Rmu_sc0010112.1_g000001

Vacuolar protein sorting-associated protein

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0010112.1
Physical Location & Seq
Reverse (-)
2331 .. 12602
10272 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0010112.1_g000001.1.cds

Sequence Viewer

Length: 4347 bp
atgcaggaatttcctacatttgagttaccaccaggctgggaatgggttgatgattggcatttggatatggcatctattgacactgctgatggctgggtctatgctccagatattgaaagtctaaaatggcccgagtcatttgatccattacggtttgtgaactatgcaaggcaaaggagatggatcaggaataggaagcaaagtactacgaatcaggaaatatatgttggaactttgaaacctggagataccataccccttcctctatgtgggttgacacaacctggattgtatgtcttgcgtttaaggccttctgatcttagcaatcatgatgagtattcttggagttcagcggtggatgggtctgaacaaccagaagagtctggttcgtcaaaagtatgtcctgagataagtgtatcgtctcttattgagtcagagaaactgttgtattgctcacagataagtagtacttcttcaagtggttcccacaaattgtggttttgtatgagtatacaagcgacagaaattgcaaaagacattcattctgatcctatccaggattggaatcttgtggttaagtccccgctatctatctccaattttcttccccttgcagctgagttttctgttcttgagatgcaagaaaatggtggttttgttgcctgcttcagaggggtgttttttccaggaaagaccgtgaatgtttttagtgctgacataagaaaacctttatacttttcactgcttccacaaagaggatggttgcccatccatgaagctgtccttttgtcccatcctcatgaagtttcatcaaaaacaataaacttgagaagttcgatatctggaaggattgttcaaattattcttgagcagaattccgttgaagagcgtccactgcaggctaagatcattagactctatgctccttattggttttcaattgctaggtgtcctcctctcacattcaggcttgtagatatagaagggaagaaaaatacacgaaagataggtggtttatttcagtctaaaaagattaatgaagttgtcctagaggaaataactgaagaggaaatatatgaaggtcatacaattgcttcagctctgaattttaaaatgctgggccttgctgtgtcgattgatcaatctggcaacaagcagtttggacctgttaaagatctttctccgcttggtgacatggatggatcattggatgtccctgcttatgatggcgaaggcaattgcatgcagctttttattaccacgaaaccatgcctgtatcaatctgttcctacaaaggtaatatctgtccgaccatttatgaccttcaccaacagacttggtcgtgatgtatatatcaagttatgcagcgaggatgaaccaaaagtccttcatccatgtgattcaagaatatcatttgtatatcgtgtatcagatggacctaataaacttcaggttcgattaggagacaccaactggtcgtttcctattcaaattgtaaaagaggacacaatttctcttgttttaaggaggcataatggtactcggacatttttgaggacagaaattcggggatatgaagaaggctcacgtttcatcattgtattccgccttggatcatctaatggtcctatcagaatcgagaacagaactgtcagcaaaacacttagcattcgccagtctgggtttggtgaagatgcgtgggttcctctagaacctttttcaacaacaaattttgcttgggaggacccatatggccaaagattcatagaagctaaggtcgacaatgatctctccactggagtttgggaacttgatttggaaacaacaggcatatgttcttctgaggaactcggattgcaatttcatgttgtagaaattggtgatatcaggatagcaaggttcagtgacaccagaactacagatgcaagtttgcatgaacaaattaggtctctgcagcttgctgaaaattgcggaccttctaacctgcagaatacgaatcagaataatggtgcctcacctcttgagcttataattgagtttggagttgtagggctttcaattatagaccatagaccgaaggaggtctcctacttctattttgagagagtcttcgtatcatattcgacaggctatgatggtgggacgacaagcaggtttaagctcatactgggccacgtgcagctggacaaccaactccctctaacattgatgccagtgttgttggctcctgagccggactctgatatccatcatcctgttgtcaagatgactataacaatgcgtaatgaaaatactgatggcatccaggtctacccttacatttatatccgggtgactgagaagtgttggaggcttaatattcacgaaccaataatttgggctttggtggatctatacaataatctacagttagatcgtctgcctaaaagttctagtgtcacagaagttgatccagaaatacgcatcgacctagtagacatttcagaagttaggctaaaggtgtcactggaaacagcaccagctcagagacctcatggggttctaggagtatggagcccaatactatctgcagttggaaatgcattcaagattcaggtgcatctgaggagggtgatgcacaaagacagattcatgcggagaagttccattgtctctgccattggtaaccgcgtttggagagacttgatccataatcctctacatttgatattttcagttgatgttcttggtatgacaagttcaactttggcttctcttagtaaagggtttgctgagctctcaactgatgggcagtttactcacctacggtcaaaacaggtattttcaaggagaattacgggggtgggtgatggaatcattcaaggcacagaagcatttgtgcaaggtgttgcttttggcgtatctggagtagtgaaaaagccagttgagagtgcaagacagaacggtctgtcaggactttttcacgggattggacgtgcattcctgggagttattgtgcaaccaatgagtggggcattggactttttctccttgactgttgatggaattggagcaagttgttcgaaatgcctagaggtcttcaatagcaagacaacattccagagaattagaaacccccgggcaatccgtgccaatggtatacttacagagtattctgagagagaggcagttggacagatgattttataccttgcagaagcacatcggcactttggttgtactgaaatattcaaggagccctcaaagtttgcttggtctgattattatgaagagcattttgttgtgccttaccagcggattgttttagtgaccaataagcgagtgatgttgcttcagtgtttggctccagacaaaatggacaagaaaccgtgcaagattatgtgggatgtgccttgggaagagcttatggcagtggagttggctaaagcaggtcacaatcagccatctcacttgatcctccacctcaaaagttttaggagatcagagaattttgtccgggtcataaagtgcaatgttgaagatgaagtagagggaagggaaccccaggctgttagaatctgttctgcagcatgtaggatgtggaaagcaaaccagtctgccatgaaaagcctgatgttgaaggttccatcaagtcagcgacatgtgtattttgcctggtctgaagccgaggggagagaaaaacgtactctgaacaaagcagtgactaggctgagagagctcccgtcatacagttctgcatcagatggtagaagatttgttaaacacagcatcaacttttcaaagatttggagcagtgaacaagaatccagaggtcgatgcacattgtgcaaaaagcaggttttggaagatgctggattatgtagcatttggagacccatttgtcctgacgggtatgtctctattggagatattgctcacattggcagccatcctccaaacgttgctgcagtttaccgtaaaattgacaggttgtttgcacttccagttggatacgacctggtgtggacaaattgtttggatgactatgcaacaccagtatcaatttggcatcctagagctccagaaggattcgtatctcctggatgcatagctgtggctggttttgttgagccagaacctgatttggttcactgtgttgctatatcacttgctgaggagacagaatttgaagagcaaaaggtttggtcagcttcagattcttatccatgggcatgtcacatttatcaagtccgcagtgaagctcttcacttcgtggcattaagaacaagcaaggaagaatctgactggaaacctatgaggattcttgatgatcctcagcccctattgcagtcattgaaagagcactag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

