Vacuolar protein sorting-associated protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G17140 AT4G17140 AT4G17140 |
| fragaria_vesca | FvH4_5g20820 FvH4_5g20820 FvH4_5g20820 FvH4_5g20820 FvH4_5g20820 FvH4_5g20820 FvH4_5g20820 FvH4_5g20820 |
| malus_domestica | MD04G1057200.v1.1 MD06G1043800.v1.1 |
| prunus_persica | Prupe.5G050700_v2.0.a1 Prupe.5G050700_v2.0.a1 Prupe.5G050700_v2.0.a1 Prupe.5G050700_v2.0.a1 |
| pyrus_communis | pycom04g05080 pycom06g03680 pycom06g03700 |
| rosa_chinensis | RchiOBHm_Chr7g0207821 |
| rosa_laevigata | RLG00000003286 |
| rosa_multiflora | Rmu_sc0004647.1_g000014 Rmu_sc0010112.1_g000001 |
| rosa_roxburghii | Rroxscaffold_3G00251130 Rroxscaffold_3G00251140 |
| rosa_rugosa | Rorug07G0099700 |
| rosa_samantha | Rh7AG232900 Rh7BG228200 Rh7CG246900 Rh7DG238900 |
| rosa_wichuraiana | Rw7G019940 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 917 |
| AasI | GACNNNNNNGTC | 3 cut(s) | 1830, 2766, 2780 |
| Acc36I | ACCTGC | 4 cut(s) | 879, 1029, 2306, 2713 |
| AccB1I | GGYRCC | 1 cut(s) | 896 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1895 |
| AccI | GTMKAC | 4 cut(s) | 666, 1197, 1362, 2026 |
| AccII | CGCG | 1 cut(s) | 1557 |
| AciI | CCGC | 8 cut(s) | 71, 493, 858, 1455, 1522, 1555, 2182, 3118 |
| AclI | AACGTT | 1 cut(s) | 2826 |
| AclWI | GGATC | 8 cut(s) | 97, 508, 1284, 1331, 1567, 2335, 2450, 3191 |
| AcoI | YGGCCR | 1 cut(s) | 640 |
| AcsI | RAATTY | 5 cut(s) | 450, 616, 828, 2374, 3050 |
| AcuI | CTGAAG | 4 cut(s) | 320, 2204, 2568, 3063 |
| AdeI | CACNNNGTG | 2 cut(s) | 2712, 3139 |
| AfaI | GTAC | 3 cut(s) | 427, 1283, 2107 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 1895 |
| AflIII | ACRYGT | 1 cut(s) | 2527 |
| AhlI | ACTAGT | 1 cut(s) | 1843 |
| AjiI | CACGTC | 1 cut(s) | 1862 |
| AjnI | CCWGG | 5 cut(s) | 1191, 1869, 2430, 2540, 2965 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 255, 287 |
| Alw21I | GWGCWC | 4 cut(s) | 1665, 2607, 2947, 3231 |
| Alw26I | GTCTC | 9 cut(s) | 345, 840, 976, 1408, 1543, 1560, 2752, 2788, 3038 |
| AlwI | GGATC | 8 cut(s) | 97, 508, 1284, 1331, 1567, 2335, 2450, 3191 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 3005 |
| Ama87I | CYCGRG | 1 cut(s) | 2004 |
| AoxI | GGCC | 3 cut(s) | 7, 640, 1057 |
| ApeKI | GCWGC | 5 cut(s) | 133, 252, 1066, 2811, 2831 |
| ApoI | RAATTY | 5 cut(s) | 450, 616, 828, 2374, 3050 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2843, 2875 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 828, 3129 |
| AspS9I | GGNCC | 7 cut(s) | 7, 50, 323, 512, 631, 860, 1057 |
