Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr6

Orthogroup ID

OG0004352

Physical Location & Seq

Genomic Coordinates Forward (+)

4670781 .. 4676791

Gene Structure 6011 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom06g03700.12

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2478 bp

ATGGAAGTTGGTGATATCAAGGTAGCTAGGTTCACAGACACCACAACTTCTGGGACAAGTTTGGATTTGCAAATTGCTGGAAATTGGAGGCATTCTCAAGTGCAAAACACCATTCAAAATAATAGTGCCTCGCCTGTTGAGCTTATAATTGAGTTTGGAATTGTAGGGATCTCTATTGTTGACCATAGACCAAAAGAAGTCTCCTACTTTTATTTTGAGAGAGTCTTCGTATCATATTGGACCGGTTATGATGGTGGTACAACAACCAGGTTCAAGCTCATACTGGGTCATCTGCAGTTGGACAACCAGCTCCCACTAACAGTGATGCCAGTGCTGTTGGCTCCAGAAATGAACTCTGACATGCATTATCCAGTGTTCAAAACAACTATTACAATGCGCAATGATAATAGTGACGGTGTCCAGGTGTACCCTTATGTTTGTATACGGGTAACTGATAAGAGTTGGAGGCTTAATATTCACGAACCGATAGTTTGGGCTTTGGTGGATTTCTACAATAATCTACAGTTAGATCGTTTGCCTAAAAGTCCTAGTGTCACAGTAGTTGATCCGGAAATACGCATTGACCAAATAGATATTGCAGAAGTTAGGCTGAAGGTGTCATTGGAAACAGCACCAGCCCAAAGACCTCATGGGGTTCTAGGAGTGTGGAGCCCCATACTATCAGCTGTCGGAAGTGCATTCAAGATTCAGGTGCATTTGAGAAGGGTGATGCACAAAGACAGATTCATGCGGAAAAGTTCCATTGTTTCTGCCATTGGTCACCGTATTTGGAGAGATCTGATCCATAATCCTTTACATTTGATATTTTCAGTCGATGTACTTGGTGTGGCAAGTTCAACCTTGGCTTCTCTTAGTAAAGGGTTTGCTGAGCTGTCAACTGATGGACAATTTCAGCAACTGCGTTCGAAGCAGGTGACGTCAAGGAGAATAACTGGGGTGGGTGATGGAATTATGCAAGGTACAGAAGCACTTGTGCAAGGTGTTGCCTTTGGGGTGTCTGGAGTGGTGAATAAGCCTGTAGAGAGTGCAAGACAAGATGGTGTTTTAGGACTAGTTCAAGGGCTTGGGCGTGCTTGTCTAGGAGTGATAGTGCAACCAGTCAGTGGGGCATTGGACTTCTTCTCATTGACTGTTGATGGAATCGGAGCAAGTTGTTCCAAATGTTTAGAGGTTTTCAATAGCAAGACAACCTTCCAGAGAATTAGAAATCCCCGAGCAATCCATGCTGATGCTGTACTTAGAGAATATTGTGAGAGAGAAGCTGTTGGGCAGATGATTTTATACCTTGCAGAAGCACATCGGCACTTTGGTTGTACTGAAATATTCAAGGAGCCATCAAAGTTTGCTTTGTCTGACTATTATGAAGATCATTATGTTGTGCCTTACCAACGGATTGTATTAGTGACTAATAAGCGAGTCATGCTGCTTCAGTGTTTGGCTCCAGATAAAATGGATAAGAAACCTTGCAAGATTATGTGGGATGTACCTTGGGAAGAGCTCATGGCTATGGAGTTGGCAAAAGCAGGCTGCAATCAACCATCTCACTTCATAAATCAAGATCGATCCTCCACCTTAAAAATTTTTTCTCCAAGGAGATCGGAAAATTTTGTTCGGGTGATAAAGTGCATTGTTGAAGAAGTTCCGGGAAATGAACCCCAAGCTGTTAGGATCTGTTCCGTAGTGCGTAAGATGTGGAAAGCATATCAGTCGGACATGAAAAGCCTAATGCTGAAGGTTCCATCAAGCCAGCGACATGTGTATTTTTCCTGGTCTGAAGCTGATGGGAGAGAGCACCCTATACAGAACAAGGCAATTACTAGGCTGAGAGAGCTCCCATCATACAATTCTGCATTGAATGATAGATTTGTTAAACACAACATCAACTTTTCTAAGATTTGGAGCAGCGAACAAGAATCCAGAAGTCGATGCATGTTGTGCAGAAAACAGGTTCCCGAAGATGATGTAATATGTAGCATTTGGAGACCCATCTGTCCTGACGGCTATGTCTCGATTGGTGATATTGCTCACATTGGCAGCCATCCTCCAAACGTTGCTGCTGTTTATTGCAAGATTGACAGATTGTTTGCACTTCCAGTTGGTTATGACTTGGTATGGAGGAACTGCCTGGAGGACTATGCAGCACCGGTATCAATTTGGCATCCTCGGGCTCCAGAGGGATATGTGTCTCCCGGATGCATTGCTGTGCCTAGTTTTATTGAGCCAGAACTTGATATAGCGTATTGTGTGGCTGAATCATTTGCTGAAGAGGCGGAATTCGAAGGGCAAAGGGTTTGGTCTGCTCCAGATTCTTACCCCTGGGCGTGTCACATTTATCAAGTCCAAAGCGACGCACTTCACCTTGTGGCTCTAAGGCAAACCAAGGAAGAATCTGGCTGGAAACCTATGAGGGTTATTAACGATCCTCGGCCTCTATTGGAATCACTAGAAGAGAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Chorein_N PH Pex24p SHR-BD VPS13 VPS13_C VPS13_mid_rpt Vps62

