAAGAAAAACCGAGTGCAGGAAATGGAACAGAAGTTGTTGGAGAAGGCACAACAAATGAAGTCAGACGTGAATAAATCATGGTTGGGATCCCTGATCAGCACAATAATTGGAAACTTGAAACTTTCGATTTCAAATATTCACATCCGATACGAGGATCTTGAGAGCAATTTTGGTCATCCGTTTGCAGCGGGCGTAACGTTGGAGAGACTTTCAGCCATGACAGTTGATGATACTGGAAAAGAGACGTTTGTTACTGGGGGTGCACTAGACCGTATTCTGAAGTCTGTCGAACTTGATCGGCTTGCACTTTATCTGGATTCTGATATTGCTCCATGGCATGTTGACAAACAATGGGAGGACTTGCTTCCATCAGAGTGGGTTCAGGTTTTCAGATTTGGTACTAAAGAAGGTAAACCAGCTAATAAGTTGACCAGGAAGCATACTTATGTATTGGAACCTGTTTCTGGAAATGCTAAGTATTCAAAGCTACGGCAAAATGAATTTGCTGATATTGGTCAGCCTTTACATAAAGCAGCAGTTAATCTGGATGATGTGACTATCTGTTTGCCAAAGGACGGATACAGGGATGTACTGAAGTTAGCTGATAACTTTGCTGCCTTCAATCAGCGGTTGAAGTATGCTCATTATCGTCCACATGTCTCTGTAAAATCAGATCCCAGGTCTTGGTGGAAGTATGCTTATAAAGTTGTTTCTGACCAAATGAAGAAGGCAAGTGGGAAATTGTCGTGGGAGCAAGTTCTGAAGTATGCAAGATTACGTAAAAGATATATCTCTCTATATGCCTCACTACTTAGATCTGACCCTAATCGGGCAGTTGTTGAGGATAACAAAGATATTGAAGAACTAGATCGTGAACTTGATATTGAACTTATACTCCAGTGGAGGATGTTGGCTCACAAGTTTGTAGAGCAGTCATTAGAGTCAGAACAAGACTTGAGAAAACAAAAAGCAAAGAAATCTTCGTGGTTTGGATGGCGCAGTCAGTCTTTGAAAGATGAGAATGAGCCATTTCGTTTCACTGATGAAGAATGGAAGCAGTTAAATGAAATCATTGGGTATAAGGAAAGTGATGATAGACTGTTGGTCACAGTTGATGAAAAGAGGGATGCTCTCCAGACTTCCTTGAGCATTTCTATGAAACGTAATGCCACCAAACTTACTGATGAGTCTCAGAAGTGTCTTGCTGAATTATCGTGTGAAGGCATCGATTGCTCAATAAAGCTCTATCCAGAAACAAAAATTTTTGACCTAAACTTAGGATCATATAAGTTATCAACGCCAAACGGTCTCCTTGCCAAGAGTGCAAGCGCTTATGATTCTTTAGTTGGCGTCTTCTGTTTCAAGCCTTTTGACACCAAGGTGGACTGGAGCTTTGTTGCCAAGGCTTCTCCCTGTTATGTCACTTATCTAAAGGATGCAATTGATCAAATCATTAAGTTCTTTCGGAGTAATACAGTTAGCCAGAAGATAGCTATGGATACTGCAGCTGCAGTGCAGATGACCATCGATGGAGTCAAGCGTACAGCTCAGCAACAAGTGAACCGGGCATTAAAGGACCATTCCAGGTTTTTGTTGGACTTGGATATTGCGGCTCCTAAGATTACCATTCCTACTGACTTTTGTCCTGATAATGTGCATCCTACAAAACTGATGCTGGACTTGGGAAATTTGGTTATTCGCACCAAGGATGACCCTGATCATGGATCATTGGAGGAGCTAGATATGTATCTGCAGTTTAATTTGGTTCTAAGTGATGTTTCTGCTTTTTTGGTTGATGGCGACTACTTTTGGGGCCATTCTCCTTCAAAAAATTCTGCTGGTTCTTCCAACTCAAATGGTGTCAGTTTGTTGCCTTTTATTGACAAGTGTGGGGTAATTCTAACATTTCAACAGATTAGATTAGAGACTCCATCCTATCCTGCAACACGACTAGCTGTACGGGTCCCATCATTGGGGTTTCACTTCTCCCCAGCTCGGTATCATCGATTGATGCAAGTAGTTAAGATCTTTGAGGAGGAGGATAGTGAGAAGTCAGATCTCTTTGGCCCTTGGAATCAAGCTGACTTTGAGGGGTGGTCGTCTCTACTTGTTTTCAAGGGTCTGGGAAATAGGGAAGCAGTGTGGCAGCGACGCTACCTATGCCTAGTTGGTCCTTTCCTTTATGTACTGGAGAGCCCTAGCTCTAAATCGTACAAGCAATGTATCAGCTTGCAAGGGAAACACATATATCAGGTTCCCCCAGAGTGTGTTGGCAATGCCGATCTTGTTTTGGCCATCTGTGATTCTACACGAGCAAATAACAAGGTTGTGGAGGATGCAAATGCACTAATCTTGCGATTTGATTCTGATGATTCAAAGAAAACTTGGCATAGCCGGCTGCGGGGAGCTGTCTATCATGCATCGGGTTTTGCTCCTGTAACTGGTCTATCTGATACTTCATCAGAATCTGAGGATTCAGTAATGGAGCTCAATGGAAATCATGATATGGGTGATTTACCGAAGATGGAGAAGATATTTATTACTGGTGTTCTTGATGAACTAAAGGTCTGCTTCAGTTATAGTTATCAGCGTGACCAAAATATCATGAAGGTGCTCCTAACTGAAGAAAGGCGCTTATTTGAATTTCGAGCCATAGGTGGTCAGGTGGAGCTATCAGTTAGATCAAGTGACATCTTTATTGGAACTGTTTTAAAATCTTTGGAGATTGAAGACTTGGTTTCTGGGCATATCTTTTCCCAGCCGCGTTATCTGGCAAGATCATTCATCCATAGTGCTGCAACACTTACAACTTCTGATGCCCCAGTAAATCAGAGTTTTGATGGCTCTGGTTCAATCCCTTCGGAAGGCGATGATAAATTCTACGAGGCAACGGATAATTTGGTCGACTCTGAGAATATATTATTGAAACCCCCTAGTTTTACTCGTATTTCTGGTCTACTCCCTAGTGATGGAGTTCAAACAACAAAGGACATTGCACGGGATGATTCGATGGATAGCTTTGTGAAAGCTCAAGTCGTTATATATGACCAGAACTCTCCTCTGTATCATAATACAGATATGCAGGTCACAGTCACCCTGGCTACCCTATCATTTTTCTGTCGTCGACCAACAATTCTTGCGATACTGGAATTTGTAAATTCAATTACCATCAAGGATGAAAGCTGTGAATCTTTCAGCGACAGCTCTTCAACAGCTGTTACGAATCGTGATAGCAGAGATGATGAGGTTGATGGTTCTCAATCAATGGCAATCAACGAGCCTTCTGTTAAAGGATTGCTGGGAAAGGGGAAGACCAGAGTCGTTTTTAATATAACATTGAATATGGCCCGTGCTCAGATTTTATTAATGAATGAGGATGAAACTAAGCTTGCTGTTTTGTCACAAGATAATTTGCTAACGGATATTAAGGTATATCCATCCTCTTTTAGTATTAAGGCATCCCTCGGAAATCTTAAAGCAAGTGATGAGAGTCTTCCAAGCAGCCACATGTATTTCTGGGCGTGTGATATGAGAAACCCTGGAGGCAGCTCATTTGTTGAGTTGGTTTTCACTTCATTTAGTGCTGATGATGAAGACTATGAAGGTTATGAGTATAGCCTGTATGGGAAGCTTTCAGAAGTACGCATCGTATATCTGAATCGTTTTATCCAGGAGGTTGTAAGTTATTTTATGGGTCTTGTTCCCAAAAACTCAAAAGGAGTCGTGAAGCTAAAAGATCAAGTAACAAATTCAGAGAAGTGGTTTACAACTAGTGATTTTGAAGGATCACCTGCTATGAAGTTAGATTTGTCTCTTAGGAAGCCTATTATATTGATGCCTCGGAGAACGGACAGTCTTGACTATTTGAAGCTTGACATCGTTCAAATTACTGTTAAAAGCACCTCTCAATGGTTTGGTGGAAGCAGAAGTGACATTAATGCTGTTCATATGGAAGTATTAACAGTTCAGGTTGAGGATATCAATTTGAATGTTGGTTGTAAAGGAGAAATAGGTGAAAGCATAATTCAAGATGTGAAGGGAGTATCTGTTGTGATTCAAAGGTCACTACGAGACTTGTTGCATCAAATACCTAATGTTGAGGTTTTAATCAAGATGGAGAAATTGAAGGCAGCTTTGTCAAACAGTGAATACCAGATTATTACCGATTGTGCACAGTCCAACATTTCCGAAACTCCACGTATTGTGCCTCCATTGGACCTTGACCCTGTGTCATCTTCAAGTGAAGGTGAATCCATCACTCAGGATCCAAATGGTACTGCTTTTCCAGCTGCAAGTGGGGAAGCTCGGGTGATGATGAAAGTTTGCGTTGTCATTGATTTGGTTGAATTGTGCTTACATACTGGTCTAGGGAGTGATGCATCTCTTGCCACTGTGCAGATTACCGGTGCATGGCTACTCTACAAGACAAATACACTGGGGGACGGTTTCCTGTCAGCAACACTCAAGGGTTTCAGTGTGCTTGATGATCGTGAGGGTACTAAAGAAGAGTTTAGGTTGGCGATAGGAAAGCCTAAGAGTTTTGGTTCTTGTCCCGTAGATTCTGTTACTTATGATGACACTCAGCACATCACTGATGGAAATATCGGAAATTTTAATGATATGAATTTAGTTCCTACAATGCTCATTGTTGATGCCAAATTCGGCCAGGCTTTAACATCGGTCTCGTTATGTATCCAAAGGCCACAACTTCTTGTTGCACTTGATTTTCTGCTGGCTGTTGCTGAGTTTTTTATTCCTAAAGTCAGCGATGCGCTGTCAACTGAAGAAGTAAAGAACTCTGTTTATGGAATCAATGCAATAGTTTTCCATGAGTCTACTCACAAGCAACCCTCCACTGAATTCTCTGTCACTCCATTAAGACCATTGGTAGTTGATGATGAAAGATATGATCATTTCGTTTATGATGGTAATGGTGGAATATTGCATTTGAAAGATAGGCAGGGGTTCTATGTCTCTGGGCCTAGTACAGAGCCTATTATATACATAGGAGATGGGAAAAGATTGCAATTCAAAAATGTTGTTATCAAGAATGGACTGTACTTAGATTCATGTATATCCATGGGAAGCAACAGTAGCTATTCAGCTTTGAAGGAAGATCAAGTCTACATTGCGGGAGAGGATGAAGTTCCTAATTTGACTTCCTCTAGAGAAAGTCTCAAGAATTTGCCATCTGAAAGCGTTGCAGTCAACAAATCATCGGAGATTGTCATTGAGTTGCAGGTGGTTGGCCCAGAACTGACATTTTATAATACCTCCGAAAAAATTGGGGAATCACTGATGCTCTCTAATCAACTTTTACATGCTCAATTGGATGGATTCTGCAGGCTTGTTTTGAAAGGCGATACTATTGAGATGAATGCAAATGTGCTTGGTTTCACTATGGAGAGTAACGGAATAAGGATATTGGAACCATTTGATACTTCTGTAAAATATTCTAATGCTTCTGGAAGGACCAATATACATCTATCTGTTTCGGATATATTTATGAATTTTTCATTCAGTATCCTAAGGCTGTTTTTAGCAGTTGAGGAGGATATTTTGGATTTTTTGAGCACGACATCAAAGAAAATAACAGTGGTCTGCTCGCAGTTTGACAAGATTGGAACAATAAAAGATCCCTCCAGTGACCAAATATATGCCTTTTGGAGACCTCATGCACCTCCTGGTTTTGCAGTTCTTGGGGATTATCTGACACCATTGGACAAGCCACCTACAAAGACAGTTCTTGTTGTAAATACCAGTTTTTCCAGAGTCAAGAAGCCCCTATCTTTCAAACTAATTTGGCCACCTTTACCTTCTTCTGAGTCGTCTTTTCATGGTGTAAATGATTCGGATAGAATACCAAATAATGTCATTTATGATGAAAGTAGCTGCTCCATTTGGTTTCCTGAAGCTCCTGCCGGATATGTTGCATTGGGCTGTGTGGTTTCACCCAGAAGAGCACAGCCACCATTATCTTCTGCCTTTTGTATCTCGGCTTCATTAGTTTCTCCTTGTTCCCTAAGGGACTGCATTGCAATTAACACCAAAGATCCATATCAGTCGAGTTTAGCATTCTGGCGAGTGGATAATTCTGTTGGGACCTTTTTGCCAGCAGATATTAATACTTCTAGCATTACTGGTAGAGCATATGATTTGCGTCACATCATATTTGGATTTCCCGAAGCCTCTTTAAAATCATCCAATAGTTTGAATGCCCAAAGTTCTGCTCAAAGTCACAATCCGCCGTCAGAAAGATCAGAAACAGTAAACTCTGGTCGCCGATGTGAAATTGTTGCTAGTTTTCGTTTGATATGGTGGAACCAAGGCTCAAATTCAACAAAAAGGCTATCTATATGGCGTCCGGTTGTACCTCCGGGAATGATATACTTCGGTGATATTGCAGTGAAAGGGTATGAGCCTCCTAATACCTGCATTGTTCTTCATGATACTGAAGATGAAGAGCTTTTCAAAGCCCCTCTCGATTACCAAATTGTTGGGCAAATTAAGAAACAGAGGGGAATGGAGAGTGTGTCCTTTTGGCTTCCTCAAGCTCCTCCAGGGTTTGTTGCCCTTGGTTGTATTGCATGTAAGGGGACACCGAAGCAATCTGATTTCAGCTCATTACGATGCATTCGCAGTGATTTGGTAACTGGGGATGAATTTTCAGAGGAGAGTGTATGGGATACATCTGATGCCAAGCTTACAAAAGACTCATTCAGTATATGGGCAGTTGGCAATGAGTTGAGTACCTTTCTAGTTCGTGGTGGTTTGAAGAAACCTCCAAGAAGGTTTGCTTTAAGGCTGGCTGATTCAAATGCACCTGCTGGCTCAGATGATACTGTAATTGATGCGGAAATTAGAACCTTTTCTGCAGCACTTTTTGATGACTATGGTGGCCTGATGGTTCCATTGTGTAATTTATCTCTAAGTGGAATTGGGTTCAGTTTGCATGGAAGGACAGATTACTTGAATTCGACTGTAAGCTTCTCTTTGGCTGCTAGATCATATAATGATAAGTATGAAGTTTGGGAACCTCTTGTTGAGCCAGTAGATGGTTTCCTAAGATACCAATATGATCTCAATGCACCAAGTGCAGCATCTCAGTTACGCCTTACATCGACTAGGGATCTGAACTTGAACATTTCTGTGTCTAATGCTAATATGATAATTCAAGCTTATGCAAGCTGGAACAGTCTTGTTAATGTGCCTGAATATCATGAGAAGGGGGAAGCATTCTCCACAACAGACGGTGAACGATCTGTTCTTGACATCCATCACAGGAGGAACTATGATATAATCCCACAAAACAAGCTAGGACAGGATATCTTTATTCGAGCTACTGAGTTCAGAGGACTTACAAACATAATTAAGATGTCATCTGGAGATGTGAGGCCTGTAAAAGTCCCTGTTTCCAAGAATATGTTGGACTCTCATTTGAAAGGAAAACTTTTCCTCAAAGTTAGAACAATGGTGACTTTCATCATAGTGGATGGGCAGTTCCCACAGGTTAATGGGTTGACATCTCCCCATTATACCTTAGCAATCCGTCTCATTCCTGACCAGACTGTCCTTAGTGAAACACTGATTCACCAACAAAGTGCACGCACTTGTGGAAGCAGCTCCAAACACCTATCTCCAGAGCTTGAATTGGTCAAATGGAATGAAATATTTTTCTTTAAAGTCGACTCTCCAGACTACTACTCTGTTGAATTAATTGTGACGGACATGGGGAATGCAGGGCTCCCTCTTGGATTCTTTTCAGCCCCTCTAAAGCAGATTGTGGGGAATTTTAATGACGATTCATATCCATATGATAATGTCAAGAAGTGGACAACCATTGAATTGTCCTCGCCAGAGTCTATGGATAATAACCATAAGAAGTTGGGTGGGAAAATCAGATGTGCTGTATTGCTGTCACCAAAATCTGAAGGAGAGATAAGTGATCAATATGATAACAGTAAAACAAAATCTGGATTTATCCAGATCAGTCCTAGAAGGGAAGGACCATGGACTACTGTGCGGCTAAACTATGCTGCCCCCGCTGCTTGTTGGCGGTTAGGAAATGATGTTGTTGCTAGTGAAGTACGTGTAAGGGATGGCAATAGATATGTGAATATTAGGTCTCTTGTTTCAGTACGTAACAGTACTGATTTTGTGCTGGATTTGTGTCTTGTACCGAAAGTTTCTATGGAGAAGGTGAGTTTAACAGATGATGCAAGTACTCCCGAGGGTTTGCAGACCCATAGCAACAATTTTCAGACAGATGAGTTCCTTGAAACTGAAAAGTACAGCCCTACCACTGGCTGGGTTGGCTCCATGATTCAGCCAAGCCAAGATATAATTGAAAGTGGAGGATCCCATCAGGAAATTCCTACAGTTGAGTTACTACCAGGCTGGGAGTGGGTTGATGATTGGCATTTGGATATGGCATCTATCGACACTGCTGATGGCTGGATCTATGCTCCAGATATTGCAAGTCTGAAATGGCCCGAGTCATTTGATCCCTTAAGATTTGTAAATTATGCAAGACAAAGGAGATGGATCAGGAATAGGAAACAAAGTACTACAAATCAGGAAATACATGTTGGAACTTTGAAACCTGGAGATACCATACCCCTTCCTCTATATGGGTTAACCCAACCTGGATTGTATGTCTTACGTTTAAAGCCTTCTAATCTTAGCCATCATGATGAGTATTCTTGGAGTTCAGTGGTTGATGGGTCTGAAGAACCAGAAGAGTCTGCTTCGTCAAAAGTATGTCCCGAGATAAGTGTATCGGCTCTCACTGAGTCGGAGAAACTGTTGTATTGCTCGCAGATAAGTAGTACTTCTTCTAGTGTTTCCCACAAATTGTGGTTTTGTATGAGTATACAGGCGACAGAAATTGCCAAAGACATTCATTCTGATTCTATCCAGGATTGGAATCTTGTGGTCAAGTCCCCCCTATCTATCTCCAATTTTCTTCCCCTTGCAGCTGAATATTCTGTTCTTGAGATGCAAGAAAATGGTGGTTTCGTTGCCTGCTCCAGAGGAGTGTTTTCTCCAGGAAAAACTGTGAATGTTTTTACTGCCGACATAAGAAAACCTTTATACTTTTCACTGCTTCCACAAAGAGGATGGTTGCCCATACATGAAGCTGTCCTTTTGTCCCATCCTCAAGAAGTTTCAGCAAAAACCATTAACTTAAGAAGTTCGATATCTGGAAGGATTGTTCAAATTATTCTTGAGCAGAATCCTATTGAAGAGCGTCCACTGCATGCTAAGATCATTAGACTCTATGCTCCATATTGGTTTTCAATTGCTAGGTGTCCTCCTCTCACATTCAGGCTTGTAGATATAGAAGGGAAGAAAGAAACACGAAAGATGGGTGGTTTATTCCAGTCTAAAAAGAATAGTGAAGTCGTCCTAGAGGAGATAACTGAAGAGGAAATATATGAGGGTCATACAATTGCTTCAGCTTTGAAATTTAAAATGCTGGGACTTTCTGTGTCGATTGATCAATCTGGCAACAAGCAGTTTGGACCTGTTCAAGATCTTTCTCCCCTTGGTGATATGGATGGATCATTGGATACCCTTGCTTATGACGGCGAAGGTAATTGCATGCAGCTTTTTATTACCACGAAACCATGCCTGTTTCAATCTGTTCCTACAAAGGTAATATTTGTCCGACCATTTATGACATTTACCAACAGGCTTGGTCGTGATGTATATATTAAGTTATGCGGTGAGGATGAACCAAAAGTCCTTCGTCCATGTGATTCAAGAATACCATTTGTATACCGTGTATCAGATGGACCTAATAAACTTCAGGTTCGATTAGAAGACACCAACTGGTCATTTCCTGTTCAAATTGTAAAAGAGGACACAATTTCTCTTGTTTTAAGGAAGCATGATGGTACTCGGACATTTTTGAGAACGGAAATTCGGGGATATGAAGAAGGCTCACGTTTCATCGTTGTTTTCCGCCTCGGATCATCTAATGGTCCTATCAGAATTGAAAACAGAACTGTCACCAAAACAATTAGCATTCGCCAGTCTGGGTTTGATGAAGACGCATGGGTTCCTCTAGAACCTTTTTCAACAACAAATTTTGCTTGGGAGGACCCATACGGCCAAAGATTCATAGAAGCTAAGGTGGACAATGGCCTCTCCACTGGAGTTTGGGAACTTGATCTGGAAACAACAGACATATTTTCTTCTGAGGAACTAGGGTTGCAGTTTCATGTTGTAGAAATTGGTGATATCAGGATAGGAAGGTTCAGTGACACCAGAACTATAGATGCAAGTTTGCACGAACAAAATAGGTCTCTGCAACTTGCTGGAAGTTGGGGATATTCTAACCTGCAGAATACGAATCAGAATAATGGTGCCTCACCTCTTGAGATTATAATTGAGTTTGGAGTTGTGGGCCTTTCAATTATAGACCATAGACCAAAGGAGGTCTCCTACTTCTATTTTGAGAGGGTCTTCGTATCGTATTCGACGGGCTATGATGGTGGGATGACAAGCAGGTTTAAGCTCATACTGGGCCACGTGCAGTTGGACAACCAGCTTCCTCTAACAGTGATGCCAGTTCTGTTGGCTCCTGAGCCGGATTCTGATATGCATCTTCCAGTTTTCAAGATGACTATAACAATGCGTAATGAAAATACTGATGGCATCCAGGTCTATCCTTATATTTATATCCGGGTAACTGAGAAGAGTTGGAGGCTTAATATTCATGAACCTATAATTTGGGCTTTGGTGGATCTGTACAATAACTTACAGTTAGATCGTGTTCCTAAAAGTTCTACTGTTGCAGAAGTTGATCCAGAAATACGCATCGACCTGATAGACATTTCAGAAGTTAGGCTAAAGGTGTCACTGGAAACAGCACCATCTGAGAGACCTCATGGGGTTCTAGGAGTATGGAGCCCAATACTATCAGCAGTTGGAAATGCATTCAAGATTCAGGTGCATCTGAGGAGGGTAATGCACAAAGACAGATTCATGCGGAGAAGTTCTATTGTCTCTGCCATTGGTAACCGTGTTTGGAGAGACTTGATCCATAATCCTCTACATCTGTTATTTTCGGTTGATGTTCTTGGTATGACAAGTTCAACTTTGGCTTCTCTTAGTAAAGGGTTTGCTGAGCTCTCAACTGATGGGCAGTTTACGCACCTACGGTCAAAACAGGTATTTTCAAGGAGAATTACGGGGGTGGGTGATGGAATCATTCAAGGCACAGAAGCATTTGTGCAAGGTGTAGCTTTCGGGGTATCTGGGGTAGTGAAAAAGCCAGTTGAGAGTGCAAGACAGAATGGTCTGTCAGGACTTGTTCACGGGCTTGGACGTGCATTCCTGGGTGTTATTGTGCAACCAGTGAGTGGAGCGTTGGACTTTTTCTCATTGACTGTCGATGGAATTGGAGCAAGTTGTTCGAAATGCCTAGAGGTCTTCAATAGCAAGACCACATTCCAGAGAATTAGAAGCCCCCGAGCAATCCGTGCCAATGGTATACTTAGAGAGTATTCTGAGAGAGAAGCAGTTGGGCAGATGATTTTATACCTCGCAGAAGCACATCGGCACTTTGGTTGTACTGAATTATTCAAGGAGCCCTCAAAGTTTGCTTGGTCTGATTATTATGAAGAGCATTTTGTTGTGCCTTACCAGCGAATTGTTTTAGTGACCAATAAGCGAGTGATGTTGCTTCAGTGTTTGGCTCCAGACAAAATGGACAAGAAACCGTGCAAGATTATGTGGGATGTGCCTTGGGAAGAGCTTATGGCTGTGGAGCTGGCTAAAGCAGGCCACAATCAGCCATCTCACTTGATCCTCCACCTGAAAAGTTTCAGGAGATCGGAGAATTTTGTTCGGGTCATAAAGTGCAATGTTGAAGAAGAACCAGAGGGAAGGGAACCCCAAGTTGTTAGGATCTGTTCTACAGTATGTAAGATGTGGAAAGCATACCAGTCTGCCTTGAAAAGCCTAATGTTGAAGGTTCCATCAAGTCAGCGACATGTGTATTTTGCCTGGTCTGAAGCCGATGGGAGAGAAAAACGTACTCTGAACAAAGCAGTGACTAGGCTGAGAGAGCTCCCATCATACAGTTCTGCATCAGATGGTAGAAGGTTTGTTAAACACAGCATCAACTTTTCAAAAATTTGGAGCAGTGAACAGGAATCCAGAGGTCGATGCACATTGTGCAAAAAGCAGGTTTCGGAAGCTGCTGGATTATGTAGCATTTGGAGACCCATTTGTCCTGACGGGTATGTCTCTGTTGGAGATATTGCTCACATTGGCAGCCATCCTCCAAACGTTGCTGCAGTTTACCGTAAAATTGACAGGTTGTTTGCACTTCCTGTTGGATACGACCTGGTATGGAGAAATTGCTTGGATGACTATGCAACACCAGTATCAATATGGCATCCTAGAGCTCCAGAAGGATTTGTATCTCTGGGATGCGTTGCTGTGGCTGGTTTTGTTGAGCCAGAACCAGATCTGGTTCACTGTGTGGCTATATCACTTGCCGAGGAGACAGAATTTGAAGAGCAAAAGGTTTGGTCAGCTCCAGATTCTTATCCATGGGCATGTCATATTTATCAAGTCCACAGTGAAGCTCTTCACTTCGTGGCATTAAGACAAAGCAAGGAAGAATCTGACTGGAAACCTTTGAGGATTCTTGATGATCCTCAGGCCCTACTGCAGTCATTGAAAGAGAACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Chorein_N PH Pex24p SHR-BD VPS13 VPS13_C VPS13_mid_rpt Vps62

Protein Analysis

4342

Amino Acids

486.11

Weight (kDa)

5.69

Isoelectric Point (pI)

43.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
VPS13_N PF12624 1 - 535 2.3e-103 VPS13-like family N-terminal region
VPS13_N PF12624 558 - 678 5.7e-10 VPS13-like family N-terminal region
PH PF00169 802 - 910 1.3e-07 PH domain
VPS13_M PF25033 1318 - 1968 4.3e-08 VPS13-like family middle region
Vps62 PF06101 2093 - 2239 1.3e-11 Vacuolar protein sorting-associated protein 62
VPS13_VAB PF25036 2829 - 3365 1.2e-19 Vacuolar-sorting associated protein 13, adaptor binding domain