| AsuC2I | CCSGG | 4 cut(s) | 1217, 2005, 2006, 2384 |
| AsuII | TTCGAA | 1 cut(s) | 1949 |
| AvaI | CYCGRG | 1 cut(s) | 2004 |
| AvaII | GGWCC | 5 cut(s) | 50, 323, 512, 631, 860 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 2907, 2940 |
| BalI | TGGCCA | 1 cut(s) | 642 |
| BanI | GGYRCC | 1 cut(s) | 896 |
| BanII | GRGCYC | 4 cut(s) | 1445, 1665, 2607, 2947 |
| BbsI | GAAGAC | 3 cut(s) | 449, 988, 1957 |
| Bbv12I | GWGCWC | 4 cut(s) | 1665, 2607, 2947, 3231 |
| BbvCI | CCTCAGC | 2 cut(s) | 3039, 3201 |
| BbvI | GCAGC | 5 cut(s) | 145, 264, 1078, 2818, 2823 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1929, 1963 |
| BciT130I | CCWGG | 5 cut(s) | 1193, 1871, 2432, 2542, 2967 |
| BciVI | GTATCC | 1 cut(s) | 2870 |
| BclI | TGATCA | 1 cut(s) | 25 |
| BcnI | CCSGG | 4 cut(s) | 1217, 2005, 2006, 2384 |
| BcoDI | GTCTC | 9 cut(s) | 345, 840, 976, 1408, 1543, 1560, 2752, 2788, 3038 |
| BcuI | ACTAGT | 1 cut(s) | 1843 |
| BfaI | CTAG | 9 cut(s) | 737, 1320, 1394, 1430, 1844, 1958, 2592, 2940, 3232 |
| BfmI | CTRYAG | 5 cut(s) | 804, 872, 1292, 2451, 2832 |
| BfuAI | ACCTGC | 4 cut(s) | 879, 1029, 2306, 2713 |
| BfuI | GTATCC | 1 cut(s) | 2870 |
| BglII | AGATCT | 1 cut(s) | 61 |
| BisI | GCNGC | 5 cut(s) | 134, 253, 1067, 2812, 2832 |
| BlpI | GCTNAGC | 1 cut(s) | 1659 |
| BlsI | GCNGC | 5 cut(s) | 135, 254, 1068, 2813, 2833 |
| Bme1390I | CCNGG | 9 cut(s) | 1193, 1217, 1871, 2005, 2006, 2384, 2432, 2542, 2967 |
| Bme18I | GGWCC | 5 cut(s) | 50, 323, 512, 631, 860 |
| BmeT110I | CYCGRG | 1 cut(s) | 2004 |
| BmgBI | CACGTC | 1 cut(s) | 1862 |
| BmgT120I | GGNCC | 7 cut(s) | 7, 50, 323, 512, 631, 860, 1057 |
| BmiI | GGNNCC | 9 cut(s) | 591, 633, 898, 1113, 1442, 2124, 2232, 2427, 2511 |
| BmrFI | CCNGG | 9 cut(s) | 1193, 1217, 1871, 2005, 2006, 2384, 2432, 2542, 2967 |
| BmrI | ACTGGG | 1 cut(s) | 1064 |
| BmuI | ACTGGG | 1 cut(s) | 1064 |
| BpiI | GAAGAC | 3 cut(s) | 449, 988, 1957 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1109, 1141 |
| BpmI | CTGGAG | 4 cut(s) | 705, 1812, 2217, 2931 |
| Bpu10I | CCTNAGC | 4 cut(s) | 660, 1116, 3039, 3201 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1659 |
| Bpu14I | TTCGAA | 1 cut(s) | 1949 |
| BpuMI | CCSGG | 4 cut(s) | 1217, 2005, 2006, 2384 |
| Bsa29I | ATCGAT | 1 cut(s) | 2927 |
| BsaBI | GATNNNNATC | 3 cut(s) | 1134, 2959, 3087 |
| BsaI | GGTCTC | 4 cut(s) | 840, 976, 1408, 2752 |
| BsaJI | CCNNGG | 8 cut(s) | 496, 1870, 2003, 2004, 2279, 2430, 2553, 3092 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 1866, 1896, 1898, 1928, 2884, 2914 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 1895 |