Protein Analysis

826

Amino Acids

93.15

Weight (kDa)

6.79

Isoelectric Point (pI)

46.75

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004352)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G17140 AT4G17140 AT4G17140
fragaria_vesca	FvH4_5g20820 FvH4_5g20820 FvH4_5g20820 FvH4_5g20820 FvH4_5g20820 FvH4_5g20820 FvH4_5g20820 FvH4_5g20820
malus_domestica	MD04G1057200.v1.1 MD06G1043800.v1.1
prunus_persica	Prupe.5G050700_v2.0.a1 Prupe.5G050700_v2.0.a1 Prupe.5G050700_v2.0.a1 Prupe.5G050700_v2.0.a1
pyrus_communis	pycom04g05080 pycom06g03680 pycom06g03700
rosa_chinensis	RchiOBHm_Chr7g0207821
rosa_laevigata	RLG00000003286
rosa_multiflora	Rmu_sc0004647.1_g000014 Rmu_sc0010112.1_g000001
rosa_roxburghii	Rroxscaffold_3G00251130 Rroxscaffold_3G00251140
rosa_rugosa	Rorug07G0099700
rosa_samantha	Rh7AG232900 Rh7BG228200 Rh7CG246900 Rh7DG238900
rosa_wichuraiana	Rw7G019940

