Rmu_sc0004647.1_g000014

Vacuolar protein sorting-associated protein

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004647.1
Physical Location & Seq
Forward (+)
52432 .. 96917
44486 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004647.1_g000014.1.cds

Sequence Viewer

Length: 14763 bp
atgatgaccatgatggatcttgcattaaggattttgctaggggtgggcacggttcgggccggctcggttttgggcccaacccgttttcgaaccgtccatttcggttggcccaaatctcaaccggcagcccgattcattttcaaatgggccgatatgttcggttgggccgaaaatgctgttcggtccaggtttcacggttcatcttgggatctaaaatcacgtgagggagtgatgtgggcacatggtcacgcgcaactgaccccagatggcaataatgctaatccccccttcccgattttttccaaaataggcataatcgcatatgccccaaaacgacgtcactccgaccctccttgtcccaaagccccaatctcctacttccctccacccgcacagtccaactgccacccgacagtcctatgcctttcatttccttgcggcccacgtcagtccccatcacacgcgtcgacgttttattcgtccagggatttccggccggcgaagatgttggaggatcaggtggcgaacctcttgcagaggtacctggggaactacgtgaagggactcaataaagaggccctcaagatcagtgtctggcaaggtgatgtggagctaacaaatatgcagttgaagccagaggcactgaatgccttaaaactacctgtgaaggtcaaggcaggatttcttggatcagtgaaacttaaggttccatggagcaggcttggccaggatccagtgttagtttctttggatcgcatttttctattagctgagcctgaaacgcaagttgagggaagtagtgaggatgctgtacaggaaactaagaaaaaccgagtgcaggaaatggaaatgaagttgttggagaaggcgcaacaactgaagtcagatgtgaataaatcatggttgggatccctgatcagcacaataattggaaatttgaaactttcaatttcaaatattcacatcagatacgaggatcttgagagcaattttggtcatccgtttgcagcgggcataaccttggagagactttcagccatgacagttgatgatactggaaaagagacatttgttactgggggtgcactgaactgtattcagaagtctgtcgaacttgatcggcttgcactatatctggattctgatattgctccatggcatgttaacaagcaatgggaggatttgcttccatcagagtgggtccaggtttttaaatttggtactaaagatggtaaaccagcgaataaatcgaccaagaagcatacttatgtattggaacctgtttctggaagtgctaagtattcaaagctacgacaaaatgaatttgctgatagtggtcggcctttacataaagcagcagttaatctggatgatgtgactatctgtttgccaaaggacggatacagggatgtactgaagttagctgataactttgctgccttcaatcagcggttgaagtatgctcattatcgtccacatgtctctgtaaaatctgatcctaggtcttggtggaagtatgcttacagagttgtttctgaccaaatgaagaaggcaagtgggaaactgtcatgggagcaagttctgaagtatgcaagattacgtaaaagatatatatctctatatgcttcgctgcttagatctgaccctagtcgggcagtggttgaagataacaaagacattgaagaactagatcgtgaacttgatattgaacttatactgcagtggaggatgttggctcacaagtttgtagagcagtcattagagtcagaacatgactcgaggaaacaaaaagcaaagaaatcttggtggtctggatggggcagtcagtctctgaaagatgagaatgagccatttagtttcactgatgaagactggaagcagttaaatgaaatcatcggttataaggaaagtgatgatagactgttggttacagttgatgaaaagatggatgctcttcagacttccttgatcatttctatgaaacgtaatgccactaagcttattgatgagtctcaggagtgtcttgctgaattatcgtgtgaaggcatcggttgctcaataaagctctatccagaaacaaaagtttttgacctgaacttgggatcatataagttatcaacgccaaacggtctccttgctgagagtgcaagtgcttatgattctttagttggcgtgttctgtttcaagccttttgacaccaaggtggactggagctttgttgctaaggcttctccctgttatgtgacttatctaaaggatgcaattgatcaaattataaagttttttcggagtaatacagttagtcagaagatagctatggatactgcagctgcagtgcagatgacaattgatggagtcaagcgcacagctcagcaacaagtgaaccgggcattgaaggaccattccaggttttataatttttgttttgctaatgtaatcgatggagtcaagcgcacagctcagcaacaagtgaaccgggcattgaaggaccattccaggtttttgttggacttggatatcgcggctcctaagattaccattcctactgacttttgtcccgacaatattcatccaacaaaactgatgctggacttgggaaatttggttattggtaccaaggatgactatgagcatggatcattgaaggagcaagatatgtatctgcagtttaatttggttctaagtgatgtatctgcttttttggttgatggtgactactgttggggcaaatctcctgcaaaaaattctgctggttcttccaactcagatggtgttagtttgttgccttttattgataagtgtggggtaattctaacgtttcaacagattagattagagagtccatcctatcctgcaacacgactagctgtacgggtgccatcgttggggtttcacttctccccagctcggtatcatcgattgatgcaagtagttaagatctttaaggaggaggatagtgagacgtcagatctcgttggcccttggaatcaagctgactttgaggggtggtcggctcttcttgttttcaagggtctgggaaatagggaagcagtgtggcagcggcgctacctatgcttagttggccctttcctttatgtacttgagagccctagctcaaaatcgtacaagcaatgtatcagcttacaagggaaacacatatatgaggttcccccagagtctgttggtgataccgatcttgttttggctgtctgtgattctacacgagcgaataacaaggtcgtggaggatgcaaatgcactaatcttgctatttgattctgatgattcaaagaaaacttggcacagccggttgcggggggctgtctatcatgcatcagcgtctgctcctgtaactggtctatccgatacttcgtcagaatctgaggattcagtaatggagcttaatggaaatcctgatatgggtgatttatcaaaaatggagaagatattcataactggtgttcttgatgaactaaaggtctgcgtcagttatagttatcagcgtgaccaaaatatcatgaaggtgctcctaactgaagaaaggcgcttatttgaacttcgagcgataggtggtcaggttgaggtatcagttagatcgagtgacatctttattggaactgttttaaaatctttggagattgaagacttggtttctgggcacaccctctcccagccgcgttatctggcaagatcattcatccatagtgcagaaacacttataacctctgatgccccaggaaatcagagttttgatggttctggttcaattcgtttggaaggcgatgataaattctatgaggcaacagataatttggtcgactctggaaatttgatattgaaatctcctagttttactcgtattgctggtctactcccaagtgatggagttcaaacaacaaacgacattgcactcgatgattcaatggatagctttgtgaaagctcaagtagttatctatgaccagaactctcctctgtatcataatatggatatgcaggtcacagtcaccctggctaccttatcatttttctgtcgtcgaccaacaattcttgcaataatggaatttgcaaattctattaccatcaaggatgaaagctgtgaagctttcagtgacagttcttcaacaacagctacgaatcatgacaccagagatgatgcagtggatggttcgcaatcaatggcagtcagcaagcctgctgttaaaggattgctgggaaaggggaagtccagagttgtatttaatataacattaaatatggcccgtgctcagattttattaatgaatgaggatgaaactaaacttgctgttctgtcacaagataatttacttacggatattaaggtatttccatcctcttttagtattaaggcatccctcggaaatcttaaggtaagtgatgagagtcttccaagcagccatatgtatttctgggcgtgcgatatgagaaatccaggaggcagctcatttgttgaggtcacagtcaccctggctaccttatcatttttctgtcgtcgaccaacaattcttgcaataatggaatttgcaaattctattaccatcaaggatgaaagctgtgaagctttcagtgacagttcttcaacaacagctacgaatcatgacaccagagatgatgcagtggatggttcgcaatcaatggcagtcagcaagcctgctgttaaaggattgctgggaaaggggaagtccagagttgtatttaatataacattaaatatggcccgtgctcagattttattaatgaatgaggatgaaactaaacttgctgttctgtcacaagataatttacttacggatattaaggtatttccatcctcttttagtattaaggcatccctcggaaatcttaaggtaagtgatgagagtcttccaagcagccatatgtatttctgggcgtgcgatatgagaaatccaggaggcagctcatttgttgagttggttttcacttcatttagtgccgatgatgaagactttgaaggttatgagtatagcctctatggtcagctctcagaagtacgcattgtatatttgaatcgatttatccaggagattgttagttatttcatgggtcttgttcccaaaaactcaaaaggagtcgtgaagctaaaagatcaagtaacaaattcagagaagtggtttacaactagtgattttgaaggatcacctgctataaagttggatctgtctctgaggaagcctattatattgatgcccaggagaacggacagtcttgactacttgaagcttgacattgttcatattactgtgaagagcacctctcaatggtttggtggaagcagaactacgaatcatgacaccagagatgatgcagtggatggttcgcaatcaatggcagtcagcaagcctgctgttaaaggattgctgggaaaggggaagtccagagttgtatttaatataacattaaatatggcccgtgctcagattttattaatgaatgaggatgaaactaaacttgctgttctgtcacaagataatttacttacggatattaaggtatttccatcctcttttagtattaaggcatccctcggaaatcttaaggtaagtgatgagagtcttccaagcagccatatgtatttctgggcgtgcgatatgagaaatccaggaggcagctcatttgttgagttggttttcacttcatttagtgccgatgatgaagactttgaaggttatgagtatagcctctatggtcagctctcagaagtacgcattattgttagttatttcatgggtcttgttcccaaaaactcaaaaggagtcgtgaagctaaaagatcaagtaacaaattcagagaagtggtttacaactagtgattttgaaggatcacctgctataaagttggatctgtctctgaggaagcctattatattgatgcccaggagaacggacagtcttgactacttgaagcttgacattgttcatattactgtgaagagcacctctcaatggtttggtggaagcagaagtgatattaatgctgttcatatggaagtattaacagttcaggttgaggatatcaatttgaatgttggttgtaaaggagaaataggtgaaagcataattcaagatgtgaagggagtatctgttgtgattcagaggtcacttagagacttgatgcatcaaataccaaatgttgaggttctaatcaagatggagaaattgaaggcagctttgtcaaacagggaataccagattattaccgattgtgctcagtctaatgtttctgaaactccacatactgtgcctccattgaaccttgattctgtgacatctttaagtgagggtgaagccatcactcaggatccaaatggtactgcttttccaattgcaagtggggaagcccgggtcatgatgaaagtttgtgtcgtcattgatttggttgaattgtgcttacatactggtctagggagtcttgccactgtgcaggttgaggatatcaatttgaatgttggttgtaaaggagaaataggtgaaagcataattcaagatgtgaagggagtatctgttgtgattcagaggtcacttagagacttgatgcatcaaataccaaatgttgaggttctaatcaagatggagaaattgaaggcagctttgtcaaacagggaataccagattattaccgattgtgctcagtctaatgtttctgaaactccacatactgtgcctccattgaaccttgattctgtgacatctttaagtgagggtgaagccatcactcaggatccaaatggtactgcttttccaattgcaagtggggaagcccgggtcatgatgaaagtttgtgtcgtcattgatttggttgaattgtgcttacatactggtctagggagtcttgccactgtgcaggttactggtgtatggctactctacaagacaaataccctgggggaaggtttcctgtcagcaacactcaagggtttcactgttcttgatgatcgtgacggtactaaagaagagtttaggttggcgataggaaagcctgagaatattggttcttgttccgtagattctgtgacttatgatgacacccagcacatcactgatggaaatgtcggaaacttgaatgatatcaatttagttcctacaatgctcattgtcgatgccaaattttgccagcttttaacatctgtttcattatgcatccaaaggccacaacttcttgttgcacttgattttctgctggctgttgctgagttttttgttcctacagtcactgatgcgctgtcaactgaagaagtaaagaactctgtttatggaattgatgcaataattttgaaccagtccacttacaagcaaccctccactgaattatctctcactccattaagacctttggtagttgatgatgaaatatatgatcattttgtttatgatggtaatggtggaatattgcatttgaaagataggcgggggtcctatgtctctgggcctagtacagaggctattatatacataggagatgggaaaagattgcaattcaaaaatgttgttatcaagaatgggctgtacttagattcatgtatatccatgggaagcaacagtagctattcagctttaaaggaagatcaagtctactttgcgggagaggatgaagttcctaatttgagttcctcaagagaaagtcccaataatctgccatctcaaagcattgcagtcaacaaatcaacggaatttatcattgagttgcaggtggttggcccagagctgacattttataatacatccgaaaaacttggggaatcactgatgctctctaaccaacttttacatgctcaattggatggattctgcaggcttgttttgaaaggcgatgccattgagatgaatgcaaatgtgcttggtttcactatggagagtaacggaataaggattttggagccttttgatacttctgtaaaatattctaatgcttctggaaggaccaatatacatatatctgtttcagatatatttatgaatttttcattcagcatcctaaggctgtttttagcagttgaagaggatattttggcttttttaagcacgacctcaaagaaaataacagtagtctgctcgcagtttgacaagattggaacaatagaagatccctccagtgaccaaatatatgccctttggagacctcatgcacctcctggttttgcagttcttggggattatctgacaccattggacaagccacctacaaaggcagttgttgctgtaaataccaatttttccagagtgaagaagcccctatcttacaaactaatttggccacctttaccttctggggagttgtctcttgatggtgtaaatgatttggatgcaataccaagtggtgtcctttctgatgaaagtagctgctccatttggtttcctgaagcgcctgctggatacgttgcattgggctgtgtggtttgtcctggaagagcacaaccaccattatcttctgctttttgtatctcggcttcattagtttctccttgttccctgagggactgcattgcaattaacaccaacgatccatatcagtcaagtttagcattctggcgagtggataattctgttgggacctttttgccggcagatcttagtacttctagcatcacaggtagagcgtatgatttgcgtcacatcatatttggatttcctgaaccctctgcaaaatcatccaatagtttgaatgcccatacttcttctcaaagtcacaatccgcagtcagaaagatcagcaacagtaaactctggtcgccggtatgaagctgttgctagttttcgtttgatatggtggaaccaagggtcaaattcaagaaaaaggctatcgatatggcgtccagttgttcctccgggaatgatatactttggtgatattgcagtgaaagggtatgaacctccaaatacctgcattgttcttcatgatactgaagatgaagagctttttaaagcccctcttgattaccaaattgttgggcaaattaaaaaacagaggggaatggagagtgtgtccttttggcttcctcaagctcccccagggtttgtttcccttggttgtattgcatgtaagggaacacctaagcaatctgatttcagctcattaagatgcattcgcagtgatttggtaactggggatgaatttttagaggagagtatatgggatacatctgatgccaagcttacgaaagattcattcagtgtatgggcagttggcaatgagttgagtacctttctagttcgtggtggtttgaagaaacctcctagaaggtttgctttaaaactggctgattctaatgtaccaactggttcagatcttactgtaatagatgcggaaattagaaccttttctgcagcactttttgatgactatggtggcttgatggttccattgtgtaatttgtctttaagtggaattgggttcggtttgcatggaagaacagactacttgaattcgactgtgagcttctctttggctgctagatcatataatgataagtatgaggtttgggagcctcttgttgagccggtagatggattcctaagataccaatatgatctcaatgcaccaagtgcaacatctcagttacgcgttacatcgactagggatctgaacttgaacgtttctgtgtctaatgctaatatgataattcaagcttatgcaagctggaacagtctcgttcatgtgcctgaatatcataaaaaaagggaagcattctctccaacagacggtgaacgatctgttattgacatccatcacaggagaaactacgatataatcccacaaaacaagctaggtcaggatatctttattcgagctactgagtcaagaggacttacaagcataattaagatgtcatctggagatgtgaggcctgtaaaagttcctgtttccaagaatatgttggattctcatttgaaaggaaaacttttccacaaagttagaacaatggtgactttcatcatagtggatgggcagttcccacgggttagagggttgacatctccccattataccttagcaatccgtctcattcctgaccagagtctccctagtgaaacagtgattcaccaacaaaatgcgcgcacttgcggaagcagctcgaatcacctctctccagagcttgagttggtcaaatggaatgaaatatttttctttaaagttgacgctccagactactactcagttgaattacttgtgacggacatggggaaagagcataaatatatgaaaactgtgtttgatagacgtcatagaacaagtcagccatgcccttgttacttcccacgggttagagggttgacatctccccattataccttagcaatccgtctcattcctgaccagagtctccctagtgaaacagtgattcaccaacaaaatgcgcgcacttgcggaagcagctcgaatcacctctctccagagcttgagttggtcaaatggaatgaaatatttttctttaaagttgacgctccagactactactcagttgaattacttgtgacggacatggggaaaggggtccctcttggattcttttcagcccctctaaagcagattgtggggaattttaatcatgattcatatccatatgataatgtaaagaagtggacatccattgaattgtcctcggcagagtctatggatgataaccataagaaattgggtgggaaaatcagatgtgctgtattgctgtcaccaagatctgaaggagagataagtgatcaatatgataacagtaaaacaaaatctggatttatccagatcagtccgagaagggaaggaccttggactactgtgaggctaaactatgctgccccagctgcttgttggcggttaggcaatgatgttgttgctagtgaagtacgtgtaagggatggcaatagatatgtgaatattaggtctcttgtttcagtacgtaacagtaccgattttgtgcttgatttgtgtcttgtaccgaatgtttctatggaaaacgtgagtttaacagacaattcaagtactcccgagggtttacagacccatagcaacaaatttcagacagatgagttccttgaaactgaaaagtgcagcccgaccactggctgggttggctccatgattcaaccaagccaagatatgattgaaggtggaggatcccatcaggaatttcctacagttgagttaccaccaggctgggaatgggttgatgattggcatttggatatggcatctattgacactgctgatggctgggtctatgctccagatattgaaagtctaaaatggcccgagtcatttgatccattacggtttgtgaactatgcaaggcaaaggagatggatcaggaataggaagcaaagtactacgaatcaggaaatatatgttggaactttgaaacctggagataccataccccttcctctatgtgggttgacacaacctggattgtatgtcttgcgtttaaggccttctgatcttagcaatcatgatgagtattcttggagttcagcggtggatgggtctgaacaaccagaagagtctggttcgtcaaaagtatgtcctgagataagtgtatcgtctcttattgagtcagagaaactgttgtattgctcacagataagtagtacttcttcaagtggttcccacaaattgtggttttgtatgagtatacaagcgacagaaattgcaaaagacattcattctgatcctatccaggattggaatcttgtggttaagtccccgctatctatctccaattttcttccccttgcagctgagttttctgttcttgagatgcaagaaaatggtggttttgttgcctgcttcagaggggtgttttttccaggaaagaccgtgaatgtttttagtgctgacataagaaaacctttatacttttcactgcttccacaaagaggatggttgcccatccatgaagctgtccttttgtcccatcctcatgaagtttcatcaaaaacaataaacttgagaagttcgatatctggaaggattgttcaaattattctcgagcagaattccgttgaagagcgtccactgcaggctaagatcattagactctatgctccttattggttttcaattgctaggtgtcctcctctcacattcaggcttgtagatatagaagggaagaaaaatacacgaaagataggtggtttatttcagtctaaaaagattaatgaagttgtcctagaggaaataactgaagaggaaatatatgaaggtcatacaattgcttcagctctgaattttaaaatgctgggccttgctgtgtcgattgatcaatctggcaacaagcagtttggacctgttaaagatctttctccgcttggtgacatggatggatcattggatgtccctgcttatgatggcgaaggcaattgcatgcagctttttattaccacgaaaccatgcctgtatcaatctgttcctacaaaggtaatatctgtccgaccatttatgaccttcaccaacagacttggtcgtgatgtatatatcaagttatgcagcgaggatgaaccaaaagtccttcatccatgtgattcaagaatatcatttgtatatcgtgtatcagatggacctaataaacttcagctggacaaccaactccctctaacattgatgccagtgttgttggctcctgagccggactctgatatccatcatcctgttgtcaagatgactataacaatgcgtaatgaaaatactgatggcatccaggtctacccttacatttatatccgggtgactgagaagtgttggaggcttaatattcacgaaccaataatttgggctttggtggatctatacaataatctacagttagatcgtctgcctaaaagttctagtgtcacagaagttgatccagaaatacgcatcgacctagtagacatttcagaagttaggctaaaggtgtcactggaaacagcaccagctcagagacctcatggggttctaggagtatggagcccaatactatctgcagttggaaatgcattcaagattcaggtgcatctgaggagggtgatgcacaaagacagattcatgcggagaagttccattgtctctgccattggtaaccgcgtttggagagacttgatccataatcctctacatttgatattttcagttgatgttcttggtatgacaagttcaactttggcttctcttagtaaagggtttgctgagctctcaactgatgggcagtttactcacctacggtcaaaacaggtattttcaaggagaattacgggggtgggtgatggaatcattcaaggcacagaagcatttgtgcaaggtgttgcttttggcgtatctggagtagtgaaaaagccagttgagagtgcaagacagaacggtctgtcaggactttttcacgggattggacgtgcattcctgggagttattgtgcaaccaatgagtggggcattggactttttctccttgactgttgatggaattggagcaagttgttcgaaatgcctagaggtcttcaatagcaagacaacattccagagaattagaaacccccgggcaatccgtgccaatggtatacttacagagtattctgagagagaggcagttggacagatgattttataccttgcagaagcacatcggcactttggttgtactgaaatattcaaggagccctcaaagtttgcttggtctgattattatgaagagcattttgttgtgccttaccagcggattgttttagtgaccaataagcgagtgatgttgcttcagtgtttggctccagacaaaatggacaagaaaccgtgcaagattatgtgggatgtgccttgggaagagcttatggcagtggagttggctaaagcaggtcacaatcagccatctcacttgatcctccacctcaaaagttttaggagatcagagaattttgtccgggtcataaagtgcaatgttgaagatgaagtagagggaagggaaccccaggctgttagaatctgttctgcagcatgtaggatgtggaaagcaaaccagtctgccatgaaaagcctgatgttgaaggttccatcaagtcagcgacatgtgtattttgcctggtctgaagccgaggggagagaaaaacgtactctgaacaaagcagtgactaggctgagagagctcccgtcatacagttctgcatcagatggtagaagatttgttaaacacagcatcaacttttcaaagatttggagcagtgaacaagaatccagaggtcgatgcacattgtgcaaaaagcaggttttggaagatgctggattatgtagcatttggagacccatttgtcctgacgggtatgtctctattggagatattgctcacattggcagccatcctccaaacgttgctgcagtttaccgtaaaattgacaggttgtttgcacttccagttggatacgacctggtgtggagaaattgtttggatgactatgcaacaccagtatcaatttggcatcctagagctccagaaggattcgtatctcctggatgcatagctgtggctggttttgttgagccagaacctgatttggttcactgtgttgctatatcacttgctgaggagacagaatttgaagagcaaaaggtttggtcagcttcagattcttatccatgggcatgtcacatttatcaagtccgcagtgaagctcttcacttcgtggcattaagaacaagcaaggaagaatctgactggaaacctatgaggattcttgatgatcctcagcccctattgcagtcattgaaagagcactag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

4920

Amino Acids

548.35

Weight (kDa)

5.93

Isoelectric Point (pI)

43.46

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 5 cut(s) 1902, 2276, 2415, 3719, 7752
AarI CACCTGC 3 cut(s) 5188, 5872, 7714
AasI GACNNNNNNGTC 3 cut(s) 13359, 14295, 14309
AatII GACGTC 3 cut(s) 340, 2966, 10258
Acc36I ACCTGC 9 cut(s) 3985, 5188, 5872, 6451, 6871, 7714, 8924, 13835, 14242
Acc65I GGTACC 2 cut(s) 540, 2612
AccB1I GGYRCC 3 cut(s) 540, 2612, 2875
AccB7I CCANNNNNTGG 3 cut(s) 3881, 11091, 13424
AccII CGCG 8 cut(s) 251, 464, 2522, 3676, 9597, 10090, 10393, 13086
AclI AACGTT 3 cut(s) 2816, 9627, 14355
AcoI YGGCCR 3 cut(s) 494, 724, 8288
AcvI CACGTG 1 cut(s) 221
AcyI GRCGYC 4 cut(s) 337, 2963, 8845, 10255
AdeI CACNNNGTG 3 cut(s) 9578, 14241, 14668
AflII CTTAAG 4 cut(s) 701, 4385, 4862, 5573
AflIII ACRYGT 5 cut(s) 462, 1477, 9595, 10873, 14056
AhlI ACTAGT 2 cut(s) 5159, 5843
AjiI CACGTC 2 cut(s) 446, 13391
AjuI GAANNNNNNNTTGG 2 cut(s) 11355, 11387
AleI CACNNNNGTG 1 cut(s) 2201
AloI GAACNNNNNNTCC 6 cut(s) 9968, 10000, 11982, 12014, 12513, 12545
Alw44I GTGCAC 1 cut(s) 1083
AlwNI CAGNNNCTG 7 cut(s) 594, 1831, 3179, 3341, 3380, 7250, 14534
Ama87I CYCGRG 7 cut(s) 1777, 6378, 6798, 11012, 11276, 12011, 13533
ApaI GGGCCC 1 cut(s) 77
ApaLI GTGCAC 1 cut(s) 1083
ArsI GACNNNNNNTTYG 8 cut(s) 460, 492, 1369, 1401, 2198, 2230, 14372, 14404
AseI ATTAAT 5 cut(s) 4277, 4754, 5465, 6009, 12180
Asp700I GAANNNNTTC 4 cut(s) 3446, 9352, 13975, 14658
Asp718I GGTACC 2 cut(s) 540, 2612
AspA2I CCTAGG 1 cut(s) 1499
AsuII TTCGAA 2 cut(s) 88, 13478
AvaI CYCGRG 7 cut(s) 1777, 6378, 6798, 11012, 11276, 12011, 13533
AvrII CCTAGG 1 cut(s) 1499
AxyI CCTNAGG 2 cut(s) 8012, 8507
BaeGI GKGCMC 5 cut(s) 50, 77, 241, 1087, 3660
BaeI ACNNNNGTAYC 4 cut(s) 7914, 7947, 14436, 14469
BalI TGGCCA 2 cut(s) 726, 8290
BamHI GGATCC 5 cut(s) 730, 908, 6337, 6757, 11141
BanI GGYRCC 3 cut(s) 540, 2612, 2875
BanII GRGCYC 7 cut(s) 77, 3110, 12974, 13194, 13656, 14136, 14476
BarI GAAGNNNNNNTAC 8 cut(s) 1505, 1537, 5302, 5334, 8467, 8499, 11602, 11634
BauI CACGAG 1 cut(s) 3222
BbrPI CACGTG 1 cut(s) 221
BbsI GAAGAC 8 cut(s) 1875, 3648, 4397, 4874, 4989, 5585, 5700, 13486
BbvCI CCTCAGC 2 cut(s) 14568, 14730
BcgI CGANNNNNNTGC 4 cut(s) 514, 548, 13458, 13492
BciVI GTATCC 5 cut(s) 1394, 2314, 8402, 9163, 14399
BclI TGATCA 6 cut(s) 915, 1968, 2266, 7393, 10729, 12283
BcuI ACTAGT 2 cut(s) 5159, 5843
BfoI RGCGCY 3 cut(s) 3067, 3547, 8402
BfrI CTTAAG 4 cut(s) 701, 4385, 4862, 5573
BfuAI ACCTGC 9 cut(s) 3985, 5188, 5872, 6451, 6871, 7714, 8924, 13835, 14242