VPS13_C PF25037 3816 - 3924 2.2e-13 Intermembrane lipid transfer protein VPS13, C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 1020, 5586, 10709
AarI CACCTGC 3 cut(s) 4117, 5548, 7150
AasI GACNNNNNNGTC 4 cut(s) 7886, 11622, 12558, 12572
Acc36I ACCTGC 8 cut(s) 3391, 4117, 5548, 6758, 7150, 10671, 10821, 12505
Acc65I GGTACC 1 cut(s) 36
AccB1I GGYRCC 2 cut(s) 36, 10688
AccB7I CCANNNNNTGG 4 cut(s) 1002, 7373, 8625, 11687
AccI GTMKAC 9 cut(s) 3222, 3274, 3442, 5153, 5442, 8004, 9190, 10098, 11818
AccII CGCG 1 cut(s) 3082
AclI AACGTT 2 cut(s) 515, 12618
AcoI YGGCCR 4 cut(s) 2610, 4981, 6122, 10432
AcvI CACGTG 1 cut(s) 10855
AcyI GRCGYC 2 cut(s) 1668, 6679
AdeI CACNNNGTG 4 cut(s) 7412, 12504, 12814, 12931
AfeI AGCGCT 1 cut(s) 1648
AflII CTTAAG 3 cut(s) 197, 8827, 9505
AflIII ACRYGT 5 cut(s) 973, 3825, 8407, 8902, 12319
AgeI ACCGGT 1 cut(s) 4721
AhdI GACNNNNNGTC 2 cut(s) 1421, 4546
AhlI ACTAGT 1 cut(s) 4088
AjiI CACGTC 2 cut(s) 385, 11654
AjuI GAANNNNNNNTTGG 2 cut(s) 8889, 8921
AleI CACNNNNGTG 1 cut(s) 1697
AloI GAACNNNNNNTCC 8 cut(s) 1197, 1229, 7802, 7834, 9516, 9548, 10047, 10079
Alw44I GTGCAC 3 cut(s) 579, 4488, 7920
AlwNI CAGNNNCTG 2 cut(s) 90, 2786
Ama87I CYCGRG 6 cut(s) 131, 4623, 8546, 8810, 9083, 11796
Aor51HI AGCGCT 1 cut(s) 1648
ApaLI GTGCAC 3 cut(s) 579, 4488, 7920
ArsI GACNNNNNNTTYG 6 cut(s) 865, 897, 1694, 1726, 12635, 12667
AseI ATTAAT 4 cut(s) 3683, 4254, 6441, 8033
AsiGI ACCGGT 1 cut(s) 4721
Asp700I GAANNNNTTC 3 cut(s) 7186, 12149, 12921
Asp718I GGTACC 1 cut(s) 36
AspLEI GCGC 4 cut(s) 1317, 1649, 2952, 5092
AsuC2I CCSGG 3 cut(s) 1883, 6696, 11009
AsuII TTCGAA 1 cut(s) 11741
AvaI CYCGRG 6 cut(s) 131, 4623, 8546, 8810, 9083, 11796
AxyI CCTNAGG 3 cut(s) 5846, 6341, 12993
BaeGI GKGCMC 3 cut(s) 583, 4492, 7924
BaeI ACNNNNGTAYC 4 cut(s) 5748, 5781, 12699, 12732
BalI TGGCCA 2 cut(s) 2612, 6124
BamHI GGATCC 5 cut(s) 185, 226, 404, 4582, 8675
BanI GGYRCC 2 cut(s) 36, 10688
BanII GRGCYC 9 cut(s) 63, 2516, 2808, 8064, 11237, 11457, 11919, 12399, 12739
BarI GAAGNNNNNNTAC 4 cut(s) 6301, 6333, 9136, 9168
BauI CACGAG 1 cut(s) 2628
BbrPI CACGTG 1 cut(s) 10855
BbsI GAAGAC 9 cut(s) 1663, 3054, 3635, 3803, 3918, 10149, 10377, 10780, 11749
BceAI ACGGC 4 cut(s) 824, 6550, 9922, 10447
BcgI CGANNNNNNTGC 4 cut(s) 10, 44, 11721, 11755
BciVI GTATCC 7 cut(s) 890, 1810, 5021, 5852, 6997, 9883, 12662
BclI TGATCA 6 cut(s) 411, 1762, 2035, 5227, 8263, 9817
BcnI CCSGG 3 cut(s) 1883, 6696, 11009
BcuI ACTAGT 1 cut(s) 4088
BfoI RGCGCY 2 cut(s) 1650, 2953
BfrI CTTAAG 3 cut(s) 197, 8827, 9505
BfuAI ACCTGC 8 cut(s) 3391, 4117, 5548, 6758, 7150, 10671, 10821, 12505
BfuI GTATCC 7 cut(s) 890, 1810, 5021, 5852, 6997, 9883, 12662
BglII AGATCT 5 cut(s) 1133, 2343, 2374, 9853, 12799
BlpI GCTNAGC 3 cut(s) 267, 1866, 11451
BmcAI AGTACT 4 cut(s) 8467, 8542, 8884, 9148
BmeRI GACNNNNNGTC 2 cut(s) 1421, 4546
BmeT110I CYCGRG 6 cut(s) 131, 4623, 8546, 8810, 9083, 11796
BmgBI CACGTC 2 cut(s) 385, 11654
BmrI ACTGGG 5 cut(s) 582, 3134, 4763, 6981, 10856
BmuI ACTGGG 5 cut(s) 582, 3134, 4763, 6981, 10856
BoxI GACNNNNGTC 2 cut(s) 1959, 3635
BpiI GAAGAC 9 cut(s) 1663, 3054, 3635, 3803, 3918, 10149, 10377, 10780, 11749
BplI GAGNNNNNCTC 4 cut(s) 1432, 1464, 5478, 5510
Bpu10I CCTNAGC 3 cut(s) 7858, 10452, 10908
Bpu1102I GCTNAGC 3 cut(s) 267, 1866, 11451
Bpu14I TTCGAA 1 cut(s) 11741
BpuMI CCSGG 3 cut(s) 1883, 6696, 11009