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	146
AarI	CACCTGC	1 cut(s)	922
AasI	GACNNNNNNGTC	2 cut(s)	2010, 2024
AatII	GACGTC	1 cut(s)	941
Acc16I	TGCGCA	1 cut(s)	398
Acc36I	ACCTGC	1 cut(s)	922
AccB7I	CCANNNNNTGG	1 cut(s)	1124
AccI	GTMKAC	1 cut(s)	442
AccIII	TCCGGA	1 cut(s)	568
AciI	CCGC	2 cut(s)	751, 2291
AclI	AACGTT	1 cut(s)	2070
AclWI	GGATC	6 cut(s)	176, 560, 796, 1578, 1697, 2435
AcsI	RAATTY	3 cut(s)	1599, 1624, 2294
AcuI	CTGAAG	5 cut(s)	632, 1433, 1772, 1815, 2304
AcyI	GRCGYC	1 cut(s)	938
AdeI	CACNNNGTG	1 cut(s)	2383
AfaI	GTAC	7 cut(s)	259, 428, 840, 982, 1257, 1336, 1506
AfiI	CCNNNNNNNGG	1 cut(s)	1124
AflIII	ACRYGT	1 cut(s)	1774
AgeI	ACCGGT	2 cut(s)	242, 2164
AhlI	ACTAGT	1 cut(s)	1072
AjnI	CCWGG	5 cut(s)	266, 420, 1787, 2145, 2336
AjuI	GAANNNNNNNTTGG	2 cut(s)	605, 637
Alw21I	GWGCWC	3 cut(s)	1521, 1815, 1854
Alw26I	GTCTC	4 cut(s)	205, 1996, 2032, 2211
AlwI	GGATC	6 cut(s)	176, 560, 796, 1578, 1697, 2435
AlwNI	CAGNNNCTG	1 cut(s)	919
Ama87I	CYCGRG	2 cut(s)	1233, 2184
Aor13HI	TCCGGA	1 cut(s)	568
AoxI	GGCC	1 cut(s)	2447
ApeKI	GCWGC	6 cut(s)	1444, 1548, 1923, 2055, 2075, 2159
ApoI	RAATTY	3 cut(s)	1599, 1624, 2294
ArsI	GACNNNNNNTTYG	2 cut(s)	2087, 2119
AsiGI	ACCGGT	2 cut(s)	242, 2164
Asp700I	GAANNNNTTC	1 cut(s)	1659
AspLEI	GCGC	1 cut(s)	399
AspS9I	GGNCC	1 cut(s)	240
AsuC2I	CCSGG	2 cut(s)	1665, 2211
AsuHPI	GGTGA	9 cut(s)	23, 739, 773, 946, 974, 1039, 1648, 2048, 2369
AsuII	TTCGAA	2 cut(s)	926, 2298
AvaI	CYCGRG	2 cut(s)	1233, 2184
AvaII	GGWCC	1 cut(s)	240
BanII	GRGCYC	4 cut(s)	674, 1521, 1854, 2191
BbsI	GAAGAC	1 cut(s)	217
Bbv12I	GWGCWC	3 cut(s)	1521, 1815, 1854
BbvI	GCAGC	6 cut(s)	1431, 1535, 1935, 2062, 2067, 2171
BceAI	ACGGC	1 cut(s)	2035
BcgI	CGANNNNNNTGC	2 cut(s)	1710, 1744
BciT130I	CCWGG	5 cut(s)	268, 422, 1789, 2147, 2338
BcnI	CCSGG	2 cut(s)	1665, 2211
BcoDI	GTCTC	4 cut(s)	205, 1996, 2032, 2211
BcuI	ACTAGT	1 cut(s)	1072
BfaI	CTAG	8 cut(s)	27, 549, 659, 1073, 1100, 1839, 2229, 2465
BfmI	CTRYAG	3 cut(s)	293, 521, 1038
BfuAI	ACCTGC	1 cut(s)	922
BglII	AGATCT	1 cut(s)	796
BisI	GCNGC	6 cut(s)	1445, 1549, 1924, 2056, 2076, 2160
BlpI	GCTNAGC	1 cut(s)	888
BlsI	GCNGC	6 cut(s)	1446, 1550, 1925, 2057, 2077, 2161
Bme1390I	CCNGG	7 cut(s)	268, 422, 1665, 1789, 2147, 2211, 2338
Bme18I	GGWCC	1 cut(s)	240
BmeT110I	CYCGRG	2 cut(s)	1233, 2184
BmgT120I	GGNCC	1 cut(s)	240
BmiI	GGNNCC	7 cut(s)	342, 671, 1353, 1461, 1758, 1971, 2190
BmrFI	CCNGG	7 cut(s)	268, 422, 1665, 1789, 2147, 2211, 2338
BmrI	ACTGGG	2 cut(s)	293, 963
BmsI	GCATC	6 cut(s)	315, 720, 1240, 1937, 2188, 2204
BmuI	ACTGGG	2 cut(s)	293, 963
BpiI	GAAGAC	1 cut(s)	217
BplI	GAGNNNNNCTC	2 cut(s)	79, 111
BpmI	CTGGAG	6 cut(s)	327, 1041, 1446, 2168, 2175, 2307
Bpu1102I	GCTNAGC	1 cut(s)	888
Bpu14I	TTCGAA	2 cut(s)	926, 2298
BpuEI	CTTGAG	1 cut(s)	81
BpuMI	CCSGG	2 cut(s)	1665, 2211
Bsa29I	ATCGAT	1 cut(s)	1582
BsaHI	GRCGYC	1 cut(s)	938
BsaI	GGTCTC	1 cut(s)	1996
BsaJI	CCNNGG	8 cut(s)	861, 1508, 1610, 2183, 2336, 2337, 2400, 2444
BsaWI	WCCGGW	3 cut(s)	242, 568, 2164
BsaXI	ACNNNNNCTCC	2 cut(s)	1095, 1125
Bsc4I	CCNNNNNNNGG	1 cut(s)	1124
Bse118I	RCCGGY	2 cut(s)	242, 2164
Bse1I	ACTGG	6 cut(s)	288, 329, 371, 958, 1118, 2114
Bse3DI	GCAATG	2 cut(s)	406, 2217
BseAI	TCCGGA	1 cut(s)	568
BseBI	CCWGG	5 cut(s)	268, 422, 1789, 2147, 2338
BseCI	ATCGAT	1 cut(s)	1582
BseDI	CCNNGG	8 cut(s)	861, 1508, 1610, 2183, 2336, 2337, 2400, 2444
BseGI	GGATG	4 cut(s)	1507, 2059, 2179, 2219
BseLI	CCNNNNNNNGG	1 cut(s)	1124
BseMI	GCAATG	2 cut(s)	406, 2217
BseMII	CTCAG	2 cut(s)	879, 1835
BseNI	ACTGG	6 cut(s)	288, 329, 371, 958, 1118, 2114
BseXI	GCAGC	6 cut(s)	1431, 1535, 1935, 2062, 2067, 2171
BsgI	GTGCAG	1 cut(s)	1978
BshFI	GGCC	1 cut(s)	2449
BshTI	ACCGGT	2 cut(s)	242, 2164
BshVI	ATCGAT	1 cut(s)	1582
BsiHKAI	GWGCWC	3 cut(s)	1521, 1815, 1854
BsiHKCI	CYCGRG	2 cut(s)	1233, 2184
BsiSI	CCGG	5 cut(s)	243, 569, 1664, 2165, 2211
BslFI	GGGAC	1 cut(s)	67
BslI	CCNNNNNNNGG	1 cut(s)	1124
BsmAI	GTCTC	4 cut(s)	205, 1996, 2032, 2211
BsmFI	GGGAC	1 cut(s)	67
BsmI	GAATGC	2 cut(s)	91, 698
BsnI	GGCC	1 cut(s)	2449
Bso31I	GGTCTC	1 cut(s)	1996
BsoBI	CYCGRG	2 cut(s)	1233, 2184
Bsp119I	TTCGAA	2 cut(s)	926, 2298
Bsp1286I	GDGCHC	5 cut(s)	674, 1521, 1815, 1854, 2191
Bsp13I	TCCGGA	1 cut(s)	568
Bsp1720I	GCTNAGC	1 cut(s)	888
BspACI	CCGC	2 cut(s)	751, 2291
BspANI	GGCC	1 cut(s)	2449
BspCNI	CTCAG	2 cut(s)	880, 1836
BspDI	ATCGAT	1 cut(s)	1582
BspEI	TCCGGA	1 cut(s)	568
BspLI	GGNNCC	7 cut(s)	342, 671, 1353, 1461, 1758, 1971, 2190
BspMAI	CTGCAG	1 cut(s)	297
BspMI	ACCTGC	1 cut(s)	922
BspPI	GGATC	6 cut(s)	176, 560, 796, 1578, 1697, 2435
BspQI	GCTCTTC	1 cut(s)	1509
BspT104I	TTCGAA	2 cut(s)	926, 2298