| Bse8I | GATNNNNATC | 3 cut(s) | 1134, 2959, 3087 |
| BseBI | CCWGG | 5 cut(s) | 1193, 1871, 2432, 2542, 2967 |
| BseCI | ATCGAT | 1 cut(s) | 2927 |
| BseDI | CCNNGG | 8 cut(s) | 496, 1870, 2003, 2004, 2279, 2430, 2553, 3092 |
| BseJI | GATNNNNATC | 3 cut(s) | 1134, 2959, 3087 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 1895 |
| BseRI | GAGGAG | 2 cut(s) | 1507, 3056 |
| BseXI | GCAGC | 5 cut(s) | 145, 264, 1078, 2818, 2823 |
| BseYI | CCCAGC | 2 cut(s) | 4, 2738 |
| BsgI | GTGCAG | 2 cut(s) | 1085, 2416 |
| Bsh1236I | CGCG | 1 cut(s) | 1557 |
| BshFI | GGCC | 3 cut(s) | 9, 642, 1059 |
| BshNI | GGYRCC | 1 cut(s) | 896 |
| BshVI | ATCGAT | 1 cut(s) | 2927 |
| BsiHKAI | GWGCWC | 4 cut(s) | 1665, 2607, 2947, 3231 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2004 |
| BsiSI | CCGG | 3 cut(s) | 1216, 2005, 2383 |
| BslFI | GGGAC | 1 cut(s) | 2754 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 1895 |
| BsmAI | GTCTC | 9 cut(s) | 345, 840, 976, 1408, 1543, 1560, 2752, 2788, 3038 |
| BsmFI | GGGAC | 1 cut(s) | 2754 |
| BsmI | GAATGC | 3 cut(s) | 555, 1469, 1865 |
| BsnI | GGCC | 3 cut(s) | 9, 642, 1059 |
| Bso31I | GGTCTC | 4 cut(s) | 840, 976, 1408, 2752 |
| BsoBI | CYCGRG | 1 cut(s) | 2004 |
| Bsp119I | TTCGAA | 1 cut(s) | 1949 |
| Bsp1286I | GDGCHC | 5 cut(s) | 1445, 1665, 2607, 2947, 3231 |
| Bsp1407I | TGTACA | 1 cut(s) | 1281 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1659 |
| Bsp19I | CCATGG | 1 cut(s) | 3092 |
| BspACI | CCGC | 8 cut(s) | 71, 493, 858, 1455, 1522, 1555, 2182, 3118 |
| BspANI | GGCC | 3 cut(s) | 9, 642, 1059 |
| BspDI | ATCGAT | 1 cut(s) | 2927 |
| BspFNI | CGCG | 1 cut(s) | 1557 |
| BspLI | GGNNCC | 9 cut(s) | 591, 633, 898, 1113, 1442, 2124, 2232, 2427, 2511 |
| BspMAI | CTGCAG | 2 cut(s) | 876, 2836 |
| BspMI | ACCTGC | 4 cut(s) | 879, 1029, 2306, 2713 |
| BspPI | GGATC | 8 cut(s) | 97, 508, 1284, 1331, 1567, 2335, 2450, 3191 |
| BspQI | GCTCTTC | 3 cut(s) | 2280, 3051, 3135 |
| BspT104I | TTCGAA | 1 cut(s) | 1949 |
| BspT107I | GGYRCC | 1 cut(s) | 896 |
| BspTNI | GGTCTC | 4 cut(s) | 840, 976, 1408, 2752 |
| BsrGI | TGTACA | 1 cut(s) | 1281 |
| BssECI | CCNNGG | 8 cut(s) | 496, 1870, 2003, 2004, 2279, 2430, 2553, 3092 |
| BssNAI | GTATAC | 1 cut(s) | 2027 |
| BssT1I | CCWWGG | 3 cut(s) | 496, 2279, 3092 |
| Bst1107I | GTATAC | 1 cut(s) | 2027 |
| Bst2UI | CCWGG | 5 cut(s) | 1193, 1871, 2432, 2542, 2967 |