1448

Amino Acids

163.49

Weight (kDa)

6.27

Isoelectric Point (pI)

47.42

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2030
AasI GACNNNNNNGTC 3 cut(s) 2943, 3879, 3893
Acc36I ACCTGC 4 cut(s) 1992, 2142, 3419, 3826
AccB1I GGYRCC 1 cut(s) 2009
AccB7I CCANNNNNTGG 1 cut(s) 3008
AccI GTMKAC 5 cut(s) 511, 1779, 2310, 2475, 3139
AccII CGCG 1 cut(s) 2670
AciI CCGC 9 cut(s) 353, 584, 1184, 1606, 1971, 2635, 2668, 3295, 4231
AclI AACGTT 1 cut(s) 3939
AcoI YGGCCR 1 cut(s) 1753
AcsI RAATTY 7 cut(s) 8, 874, 1105, 1563, 1729, 3487, 4163
AcuI CTGAAG 7 cut(s) 652, 1080, 1083, 1433, 3317, 3681, 4176
AcvI CACGTG 1 cut(s) 2176
AdeI CACNNNGTG 2 cut(s) 3825, 4252
AfaI GTAC 5 cut(s) 205, 469, 1540, 3220, 3685
AfiI CCNNNNNNNGG 3 cut(s) 269, 755, 3008
AflIII ACRYGT 1 cut(s) 3640
AjiI CACGTC 1 cut(s) 2975
AjuI GAANNNNNNNTTGG 2 cut(s) 210, 242
AloI GAACNNNNNNTCC 4 cut(s) 837, 869, 1368, 1400
Alw21I GWGCWC 4 cut(s) 2778, 3720, 4060, 4344
AlwNI CAGNNNCTG 1 cut(s) 4118
Ama87I CYCGRG 2 cut(s) 131, 3117
AoxI GGCC 5 cut(s) 128, 308, 1120, 1753, 2170
ApeKI GCWGC 8 cut(s) 614, 1246, 1365, 1954, 2179, 3566, 3924, 3944
ApoI RAATTY 7 cut(s) 8, 874, 1105, 1563, 1729, 3487, 4163
ArsI GACNNNNNNTTYG 4 cut(s) 3956, 3988, 3997, 4029
AseI ATTAAT 1 cut(s) 1035
Asp700I GAANNNNTTC 2 cut(s) 3559, 4242
AspS9I GGNCC 8 cut(s) 129, 1120, 1163, 1436, 1625, 1744, 1973, 2170
AsuC2I CCSGG 4 cut(s) 2330, 3118, 3119, 3497
AsuHPI GGTGA 9 cut(s) 1202, 1318, 1700, 1892, 2007, 2344, 2623, 2792, 2858
AsuII TTCGAA 1 cut(s) 3062
AvaI CYCGRG 2 cut(s) 131, 3117
AvaII GGWCC 5 cut(s) 1163, 1436, 1625, 1744, 1973
BaeI ACNNNNGTAYC 2 cut(s) 4020, 4053
BalI TGGCCA 1 cut(s) 1755
BanI GGYRCC 1 cut(s) 2009
BanII GRGCYC 5 cut(s) 2558, 2778, 3240, 3720, 4060
BarI GAAGNNNNNNTAC 2 cut(s) 457, 489
BbrPI CACGTG 1 cut(s) 2176
BbsI GAAGAC 2 cut(s) 2101, 3070
Bbv12I GWGCWC 4 cut(s) 2778, 3720, 4060, 4344
BbvCI CCTCAGC 2 cut(s) 4152, 4314
BbvI GCAGC 8 cut(s) 626, 1258, 1377, 1966, 2191, 3578, 3931, 3936
BcgI CGANNNNNNTGC 2 cut(s) 3042, 3076