BfuI GTATCC 5 cut(s) 1394, 2314, 8402, 9163, 14399
BglII AGATCT 7 cut(s) 1637, 2937, 2968, 8602, 9319, 10709, 12319
BlnI CCTAGG 1 cut(s) 1499
BlpI GCTNAGC 4 cut(s) 771, 2370, 2460, 13188
BmcAI AGTACT 4 cut(s) 8611, 11008, 11350, 11614
BmeT110I CYCGRG 7 cut(s) 1777, 6378, 6798, 11012, 11276, 12011, 13533
BmgBI CACGTC 2 cut(s) 446, 13391
BmrI ACTGGG 2 cut(s) 1086, 9147
BmuI ACTGGG 2 cut(s) 1086, 9147
BoxI GACNNNNGTC 4 cut(s) 1647, 2553, 10050, 10353
BpiI GAAGAC 8 cut(s) 1875, 3648, 4397, 4874, 4989, 5585, 5700, 13486
BplI GAGNNNNNCTC 6 cut(s) 5278, 5310, 5962, 5994, 12638, 12670
Bpu10I CCTNAGC 7 cut(s) 2223, 9087, 10024, 10327, 12645, 14568, 14730
Bpu1102I GCTNAGC 4 cut(s) 771, 2370, 2460, 13188
Bpu14I TTCGAA 2 cut(s) 88, 13478
Bsa29I ATCGAT 4 cut(s) 2439, 2917, 5050, 8837
BsaAI YACGTR 5 cut(s) 221, 556, 1601, 10874, 10925
BsaBI GATNNNNATC 9 cut(s) 1612, 2658, 3192, 8541, 10590, 11709, 12663, 14488, 14616
BsaHI GRCGYC 4 cut(s) 337, 2963, 8845, 10255
BsaI GGTCTC 5 cut(s) 2135, 8146, 10914, 12937, 14281
Bse118I RCCGGY 7 cut(s) 59, 121, 496, 3306, 8596, 8766, 9532
Bse21I CCTNAGG 2 cut(s) 8012, 8507
Bse3DI GCAATG 8 cut(s) 1178, 3137, 3903, 7683, 8517, 9229, 10855, 13933
Bse8I GATNNNNATC 9 cut(s) 1612, 2658, 3192, 8541, 10590, 11709, 12663, 14488, 14616
BseCI ATCGAT 4 cut(s) 2439, 2917, 5050, 8837
BseJI GATNNNNATC 9 cut(s) 1612, 2658, 3192, 8541, 10590, 11709, 12663, 14488, 14616
BseMI GCAATG 8 cut(s) 1178, 3137, 3903, 7683, 8517, 9229, 10855, 13933
BsePI GCGCGC 2 cut(s) 10088, 10391
BseRI GAGGAG 6 cut(s) 2963, 3960, 9170, 12090, 13036, 14585
BseSI GKGCMC 5 cut(s) 50, 77, 241, 1087, 3660
BseX3I CGGCCG 1 cut(s) 494
BsgI GTGCAG 6 cut(s) 857, 2357, 3726, 6479, 6899, 11095
Bsh1236I CGCG 8 cut(s) 251, 464, 2522, 3676, 9597, 10090, 10393, 13086
Bsh1285I CGRYCG 1 cut(s) 497
BshNI GGYRCC 3 cut(s) 540, 2612, 2875
BshVI ATCGAT 4 cut(s) 2439, 2917, 5050, 8837
BsiEI CGRYCG 1 cut(s) 497
BsiHKCI CYCGRG 7 cut(s) 1777, 6378, 6798, 11012, 11276, 12011, 13533
BsmBI CGTCTC 4 cut(s) 2954, 10040, 10343, 11571
BsmI GAATGC 8 cut(s) 652, 7867, 8558, 8704, 9117, 9719, 12998, 13394
Bso31I GGTCTC 5 cut(s) 2135, 8146, 10914, 12937, 14281
BsoBI CYCGRG 7 cut(s) 1777, 6378, 6798, 11012, 11276, 12011, 13533
Bsp119I TTCGAA 2 cut(s) 88, 13478
Bsp120I GGGCCC 1 cut(s) 73
Bsp1407I TGTACA 1 cut(s) 811
Bsp1720I GCTNAGC 4 cut(s) 771, 2370, 2460, 13188
Bsp19I CCATGG 4 cut(s) 710, 1154, 7563, 14621
BspDI ATCGAT 4 cut(s) 2439, 2917, 5050, 8837
BspFNI CGCG 8 cut(s) 251, 464, 2522, 3676, 9597, 10090, 10393, 13086
BspMI ACCTGC 9 cut(s) 3985, 5188, 5872, 6451, 6871, 7714, 8924, 13835, 14242
BspT104I TTCGAA 2 cut(s) 88, 13478
BspT107I GGYRCC 3 cut(s) 540, 2612, 2875
BspTI CTTAAG 4 cut(s) 701, 4385, 4862, 5573
BspTNI GGTCTC 5 cut(s) 2135, 8146, 10914, 12937, 14281
BsrDI GCAATG 8 cut(s) 1178, 3137, 3903, 7683, 8517, 9229, 10855, 13933
BsrFI RCCGGY 7 cut(s) 59, 121, 496, 3306, 8596, 8766, 9532
BsrGI TGTACA 1 cut(s) 811
BssAI RCCGGY 7 cut(s) 59, 121, 496, 3306, 8596, 8766, 9532
BssHII GCGCGC 2 cut(s) 10088, 10391
BssNAI GTATAC 2 cut(s) 11657, 13556
BssNI GRCGYC 4 cut(s) 337, 2963, 8845, 10255
BssSI CACGAG 1 cut(s) 3222
Bst1107I GTATAC 2 cut(s) 11657, 13556
Bst2BI CACGAG 1 cut(s) 3222
BstACI GRCGYC 4 cut(s) 337, 2963, 8845, 10255
BstAFI CTTAAG 4 cut(s) 701, 4385, 4862, 5573
BstAPI GCANNNNNTGC 6 cut(s) 647, 2052, 8231, 9578, 13544, 14241
BstAUI TGTACA 1 cut(s) 811
BstBAI YACGTR 5 cut(s) 221, 556, 1601, 10874, 10925
BstBI TTCGAA 2 cut(s) 88, 13478
BstDSI CCRYGG 6 cut(s) 710, 1154, 7563, 9989, 10292, 14621
BstEII GGTNACC 1 cut(s) 13079