| Bst4CI | ACNGT | 8 cut(s) | 538, 1296, 1695, 1924, 2256, 2618, 2843, 3020 |
| Bst6I | CTCTTC | 4 cut(s) | 2151, 2280, 3051, 3135 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 2015, 2712 |
| BstAUI | TGTACA | 1 cut(s) | 1281 |
| BstBI | TTCGAA | 1 cut(s) | 1949 |
| BstC8I | GCNNGC | 1 cut(s) | 131 |
| BstDSI | CCRYGG | 1 cut(s) | 3092 |
| BstEII | GGTNACC | 1 cut(s) | 1550 |
| BstFNI | CGCG | 1 cut(s) | 1557 |
| BstMAI | GTCTC | 9 cut(s) | 345, 840, 976, 1408, 1543, 1560, 2752, 2788, 3038 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 2015, 2179, 2602, 2712, 3211 |
| BstNI | CCWGG | 5 cut(s) | 1193, 1871, 2432, 2542, 2967 |
| BstNSI | RCATGY | 3 cut(s) | 133, 2531, 3102 |
| BstPI | GGTNACC | 1 cut(s) | 1550 |
| BstSCI | CCNGG | 9 cut(s) | 1191, 1215, 1869, 2003, 2004, 2382, 2430, 2540, 2965 |
| BstSFI | CTRYAG | 5 cut(s) | 804, 872, 1292, 2451, 2832 |
| BstUI | CGCG | 1 cut(s) | 1557 |
| BstV1I | GCAGC | 5 cut(s) | 145, 264, 1078, 2818, 2823 |
| BstV2I | GAAGAC | 3 cut(s) | 449, 988, 1957 |
| BstX2I | RGATCY | 3 cut(s) | 61, 1276, 2442 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1263 |
| BstYI | RGATCY | 3 cut(s) | 61, 1276, 2442 |
| BstZ17I | GTATAC | 1 cut(s) | 2027 |
| Bsu15I | ATCGAT | 1 cut(s) | 2927 |
| BsuI | GTATCC | 1 cut(s) | 2870 |
| BsuRI | GGCC | 3 cut(s) | 9, 642, 1059 |
| BsuTUI | ATCGAT | 1 cut(s) | 2927 |
| BtgI | CCRYGG | 1 cut(s) | 3092 |
| BtrI | CACGTC | 1 cut(s) | 1862 |
| BtsI | GCAGTG | 5 cut(s) | 2304, 2404, 2592, 2686, 3127 |
| BveI | ACCTGC | 4 cut(s) | 879, 1029, 2306, 2713 |
| Cac8I | GCNNGC | 1 cut(s) | 131 |
| CaiI | CAGNNNCTG | 1 cut(s) | 3005 |
| Cfr13I | GGNCC | 7 cut(s) | 7, 50, 323, 512, 631, 860, 1057 |
| Cfr9I | CCCGGG | 1 cut(s) | 2004 |
| ClaI | ATCGAT | 1 cut(s) | 2927 |
| Csp6I | GTAC | 3 cut(s) | 426, 1282, 2106 |
| CviQI | GTAC | 3 cut(s) | 426, 1282, 2106 |
| DraIII | CACNNNGTG | 2 cut(s) | 2712, 3139 |
| DrdI | GACNNNNNNGTC | 3 cut(s) | 1830, 2766, 2780 |
| DseDI | GACNNNNNNGTC | 3 cut(s) | 1830, 2766, 2780 |
| EaeI | YGGCCR | 1 cut(s) | 640 |
| Eam1104I | CTCTTC | 4 cut(s) | 2151, 2280, 3051, 3135 |
| EarI | CTCTTC | 4 cut(s) | 2151, 2280, 3051, 3135 |
| EciI | GGCGGA | 1 cut(s) | 482 |
| Ecl136II | GAGCTC | 3 cut(s) | 1663, 2605, 2945 |
| Eco130I | CCWWGG | 3 cut(s) | 496, 2279, 3092 |
| Eco24I | GRGCYC | 4 cut(s) | 1445, 1665, 2607, 2947 |
| Eco31I | GGTCTC | 4 cut(s) | 840, 976, 1408, 2752 |
| Eco32I | GATATC | 1 cut(s) | 772 |
| Eco47I | GGWCC | 5 cut(s) | 50, 323, 512, 631, 860 |
| Eco53kI | GAGCTC | 3 cut(s) | 1663, 2605, 2945 |
| Eco57I | CTGAAG | 4 cut(s) | 320, 2204, 2568, 3063 |
| Eco88I | CYCGRG | 1 cut(s) | 2004 |
| Eco91I | GGTNACC | 1 cut(s) | 1550 |
| EcoICRI | GAGCTC | 3 cut(s) | 1663, 2605, 2945 |
| EcoO109I | RGGNCCY | 1 cut(s) | 631 |
| EcoO65I | GGTNACC | 1 cut(s) | 1550 |
| EcoRII | CCWGG | 5 cut(s) | 1191, 1869, 2430, 2540, 2965 |
| EcoRV | GATATC | 1 cut(s) | 772 |
| EcoT14I | CCWWGG | 3 cut(s) | 496, 2279, 3092 |
| EcoT22I | ATGCAT | 3 cut(s) | 1137, 1471, 2975 |
| EcoT38I | GRGCYC | 4 cut(s) | 1445, 1665, 2607, 2947 |
| ErhI | CCWWGG | 3 cut(s) | 496, 2279, 3092 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1615, 1647 |
| FaqI | GGGAC | 1 cut(s) | 2754 |
| FauNDI | CATATG | 2 cut(s) | 637, 719 |
| FbaI | TGATCA | 1 cut(s) | 25 |
| FblI | GTMKAC | 4 cut(s) | 666, 1197, 1362, 2026 |
| Fnu4HI | GCNGC | 5 cut(s) | 134, 253, 1067, 2812, 2832 |
| FriOI | GRGCYC | 4 cut(s) | 1445, 1665, 2607, 2947 |
| Fsp4HI | GCNGC | 5 cut(s) | 134, 253, 1067, 2812, 2832 |
| FspBI | CTAG | 9 cut(s) | 737, 1320, 1394, 1430, 1844, 1958, 2592, 2940, 3232 |
| GluI | GCNGC | 5 cut(s) | 134, 253, 1067, 2812, 2832 |
| GsaI | CCCAGC | 2 cut(s) | 8, 2742 |
| GsuI | CTGGAG | 4 cut(s) | 705, 1812, 2217, 2931 |
| HaeIII | GGCC | 3 cut(s) | 9, 642, 1059 |
| HapII | CCGG | 3 cut(s) | 1216, 2005, 2383 |
| HincII | GTYRAC | 1 cut(s) | 667 |
| HindII | GTYRAC | 1 cut(s) | 667 |
| HpaII | CCGG | 3 cut(s) | 1216, 2005, 2383 |
| Hpy99I | CGWCG | 1 cut(s) | 2777 |
| HpyAV | CCTTC | 7 cut(s) | 113, 220, 284, 461, 873, 2415, 2500 |
| HpyCH4III | ACNGT | 8 cut(s) | 538, 1296, 1695, 1924, 2256, 2618, 2843, 3020 |
| HpyCH4IV | ACGT | 3 cut(s) | 475, 1861, 2826 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 2015, 2179, 2602, 2712, 3211 |
| HpySE526I | ACGT | 3 cut(s) | 475, 1861, 2826 |
| Ksp22I | TGATCA | 1 cut(s) | 25 |
| LguI | GCTCTTC | 3 cut(s) | 2280, 3051, 3135 |
| LmnI | GCTCC | 8 cut(s) | 1086, 1117, 1440, 1937, 2236, 2610, 2676, 2950 |
| Lsp1109I | GCAGC | 5 cut(s) | 145, 264, 1078, 2818, 2823 |
| MaeI | CTAG | 9 cut(s) | 737, 1320, 1394, 1430, 1844, 1958, 2592, 2940, 3232 |
| MaeII | ACGT | 3 cut(s) | 475, 1861, 2826 |
| MfeI | CAATTG | 1 cut(s) | 124 |
| MflI | RGATCY | 3 cut(s) | 61, 1276, 2442 |
| MhlI | GDGCHC | 5 cut(s) | 1445, 1665, 2607, 2947, 3231 |
| MlsI | TGGCCA | 1 cut(s) | 642 |
| MluNI | TGGCCA | 1 cut(s) | 642 |
| MlyI | GAGTC | 1 cut(s) | 1002 |
| MmeI | TCCRAC | 5 cut(s) | 220, 1214, 1441, 2038, 2854 |
| Mox20I | TGGCCA | 1 cut(s) | 642 |
| Mph1103I | ATGCAT | 3 cut(s) | 1137, 1471, 2975 |
| MroXI | GAANNNNTTC | 2 cut(s) | 828, 3129 |