BciVI GTATCC 1 cut(s) 3983
BclI TGATCA 1 cut(s) 1138
BcnI CCSGG 4 cut(s) 2330, 3118, 3119, 3497
BfmI CTRYAG 8 cut(s) 896, 1917, 1952, 1985, 2405, 2568, 3564, 3945
BfuAI ACCTGC 4 cut(s) 1992, 2142, 3419, 3826
BfuI GTATCC 1 cut(s) 3983
BglII AGATCT 1 cut(s) 1174
BisI GCNGC 8 cut(s) 615, 1247, 1366, 1955, 2180, 3567, 3925, 3945
BlpI GCTNAGC 1 cut(s) 2772
BlsI GCNGC 8 cut(s) 616, 1248, 1367, 1956, 2181, 3568, 3926, 3946
BmcAI AGTACT 2 cut(s) 205, 469
Bme18I GGWCC 5 cut(s) 1163, 1436, 1625, 1744, 1973
BmeT110I CYCGRG 2 cut(s) 131, 3117
BmgBI CACGTC 1 cut(s) 2975
BmgT120I GGNCC 8 cut(s) 129, 1120, 1163, 1436, 1625, 1744, 1973, 2170
BmrI ACTGGG 1 cut(s) 2177
BmuI ACTGGG 1 cut(s) 2177
BpiI GAAGAC 2 cut(s) 2101, 3070
BplI GAGNNNNNCTC 2 cut(s) 2222, 2254
BpmI CTGGAG 6 cut(s) 90, 264, 1818, 2925, 3330, 4044
Bpu10I CCTNAGC 4 cut(s) 1773, 2229, 4152, 4314
Bpu1102I GCTNAGC 1 cut(s) 2772
Bpu14I TTCGAA 1 cut(s) 3062
BpuEI CTTGAG 4 cut(s) 653, 847, 887, 2042
BpuMI CCSGG 4 cut(s) 2330, 3118, 3119, 3497
BsaAI YACGTR 1 cut(s) 2176
BsaBI GATNNNNATC 4 cut(s) 564, 2247, 4072, 4200
BsaI GGTCTC 4 cut(s) 1953, 2089, 2521, 3865
BsaJI CCNNGG 8 cut(s) 1609, 2983, 3116, 3117, 3392, 3543, 3666, 4205
BsaXI ACNNNNNCTCC 4 cut(s) 2979, 3009, 3011, 3041
Bsc4I CCNNNNNNNGG 3 cut(s) 269, 755, 3008
Bse3DI GCAATG 1 cut(s) 3517
Bse8I GATNNNNATC 4 cut(s) 564, 2247, 4072, 4200
BseDI CCNNGG 8 cut(s) 1609, 2983, 3116, 3117, 3392, 3543, 3666, 4205
BseJI GATNNNNATC 4 cut(s) 564, 2247, 4072, 4200
BseLI CCNNNNNNNGG 3 cut(s) 269, 755, 3008
BseMI GCAATG 1 cut(s) 3517
BseRI GAGGAG 3 cut(s) 945, 2620, 4169
BseXI GCAGC 8 cut(s) 626, 1258, 1377, 1966, 2191, 3578, 3931, 3936
BseYI CCCAGC 3 cut(s) 36, 93, 1117
BsgI GTGCAG 1 cut(s) 2198
Bsh1236I CGCG 1 cut(s) 2670
BshFI GGCC 5 cut(s) 130, 310, 1122, 1755, 2172
BshNI GGYRCC 1 cut(s) 2009
BsiHKAI GWGCWC 4 cut(s) 2778, 3720, 4060, 4344
BsiHKCI CYCGRG 2 cut(s) 131, 3117
BsiSI CCGG 4 cut(s) 2234, 2329, 3118, 3496
BslFI GGGAC 4 cut(s) 565, 775, 1199, 2155
BslI CCNNNNNNNGG 3 cut(s) 269, 755, 3008
BsmBI CGTCTC 1 cut(s) 426
BsmFI GGGAC 4 cut(s) 565, 775, 1199, 2155
BsmI GAATGC 3 cut(s) 1668, 2582, 2978
BsnI GGCC 5 cut(s) 130, 310, 1122, 1755, 2172
Bso31I GGTCTC 4 cut(s) 1953, 2089, 2521, 3865