Bsa29I ATCGAT 3 cut(s) 1545, 1845, 2323
BsaAI YACGTR 6 cut(s) 52, 1097, 4517, 8408, 8459, 10855
BsaBI GATNNNNATC 8 cut(s) 1841, 2064, 6375, 8124, 9243, 10926, 12751, 12879
BsaHI GRCGYC 2 cut(s) 1668, 6679
BsaI GGTCTC 8 cut(s) 1631, 5005, 5980, 8448, 10632, 10768, 11200, 12544
BsaWI WCCGGW 3 cut(s) 229, 4721, 6682
BsaXI ACNNNNNCTCC 8 cut(s) 1197, 1227, 4350, 4380, 6836, 6866, 9107, 9137
Bse118I RCCGGY 2 cut(s) 2712, 4721
Bse21I CCTNAGG 3 cut(s) 5846, 6341, 12993
Bse3DI GCAATG 7 cut(s) 2543, 2599, 3309, 5445, 6351, 7063, 12196
Bse8I GATNNNNATC 8 cut(s) 1841, 2064, 6375, 8124, 9243, 10926, 12751, 12879
BseCI ATCGAT 3 cut(s) 1545, 1845, 2323
BseJI GATNNNNATC 8 cut(s) 1841, 2064, 6375, 8124, 9243, 10926, 12751, 12879
BseMI GCAATG 7 cut(s) 2543, 2599, 3309, 5445, 6351, 7063, 12196
BseSI GKGCMC 3 cut(s) 583, 4492, 7924
BseYI CCCAGC 6 cut(s) 2308, 3075, 3616, 8625, 8715, 9796
BsgI GTGCAG 5 cut(s) 353, 1853, 4733, 7434, 10877
Bsh1236I CGCG 1 cut(s) 3082
BshNI GGYRCC 2 cut(s) 36, 10688
BshTI ACCGGT 1 cut(s) 4721
BshVI ATCGAT 3 cut(s) 1545, 1845, 2323
BsiHKCI CYCGRG 6 cut(s) 131, 4623, 8546, 8810, 9083, 11796
BsiSI CCGG 9 cut(s) 230, 1882, 2713, 4722, 6240, 6683, 6695, 10913, 11008
BsmBI CGTCTC 3 cut(s) 554, 2424, 7874
Bso31I GGTCTC 8 cut(s) 1631, 5005, 5980, 8448, 10632, 10768, 11200, 12544
BsoBI CYCGRG 6 cut(s) 131, 4623, 8546, 8810, 9083, 11796
Bsp119I TTCGAA 1 cut(s) 11741
Bsp1407I TGTACA 2 cut(s) 307, 11073
Bsp1720I GCTNAGC 3 cut(s) 267, 1866, 11451
Bsp19I CCATGG 5 cut(s) 206, 650, 5397, 8327, 12884
BspDI ATCGAT 3 cut(s) 1545, 1845, 2323
BspFNI CGCG 1 cut(s) 3082
BspHI TCATGA 6 cut(s) 2818, 2922, 6763, 7537, 9007, 11041
BspMAI CTGCAG 8 cut(s) 1825, 1831, 2073, 5663, 7195, 10668, 12628, 13008
BspMI ACCTGC 8 cut(s) 3391, 4117, 5548, 6758, 7150, 10671, 10821, 12505
BspQI GCTCTTC 8 cut(s) 3529, 6271, 6774, 9558, 11943, 12072, 12843, 12927
BspT104I TTCGAA 1 cut(s) 11741
BspT107I GGYRCC 2 cut(s) 36, 10688
BspTI CTTAAG 3 cut(s) 197, 8827, 9505
BspTNI GGTCTC 8 cut(s) 1631, 5005, 5980, 8448, 10632, 10768, 11200, 12544
BsrDI GCAATG 7 cut(s) 2543, 2599, 3309, 5445, 6351, 7063, 12196
BsrFI RCCGGY 2 cut(s) 2712, 4721
BsrGI TGTACA 2 cut(s) 307, 11073
BssAI RCCGGY 2 cut(s) 2712, 4721
BssNAI GTATAC 3 cut(s) 9191, 10099, 11819
BssNI GRCGYC 2 cut(s) 1668, 6679
BssSI CACGAG 1 cut(s) 2628
Bst1107I GTATAC 3 cut(s) 9191, 10099, 11819
Bst2BI CACGAG 1 cut(s) 2628
BstACI GRCGYC 2 cut(s) 1668, 6679
BstAFI CTTAAG 3 cut(s) 197, 8827, 9505
BstAPI GCANNNNNTGC 6 cut(s) 143, 1548, 4703, 7412, 11807, 12504
BstAUI TGTACA 2 cut(s) 307, 11073
BstBAI YACGTR 6 cut(s) 52, 1097, 4517, 8408, 8459, 10855
BstBI TTCGAA 1 cut(s) 11741
BstDSI CCRYGG 5 cut(s) 206, 650, 5397, 8327, 12884
BstEII GGTNACC 1 cut(s) 11342
BstENI CCTNNNNNAGG 1 cut(s) 3180
BstFNI CGCG 1 cut(s) 3082
BstH2I RGCGCY 2 cut(s) 1650, 2953
BstHHI GCGC 4 cut(s) 1317, 1649, 2952, 5092
BstPAI GACNNNNGTC 2 cut(s) 1959, 3635
BstPI GGTNACC 1 cut(s) 11342
BstSLI GKGCMC 3 cut(s) 583, 4492, 7924
BstSNI TACGTA 2 cut(s) 1097, 8459
BstUI CGCG 1 cut(s) 3082
BstV2I GAAGAC 9 cut(s) 1663, 3054, 3635, 3803, 3918, 10149, 10377, 10780, 11749
BstXI CCANNNNNNTGG 2 cut(s) 693, 6815
BstZ17I GTATAC 3 cut(s) 9191, 10099, 11819
Bsu15I ATCGAT 3 cut(s) 1545, 1845, 2323
Bsu36I CCTNAGG 3 cut(s) 5846, 6341, 12993
BsuI GTATCC 7 cut(s) 890, 1810, 5021, 5852, 6997, 9883, 12662
BsuTUI ATCGAT 3 cut(s) 1545, 1845, 2323