BstFNI CGCG 8 cut(s) 251, 464, 2522, 3676, 9597, 10090, 10393, 13086
BstH2I RGCGCY 3 cut(s) 3067, 3547, 8402
BstMCI CGRYCG 1 cut(s) 497
BstNSI RCATGY 8 cut(s) 1163, 1481, 7808, 9075, 12391, 13989, 14060, 14631
BstPAI GACNNNNGTC 4 cut(s) 1647, 2553, 10050, 10353
BstPI GGTNACC 1 cut(s) 13079
BstSLI GKGCMC 5 cut(s) 50, 77, 241, 1087, 3660
BstSNI TACGTA 2 cut(s) 1601, 10925
BstUI CGCG 8 cut(s) 251, 464, 2522, 3676, 9597, 10090, 10393, 13086
BstV2I GAAGAC 8 cut(s) 1875, 3648, 4397, 4874, 4989, 5585, 5700, 13486
BstXI CCANNNNNNTGG 4 cut(s) 1197, 8981, 11181, 12792
BstZ17I GTATAC 2 cut(s) 11657, 13556
BstZI CGGCCG 1 cut(s) 494
Bsu15I ATCGAT 4 cut(s) 2439, 2917, 5050, 8837
Bsu36I CCTNAGG 2 cut(s) 8012, 8507
BsuI GTATCC 5 cut(s) 1394, 2314, 8402, 9163, 14399
BsuTUI ATCGAT 4 cut(s) 2439, 2917, 5050, 8837
BtgI CCRYGG 6 cut(s) 710, 1154, 7563, 9989, 10292, 14621
BtgZI GCGATG 2 cut(s) 3795, 7860
BtrI CACGTC 2 cut(s) 446, 13391
BveI ACCTGC 9 cut(s) 3985, 5188, 5872, 6451, 6871, 7714, 8924, 13835, 14242
CaiI CAGNNNCTG 7 cut(s) 594, 1831, 3179, 3341, 3380, 7250, 14534
Cfr10I RCCGGY 7 cut(s) 59, 121, 496, 3306, 8596, 8766, 9532
Cfr9I CCCGGG 3 cut(s) 6378, 6798, 13533
ClaI ATCGAT 4 cut(s) 2439, 2917, 5050, 8837
CseI GACGC 8 cut(s) 453, 3327, 3472, 8633, 8834, 10181, 10484, 12023
CsiI ACCWGGT 1 cut(s) 14412
DraI TTTAAA 8 cut(s) 1213, 3624, 7593, 8956, 9285, 10165, 10468, 12256
DraIII CACNNNGTG 3 cut(s) 9578, 14241, 14668
DrdI GACNNNNNNGTC 3 cut(s) 13359, 14295, 14309
DseDI GACNNNNNNGTC 3 cut(s) 13359, 14295, 14309
EaeI YGGCCR 3 cut(s) 494, 724, 8288
EagI CGGCCG 1 cut(s) 494
Ecl136II GAGCTC 3 cut(s) 13192, 14134, 14474
EclXI CGGCCG 1 cut(s) 494
Eco105I TACGTA 2 cut(s) 1601, 10925
Eco147I AGGCCT 2 cut(s) 9880, 11455
Eco24I GRGCYC 7 cut(s) 77, 3110, 12974, 13194, 13656, 14136, 14476
Eco31I GGTCTC 5 cut(s) 2135, 8146, 10914, 12937, 14281
Eco32I GATATC 7 cut(s) 2518, 6052, 6472, 7105, 9811, 11985, 12661
Eco52I CGGCCG 1 cut(s) 494
Eco53kI GAGCTC 3 cut(s) 13192, 14134, 14474
Eco72I CACGTG 1 cut(s) 221
Eco81I CCTNAGG 2 cut(s) 8012, 8507
Eco88I CYCGRG 7 cut(s) 1777, 6378, 6798, 11012, 11276, 12011, 13533
Eco91I GGTNACC 1 cut(s) 13079
EcoICRI GAGCTC 3 cut(s) 13192, 14134, 14474
EcoO109I RGGNCCY 5 cut(s) 577, 7449, 8586, 10528, 10790
EcoO65I GGTNACC 1 cut(s) 13079
EcoRI GAATTC 2 cut(s) 9457, 12019
EcoRV GATATC 7 cut(s) 2518, 6052, 6472, 7105, 9811, 11985, 12661
EcoT22I ATGCAT 7 cut(s) 3334, 6156, 6576, 7178, 9119, 13000, 14504
EcoT38I GRGCYC 7 cut(s) 77, 3110, 12974, 13194, 13656, 14136, 14476
Esp3I CGTCTC 4 cut(s) 2954, 10040, 10343, 11571
FauI CCCGC 6 cut(s) 397, 1003, 3306, 7437, 7609, 11736
FauNDI CATATG 6 cut(s) 322, 4419, 4896, 5607, 6021, 10597
FbaI TGATCA 6 cut(s) 915, 1968, 2266, 7393, 10729, 12283
FriOI GRGCYC 7 cut(s) 77, 3110, 12974, 13194, 13656, 14136, 14476
HaeII RGCGCY 3 cut(s) 3067, 3547, 8402
HgaI GACGC 8 cut(s) 453, 3327, 3472, 8633, 8834, 10181, 10484, 12023
Hin1I GRCGYC 4 cut(s) 337, 2963, 8845, 10255
HindIII AAGCTT 7 cut(s) 1997, 4101, 4578, 5258, 5942, 9185, 9660
HpaI GTTAAC 1 cut(s) 1165
Hpy99I CGWCG 5 cut(s) 339, 469, 472, 4038, 4515
Hsp92I GRCGYC 4 cut(s) 337, 2963, 8845, 10255
KflI GGGWCCC 1 cut(s) 10528
KpnI GGTACC 2 cut(s) 544, 2616
KroI GCCGGC 3 cut(s) 59, 496, 8596
KroNI GCCGGC 3 cut(s) 61, 498, 8598
Ksp22I TGATCA 6 cut(s) 915, 1968, 2266, 7393, 10729, 12283
KspAI GTTAAC 1 cut(s) 1165
MabI ACCWGGT 1 cut(s) 14412
MfeI CAATTG 8 cut(s) 2262, 2346, 6360, 6780, 7811, 12084, 12234, 12382
MlsI TGGCCA 2 cut(s) 726, 8290
MluI ACGCGT 2 cut(s) 462, 9595
MluNI TGGCCA 2 cut(s) 726, 8290