BsoBI CYCGRG 2 cut(s) 131, 3117
Bsp119I TTCGAA 1 cut(s) 3062
Bsp1286I GDGCHC 6 cut(s) 2558, 2778, 3240, 3720, 4060, 4344
Bsp1720I GCTNAGC 1 cut(s) 2772
Bsp19I CCATGG 1 cut(s) 4205
BspACI CCGC 9 cut(s) 353, 584, 1184, 1606, 1971, 2635, 2668, 3295, 4231
BspANI GGCC 5 cut(s) 130, 310, 1122, 1755, 2172
BspFNI CGCG 1 cut(s) 2670
BspHI TCATGA 2 cut(s) 328, 799
BspMAI CTGCAG 6 cut(s) 900, 1956, 1989, 2572, 3568, 3949
BspMI ACCTGC 4 cut(s) 1992, 2142, 3419, 3826
BspQI GCTCTTC 5 cut(s) 879, 3264, 3393, 4164, 4248
BspT104I TTCGAA 1 cut(s) 3062
BspT107I GGYRCC 1 cut(s) 2009
BspTNI GGTCTC 4 cut(s) 1953, 2089, 2521, 3865
BsrDI GCAATG 1 cut(s) 3517
BssECI CCNNGG 8 cut(s) 1609, 2983, 3116, 3117, 3392, 3543, 3666, 4205
BssNAI GTATAC 2 cut(s) 512, 3140
BssT1I CCWWGG 3 cut(s) 1609, 3392, 4205
Bst1107I GTATAC 2 cut(s) 512, 3140
Bst6I CTCTTC 7 cut(s) 372, 879, 1059, 3264, 3393, 4164, 4248
BstAPI GCANNNNNTGC 2 cut(s) 3128, 3825
BstBAI YACGTR 1 cut(s) 2176
BstBI TTCGAA 1 cut(s) 3062
BstC8I GCNNGC 4 cut(s) 664, 900, 1244, 1959
BstDSI CCRYGG 1 cut(s) 4205
BstEII GGTNACC 1 cut(s) 2663
BstFNI CGCG 1 cut(s) 2670
BstMWI GCNNNNNNNGC 7 cut(s) 307, 895, 3128, 3292, 3715, 3825, 4324
BstNSI RCATGY 4 cut(s) 1246, 3573, 3644, 4215
BstPI GGTNACC 1 cut(s) 2663
BstSFI CTRYAG 8 cut(s) 896, 1917, 1952, 1985, 2405, 2568, 3564, 3945
BstUI CGCG 1 cut(s) 2670
BstV1I GCAGC 8 cut(s) 626, 1258, 1377, 1966, 2191, 3578, 3931, 3936
BstV2I GAAGAC 2 cut(s) 2101, 3070
BstX2I RGATCY 2 cut(s) 1174, 2389
BstXI CCANNNNNNTGG 2 cut(s) 36, 2376
BstYI RGATCY 2 cut(s) 1174, 2389
BstZ17I GTATAC 2 cut(s) 512, 3140
BsuI GTATCC 1 cut(s) 3983
BsuRI GGCC 5 cut(s) 130, 310, 1122, 1755, 2172
BtgI CCRYGG 1 cut(s) 4205
BtrI CACGTC 1 cut(s) 2975
BtsI GCAGTG 7 cut(s) 81, 740, 893, 3417, 3705, 3799, 4240
BveI ACCTGC 4 cut(s) 1992, 2142, 3419, 3826
Cac8I GCNNGC 4 cut(s) 664, 900, 1244, 1959
CaiI CAGNNNCTG 1 cut(s) 4118
CciI TCATGA 2 cut(s) 328, 799
Cfr13I GGNCC 8 cut(s) 129, 1120, 1163, 1436, 1625, 1744, 1973, 2170
Cfr9I CCCGGG 1 cut(s) 3117
CseI GACGC 1 cut(s) 878
CsiI ACCWGGT 1 cut(s) 3996
Csp6I GTAC 5 cut(s) 204, 468, 1539, 3219, 3684
CviQI GTAC 5 cut(s) 204, 468, 1539, 3219, 3684
DraI TTTAAA 1 cut(s) 1111
DraIII CACNNNGTG 2 cut(s) 3825, 4252
DrdI GACNNNNNNGTC 3 cut(s) 2943, 3879, 3893