| MscI | TGGCCA | 1 cut(s) | 642 |
| MseI | TTAA | 6 cut(s) | 57, 410, 1044, 1242, 2646, 3146 |
| MslI | CAYNNNNRTG | 3 cut(s) | 485, 2978, 3097 |
| Msp20I | TGGCCA | 1 cut(s) | 642 |
| MspA1I | CMGCKG | 2 cut(s) | 1069, 2182 |
| MspI | CCGG | 3 cut(s) | 1216, 2005, 2383 |
| MspR9I | CCNGG | 9 cut(s) | 1193, 1217, 1871, 2005, 2006, 2384, 2432, 2542, 2967 |
| MunI | CAATTG | 1 cut(s) | 124 |
| Mva1269I | GAATGC | 3 cut(s) | 555, 1469, 1865 |
| MvaI | CCWGG | 5 cut(s) | 1193, 1871, 2432, 2542, 2967 |
| MvnI | CGCG | 1 cut(s) | 1557 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 2015, 2179, 2602, 2712, 3211 |
| NciI | CCSGG | 4 cut(s) | 1217, 2005, 2006, 2384 |
| NcoI | CCATGG | 1 cut(s) | 3092 |
| NdeI | CATATG | 2 cut(s) | 637, 719 |
| NlaIV | GGNNCC | 9 cut(s) | 591, 633, 898, 1113, 1442, 2124, 2232, 2427, 2511 |
| NmeAIII | GCCGAG | 1 cut(s) | 2578 |
| NmuCI | GTSAC | 9 cut(s) | 77, 791, 1219, 1324, 1389, 2194, 2318, 2587, 3101 |
| NsiI | ATGCAT | 3 cut(s) | 1137, 1471, 2975 |
| NspI | RCATGY | 3 cut(s) | 133, 2531, 3102 |
| NspV | TTCGAA | 1 cut(s) | 1949 |
| PaeI | GCATGC | 1 cut(s) | 133 |
| PciI | ACATGT | 1 cut(s) | 2527 |
| PciSI | GCTCTTC | 3 cut(s) | 2280, 3051, 3135 |
| PctI | GAATGC | 3 cut(s) | 555, 1469, 1865 |
| PdmI | GAANNNNTTC | 2 cut(s) | 828, 3129 |
| PflFI | GACNNNGTC | 1 cut(s) | 225 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1895 |
| PfoI | TCCNGGA | 1 cut(s) | 2965 |
| PkrI | GCNGC | 5 cut(s) | 135, 254, 1068, 2813, 2833 |
| PleI | GAGTC | 1 cut(s) | 1001 |
| PpsI | GAGTC | 1 cut(s) | 1001 |
| PpuMI | RGGWCCY | 1 cut(s) | 631 |
| PscI | ACATGT | 1 cut(s) | 2527 |
| PsiI | TTATAA | 1 cut(s) | 917 |
| Psp124BI | GAGCTC | 3 cut(s) | 1665, 2607, 2947 |
| Psp1406I | AACGTT | 1 cut(s) | 2826 |
| Psp5II | RGGWCCY | 1 cut(s) | 631 |
| Psp6I | CCWGG | 5 cut(s) | 1191, 1869, 2430, 2540, 2965 |
| PspEI | GGTNACC | 1 cut(s) | 1550 |
| PspFI | CCCAGC | 2 cut(s) | 4, 2738 |
| PspGI | CCWGG | 5 cut(s) | 1191, 1869, 2430, 2540, 2965 |
| PspN4I | GGNNCC | 9 cut(s) | 591, 633, 898, 1113, 1442, 2124, 2232, 2427, 2511 |
| PspPI | GGNCC | 7 cut(s) | 7, 50, 323, 512, 631, 860, 1057 |
| PspPPI | RGGWCCY | 1 cut(s) | 631 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1609, 1641 |
| PstI | CTGCAG | 2 cut(s) | 876, 2836 |
| PstNI | CAGNNNCTG | 1 cut(s) | 3005 |
| PsuI | RGATCY | 3 cut(s) | 61, 1276, 2442 |
| PsyI | GACNNNGTC | 1 cut(s) | 225 |
| PvuII | CAGCTG | 1 cut(s) | 1069 |
| RsaI | GTAC | 3 cut(s) | 427, 1283, 2107 |
| RsaNI | GTAC | 3 cut(s) | 426, 1282, 2106 |