BspTNI	GGTCTC	1 cut(s)	1996
BsrDI	GCAATG	2 cut(s)	406, 2217
BsrFI	RCCGGY	2 cut(s)	242, 2164
BsrI	ACTGG	6 cut(s)	288, 329, 371, 958, 1118, 2114
BssAI	RCCGGY	2 cut(s)	242, 2164
BssECI	CCNNGG	8 cut(s)	861, 1508, 1610, 2183, 2336, 2337, 2400, 2444
BssNAI	GTATAC	1 cut(s)	443
BssNI	GRCGYC	1 cut(s)	938
BssT1I	CCWWGG	4 cut(s)	861, 1508, 1610, 2400
Bst1107I	GTATAC	1 cut(s)	443
Bst2UI	CCWGG	5 cut(s)	268, 422, 1789, 2147, 2338
Bst4CI	ACNGT	6 cut(s)	322, 416, 525, 559, 785, 1153
Bst6I	CTCTTC	3 cut(s)	1509, 2280, 2463
BstACI	GRCGYC	1 cut(s)	938
BstAPI	GCANNNNNTGC	2 cut(s)	1244, 1956
BstBI	TTCGAA	2 cut(s)	926, 2298
BstC8I	GCNNGC	3 cut(s)	1092, 1546, 1769
BstDEI	CTNAG	6 cut(s)	872, 888, 1259, 1844, 1911, 2390
BstEII	GGTNACC	1 cut(s)	779
BstF5I	GGATG	4 cut(s)	1507, 2059, 2179, 2219
BstHHI	GCGC	1 cut(s)	399
BstMAI	GTCTC	4 cut(s)	205, 1996, 2032, 2211
BstMWI	GCNNNNNNNGC	7 cut(s)	139, 928, 1244, 1441, 1849, 1956, 2288
BstNI	CCWGG	5 cut(s)	268, 422, 1789, 2147, 2338
BstNSI	RCATGY	3 cut(s)	364, 1778, 1954
BstPI	GGTNACC	1 cut(s)	779
BstSCI	CCNGG	7 cut(s)	266, 420, 1663, 1787, 2145, 2209, 2336
BstSFI	CTRYAG	3 cut(s)	293, 521, 1038
BstV1I	GCAGC	6 cut(s)	1431, 1535, 1935, 2062, 2067, 2171
BstV2I	GAAGAC	1 cut(s)	217
BstX2I	RGATCY	3 cut(s)	168, 796, 1689
BstYI	RGATCY	3 cut(s)	168, 796, 1689
BstZ17I	GTATAC	1 cut(s)	443
Bsu15I	ATCGAT	1 cut(s)	1582
BsuRI	GGCC	1 cut(s)	2449
BsuTUI	ATCGAT	1 cut(s)	1582
BtsCI	GGATG	4 cut(s)	1507, 2059, 2179, 2219
BtsIMutI	CAGTG	5 cut(s)	327, 336, 378, 1129, 1457
BveI	ACCTGC	1 cut(s)	922
Cac8I	GCNNGC	3 cut(s)	1092, 1546, 1769
CaiI	CAGNNNCTG	1 cut(s)	919
CfoI	GCGC	1 cut(s)	399
Cfr10I	RCCGGY	2 cut(s)	242, 2164
Cfr13I	GGNCC	1 cut(s)	240
ClaI	ATCGAT	1 cut(s)	1582
CseI	GACGC	1 cut(s)	2378
CsiI	ACCWGGT	1 cut(s)	266
Csp6I	GTAC	7 cut(s)	258, 427, 839, 981, 1256, 1335, 1505
CspAI	ACCGGT	2 cut(s)	242, 2164
CviAII	CATG	9 cut(s)	361, 650, 748, 1244, 1441, 1522, 1735, 1775, 1951
CviQI	GTAC	7 cut(s)	258, 427, 839, 981, 1256, 1335, 1505
DdeI	CTNAG	6 cut(s)	872, 888, 1259, 1844, 1911, 2390
DraIII	CACNNNGTG	1 cut(s)	2383
DrdI	GACNNNNNNGTC	2 cut(s)	2010, 2024
DseDI	GACNNNNNNGTC	2 cut(s)	2010, 2024
Eam1104I	CTCTTC	3 cut(s)	1509, 2280, 2463
EarI	CTCTTC	3 cut(s)	1509, 2280, 2463
EciI	GGCGGA	1 cut(s)	2306
Ecl136II	GAGCTC	2 cut(s)	1519, 1852
Eco130I	CCWWGG	4 cut(s)	861, 1508, 1610, 2400
Eco24I	GRGCYC	4 cut(s)	674, 1521, 1854, 2191
Eco31I	GGTCTC	1 cut(s)	1996
Eco32I	GATATC	1 cut(s)	16
Eco47I	GGWCC	1 cut(s)	240
Eco53kI	GAGCTC	2 cut(s)	1519, 1852
Eco57I	CTGAAG	5 cut(s)	632, 1433, 1772, 1815, 2304
Eco88I	CYCGRG	2 cut(s)	1233, 2184
Eco91I	GGTNACC	1 cut(s)	779
EcoICRI	GAGCTC	2 cut(s)	1519, 1852
EcoO65I	GGTNACC	1 cut(s)	779
EcoRI	GAATTC	1 cut(s)	2294
EcoRII	CCWGG	5 cut(s)	266, 420, 1787, 2145, 2336
EcoRV	GATATC	1 cut(s)	16
EcoT14I	CCWWGG	4 cut(s)	861, 1508, 1610, 2400
EcoT22I	ATGCAT	3 cut(s)	366, 1952, 2219
EcoT38I	GRGCYC	4 cut(s)	674, 1521, 1854, 2191
ErhI	CCWWGG	4 cut(s)	861, 1508, 1610, 2400
FaeI	CATG	9 cut(s)	364, 653, 751, 1247, 1444, 1525, 1738, 1778, 1954
FalI	AAGNNNNNCTT	2 cut(s)	1196, 1228
FaqI	GGGAC	1 cut(s)	67
FatI	CATG	9 cut(s)	360, 649, 747, 1243, 1440, 1521, 1734, 1774, 1950
FblI	GTMKAC	1 cut(s)	442
Fnu4HI	GCNGC	6 cut(s)	1445, 1549, 1924, 2056, 2076, 2160
FokI	GGATG	4 cut(s)	1514, 2046, 2166, 2226
FriOI	GRGCYC	4 cut(s)	674, 1521, 1854, 2191
Fsp4HI	GCNGC	6 cut(s)	1445, 1549, 1924, 2056, 2076, 2160
FspBI	CTAG	8 cut(s)	27, 549, 659, 1073, 1100, 1839, 2229, 2465
FspI	TGCGCA	1 cut(s)	398
GlaI	GCGC	1 cut(s)	398
GluI	GCNGC	6 cut(s)	1445, 1549, 1924, 2056, 2076, 2160
GsuI	CTGGAG	6 cut(s)	327, 1041, 1446, 2168, 2175, 2307
HaeIII	GGCC	1 cut(s)	2449
HapII	CCGG	5 cut(s)	243, 569, 1664, 2165, 2211
HgaI	GACGC	1 cut(s)	2378
HhaI	GCGC	1 cut(s)	399
Hin1I	GRCGYC	1 cut(s)	938
Hin1II	CATG	9 cut(s)	364, 653, 751, 1247, 1444, 1525, 1738, 1778, 1954
Hin6I	GCGC	1 cut(s)	397
HinP1I	GCGC	1 cut(s)	397
HincII	GTYRAC	2 cut(s)	181, 897
HindII	GTYRAC	2 cut(s)	181, 897
HpaII	CCGG	5 cut(s)	243, 569, 1664, 2165, 2211
HphI	GGTGA	9 cut(s)	23, 739, 773, 946, 974, 1039, 1648, 2048, 2369
Hpy166II	GTNNAC	5 cut(s)	33, 181, 427, 443, 897
Hpy188I	TCNGA	8 cut(s)	358, 692, 801, 1166, 1375, 1621, 1732, 1795
Hpy8I	GTNNAC	5 cut(s)	33, 181, 427, 443, 897
Hpy99I	CGWCG	1 cut(s)	2372
HpyAV	CCTTC	5 cut(s)	607, 717, 1222, 1747, 2294
HpyCH4III	ACNGT	6 cut(s)	322, 416, 525, 559, 785, 1153
HpyCH4IV	ACGT	2 cut(s)	938, 2070
HpyF10VI	GCNNNNNNNGC	7 cut(s)	139, 928, 1244, 1441, 1849, 1956, 2288
HpyF3I	CTNAG	6 cut(s)	872, 888, 1259, 1844, 1911, 2390
HpySE526I	ACGT	2 cut(s)	938, 2070
Hsp92I	GRCGYC	1 cut(s)	938
