RchiOBHm_Chr7g0207821

Vacuolar protein sorting-associated protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
OG0004352
Physical Location & Seq
Reverse (-)
25032802 .. 25070108
37307 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ18598

Sequence Viewer

Length: 13014 bp
ATGTTGGAGGATCAGGTGGCGAACCTCTTGCAGAGGTACCTGGGGAACTACGTGAAGGGACTCAATAAAGAGGCCCTCAAGATCAGTGTCTGGCAAGGTGATGTGGAGCTAACAAATATGCAGTTGAAGCCAGAGGCACTGAATGCCTTAAAACTACCTGTGAAGGTCAAGGCAGGATTTCTTGGATCAGTGAAACTTAAGGTTCCATGGAGCAGGCTTGGCCAGGATCCAGTGTTAGTTTCTTTGGATCGCATTTTTCTATTAGCTGAGCCTGAAACGCAAGTTGAGGGAAGTAGTGAGGATGCTGTACAGGAAACTAAGAAAAACCGAGTGCAGGAAATGGAAATGAAGTTGTTGGAGAAGGCGCAACAACTGAAGTCAGATGTGAATAAATCATGGTTGGGATCCCTGATCAGCACAATAATTGGAAATTTGAAACTTTCAATTTCAAATATTCACATCAGATACGAGGATCTTGAGAGCAATATTGGTCATCCGTTTGCAGCGGGCATAACCTTGGAGAGACTTTCAGCCATGACAGTTGATGATACTGGAAAAGAGACATTTGTTACTGGGGGTGCACTGAACTGTATTCAGAAGTCTGTCGAACTTGATCGGCTTGCACTATATCTGGATTCTGATATTGCTCCATGGCATGTTAACAAGCAATGGGAGGATTTGCTTCCATCAGAGTGGGTCCAGGTTTTTAAATTTGGTACTAAAGATGGTAAACCAGCGAATAAATCGACCAAGAAGCATACTTATGTATTGGAACCTGTTTCTGGAAGTGCTAAGTATTCAAAGCTACGACAAAATGAATTTGCTGATAGTGGTCGGCCTTTACATAAAGCAGCAGTTAATCTGGATGATGTGACTATCTGTTTGCCAAAGGACGGATACAGGGATGTACTGAAGTTAGCTGATAACTTTGCTGCCTTCAATCAGCGGTTGAAGTATGCTCATTATCGTCCACATGTCTCCGTAAAATCTGATCCTAGATCTTGGTGGAAGTATGCTTACAGAGTTGTTTCTGACCAAATGAAGAAGGCAAGTGGGAAACTGTCATGGGAGCAAGTTCTGAAGTATGCAAGATTACGTAAAAGATATATATCTCTATATGCTTCGCTGCTTAGATCTGACCCTAGTCGGGCAGTGGTTGAAGATAACAAAGACATTGAAGAACTAGATCGTGAACTTGATATTGAACTTATACTGCAGTGGAGGATGTTGGCTCACAAGTTTGTAGAGCAGTCATTAGAGTCAGAACATGACTCGAGGAAACAAAAAGCAAAGAAATCTTGGTGGTCTGGATGGGGCAGTCAGTCTCTGAAAGATGAGAATGAGCCATTTAGTTTCACTGATGAAGACTGGAAGCAGTTAAATGAAATCATCGGTTATAAGGAAAGTGATGATAGACTGTTGGTTACAGTTGATGAAAAGATGGATGCTCTTCAGACTTCCTTGATCATTTCTATGAAACGTAATGCCACTAAGCTTATTGATGAGTCTCAGGAGTGTCTTGCTGAATTATCGTGTGAAGGCATCGGTTGCTCAATAAAGCTCTATCCAGAAACAAAAGTTTTTGACCTGAACTTGGGATCATATAAGTTATCAACGCCAAACGGTCTCCTTGCTGAGAGTGCAAGTGCTTATGATTCTTTAGTTGGCGTGTTCTGTTTCAAGCCTTTTGACACCAAGGTGGACTGGAGCTTTGTTGCTAAGGCTTCTCCCTGTTATGTGACTTATCTAAAGGATGCAATTGATCAAATTATAAAGTTTTTTCGGAGTAATACAGTTAGTCAGAAGATAGCTATGGATACTGCAGCTGCAGTGCAGATGACAATCGATGGAGTCAAGCGCACAGCTCAGCAACAAGTGAACCGGGCATTGAAGGACCATTCCAGGTTTTTGTTGGACTTGGATATCGCGGCTCCTAAGATTACCATTCCTACTGACTTTTGTCCCGACAATATTCATCCAACAAAACTGATGCTGGACTTGGGAAATTTGGTTATTGGTACCAAGGATGACTATGAGCATGGATCATTGAAGGAGCAAGATATGTATCTGCAGTTTAATTTGGTTCTAAGTGATGTATCTGCGTTTTTGGTTGATGGTGACTACTGTTGGGGCAAATCTCCTGCAAAAAATTCTGCTGGTTCTTCCAACTCAGATGGTGTTAGTTTGTTGCCTTTTATTGATAAGTGTGGGGTAATTCTAACGTTTCAACAGATTAGATTAGAGAGTCCATCCTATCCTGCAACACGACTAGCTGTACGGGTGCCATCGTTGGGGTTTCACTTCTCCCCAGCTCGGTATCATCGATTGATGCAAGTAGTTAAGATCTTTAAGGAGGAGGATAGTGAGACGTCAGATCTCGTTGGCCCTTGGAATCAAGCTGACTTTGAGGGGTGGTCGGCTCTTCTTGTTTTCAAGGGTCTGGGAAATAGGGAAGCAGTGTGGCAGCGGCGCTACCTATGCTTAGTTGGCCCTTTCCTTTATATACTTGAGAGCCCTAGCTCAAAATCGTACAAGCAATGTATCAGCTTACAAGGGAAACACATATATGAGGTTCCCCCAGAGTCTGTTGGTGATACCGATCTTGTTTTGGCTGTCTGTGATTCTACACGAGCGAATAACAAGGTCGTGGAGGATGCAAATGCACTAATCTTGCTATTTGATTCTGATGATTCAAAGAAAACTTGGCAGAGCCGGTTGCGGGGGGCTGTCTATCATGCATCAGCGTCTGCTCCTGTAACTGGTCTATCCGATACTTCGTCAGAATCTGAGGATTCAGTAATGGAGCTTAATGGAAATCCTGATATGGGTGATTTATCAAAAATGGAGAAGATATTCATAACTGGTGTTCTTGATGAACTAAAGGTCTGCGTCAGTTATAGTTATCAGCGTGACCAAAATATCATGAAGGTGCTCCTAACTGAAGAAAGGCGCTTATTTGAACTTCGAGCGATAGGTGGTCAGGTTGAGGTATCAGTTAGATCGAGTGACATCTTTATTGGAACTGTTTTAAAATCTTTGGAGATTGAAGACTTGGTTTCTGGGCACACCCTCTCCCAGCCGCGTTATCTGGCAAGATCATTCATCCATAGTGCAGAAACACTTATAACCTCTGATGCCCCAGGAAATCAGAGTTTTGATGGTTCTGGTTCAATTCGTTTGGAAGGTGATGATAAATTCTATGAGGCAACAGATAATTTGGTCGACTCTGGAAATTTGATATTGAAATCTCCTAGTTTTACTCGTATTGCTGGTCTACTCCCAAGTGATGGAGTTCAAACAACAAACGACATTGCACTCGATGATTCAATGGATAGCTTTGTGAAAGCTCAAGTAGTTATCTATGACCAGAACTCTCCTCTGTATCATAATATGGATATGCAGGTCACAGTCACCCTGGCTACCTTATCATTTTTCTGTCGTCGACCAACAATTCTTGCAATAATGGAATTTGCAAATTCTATTACCATCAAGGATGAAAGCTGTGAAGCTTTCAGTGACAGTTCTTCAACAACAGCTACGAATCATGACACCAGAGATGATGCAGTTGATGGTTCGCAATCAATGGCAGTCAGCAAGCCTGCTGTTAAAGGATTGCTGGGAAAGGGGAAGTCCAGAGTTGTATTTAATATAACATTAAATATGGCCCGTGCTCAGATTTTATTAATGAATGAGGATGAAACTAAACTTGCTGTTCTGTCACAAGATAATTTACTTACGGATATTAAGGTATTTCCATCCTCTTTTAGTATTAAGGCATCCCTCGGAAATCTTAAGGTAAGTGATGAGAGTCTTCCAAGCAGCCATATGTATTTCTGGGCGTGCGATATGAGAAATCCAGGAGGCAGCTCATTTGTTGAGTTGGTTTTCACTTCATTTAGTGCCGATGATGAAGACTTTGAAGGTTATGAGTATAGCCTCTATGGTCAGCTCTCAGAAGTACGCATTGTATATTTGAATCGATTTATCCAGGAGATTGTTAGTTATTTCATGGGTCTTGTTCCCAAAAATTCAAAAGGAGTCGTGAAGCTAAAAGATCAAGTAACAAATTCAGAGAAGTGGTTTACAACTAGTGATTTTGAAGGATCACCTGCTATAAAGTTGGATCTGTCTCTGAGGAAGCCTATTATATTGATGCCCAGGAGAACGGACAGTCTTGACTACTTGAAGCTTGACATTGTTCATATTACTGTGAAGAGCACCTCTCAATGGTTTGGTGGAAGCAGAAGTGACATTAATGCTGTTCATATGGAAGTATTAACAGTTCAGGTTGAGGATATCAATTTGAATGTTGGTTGTAAAGGAGAAATAGGTGAAAGCATAATTCAAGATGTGAAGGGAGTATCTGTTGTGATTCAAAGGTCACTTAGAGACTTGATGCATCAAATACCAAATGTTGAGGTTCTAATCAAGATGGAGAAATTGAAGGCAGCTTTGTCAAACAGGGAATACCAGATTATTACCGATTGTGCTCAGTCTAATGTTTCTGAAACTCCACATACTGTGCCTCCATTGAACCTTGATTCTGTGACATCTTTAAGTGAGGGTGAAGCCATCACTCAGGATCCAAATGGTACTGCTTTTCCAATTGCAAGTGGGGAAGCCCGGGTCATGATGAAAGTTTGTGTCGTCATTGATTTGGTTGAATTGTGCTTACATACTGGTCTAGGGAGTCTTGCCACTGTGCAGGTTACTGGTGTATGGCTACTCTACAAGACAAATACCCTGGGGGAAGGTTTCCTGTCAGCAACACTCAAGGGTTTCACTGTTCTTGATGATCGTGACGGTACTAAAGAAGAGTTTAGGTTGGCGATAGGAAAGCCTGAGAATATTGGTTCTTGTTCCGTAGATTCTGTGACTTATGATGACACCCAGCACATCACTGATGGAAATGTCGGAAACTTGAATGATATCAATTTAGTTCCTACAATGCTCATTGTCGATGCCAAATTTTGCCAGCTTTTAACATCTGTTTCATTATGCATCCAAAGGCCACAACTTCTTGTTGCACTTGATTTTCTGCTGGCTGTTGCTGAGTTTTTTGTTCCAACAGTCACTGATGCGCTGTCAACTGAAGAAGTAAAGAACTCTGTTTATGGAATTGATGCAATAATTTTGAACCAGTCTACTTACAAGCAACCCTCCACTGAATTATCTCTCACTCCATTAAGACCTTTGGTAGTTGATGATGAAATATATGATCATTTTGTTTATGATGGTAATGGTGGAATATTGCATTTGAAAGATAGGCGGGGGTCCTATGTCTCTGGCCCTAGTACAGAGGCTATTATATACATAGGAGATGGGAAAAGATTGCAATTCAAAAATGTTGTTATCAAGAATGGGCTGTACTTAGATTCATGTATATCCATGGGAAGCAACAGTAGCTATTCAGCTTTAAAGGAAGATCAAGTCTACTTTGCGGGAGAGGATGAAGTTCCTAATTTGAGTTCCTCAAGAGAAAGTCCCAATAATCTGCCATCTCAAAGCATTGCAGTCAACAAATCAACGGAATTTATCATTGAGTTGCAGGTGGTTGGCCCAGAGCTGACATTTTATAATACATCCGAAAAACTTGGGGAATCACTGATGCTCTCTAACCAACTTTTACATGCTCAATTGGATGGATTCTGCAGGCTTGTTTTGAAAGGTGATACCATTGAGATGAATGCAAATGTGCTTGGTTTCACTATGGAGAGTAACGGAATAAGGATTTTGGAGCCTTTTGATACTTCTGTAAAATACTCTAATGCTTCTGGAAGGACCAATATACATATATCTGTTTCAGATATATTTATGAATTTTTCATTCAGCATCCTAAGGCTGTTTTTAGCAGTTGAAGAGGATATTTTGGCTTTTTTAAGCACGACCTCAAAGAAAATAACAGTAGTCTGCTCGCAGTTTGACAAGATTGGAACAATAGAAGATCCCTCCAGTGACCAAATATATGCCCTTTGGAGACCTCATGCACCTCCTGGTTTTGCAGTTCTTGGGGATTATCTGACACCATTGGACAAGCCACCTACAAAGGCAGTTGTTGCTGTAAATACCAATTTTTCCAGAGTGAAGAAGCCCCTATCTTACAAACTAATTTGGCCACCTTTACCTTCTGGGGAGTTGTCTCTTGATGGTGTAAATGATTTGGATGCAATACCAAGTGGTGTCCTTTCTGATGAAAGTAGCTGCTCCATTTGGTTTCCTGAAGCGCCTGCTGGATATGTTGCATTGGGCTGTGTGGTTTGTCCCGGAAGAGCACAACCACCATTATCTTCTGCTTTTTGTATCTCGGCTTCATTAGTTTCTCCTTGTTCCCTGAGGGACTGCATTGCAATTAACACCAACGATCCATATCAGTCAAGTTTAGCATTCTGGCGAGTGGATAATTCTGTTGGGACCTTTTTGCCGGCAGATCTTAGTACTTCTAGCATCACAGGTAGAGCGTATGATTTGCGTCACATCATATTTGGATTTCCTGAACCCTCTGCAAAATCATCCAATAGTTTGAATGCCCATACTTCTTCTCAAAGTCACAATCCGCAGTCAGAAAGATCAGCAACAGTAAACTCTGGTCGCCGGTATGAAGCTGTTGCTAGTTTTCGTTTGATATGGTGGAACCAAGGGTCAAATTCAAGAAAAAGGCTATCGATATGGCGTCCAGTTGTTCCTCCGGGAATGATATACTTTGGTGATATTGCAGTGAAAGGGTATGAACCTCCAAATACCTGCATTGTTCTTCATGATACTGAAGATGAAGAGCTTTTTAAAGCCCCTCTTGATTACCAAATTGTTGGGCAAATTAAAAAACAGAGGGGAATGGAGAGTGTGTCCTTTTGGCTTCCTCAAGCTCCCCCAGGGTTTGTTTCCCTTGGTTGTATTGCATGTAAGGGAACACCTAAGCAATCTGATTTCAGCTCATTAAGATGCATTCGCAGTGATTTGGTAACTGGGGATGAATTTTTAGAGGAGAGTATATGGGATACATCTGATGCCAAGCTTACGAAAGATTCATTCAGTGTATGGGCAGTTGGCAATGAGTTGAGTACCTTTCTAGTTCGTGGTGGTTTGAAGAAACCTCCTAGAAGGTTTGCTTTAAAACTGGCTGCTTCTAATGTACCAACTGGTTCAGATCTTACTGTAATAGATGCGGAAATTAGAACCTTTTCTGCAGCACTTTTTGATGACTATGGTGGCTTGATGGTTCCATTGTGTAATTTGTCTTTAAGTGGAATTGGGTTCGGTTTGCATGGAAGAACAGACTACTTGAATTCGACTGTGAGCTTCTCTTTGGCTGCTAGATCATATAATGATAAGTATGAAGTTTGGGAGCCTCTTGTTGAGCCGGTAGATGGATTCCTAAGATACCAATATGATCTCAATGCACCAAGTGCAACATCTCAGTTACGCGTTACATCGACTAGGGATCTGAACTTGAACGTTTCTGTGTCTAATGCTAATATGATAATTCAAGCTTATGCAAGCTGGAACAGTCTCGTTCATGTGCCTGAATATCATAAAAAAAGGGAAGCATTCTCTCCAACAGACGGTGAACGATCTGTTATTGACATCCATCACAGGAGAAACTACGATATAATCCCACAAAACAAGCTAGGTCAGGATATCTTTATTCGAGCTACTGAGTCAAGAGGACTTACAAGCATAATTAAGATGTCATCTGGAGATGTGAGGCCTGTAAAAGTTCCTGTTTCCAAGAATATGTTGGACTCTCATTTGAAAGGAAAACTTTTCCACAAAGTTAGAACAATGGTGACTTTCATCATAGTGGATGGGCAGTTCCCACGGGTTAGAGGGTTGACATCTCCCCATTATACCTTAGCAATCCGTCTCATTCCTGACCAGAGTCTCCCTAGTGAAACAGTGATTCACCAACAAAATGCGCGCACTTGCGGAAGCAGCTCGAATCACCTCTCTCCAGAGCTTGAGTTGGTCAAATGGAATGAAATATTTTTCTTTAAAGTTGACGCTCCAGACTACTACTCAGTTGAATTACTTGTGACGGACATGGGGAAAGGGGTCCCTCTTGGATTCTTTTCAGCCCCTCTAAAGCAGATTGTGGGGAATTTTAATCATGATTCATATCCATATGATAATGTAAAGAAGTGGACATCCATTGAATTGTCCTCGGCAGAGTCTATGGATGATAACCATAAGAAATTGGGTGGGAAAATCAGATGTGCTGTATTGCTGTCACCAAGATCTGAAGGAGAGATAAGTGATCAATATGATAACAGTAAAACAAAATCTGGATTTATCCAGATCAGTCCGAGAAGGGAAGGACCTTGGACTACTGTGAGGCTAAACTATGCTGCCCCAGCTGCTTGTTGGCGGTTAGGCAATGATGTTGTTGCTAGTGAAGTACGTGTAAGGGATGGCAATAGATATGTGAATATTAGGTCTCTTGTTTCAGTACGTAACAGTACCGATTTTGTGCTTGATTTGTGTCTTGTACCGAATGTTTCTATGGAAAACGTGAGTTTAACAGACAATTCAAGTACTCCCGAGGGTTTACAGACCCATAGCAACAAATTTCAGACAGATGAGTTCCTTGAAACTGAAAAGTACAGCCCGACCACTGGCTGGGTTGGCTCCATGATTCAACCAAGCCAAGATATGATTGAAGGTGGAGGATCCCATCAGGAATTTCCTACAGTTGAGTTACCACCAGGCTGGGAATGGGTTGATGATTGGCATTTGGATATGGCATCTATTGACACTGCTGATGGCTGGGTCTATGCTCCAGATATTGAAAGTCTAAAATGGCCCGAGTCATTTGATCCATTACGGTTTGTGAACTATGCAAGGCAAAGGAGATGGATCAGGAATAGGAAGCAAAGTACTACGAATCAGGAAATATATGTTGGAACTTTGAAACCTGGAGATACCATACCCCTTCCTCTATGTGGGTTGACACAACCTGGATTGTATGTCTTGCGTTTAAGGCCTTCTGATCTTAGCAATCATGATGAGTATTCTTGGAGTTCAGCGGTGGATGGGTCTGAACAACCAGAAGAGTCTGGTTCGTCAAAAGTATGTCCTGAGATAAGTGTATCGTCTCTTATTGAGTCAGAGAAACTGTTGTATTGCTCACAGATAAGTAGTACTTCTTCAAGTGGTTCCCACAAATTGTGGTTTTGTATGAGTATACAAGCGACAGAAATTGCAAAAGACATTCATTCTGATCCTATCCAGGATTGGAATCTTGTGGTTAAGTCCCCGCTATCTATCTCCAATTTTCTTCCCCTTGCAGCTGAGTTTTCTGTTCTTGAGATGCAAGAAAATGGTGGTTTTGTTGCCTGCTTCAGAGGGGTGTTTTTTCCAGGAAAGACCGTGAATGTTTTTAGTGCTGACATAAGAAAACCTTTATACTTTTCACTGCTTCCACAAAGAGGATGGTTGCCCATCCATGAAGCTGTCCTTTTGTCCCATCCTCATGAAGTTTCATCAAAAACAATAAACTTGAGAAGTTCGATATCTGGAAGGATTGTTCAAATTATTCTTGAGCAGAATTCCGTTGAAGAGCGTCCACTGCAGGCTAAGATCATTAGACTCTATGCTCCTTATTGGTTTTCAATTGCTAGGTGTCCTCCTCTCACATTCAGGCTTGTAGATATAGAAGGGAAGAAAAATACACGAAAGATAGGTGGTTTATTTCAGTCTAAAAAGATTAATGAAGTTGTCCTAGAGGAAATAACTGAAGAGGAAATATATGAAGGTCATACAATTGCTTCAGCTCTGAATTTTAAAATGCTGGGCCTTGCTGTGTCGATTGATCAATCTGGCAACAAGCAGTTTGGACCTGTTAAAGATCTTTCTCCACTTGGTGACATGGATGGATCATTGGATGTCCCTGCTTATGATGGCGAAGGCAATTGCATGCAGCTTTTTATTACCACGAAACCATGCCTGTATCAATCTGTTCCTACAAAGGTAATATCTGTCCGACCATTTATGACCTTCACCAACAGACTTGGTCGTGATGTATATATCAAGTTATGCAGCGAGGATGAACCAAAAGTCCTTCATCCATGTGATTCAAGAATATCATTTGTATATCGTGTATCAGATGGACCTAATAAACTTCAGGTTCGATTAGGAGACACCAACTGGTCGTTTCCTATTCAAATTGTAAAAGAGGACACAATTTCTCTTGTTTTAAGGAGGCATAATGGTACTCGGACATTTTTGAGGACAGAAATTCGGGGATATGAAGAAGGCTCACGTTTCATCATTGTATTCCGCCTTGGATCATCTAATGGTCCTATCAGAATCGAGAACAGAACTGTCAGCAAAACACTTAGCATTCGCCAGTCTGGGTTTGGTGAAGATGCGTGGGTTCCTCTAGAACCTTTTTCAACAACAAATTTTGCTTGGGAGGACCCATATGGCCAAAGATTCATAGAAGCTAAGGTCGACAATGATCTCTCCACTGGAGTTTGGGAACTTGATTTGGAAACAACAGGCATATGTTCTTCTGAGGAACTCGGATTGCAATTTCATGTTGTAGAAATTGGTGATATCAGGATAGCAAGGTTCAGTGACACCAGAACTACAGATGCAAGTTTGCATGAACAAATTAGGTCTCTGCAGCTTGCTGAAAATTGCGGACCTTCTAACCTGCAGAATACGAATCAGAATAATGGTGCCTCACCTCTTGAGCTTATAATTGAGTTTGGAGTTGTAGGGCTTTCAATTATAGACCATAGACCGAAGGAGGTCTCCTACTTCTATTTTGAGAGAGTCTTCGTATCATATTCTACAGGCTATGATGGTGGGACGACAAGCAGGTTTAAGCTCATACTGGGCCACGTGCAGCTGGACAACCAACTCCCTCTAACATTGATGCCAGTGTTGTTGGCTCCTGAGCCGGACTCTGATATCCATCATCCTGTTGTCAAGATGACTATAACAATGCGTAATGAAAATACTGATGGCATCCAGGTCTACCCTTACATTTATATCCGGGTGACTGAGAAGTGTTGGAGGCTTAATATTCACGAACCAATAATTTGGGCTTTGGTGGATCTGTACAATAATCTACAGTTAGATCGTCTGCCTAAAAGTTCTAGTGTCACAGAAGTTGATCCAGAAATACGCATCGACCTAGTAGACATTTCAGAAGTTAGGCTAAAGGTGTCACTGGAAACAGCACCAGCTCAGAGACCTCATGGAGTTCTAGGAGTATGGAGCCCAATACTATCTGCAGTTGGAAATGCATTCAAGATTCAGGTGCATCTGAGGAGGGTGATGCACAAAGACAGATTCATGCGGAGAAGTTCCATTGTCTCTGCCATTGGTAACCGCGTTTGGAGAGACTTGATCCATAATCCTCTACATTTGATATTTTCAGTTGATGTTCTTGGTATGACAAGTTCAACTTTGGCTTCTCTTAGTAAAGGGTTTGCTGAGCTCTCAACTGATGGGCAGTTTACTCACCTACGGTCAAAACAGGTATTTTCAAGGAGAATTACGGGGGTGGGTGATGGAATCATTCAAGGCACAGAAGCATTTGTGCAAGGTGTTGCTTTTGGCGTATCTGGAGTAGTGAAAAAGCCAGTTGAGAGTGCAAGACAGAACGGTCTGTCAGGACTTTTTCACGGGATTGGACGTGCATTCCTGGGAGTTATTGTGCAACCAATGAGTGGGGCATTGGACTTTTTCTCCTTGACTGTTGATGGAATTGGAGCAAGTTGTTCGAAATGCCTAGAGGTCTTCAATAGCAAGACAACATTCCAGAGAATTAGAAACCCCCGGGCAATCCGTGCCAATGGTATACTTACAGAGTATTCTGAGAGAGAGGCAGTTGGACAGATGATTTTATACCTTGCAGAAGCACATCGGCACTTTGGTTGTACTGAAATATTCAAGGAGCCCTCAAAGTTTGCTTGGTCTGATTATTATGAAGAGCATTTTGTTGTGCCTTACCAGCGGATTGTTTTAGTGACCAATAAGCGAGTGATGTTGCTTCAGTGTTTGGCTCCAGACAAAATGGACAAGAAACCGTGCAAGATTATGTGGGATGTGCCTTGGGAAGAGCTTATGGCAGTGGAGTTGGCTAAAGCAGGTCACAATCAGCCATCTCACTTGATCCTCCACCTCAAAAGTTTTAGGAGATCAGAGAATTTTGTCCGGGTCATAAAGTGCAATGTTGAAGATGAAGTAGAGGGAAGGGAACCCCAGGCTGTTAGAATCTGTTCTGCAGCATGTAGGATGTGGAAAGCAAACCAGTCTGCCATGAAAAGCCTGATGTTGAAGGTTCCATCAAGTCAGCGACATGTGTATTTTGCCTGGTCTGAAGCCGAGGGGAGAGAAAAACGTACTCTGAACAAAGCAGTGACTAGGCTGAGAGAGCTCCCGTCATACAGTTCTGCATCAGATGGTAGAAGATTTGTTAAACACAGCATCAACTTTTCAAAGATTTGGAGCAGTGAACAAGAATCCAGAGGTCGATGCACATTGTGCAAAAAGCAGGTTTTGGAAGATGCTGGATTATGTAGCATTTGGAGACCCATTTGTCCTGACGGGTATGTCTCTATTGGAGATATTGCTCACATTGGCAGCCATCCTCCAAACGTTGCTGCAGTTTACCGTAAAATTGACAGGTTGTTTGCACTTCCAGTTGGATACGACCTGGTGTGGAGAAATTGTTTGGATGACTATGCAACACCAGTATCAATTTGGCATCCTAGAGCTCCAGAAGGATTTGTATCTCCTGGATGCATAGCTGTGGCTGGTTTTGTTGAGCCAGAACCTGATTTGGTTCACTGTGTTGCTATATCACTTGCTGAGGAGACAGAATTTGAAGAGCAAAAGGTTTGGTCAGCTTCAGATTCTTATCCATGGGCATGTCACATTTATCAAGTCCGCAGTGAAGCTCTTCACTTCGTGGCATTAAGAACAAGCAAGGAAGAATCTGACTGGAAACCTATGAGGATTCTTGATGATCCTCAGCCCCTATTGCAGTCATTGAAAGAGCACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Chorein_N PH Pex24p SHR-BD VPS13 VPS13_C VPS13_mid_rpt Vps62

Protein Analysis

4337

Amino Acids

484.27

Weight (kDa)

5.69

Isoelectric Point (pI)

43.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
VPS13_N PF12624 1 - 537 4e-104 VPS13-like family N-terminal region
VPS13_N PF12624 558 - 673 4e-09 VPS13-like family N-terminal region
PH PF00169 802 - 910 6.4e-07 PH domain