BtgI CCRYGG 5 cut(s) 206, 650, 5397, 8327, 12884
BtgZI GCGATG 2 cut(s) 3201, 5100
BtrI CACGTC 2 cut(s) 385, 11654
BtsI GCAGTG 9 cut(s) 1836, 2463, 6729, 6964, 8760, 9419, 9572, 12384, 12478
BveI ACCTGC 8 cut(s) 3391, 4117, 5548, 6758, 7150, 10671, 10821, 12505
CaiI CAGNNNCTG 2 cut(s) 90, 2786
CciI TCATGA 6 cut(s) 2818, 2922, 6763, 7537, 9007, 11041
CfoI GCGC 4 cut(s) 1317, 1649, 2952, 5092
Cfr10I RCCGGY 2 cut(s) 2712, 4721
ClaI ATCGAT 3 cut(s) 1545, 1845, 2323
CseI GACGC 6 cut(s) 1657, 2478, 6467, 6668, 9557, 10382
CsiI ACCWGGT 1 cut(s) 12675
CspAI ACCGGT 1 cut(s) 4721
DraI TTTAAA 5 cut(s) 3030, 6513, 7999, 8985, 9790
DraIII CACNNNGTG 4 cut(s) 7412, 12504, 12814, 12931
DrdI GACNNNNNNGTC 4 cut(s) 7886, 11622, 12558, 12572
DriI GACNNNNNGTC 2 cut(s) 1421, 4546
DseDI GACNNNNNNGTC 4 cut(s) 7886, 11622, 12558, 12572
EaeI YGGCCR 4 cut(s) 2610, 4981, 6122, 10432
Eam1105I GACNNNNNGTC 2 cut(s) 1421, 4546
EciI GGCGGA 2 cut(s) 6552, 10274
Ecl136II GAGCTC 4 cut(s) 2806, 11455, 12397, 12737
Eco105I TACGTA 2 cut(s) 1097, 8459
Eco147I AGGCCT 1 cut(s) 7714
Eco24I GRGCYC 9 cut(s) 63, 2516, 2808, 8064, 11237, 11457, 11919, 12399, 12739
Eco31I GGTCTC 8 cut(s) 1631, 5005, 5980, 8448, 10632, 10768, 11200, 12544
Eco32I GATATC 4 cut(s) 4297, 7645, 9519, 10564
Eco47III AGCGCT 1 cut(s) 1648
Eco53kI GAGCTC 4 cut(s) 2806, 11455, 12397, 12737
Eco72I CACGTG 1 cut(s) 10855
Eco81I CCTNAGG 3 cut(s) 5846, 6341, 12993
Eco88I CYCGRG 6 cut(s) 131, 4623, 8546, 8810, 9083, 11796
Eco91I GGTNACC 1 cut(s) 11342
EcoICRI GAGCTC 4 cut(s) 2806, 11455, 12397, 12737
EcoNI CCTNNNNNAGG 1 cut(s) 3180
EcoO109I RGGNCCY 5 cut(s) 73, 2281, 6420, 10423, 12997
EcoO65I GGTNACC 1 cut(s) 11342
EcoRI GAATTC 2 cut(s) 5177, 7291
EcoRV GATATC 4 cut(s) 4297, 7645, 9519, 10564
EcoT22I ATGCAT 5 cut(s) 2740, 4699, 6953, 10929, 11263
EcoT38I GRGCYC 9 cut(s) 63, 2516, 2808, 8064, 11237, 11457, 11919, 12399, 12739
Esp3I CGTCTC 3 cut(s) 554, 2424, 7874
FauI CCCGC 4 cut(s) 499, 2712, 5443, 8368
FauNDI CATATG 3 cut(s) 4266, 6469, 8131
FbaI TGATCA 6 cut(s) 411, 1762, 2035, 5227, 8263, 9817
FblI GTMKAC 9 cut(s) 3222, 3274, 3442, 5153, 5442, 8004, 9190, 10098, 11818
FriOI GRGCYC 9 cut(s) 63, 2516, 2808, 8064, 11237, 11457, 11919, 12399, 12739
GlaI GCGC 4 cut(s) 1316, 1648, 2951, 5091
GsaI CCCAGC 6 cut(s) 2312, 3079, 3620, 8629, 8719, 9800
HaeII RGCGCY 2 cut(s) 1650, 2953
HapII CCGG 9 cut(s) 230, 1882, 2713, 4722, 6240, 6683, 6695, 10913, 11008
HgaI GACGC 6 cut(s) 1657, 2478, 6467, 6668, 9557, 10382
HhaI GCGC 4 cut(s) 1317, 1649, 2952, 5092
Hin1I GRCGYC 2 cut(s) 1668, 6679
Hin6I GCGC 4 cut(s) 1315, 1647, 2950, 5090
HinP1I GCGC 4 cut(s) 1315, 1647, 2950, 5090
HincII GTYRAC 9 cut(s) 661, 747, 3223, 3443, 5097, 5527, 7839, 8005, 8955
HindII GTYRAC 9 cut(s) 661, 747, 3223, 3443, 5097, 5527, 7839, 8005, 8955
HindIII AAGCTT 6 cut(s) 3704, 3947, 4187, 7019, 7303, 7494
HpaI GTTAAC 1 cut(s) 8955
HpaII CCGG 9 cut(s) 230, 1882, 2713, 4722, 6240, 6683, 6695, 10913, 11008
Hpy99I CGWCG 3 cut(s) 2472, 3444, 10807
Hsp92I GRCGYC 2 cut(s) 1668, 6679
HspAI GCGC 4 cut(s) 1315, 1647, 2950, 5090
KflI GGGWCCC 1 cut(s) 2281
KpnI GGTACC 1 cut(s) 40
KroI GCCGGC 1 cut(s) 2712
KroNI GCCGGC 1 cut(s) 2714
Ksp22I TGATCA 6 cut(s) 411, 1762, 2035, 5227, 8263, 9817
KspAI GTTAAC 1 cut(s) 8955
LguI GCTCTTC 8 cut(s) 3529, 6271, 6774, 9558, 11943, 12072, 12843, 12927
MabI ACCWGGT 1 cut(s) 12675