Hsp92II	CATG	9 cut(s)	364, 653, 751, 1247, 1444, 1525, 1738, 1778, 1954
HspAI	GCGC	1 cut(s)	397
Kpn2I	TCCGGA	1 cut(s)	568
LguI	GCTCTTC	1 cut(s)	1509
Lsp1109I	GCAGC	6 cut(s)	1431, 1535, 1935, 2062, 2067, 2171
LweI	GCATC	6 cut(s)	315, 720, 1240, 1937, 2188, 2204
MabI	ACCWGGT	1 cut(s)	266
MaeI	CTAG	8 cut(s)	27, 549, 659, 1073, 1100, 1839, 2229, 2465
MaeII	ACGT	2 cut(s)	938, 2070
MaeIII	GTNAC	7 cut(s)	410, 448, 553, 779, 934, 1423, 2345
MboII	GAAGA	8 cut(s)	217, 1132, 1397, 1526, 1667, 1988, 2297, 2417
MflI	RGATCY	3 cut(s)	168, 796, 1689
MhlI	GDGCHC	5 cut(s)	674, 1521, 1815, 1854, 2191
MlyI	GAGTC	2 cut(s)	231, 1446
MmeI	TCCRAC	4 cut(s)	279, 443, 670, 1710
Mph1103I	ATGCAT	3 cut(s)	366, 1952, 2219
MroI	TCCGGA	1 cut(s)	568
MroXI	GAANNNNTTC	1 cut(s)	1659
MseI	TTAA	4 cut(s)	471, 1595, 1890, 2436
MslI	CAYNNNNRTG	3 cut(s)	1248, 1526, 2222
MspA1I	CMGCKG	1 cut(s)	686
MspI	CCGG	5 cut(s)	243, 569, 1664, 2165, 2211
MspR9I	CCNGG	7 cut(s)	268, 422, 1665, 1789, 2147, 2211, 2338
Mva1269I	GAATGC	2 cut(s)	91, 698
MvaI	CCWGG	5 cut(s)	268, 422, 1789, 2147, 2338
MwoI	GCNNNNNNNGC	7 cut(s)	139, 928, 1244, 1441, 1849, 1956, 2288
NciI	CCSGG	2 cut(s)	1665, 2211
NlaIII	CATG	9 cut(s)	364, 653, 751, 1247, 1444, 1525, 1738, 1778, 1954
NlaIV	GGNNCC	7 cut(s)	342, 671, 1353, 1461, 1758, 1971, 2190
NmeAIII	GCCGAG	1 cut(s)	2425
NmuCI	GTSAC	6 cut(s)	410, 553, 779, 934, 1423, 2345
NsbI	TGCGCA	1 cut(s)	398
NsiI	ATGCAT	3 cut(s)	366, 1952, 2219
NspI	RCATGY	3 cut(s)	364, 1778, 1954
NspV	TTCGAA	2 cut(s)	926, 2298
PaqCI	CACCTGC	1 cut(s)	922
PasI	CCCWGGG	1 cut(s)	2337
PciI	ACATGT	1 cut(s)	1774
PciSI	GCTCTTC	1 cut(s)	1509
PctI	GAATGC	2 cut(s)	91, 698
PdmI	GAANNNNTTC	1 cut(s)	1659
PfeI	GAWTC	8 cut(s)	706, 744, 1161, 1934, 2273, 2327, 2408, 2459
PflFI	GACNNNGTC	1 cut(s)	416
PflMI	CCANNNNNTGG	1 cut(s)	1124
PfoI	TCCNGGA	2 cut(s)	1663, 2209
PinAI	ACCGGT	2 cut(s)	242, 2164
PkrI	GCNGC	6 cut(s)	1446, 1550, 1925, 2057, 2077, 2161
PleI	GAGTC	2 cut(s)	230, 1445
PpsI	GAGTC	2 cut(s)	230, 1445
PscI	ACATGT	1 cut(s)	1774
PsiI	TTATAA	1 cut(s)	146
Psp124BI	GAGCTC	2 cut(s)	1521, 1854
Psp1406I	AACGTT	1 cut(s)	2070
Psp6I	CCWGG	5 cut(s)	266, 420, 1787, 2145, 2336
PspEI	GGTNACC	1 cut(s)	779
PspGI	CCWGG	5 cut(s)	266, 420, 1787, 2145, 2336
PspN4I	GGNNCC	7 cut(s)	342, 671, 1353, 1461, 1758, 1971, 2190
PspPI	GGNCC	1 cut(s)	240