VPS13_M PF25033 1318 - 1963 3.1e-09 VPS13-like family middle region
Vps62 PF06101 1971 - 2131 2.7e-09 Vacuolar protein sorting-associated protein 62
Vps62 PF06101 2201 - 2348 3.1e-11 Vacuolar protein sorting-associated protein 62
VPS13_VAB PF25036 2938 - 3200 2.3e-08 Vacuolar-sorting associated protein 13, adaptor binding domain
VPS13_VAB PF25036 3298 - 3474 1.1e-08 Vacuolar-sorting associated protein 13, adaptor binding domain
VPS13_C PF25037 3925 - 4033 1e-12 Intermembrane lipid transfer protein VPS13, C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 5 cut(s) 1398, 1772, 3125, 5577, 10697
AarI CACCTGC 2 cut(s) 4117, 5539
AasI GACNNNNNNGTC 3 cut(s) 11610, 12546, 12560
AatII GACGTC 1 cut(s) 2372
Acc36I ACCTGC 9 cut(s) 3391, 4117, 4696, 5539, 6749, 10659, 10809, 12086, 12493
Acc65I GGTACC 2 cut(s) 36, 2018
AccB1I GGYRCC 4 cut(s) 36, 2018, 2281, 10676
AccB7I CCANNNNNTGG 3 cut(s) 3287, 8613, 11675
AccII CGCG 5 cut(s) 1928, 3082, 7422, 7915, 11337
AclI AACGTT 3 cut(s) 2222, 7452, 12606
AcoI YGGCCR 3 cut(s) 220, 6113, 10420
AcvI CACGTG 1 cut(s) 10843
AcyI GRCGYC 2 cut(s) 2369, 6670
AdeI CACNNNGTG 4 cut(s) 7403, 9857, 12492, 12919
AflII CTTAAG 2 cut(s) 197, 3791
AflIII ACRYGT 4 cut(s) 973, 7420, 8395, 12307
AhlI ACTAGT 1 cut(s) 4088
AjiI CACGTC 1 cut(s) 11642
AjuI GAANNNNNNNTTGG 2 cut(s) 8877, 8909
AleI CACNNNNGTG 1 cut(s) 1697
AloI GAACNNNNNNTCC 6 cut(s) 7793, 7825, 9504, 9536, 10035, 10067
Alw44I GTGCAC 1 cut(s) 579
AlwNI CAGNNNCTG 7 cut(s) 90, 1327, 2585, 2747, 2786, 5075, 12785
Ama87I CYCGRG 5 cut(s) 1273, 4623, 8534, 8798, 11784
ApaLI GTGCAC 1 cut(s) 579
ArsI GACNNNNNNTTYG 6 cut(s) 865, 897, 1694, 1726, 12623, 12655
AseI ATTAAT 3 cut(s) 3683, 4254, 9702
Asp700I GAANNNNTTC 4 cut(s) 2852, 7177, 12226, 12909
Asp718I GGTACC 2 cut(s) 36, 2018
AspLEI GCGC 8 cut(s) 367, 1860, 2472, 2952, 5083, 6226, 7915, 7917
AsuC2I CCSGG 9 cut(s) 1883, 4624, 4625, 6264, 6687, 10997, 11785, 11786, 12164
AsuII TTCGAA 1 cut(s) 11729
AvaI CYCGRG 5 cut(s) 1273, 4623, 8534, 8798, 11784
AxyI CCTNAGG 2 cut(s) 5837, 6332
BaeGI GKGCMC 2 cut(s) 583, 3066
BaeI ACNNNNGTAYC 4 cut(s) 5739, 5772, 12687, 12720
BalI TGGCCA 3 cut(s) 222, 6115, 10422
BamHI GGATCC 4 cut(s) 226, 404, 4582, 8663
BanI GGYRCC 4 cut(s) 36, 2018, 2281, 10676
BanII GRGCYC 6 cut(s) 2516, 11225, 11445, 11907, 12387, 12727
BarI GAAGNNNNNNTAC 6 cut(s) 1001, 1033, 6292, 6324, 9124, 9156
BauI CACGAG 1 cut(s) 2628
BbrPI CACGTG 1 cut(s) 10843
BbsI GAAGAC 6 cut(s) 1371, 3054, 3803, 3918, 10768, 11737
BbvCI CCTCAGC 2 cut(s) 12819, 12981
BcgI CGANNNNNNTGC 4 cut(s) 10, 44, 11709, 11743
BciVI GTATCC 4 cut(s) 890, 1810, 6988, 12650
BclI TGATCA 6 cut(s) 411, 1464, 1762, 5218, 8251, 9805
BcnI CCSGG 9 cut(s) 1883, 4624, 4625, 6264, 6687, 10997, 11785, 11786, 12164
BcuI ACTAGT 1 cut(s) 4088
BfoI RGCGCY 3 cut(s) 2473, 2953, 6227
BfrI CTTAAG 2 cut(s) 197, 3791
BfuAI ACCTGC 9 cut(s) 3391, 4117, 4696, 5539, 6749, 10659, 10809, 12086, 12493
BfuI GTATCC 4 cut(s) 890, 1810, 6988, 12650
BglII AGATCT 8 cut(s) 998, 1133, 2343, 2374, 6427, 7144, 8231, 9841
BlpI GCTNAGC 3 cut(s) 267, 1866, 11439
BmcAI AGTACT 4 cut(s) 6436, 8530, 8872, 9136
BmeT110I CYCGRG 5 cut(s) 1273, 4623, 8534, 8798, 11784
BmgBI CACGTC 1 cut(s) 11642
BmrI ACTGGG 3 cut(s) 582, 6972, 10844
BmuI ACTGGG 3 cut(s) 582, 6972, 10844
BoxI GACNNNNGTC 3 cut(s) 1143, 1959, 7875
BpiI GAAGAC 6 cut(s) 1371, 3054, 3803, 3918, 10768, 11737
BplI GAGNNNNNCTC 4 cut(s) 4207, 4239, 10889, 10921