DseDI GACNNNNNNGTC 3 cut(s) 2943, 3879, 3893
EaeI YGGCCR 1 cut(s) 1753
Eam1104I CTCTTC 7 cut(s) 372, 879, 1059, 3264, 3393, 4164, 4248
EarI CTCTTC 7 cut(s) 372, 879, 1059, 3264, 3393, 4164, 4248
EciI GGCGGA 1 cut(s) 1595
Ecl136II GAGCTC 3 cut(s) 2776, 3718, 4058
Eco130I CCWWGG 3 cut(s) 1609, 3392, 4205
Eco147I AGGCCT 1 cut(s) 310
Eco24I GRGCYC 5 cut(s) 2558, 2778, 3240, 3720, 4060
Eco31I GGTCTC 4 cut(s) 1953, 2089, 2521, 3865
Eco32I GATATC 3 cut(s) 840, 1885, 2245
Eco47I GGWCC 5 cut(s) 1163, 1436, 1625, 1744, 1973
Eco53kI GAGCTC 3 cut(s) 2776, 3718, 4058
Eco57I CTGAAG 7 cut(s) 652, 1080, 1083, 1433, 3317, 3681, 4176
Eco72I CACGTG 1 cut(s) 2176
Eco88I CYCGRG 2 cut(s) 131, 3117
Eco91I GGTNACC 1 cut(s) 2663
EcoICRI GAGCTC 3 cut(s) 2776, 3718, 4058
EcoO109I RGGNCCY 1 cut(s) 1744
EcoO65I GGTNACC 1 cut(s) 2663
EcoRI GAATTC 1 cut(s) 874
EcoRV GATATC 3 cut(s) 840, 1885, 2245
EcoT14I CCWWGG 3 cut(s) 1609, 3392, 4205
EcoT22I ATGCAT 2 cut(s) 2584, 4088
EcoT38I GRGCYC 5 cut(s) 2558, 2778, 3240, 3720, 4060
ErhI CCWWGG 3 cut(s) 1609, 3392, 4205
Esp3I CGTCTC 1 cut(s) 426
FalI AAGNNNNNCTT 8 cut(s) 454, 486, 712, 744, 768, 800, 2728, 2760
FaqI GGGAC 4 cut(s) 565, 775, 1199, 2155
FauI CCCGC 1 cut(s) 591
FauNDI CATATG 2 cut(s) 1750, 1832
FbaI TGATCA 1 cut(s) 1138
FblI GTMKAC 5 cut(s) 511, 1779, 2310, 2475, 3139
Fnu4HI GCNGC 8 cut(s) 615, 1247, 1366, 1955, 2180, 3567, 3925, 3945
FriOI GRGCYC 5 cut(s) 2558, 2778, 3240, 3720, 4060
Fsp4HI GCNGC 8 cut(s) 615, 1247, 1366, 1955, 2180, 3567, 3925, 3945
GluI GCNGC 8 cut(s) 615, 1247, 1366, 1955, 2180, 3567, 3925, 3945
GsaI CCCAGC 3 cut(s) 40, 97, 1121
GsuI CTGGAG 6 cut(s) 90, 264, 1818, 2925, 3330, 4044
HaeIII GGCC 5 cut(s) 130, 310, 1122, 1755, 2172
HapII CCGG 4 cut(s) 2234, 2329, 3118, 3496
HgaI GACGC 1 cut(s) 878
HincII GTYRAC 2 cut(s) 276, 1780
HindII GTYRAC 2 cut(s) 276, 1780
HpaII CCGG 4 cut(s) 2234, 2329, 3118, 3496
HphI GGTGA 9 cut(s) 1202, 1318, 1700, 1892, 2007, 2344, 2623, 2792, 2858
HpyCH4IV ACGT 5 cut(s) 1588, 2175, 2974, 3682, 3939
HpyF10VI GCNNNNNNNGC 7 cut(s) 307, 895, 3128, 3292, 3715, 3825, 4324
HpySE526I ACGT 5 cut(s) 1588, 2175, 2974, 3682, 3939
Ksp22I TGATCA 1 cut(s) 1138
LguI GCTCTTC 5 cut(s) 879, 3264, 3393, 4164, 4248