| RseI | CAYNNNNRTG | 3 cut(s) | 485, 2978, 3097 |
| SacI | GAGCTC | 3 cut(s) | 1665, 2607, 2947 |
| SalI | GTCGAC | 1 cut(s) | 665 |
| SapI | GCTCTTC | 3 cut(s) | 2280, 3051, 3135 |
| SaqAI | TTAA | 6 cut(s) | 57, 410, 1044, 1242, 2646, 3146 |
| SatI | GCNGC | 5 cut(s) | 134, 253, 1067, 2812, 2832 |
| Sau96I | GGNCC | 7 cut(s) | 7, 50, 323, 512, 631, 860, 1057 |
| SchI | GAGTC | 1 cut(s) | 1002 |
| ScrFI | CCNGG | 9 cut(s) | 1193, 1217, 1871, 2005, 2006, 2384, 2432, 2542, 2967 |
| SduI | GDGCHC | 5 cut(s) | 1445, 1665, 2607, 2947, 3231 |
| SfcI | CTRYAG | 5 cut(s) | 804, 872, 1292, 2451, 2832 |
| SfuI | TTCGAA | 1 cut(s) | 1949 |
| SinI | GGWCC | 5 cut(s) | 50, 323, 512, 631, 860 |
| SmaI | CCCGGG | 1 cut(s) | 2006 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 485, 2978, 3097 |
| SpeI | ACTAGT | 1 cut(s) | 1843 |
| SphI | GCATGC | 1 cut(s) | 133 |
| SsiI | CCGC | 8 cut(s) | 71, 493, 858, 1455, 1522, 1555, 2182, 3118 |
| SspI | AATATT | 2 cut(s) | 1246, 2115 |
| SspMI | CTAG | 9 cut(s) | 737, 1320, 1394, 1430, 1844, 1958, 2592, 2940, 3232 |
| SstI | GAGCTC | 3 cut(s) | 1665, 2607, 2947 |
| StyD4I | CCNGG | 9 cut(s) | 1191, 1215, 1869, 2003, 2004, 2382, 2430, 2540, 2965 |
| StyI | CCWWGG | 3 cut(s) | 496, 2279, 3092 |
| TaaI | ACNGT | 8 cut(s) | 538, 1296, 1695, 1924, 2256, 2618, 2843, 3020 |
| TaiI | ACGT | 3 cut(s) | 478, 1864, 2829 |
| TaqI | TCGA | 8 cut(s) | 20, 343, 525, 666, 1010, 1949, 2701, 2927 |
| TaqII | GACCGA | 1 cut(s) | 822 |
| TatI | WGTACW | 2 cut(s) | 1281, 2105 |
| Tru1I | TTAA | 6 cut(s) | 57, 410, 1044, 1242, 2646, 3146 |
| Tru9I | TTAA | 6 cut(s) | 57, 410, 1044, 1242, 2646, 3146 |
| TseFI | GTSAC | 9 cut(s) | 77, 791, 1219, 1324, 1389, 2194, 2318, 2587, 3101 |
| TseI | GCWGC | 5 cut(s) | 133, 252, 1066, 2811, 2831 |
| Tsp45I | GTSAC | 9 cut(s) | 77, 791, 1219, 1324, 1389, 2194, 2318, 2587, 3101 |
| TspGWI | ACGGA | 2 cut(s) | 2003, 2967 |
| TspMI | CCCGGG | 1 cut(s) | 2004 |
| Tth111I | GACNNNGTC | 1 cut(s) | 225 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1895 |
| VpaK11BI | GGWCC | 5 cut(s) | 50, 323, 512, 631, 860 |
| XapI | RAATTY | 5 cut(s) | 450, 616, 828, 2374, 3050 |
| XceI | RCATGY | 3 cut(s) | 133, 2531, 3102 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 569, 2928 |
| XmaI | CCCGGG | 1 cut(s) | 2004 |
| XmiI | GTMKAC | 4 cut(s) | 666, 1197, 1362, 2026 |
| XmnI | GAANNNNTTC | 2 cut(s) | 828, 3129 |
| XspI | CTAG | 9 cut(s) | 737, 1320, 1394, 1430, 1844, 1958, 2592, 2940, 3232 |
| Zsp2I | ATGCAT | 3 cut(s) | 1137, 1471, 2975 |