Bpu10I CCTNAGC 7 cut(s) 1719, 6912, 7849, 10440, 10896, 12819, 12981
Bpu1102I GCTNAGC 3 cut(s) 267, 1866, 11439
Bpu14I TTCGAA 1 cut(s) 11729
BpuMI CCSGG 9 cut(s) 1883, 4624, 4625, 6264, 6687, 10997, 11785, 11786, 12164
Bsa29I ATCGAT 4 cut(s) 1845, 2323, 3979, 6662
BsaAI YACGTR 5 cut(s) 52, 1097, 8396, 8447, 10843
BsaHI GRCGYC 2 cut(s) 2369, 6670
BsaI GGTCTC 7 cut(s) 1631, 5971, 8436, 10620, 10756, 11188, 12532
Bse118I RCCGGY 4 cut(s) 2712, 6421, 6591, 7357
Bse21I CCTNAGG 2 cut(s) 5837, 6332
Bse3DI GCAATG 8 cut(s) 674, 2543, 3309, 5508, 6342, 7054, 8377, 12184
BseCI ATCGAT 4 cut(s) 1845, 2323, 3979, 6662
BseMI GCAATG 8 cut(s) 674, 2543, 3309, 5508, 6342, 7054, 8377, 12184
BsePI GCGCGC 1 cut(s) 7913
BseRI GAGGAG 6 cut(s) 2369, 3366, 6995, 9612, 11287, 12836
BseSI GKGCMC 2 cut(s) 583, 3066
BseYI CCCAGC 9 cut(s) 2308, 3075, 3616, 4890, 8347, 8613, 8703, 8760, 9784
BsgI GTGCAG 5 cut(s) 353, 1853, 3132, 4724, 10865
Bsh1236I CGCG 5 cut(s) 1928, 3082, 7422, 7915, 11337
BshNI GGYRCC 4 cut(s) 36, 2018, 2281, 10676
BshVI ATCGAT 4 cut(s) 1845, 2323, 3979, 6662
BsiHKCI CYCGRG 5 cut(s) 1273, 4623, 8534, 8798, 11784
BsmBI CGTCTC 3 cut(s) 2360, 7865, 9093
BsmI GAATGC 9 cut(s) 148, 5692, 6383, 6529, 6942, 7544, 10335, 11249, 11645
Bso31I GGTCTC 7 cut(s) 1631, 5971, 8436, 10620, 10756, 11188, 12532
BsoBI CYCGRG 5 cut(s) 1273, 4623, 8534, 8798, 11784
Bsp119I TTCGAA 1 cut(s) 11729
Bsp1407I TGTACA 2 cut(s) 307, 11061
Bsp1720I GCTNAGC 3 cut(s) 267, 1866, 11439
Bsp19I CCATGG 4 cut(s) 206, 650, 5388, 12872
BspDI ATCGAT 4 cut(s) 1845, 2323, 3979, 6662
BspFNI CGCG 5 cut(s) 1928, 3082, 7422, 7915, 11337
BspHI TCATGA 7 cut(s) 2922, 3544, 4629, 6754, 8104, 8995, 9466
BspMI ACCTGC 9 cut(s) 3391, 4117, 4696, 5539, 6749, 10659, 10809, 12086, 12493
BspT104I TTCGAA 1 cut(s) 11729
BspT107I GGYRCC 4 cut(s) 36, 2018, 2281, 10676
BspTI CTTAAG 2 cut(s) 197, 3791
BspTNI GGTCTC 7 cut(s) 1631, 5971, 8436, 10620, 10756, 11188, 12532
BsrDI GCAATG 8 cut(s) 674, 2543, 3309, 5508, 6342, 7054, 8377, 12184
BsrFI RCCGGY 4 cut(s) 2712, 6421, 6591, 7357
BsrGI TGTACA 2 cut(s) 307, 11061
BssAI RCCGGY 4 cut(s) 2712, 6421, 6591, 7357
BssHII GCGCGC 1 cut(s) 7913
BssNAI GTATAC 2 cut(s) 9179, 11807
BssNI GRCGYC 2 cut(s) 2369, 6670
BssSI CACGAG 1 cut(s) 2628
Bst1107I GTATAC 2 cut(s) 9179, 11807
Bst2BI CACGAG 1 cut(s) 2628
BstACI GRCGYC 2 cut(s) 2369, 6670
BstAFI CTTAAG 2 cut(s) 197, 3791
BstAPI GCANNNNNTGC 6 cut(s) 143, 1548, 6056, 7403, 11795, 12492
BstAUI TGTACA 2 cut(s) 307, 11061
BstBAI YACGTR 5 cut(s) 52, 1097, 8396, 8447, 10843
BstBI TTCGAA 1 cut(s) 11729
BstDSI CCRYGG 5 cut(s) 206, 650, 5388, 7814, 12872
BstEII GGTNACC 1 cut(s) 11330
BstFNI CGCG 5 cut(s) 1928, 3082, 7422, 7915, 11337
BstH2I RGCGCY 3 cut(s) 2473, 2953, 6227
BstHHI GCGC 8 cut(s) 367, 1860, 2472, 2952, 5083, 6226, 7915, 7917
BstNSI RCATGY 8 cut(s) 659, 977, 5633, 6900, 9913, 12240, 12311, 12882
BstPAI GACNNNNGTC 3 cut(s) 1143, 1959, 7875
BstPI GGTNACC 1 cut(s) 11330
BstSLI GKGCMC 2 cut(s) 583, 3066
BstSNI TACGTA 2 cut(s) 1097, 8447
BstUI CGCG 5 cut(s) 1928, 3082, 7422, 7915, 11337
BstV2I GAAGAC 6 cut(s) 1371, 3054, 3803, 3918, 10768, 11737
BstXI CCANNNNNNTGG 4 cut(s) 693, 6806, 8703, 11043
BstZ17I GTATAC 2 cut(s) 9179, 11807
Bsu15I ATCGAT 4 cut(s) 1845, 2323, 3979, 6662
Bsu36I CCTNAGG 2 cut(s) 5837, 6332
BsuI GTATCC 4 cut(s) 890, 1810, 6988, 12650
BsuTUI ATCGAT 4 cut(s) 1845, 2323, 3979, 6662
BtgI CCRYGG 5 cut(s) 206, 650, 5388, 7814, 12872