Lsp1109I GCAGC 8 cut(s) 626, 1258, 1377, 1966, 2191, 3578, 3931, 3936
MabI ACCWGGT 1 cut(s) 3996
MaeII ACGT 5 cut(s) 1588, 2175, 2974, 3682, 3939
MfeI CAATTG 3 cut(s) 939, 1089, 1237
MflI RGATCY 2 cut(s) 1174, 2389
MhlI GDGCHC 6 cut(s) 2558, 2778, 3240, 3720, 4060, 4344
MlsI TGGCCA 1 cut(s) 1755
MluNI TGGCCA 1 cut(s) 1755
MlyI GAGTC 6 cut(s) 143, 389, 440, 909, 2115, 2231
MmeI TCCRAC 6 cut(s) 208, 1333, 2327, 2554, 3151, 3967
Mox20I TGGCCA 1 cut(s) 1755
Mph1103I ATGCAT 2 cut(s) 2584, 4088
MroXI GAANNNNTTC 2 cut(s) 3559, 4242
MscI TGGCCA 1 cut(s) 1755
MslI CAYNNNNRTG 4 cut(s) 798, 1395, 4091, 4210
Msp20I TGGCCA 1 cut(s) 1755
MspA1I CMGCKG 4 cut(s) 353, 617, 2182, 3295
MspI CCGG 4 cut(s) 2234, 2329, 3118, 3496
MunI CAATTG 3 cut(s) 939, 1089, 1237
Mva1269I GAATGC 3 cut(s) 1668, 2582, 2978
MvnI CGCG 1 cut(s) 2670
MwoI GCNNNNNNNGC 7 cut(s) 307, 895, 3128, 3292, 3715, 3825, 4324
NciI CCSGG 4 cut(s) 2330, 3118, 3119, 3497
NcoI CCATGG 1 cut(s) 4205
NdeI CATATG 2 cut(s) 1750, 1832
NmeAIII GCCGAG 1 cut(s) 3691
NmuCI GTSAC 9 cut(s) 1190, 1904, 2332, 2437, 2502, 3307, 3431, 3700, 4214
NsiI ATGCAT 2 cut(s) 2584, 4088
NspI RCATGY 4 cut(s) 1246, 3573, 3644, 4215
NspV TTCGAA 1 cut(s) 3062
PaeI GCATGC 1 cut(s) 1246
PagI TCATGA 2 cut(s) 328, 799
PceI AGGCCT 1 cut(s) 310
PciI ACATGT 1 cut(s) 3640
PciSI GCTCTTC 5 cut(s) 879, 3264, 3393, 4164, 4248
PctI GAATGC 3 cut(s) 1668, 2582, 2978
PdmI GAANNNNTTC 2 cut(s) 3559, 4242
PflFI GACNNNGTC 1 cut(s) 1338
PflMI CCANNNNNTGG 1 cut(s) 3008
PfoI TCCNGGA 3 cut(s) 555, 685, 4078
PkrI GCNGC 8 cut(s) 616, 1248, 1367, 1956, 2181, 3568, 3926, 3946
PleI GAGTC 6 cut(s) 142, 388, 439, 909, 2114, 2231
PmaCI CACGTG 1 cut(s) 2176
PmlI CACGTG 1 cut(s) 2176
PpsI GAGTC 6 cut(s) 142, 388, 439, 909, 2114, 2231
Ppu21I YACGTR 1 cut(s) 2176
PpuMI RGGWCCY 1 cut(s) 1744
PscI ACATGT 1 cut(s) 3640
PshBI ATTAAT 1 cut(s) 1035
PsiI TTATAA 1 cut(s) 2030
Psp124BI GAGCTC 3 cut(s) 2778, 3720, 4060
Psp1406I AACGTT 1 cut(s) 3939
Psp5II RGGWCCY 1 cut(s) 1744
PspCI CACGTG 1 cut(s) 2176
PspEI GGTNACC 1 cut(s) 2663
PspFI CCCAGC 3 cut(s) 36, 93, 1117
PspPI GGNCC 8 cut(s) 129, 1120, 1163, 1436, 1625, 1744, 1973, 2170
PspPPI RGGWCCY 1 cut(s) 1744
PsrI GAACNNNNNNTAC 2 cut(s) 2722, 2754
PstI CTGCAG 6 cut(s) 900, 1956, 1989, 2572, 3568, 3949