PstI	CTGCAG	1 cut(s)	297
PstNI	CAGNNNCTG	1 cut(s)	919
PsuI	RGATCY	3 cut(s)	168, 796, 1689
PsyI	GACNNNGTC	1 cut(s)	416
PvuII	CAGCTG	1 cut(s)	686
RsaI	GTAC	7 cut(s)	259, 428, 840, 982, 1257, 1336, 1506
RsaNI	GTAC	7 cut(s)	258, 427, 839, 981, 1256, 1335, 1505
RseI	CAYNNNNRTG	3 cut(s)	1248, 1526, 2222
SacI	GAGCTC	2 cut(s)	1521, 1854
SapI	GCTCTTC	1 cut(s)	1509
SaqAI	TTAA	4 cut(s)	471, 1595, 1890, 2436
SatI	GCNGC	6 cut(s)	1445, 1549, 1924, 2056, 2076, 2160
Sau96I	GGNCC	1 cut(s)	240
SchI	GAGTC	2 cut(s)	231, 1446
ScrFI	CCNGG	7 cut(s)	268, 422, 1665, 1789, 2147, 2211, 2338
SduI	GDGCHC	5 cut(s)	674, 1521, 1815, 1854, 2191
SexAI	ACCWGGT	1 cut(s)	266
SfaNI	GCATC	6 cut(s)	315, 720, 1240, 1937, 2188, 2204
SfcI	CTRYAG	3 cut(s)	293, 521, 1038
SfuI	TTCGAA	2 cut(s)	926, 2298
SinI	GGWCC	1 cut(s)	240
SmiMI	CAYNNNNRTG	3 cut(s)	1248, 1526, 2222
SmlI	CTYRAG	1 cut(s)	96
SmoI	CTYRAG	1 cut(s)	96
SpeI	ACTAGT	1 cut(s)	1072
SsiI	CCGC	2 cut(s)	751, 2291
SspI	AATATT	3 cut(s)	475, 1268, 1344
SspMI	CTAG	8 cut(s)	27, 549, 659, 1073, 1100, 1839, 2229, 2465
SstI	GAGCTC	2 cut(s)	1521, 1854
StyD4I	CCNGG	7 cut(s)	266, 420, 1663, 1787, 2145, 2209, 2336
StyI	CCWWGG	4 cut(s)	861, 1508, 1610, 2400
TaaI	ACNGT	6 cut(s)	322, 416, 525, 559, 785, 1153
TaiI	ACGT	2 cut(s)	941, 2073
TaqI	TCGA	6 cut(s)	834, 926, 1582, 1945, 2030, 2298
TatI	WGTACW	3 cut(s)	838, 1255, 1334
TfiI	GAWTC	8 cut(s)	706, 744, 1161, 1934, 2273, 2327, 2408, 2459
Tru1I	TTAA	4 cut(s)	471, 1595, 1890, 2436
Tru9I	TTAA	4 cut(s)	471, 1595, 1890, 2436
TscAI	CASTG	5 cut(s)	327, 336, 378, 1129, 1457
TseFI	GTSAC	6 cut(s)	410, 553, 779, 934, 1423, 2345
TseI	GCWGC	6 cut(s)	1444, 1548, 1923, 2055, 2075, 2159
Tsp45I	GTSAC	6 cut(s)	410, 553, 779, 934, 1423, 2345
TspDTI	ATGAA	6 cut(s)	365, 736, 1398, 1558, 1686, 1751
TspGWI	ACGGA	2 cut(s)	1426, 1687
TspRI	CASTG	5 cut(s)	327, 336, 378, 1129, 1457
Tth111I	GACNNNGTC	1 cut(s)	416
Van91I	CCANNNNNTGG	1 cut(s)	1124
VpaK11BI	GGWCC	1 cut(s)	240
XapI	RAATTY	3 cut(s)	1599, 1624, 2294
XceI	RCATGY	3 cut(s)	364, 1778, 1954
XcmI	CCANNNNNNNNNTGG	1 cut(s)	647
XmiI	GTMKAC	1 cut(s)	442
XmnI	GAANNNNTTC	1 cut(s)	1659
XspI	CTAG	8 cut(s)	27, 549, 659, 1073, 1100, 1839, 2229, 2465
ZraI	GACGTC	1 cut(s)	939
Zsp2I	ATGCAT	3 cut(s)	366, 1952, 2219

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.