BtrI CACGTC 1 cut(s) 11642
BveI ACCTGC 9 cut(s) 3391, 4117, 4696, 5539, 6749, 10659, 10809, 12086, 12493
CaiI CAGNNNCTG 7 cut(s) 90, 1327, 2585, 2747, 2786, 5075, 12785
CciI TCATGA 7 cut(s) 2922, 3544, 4629, 6754, 8104, 8995, 9466
CfoI GCGC 8 cut(s) 367, 1860, 2472, 2952, 5083, 6226, 7915, 7917
Cfr10I RCCGGY 4 cut(s) 2712, 6421, 6591, 7357
Cfr9I CCCGGG 2 cut(s) 4623, 11784
ClaI ATCGAT 4 cut(s) 1845, 2323, 3979, 6662
CseI GACGC 6 cut(s) 2733, 2878, 6458, 6659, 8006, 9545
CsiI ACCWGGT 1 cut(s) 12663
DraI TTTAAA 7 cut(s) 709, 3030, 5418, 6781, 7110, 7990, 9778
DraIII CACNNNGTG 4 cut(s) 7403, 9857, 12492, 12919
DrdI GACNNNNNNGTC 3 cut(s) 11610, 12546, 12560
DseDI GACNNNNNNGTC 3 cut(s) 11610, 12546, 12560
EaeI YGGCCR 3 cut(s) 220, 6113, 10420
EciI GGCGGA 1 cut(s) 10262
Ecl136II GAGCTC 3 cut(s) 11443, 12385, 12725
Eco105I TACGTA 2 cut(s) 1097, 8447
Eco147I AGGCCT 2 cut(s) 7705, 8977
Eco24I GRGCYC 6 cut(s) 2516, 11225, 11445, 11907, 12387, 12727
Eco31I GGTCTC 7 cut(s) 1631, 5971, 8436, 10620, 10756, 11188, 12532
Eco32I GATATC 7 cut(s) 1924, 4297, 4930, 7636, 9507, 10552, 10912
Eco53kI GAGCTC 3 cut(s) 11443, 12385, 12725
Eco72I CACGTG 1 cut(s) 10843
Eco81I CCTNAGG 2 cut(s) 5837, 6332
Eco88I CYCGRG 5 cut(s) 1273, 4623, 8534, 8798, 11784
Eco91I GGTNACC 1 cut(s) 11330
EcoICRI GAGCTC 3 cut(s) 11443, 12385, 12725
EcoO109I RGGNCCY 6 cut(s) 73, 5274, 6411, 8050, 8312, 10411
EcoO65I GGTNACC 1 cut(s) 11330
EcoRI GAATTC 2 cut(s) 7282, 9541
EcoRV GATATC 7 cut(s) 1924, 4297, 4930, 7636, 9507, 10552, 10912
EcoT22I ATGCAT 6 cut(s) 2740, 4401, 5003, 6944, 11251, 12755
EcoT38I GRGCYC 6 cut(s) 2516, 11225, 11445, 11907, 12387, 12727
Esp3I CGTCTC 3 cut(s) 2360, 7865, 9093
FauI CCCGC 5 cut(s) 499, 2712, 5262, 5434, 9258
FauNDI CATATG 5 cut(s) 3825, 4266, 8119, 10417, 10499
FbaI TGATCA 6 cut(s) 411, 1464, 1762, 5218, 8251, 9805
FriOI GRGCYC 6 cut(s) 2516, 11225, 11445, 11907, 12387, 12727
GlaI GCGC 8 cut(s) 366, 1859, 2471, 2951, 5082, 6225, 7914, 7916
GsaI CCCAGC 9 cut(s) 2312, 3079, 3620, 4894, 8351, 8617, 8707, 8764, 9788
HaeII RGCGCY 3 cut(s) 2473, 2953, 6227
HgaI GACGC 6 cut(s) 2733, 2878, 6458, 6659, 8006, 9545
HhaI GCGC 8 cut(s) 367, 1860, 2472, 2952, 5083, 6226, 7915, 7917
Hin1I GRCGYC 2 cut(s) 2369, 6670
Hin6I GCGC 8 cut(s) 365, 1858, 2470, 2950, 5081, 6224, 7913, 7915
HinP1I GCGC 8 cut(s) 365, 1858, 2470, 2950, 5081, 6224, 7913, 7915
HincII GTYRAC 9 cut(s) 661, 3223, 3443, 5088, 5518, 7830, 7996, 8943, 10447
HindII GTYRAC 9 cut(s) 661, 3223, 3443, 5088, 5518, 7830, 7996, 8943, 10447
HindIII AAGCTT 5 cut(s) 1493, 3507, 4187, 7010, 7485
HpaI GTTAAC 1 cut(s) 661
Hpy99I CGWCG 1 cut(s) 3444
Hsp92I GRCGYC 2 cut(s) 2369, 6670
HspAI GCGC 8 cut(s) 365, 1858, 2470, 2950, 5081, 6224, 7913, 7915
KflI GGGWCCC 1 cut(s) 8050
KpnI GGTACC 2 cut(s) 40, 2022
KroI GCCGGC 1 cut(s) 6421
KroNI GCCGGC 1 cut(s) 6423
Ksp22I TGATCA 6 cut(s) 411, 1464, 1762, 5218, 8251, 9805
KspAI GTTAAC 1 cut(s) 661
MabI ACCWGGT 1 cut(s) 12663
MfeI CAATTG 6 cut(s) 1758, 4605, 5636, 9606, 9756, 9904
MlsI TGGCCA 3 cut(s) 222, 6115, 10422
MluI ACGCGT 1 cut(s) 7420
MluNI TGGCCA 3 cut(s) 222, 6115, 10422
Mox20I TGGCCA 3 cut(s) 222, 6115, 10422
Mph1103I ATGCAT 6 cut(s) 2740, 4401, 5003, 6944, 11251, 12755
MroNI GCCGGC 1 cut(s) 6421
MroXI GAANNNNTTC 4 cut(s) 2852, 7177, 12226, 12909
MscI TGGCCA 3 cut(s) 222, 6115, 10422
Msp20I TGGCCA 3 cut(s) 222, 6115, 10422
MspA1I CMGCKG 9 cut(s) 506, 946, 1826, 2467, 8351, 9020, 9284, 10849, 11962