PstNI CAGNNNCTG 1 cut(s) 4118
PsuI RGATCY 2 cut(s) 1174, 2389
PsyI GACNNNGTC 1 cut(s) 1338
PvuII CAGCTG 2 cut(s) 617, 2182
RsaI GTAC 5 cut(s) 205, 469, 1540, 3220, 3685
RsaNI GTAC 5 cut(s) 204, 468, 1539, 3219, 3684
RseI CAYNNNNRTG 4 cut(s) 798, 1395, 4091, 4210
SacI GAGCTC 3 cut(s) 2778, 3720, 4060
SalI GTCGAC 1 cut(s) 1778
SapI GCTCTTC 5 cut(s) 879, 3264, 3393, 4164, 4248
SatI GCNGC 8 cut(s) 615, 1247, 1366, 1955, 2180, 3567, 3925, 3945
Sau96I GGNCC 8 cut(s) 129, 1120, 1163, 1436, 1625, 1744, 1973, 2170
ScaI AGTACT 2 cut(s) 205, 469
SchI GAGTC 6 cut(s) 143, 389, 440, 909, 2115, 2231
SduI GDGCHC 6 cut(s) 2558, 2778, 3240, 3720, 4060, 4344
SexAI ACCWGGT 1 cut(s) 3996
SfcI CTRYAG 8 cut(s) 896, 1917, 1952, 1985, 2405, 2568, 3564, 3945
SfuI TTCGAA 1 cut(s) 3062
SinI GGWCC 5 cut(s) 1163, 1436, 1625, 1744, 1973
SmaI CCCGGG 1 cut(s) 3119
SmiMI CAYNNNNRTG 4 cut(s) 798, 1395, 4091, 4210
SmlI CTYRAG 4 cut(s) 632, 826, 866, 2021
SmoI CTYRAG 4 cut(s) 632, 826, 866, 2021
SphI GCATGC 1 cut(s) 1246
SseBI AGGCCT 1 cut(s) 310
SsiI CCGC 9 cut(s) 353, 584, 1184, 1606, 1971, 2635, 2668, 3295, 4231
SspI AATATT 2 cut(s) 2359, 3228
SstI GAGCTC 3 cut(s) 2778, 3720, 4060
StuI AGGCCT 1 cut(s) 310
StyI CCWWGG 3 cut(s) 1609, 3392, 4205
TaiI ACGT 5 cut(s) 1591, 2178, 2977, 3685, 3942
TaqI TCGA 9 cut(s) 836, 1133, 1456, 1638, 1779, 2123, 2466, 3062, 3814
TaqII GACCGA 1 cut(s) 2089
TatI WGTACW 3 cut(s) 203, 467, 3218
TseFI GTSAC 9 cut(s) 1190, 1904, 2332, 2437, 2502, 3307, 3431, 3700, 4214
TseI GCWGC 8 cut(s) 614, 1246, 1365, 1954, 2179, 3566, 3924, 3944
Tsp45I GTSAC 9 cut(s) 1190, 1904, 2332, 2437, 2502, 3307, 3431, 3700, 4214
TspGWI ACGGA 2 cut(s) 868, 3116
TspMI CCCGGG 1 cut(s) 3117
Tth111I GACNNNGTC 1 cut(s) 1338
Van91I CCANNNNNTGG 1 cut(s) 3008
VpaK11BI GGWCC 5 cut(s) 1163, 1436, 1625, 1744, 1973
VspI ATTAAT 1 cut(s) 1035
XapI RAATTY 7 cut(s) 8, 874, 1105, 1563, 1729, 3487, 4163
XbaI TCTAGA 1 cut(s) 1708
XceI RCATGY 4 cut(s) 1246, 3573, 3644, 4215
XcmI CCANNNNNNNNNTGG 4 cut(s) 39, 756, 1682, 4041
XmaI CCCGGG 1 cut(s) 3117
XmiI GTMKAC 5 cut(s) 511, 1779, 2310, 2475, 3139
XmnI GAANNNNTTC 2 cut(s) 3559, 4242
ZrmI AGTACT 2 cut(s) 205, 469
Zsp2I ATGCAT 2 cut(s) 2584, 4088
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.