MfeI CAATTG 4 cut(s) 1758, 5645, 9618, 9768
MlsI TGGCCA 2 cut(s) 2612, 6124
MluNI TGGCCA 2 cut(s) 2612, 6124
Mox20I TGGCCA 2 cut(s) 2612, 6124
Mph1103I ATGCAT 5 cut(s) 2740, 4699, 6953, 10929, 11263
MroNI GCCGGC 1 cut(s) 2712
MroXI GAANNNNTTC 3 cut(s) 7186, 12149, 12921
MscI TGGCCA 2 cut(s) 2612, 6124
Msp20I TGGCCA 2 cut(s) 2612, 6124
MspA1I CMGCKG 7 cut(s) 506, 946, 1826, 3533, 4607, 8363, 9296
MspCI CTTAAG 3 cut(s) 197, 8827, 9505
MspI CCGG 9 cut(s) 230, 1882, 2713, 4722, 6240, 6683, 6695, 10913, 11008
MunI CAATTG 4 cut(s) 1758, 5645, 9618, 9768
MvnI CGCG 1 cut(s) 3082
NaeI GCCGGC 1 cut(s) 2714
NciI CCSGG 3 cut(s) 1883, 6696, 11009
NcoI CCATGG 5 cut(s) 206, 650, 5397, 8327, 12884
NdeI CATATG 3 cut(s) 4266, 6469, 8131
NgoMIV GCCGGC 1 cut(s) 2712
NmeAIII GCCGAG 2 cut(s) 6293, 12856
NsiI ATGCAT 5 cut(s) 2740, 4699, 6953, 10929, 11263
NspV TTCGAA 1 cut(s) 11741
OliI CACNNNNGTG 1 cut(s) 1697
PaeI GCATGC 2 cut(s) 9581, 9925
PagI TCATGA 6 cut(s) 2818, 2922, 6763, 7537, 9007, 11041
PaqCI CACCTGC 3 cut(s) 4117, 5548, 7150
PceI AGGCCT 1 cut(s) 7714
PciI ACATGT 4 cut(s) 973, 3825, 8902, 12319
PciSI GCTCTTC 8 cut(s) 3529, 6271, 6774, 9558, 11943, 12072, 12843, 12927
PcsI WCGNNNNNNNCGW 1 cut(s) 2320
PdiI GCCGGC 1 cut(s) 2714
PdmI GAANNNNTTC 3 cut(s) 7186, 12149, 12921
PflMI CCANNNNNTGG 4 cut(s) 1002, 7373, 8625, 11687
PfoI TCCNGGA 4 cut(s) 3987, 6694, 9234, 9364
PinAI ACCGGT 1 cut(s) 4721
PmaCI CACGTG 1 cut(s) 10855
PmlI CACGTG 1 cut(s) 10855
Ppu21I YACGTR 6 cut(s) 52, 1097, 4517, 8408, 8459, 10855
PpuMI RGGWCCY 3 cut(s) 2281, 6420, 10423
PscI ACATGT 4 cut(s) 973, 3825, 8902, 12319
PshAI GACNNNNGTC 2 cut(s) 1959, 3635
PshBI ATTAAT 4 cut(s) 3683, 4254, 6441, 8033
PsiI TTATAA 3 cut(s) 1020, 5586, 10709
Psp124BI GAGCTC 4 cut(s) 2808, 11457, 12399, 12739
Psp1406I AACGTT 2 cut(s) 515, 12618
Psp5II RGGWCCY 3 cut(s) 2281, 6420, 10423
PspCI CACGTG 1 cut(s) 10855
PspEI GGTNACC 1 cut(s) 11342
PspFI CCCAGC 6 cut(s) 2308, 3075, 3616, 8625, 8715, 9796
PspPPI RGGWCCY 3 cut(s) 2281, 6420, 10423
PsrI GAACNNNNNNTAC 4 cut(s) 4266, 4298, 11401, 11433
PstI CTGCAG 8 cut(s) 1825, 1831, 2073, 5663, 7195, 10668, 12628, 13008
PstNI CAGNNNCTG 2 cut(s) 90, 2786
PvuII CAGCTG 4 cut(s) 1826, 3533, 4607, 9296
SacI GAGCTC 4 cut(s) 2808, 11457, 12399, 12739
SalI GTCGAC 3 cut(s) 3221, 3441, 8003
SapI GCTCTTC 8 cut(s) 3529, 6271, 6774, 9558, 11943, 12072, 12843, 12927
ScaI AGTACT 4 cut(s) 8467, 8542, 8884, 9148
SexAI ACCWGGT 1 cut(s) 12675
SfuI TTCGAA 1 cut(s) 11741
SnaBI TACGTA 2 cut(s) 1097, 8459
SpeI ACTAGT 1 cut(s) 4088
SphI GCATGC 2 cut(s) 9581, 9925
SseBI AGGCCT 1 cut(s) 7714
SspI AATATT 8 cut(s) 454, 5259, 5771, 7989, 8437, 9302, 9981, 11038
SstI GAGCTC 4 cut(s) 2808, 11457, 12399, 12739
StuI AGGCCT 1 cut(s) 7714
TaqII GACCGA 1 cut(s) 4987
TauI GCSGC 3 cut(s) 1931, 3082, 8344
Van91I CCANNNNNTGG 4 cut(s) 1002, 7373, 8625, 11687
Vha464I CTTAAG 3 cut(s) 197, 8827, 9505
VneI GTGCAC 3 cut(s) 579, 4488, 7920
VspI ATTAAT 4 cut(s) 3683, 4254, 6441, 8033
XagI CCTNNNNNAGG 1 cut(s) 3180
XbaI TCTAGA 2 cut(s) 5483, 10387
XcmI CCANNNNNNNNNTGG 5 cut(s) 1909, 7741, 8718, 9435, 12720
XmiI GTMKAC 9 cut(s) 3222, 3274, 3442, 5153, 5442, 8004, 9190, 10098, 11818
XmnI GAANNNNTTC 3 cut(s) 7186, 12149, 12921
ZrmI AGTACT 4 cut(s) 8467, 8542, 8884, 9148
Zsp2I ATGCAT 5 cut(s) 2740, 4699, 6953, 10929, 11263
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.