MspCI CTTAAG 2 cut(s) 197, 3791
MunI CAATTG 6 cut(s) 1758, 4605, 5636, 9606, 9756, 9904
Mva1269I GAATGC 9 cut(s) 148, 5692, 6383, 6529, 6942, 7544, 10335, 11249, 11645
MvnI CGCG 5 cut(s) 1928, 3082, 7422, 7915, 11337
NaeI GCCGGC 1 cut(s) 6423
NciI CCSGG 9 cut(s) 1883, 4624, 4625, 6264, 6687, 10997, 11785, 11786, 12164
NcoI CCATGG 4 cut(s) 206, 650, 5388, 12872
NdeI CATATG 5 cut(s) 3825, 4266, 8119, 10417, 10499
NgoMIV GCCGGC 1 cut(s) 6421
NmeAIII GCCGAG 3 cut(s) 6284, 8138, 12358
NsiI ATGCAT 6 cut(s) 2740, 4401, 5003, 6944, 11251, 12755
NspI RCATGY 8 cut(s) 659, 977, 5633, 6900, 9913, 12240, 12311, 12882
NspV TTCGAA 1 cut(s) 11729
OliI CACNNNNGTG 1 cut(s) 1697
PaeI GCATGC 1 cut(s) 9913
PaeR7I CTCGAG 1 cut(s) 1273
PagI TCATGA 7 cut(s) 2922, 3544, 4629, 6754, 8104, 8995, 9466
PaqCI CACCTGC 2 cut(s) 4117, 5539
PasI CCCWGGG 2 cut(s) 4744, 6869
PauI GCGCGC 1 cut(s) 7913
PceI AGGCCT 2 cut(s) 7705, 8977
PciI ACATGT 2 cut(s) 973, 12307
PcsI WCGNNNNNNNCGW 1 cut(s) 2320
PctI GAATGC 9 cut(s) 148, 5692, 6383, 6529, 6942, 7544, 10335, 11249, 11645
PdiI GCCGGC 1 cut(s) 6423
PdmI GAANNNNTTC 4 cut(s) 2852, 7177, 12226, 12909
PflFI GACNNNGTC 1 cut(s) 10005
PflMI CCANNNNNTGG 3 cut(s) 3287, 8613, 11675
PfoI TCCNGGA 7 cut(s) 3856, 3987, 6262, 6685, 9222, 9352, 12745
PmaCI CACGTG 1 cut(s) 10843
PmlI CACGTG 1 cut(s) 10843
Ppu21I YACGTR 5 cut(s) 52, 1097, 8396, 8447, 10843
PpuMI RGGWCCY 5 cut(s) 5274, 6411, 8050, 8312, 10411
PscI ACATGT 2 cut(s) 973, 12307
PshAI GACNNNNGTC 3 cut(s) 1143, 1959, 7875
PshBI ATTAAT 3 cut(s) 3683, 4254, 9702
PsiI TTATAA 5 cut(s) 1398, 1772, 3125, 5577, 10697
Psp124BI GAGCTC 3 cut(s) 11445, 12387, 12727
Psp1406I AACGTT 3 cut(s) 2222, 7452, 12606
Psp5II RGGWCCY 5 cut(s) 5274, 6411, 8050, 8312, 10411
PspCI CACGTG 1 cut(s) 10843
PspEI GGTNACC 1 cut(s) 11330
PspFI CCCAGC 9 cut(s) 2308, 3075, 3616, 4890, 8347, 8613, 8703, 8760, 9784
PspPPI RGGWCCY 5 cut(s) 5274, 6411, 8050, 8312, 10411
PspXI VCTCGAGB 1 cut(s) 1273
PsrI GAACNNNNNNTAC 4 cut(s) 4266, 4298, 11389, 11421
PstNI CAGNNNCTG 7 cut(s) 90, 1327, 2585, 2747, 2786, 5075, 12785
PsyI GACNNNGTC 1 cut(s) 10005
PteI GCGCGC 1 cut(s) 7913
PvuII CAGCTG 4 cut(s) 1826, 8351, 9284, 10849
SacI GAGCTC 3 cut(s) 11445, 12387, 12727
SalI GTCGAC 3 cut(s) 3221, 3441, 10445
ScaI AGTACT 4 cut(s) 6436, 8530, 8872, 9136
SexAI ACCWGGT 1 cut(s) 12663
Sfr274I CTCGAG 1 cut(s) 1273
SfuI TTCGAA 1 cut(s) 11729
SlaI CTCGAG 1 cut(s) 1273
SmaI CCCGGG 2 cut(s) 4625, 11786
SnaBI TACGTA 2 cut(s) 1097, 8447
SpeI ACTAGT 1 cut(s) 4088
SphI GCATGC 1 cut(s) 9913
SseBI AGGCCT 2 cut(s) 7705, 8977
SspI AATATT 9 cut(s) 454, 487, 1972, 4849, 5250, 7980, 8425, 11026, 11895
SstI GAGCTC 3 cut(s) 11445, 12387, 12727
StuI AGGCCT 2 cut(s) 7705, 8977
TaqII GACCGA 1 cut(s) 10756
TauI GCSGC 3 cut(s) 1931, 2470, 3082
TspMI CCCGGG 2 cut(s) 4623, 11784
Tth111I GACNNNGTC 1 cut(s) 10005
Van91I CCANNNNNTGG 3 cut(s) 3287, 8613, 11675
Vha464I CTTAAG 2 cut(s) 197, 3791
VneI GTGCAC 1 cut(s) 579
VspI ATTAAT 3 cut(s) 3683, 4254, 9702
XbaI TCTAGA 1 cut(s) 10375
XceI RCATGY 8 cut(s) 659, 977, 5633, 6900, 9913, 12240, 12311, 12882
XcmI CCANNNNNNNNNTGG 7 cut(s) 1909, 7732, 8355, 8706, 9423, 10349, 12708
XhoI CTCGAG 1 cut(s) 1273
XmaI CCCGGG 2 cut(s) 4623, 11784
XmnI GAANNNNTTC 4 cut(s) 2852, 7177, 12226, 12909
ZraI GACGTC 1 cut(s) 2370
ZrmI AGTACT 4 cut(s) 6436, 8530, 8872, 9136
Zsp2I ATGCAT 6 cut(s) 2740, 4401, 5003, 6944, 11251, 12755
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.