Mox20I TGGCCA 2 cut(s) 726, 8290
Mph1103I ATGCAT 7 cut(s) 3334, 6156, 6576, 7178, 9119, 13000, 14504
MroNI GCCGGC 3 cut(s) 59, 496, 8596
MroXI GAANNNNTTC 4 cut(s) 3446, 9352, 13975, 14658
MscI TGGCCA 2 cut(s) 726, 8290
Msp20I TGGCCA 2 cut(s) 726, 8290
MspA1I CMGCKG 9 cut(s) 1010, 1450, 2330, 3061, 10829, 11498, 11762, 12598, 13711
MspCI CTTAAG 4 cut(s) 701, 4385, 4862, 5573
MunI CAATTG 8 cut(s) 2262, 2346, 6360, 6780, 7811, 12084, 12234, 12382
Mva1269I GAATGC 8 cut(s) 652, 7867, 8558, 8704, 9117, 9719, 12998, 13394
MvnI CGCG 8 cut(s) 251, 464, 2522, 3676, 9597, 10090, 10393, 13086
NaeI GCCGGC 3 cut(s) 61, 498, 8598
NcoI CCATGG 4 cut(s) 710, 1154, 7563, 14621
NdeI CATATG 6 cut(s) 322, 4419, 4896, 5607, 6021, 10597
NgoMIV GCCGGC 3 cut(s) 59, 496, 8596
NmeAIII GCCGAG 3 cut(s) 8459, 10616, 14107
NsiI ATGCAT 7 cut(s) 3334, 6156, 6576, 7178, 9119, 13000, 14504
NspI RCATGY 8 cut(s) 1163, 1481, 7808, 9075, 12391, 13989, 14060, 14631
NspV TTCGAA 2 cut(s) 88, 13478
OliI CACNNNNGTG 1 cut(s) 2201
PaeI GCATGC 1 cut(s) 12391
PaeR7I CTCGAG 2 cut(s) 1777, 12011
PaqCI CACCTGC 3 cut(s) 5188, 5872, 7714
PasI CCCWGGG 2 cut(s) 6919, 9044
PauI GCGCGC 2 cut(s) 10088, 10391
PceI AGGCCT 2 cut(s) 9880, 11455
PciI ACATGT 2 cut(s) 1477, 14056
PcsI WCGNNNNNNNCGW 3 cut(s) 165, 476, 2914
PctI GAATGC 8 cut(s) 652, 7867, 8558, 8704, 9117, 9719, 12998, 13394
PdiI GCCGGC 3 cut(s) 61, 498, 8598
PdmI GAANNNNTTC 4 cut(s) 3446, 9352, 13975, 14658
PflFI GACNNNGTC 1 cut(s) 12483
PflMI CCANNNNNTGG 3 cut(s) 3881, 11091, 13424
PfoI TCCNGGA 9 cut(s) 4450, 4927, 5058, 5638, 8437, 8860, 11700, 11830, 14494
PmaCI CACGTG 1 cut(s) 221
PmlI CACGTG 1 cut(s) 221
Ppu21I YACGTR 5 cut(s) 221, 556, 1601, 10874, 10925
PpuMI RGGWCCY 4 cut(s) 7449, 8586, 10528, 10790
PscI ACATGT 2 cut(s) 1477, 14056
PshAI GACNNNNGTC 4 cut(s) 1647, 2553, 10050, 10353
PshBI ATTAAT 5 cut(s) 4277, 4754, 5465, 6009, 12180
PsiI TTATAA 5 cut(s) 1902, 2276, 2415, 3719, 7752
Psp124BI GAGCTC 3 cut(s) 13194, 14136, 14476
Psp1406I AACGTT 3 cut(s) 2816, 9627, 14355
Psp5II RGGWCCY 4 cut(s) 7449, 8586, 10528, 10790
PspCI CACGTG 1 cut(s) 221
PspEI GGTNACC 1 cut(s) 13079
PspOMI GGGCCC 1 cut(s) 73
PspPPI RGGWCCY 4 cut(s) 7449, 8586, 10528, 10790
PspXI VCTCGAGB 1 cut(s) 1777
PsrI GAACNNNNNNTAC 4 cut(s) 6021, 6053, 13138, 13170
PstNI CAGNNNCTG 7 cut(s) 594, 1831, 3179, 3341, 3380, 7250, 14534
PsyI GACNNNGTC 1 cut(s) 12483
PteI GCGCGC 2 cut(s) 10088, 10391
PvuII CAGCTG 4 cut(s) 2330, 10829, 11762, 12598
SacI GAGCTC 3 cut(s) 13194, 14136, 14476
SalI GTCGAC 4 cut(s) 466, 3815, 4035, 4512
ScaI AGTACT 4 cut(s) 8611, 11008, 11350, 11614
SexAI ACCWGGT 1 cut(s) 14412
Sfr274I CTCGAG 2 cut(s) 1777, 12011
SfuI TTCGAA 2 cut(s) 88, 13478
SgrDI CGTCGACG 1 cut(s) 466
SlaI CTCGAG 2 cut(s) 1777, 12011
SmaI CCCGGG 3 cut(s) 6380, 6800, 13535
SnaBI TACGTA 2 cut(s) 1601, 10925
SpeI ACTAGT 2 cut(s) 5159, 5843
SphI GCATGC 1 cut(s) 12391
SseBI AGGCCT 2 cut(s) 9880, 11455
SstI GAGCTC 3 cut(s) 13194, 14136, 14476
StuI AGGCCT 2 cut(s) 9880, 11455
TaqII GACCGA 1 cut(s) 171
TauI GCSGC 4 cut(s) 441, 2525, 3064, 3676
TspMI CCCGGG 3 cut(s) 6378, 6798, 13533
Tth111I GACNNNGTC 1 cut(s) 12483
Van91I CCANNNNNTGG 3 cut(s) 3881, 11091, 13424
Vha464I CTTAAG 4 cut(s) 701, 4385, 4862, 5573
VneI GTGCAC 1 cut(s) 1083
VspI ATTAAT 5 cut(s) 4277, 4754, 5465, 6009, 12180
XceI RCATGY 8 cut(s) 1163, 1481, 7808, 9075, 12391, 13989, 14060, 14631
XcmI CCANNNNNNNNNTGG 6 cut(s) 2503, 9907, 10833, 11184, 11901, 14457
XhoI CTCGAG 2 cut(s) 1777, 12011
XmaI CCCGGG 3 cut(s) 6378, 6798, 13533
XmaJI CCTAGG 1 cut(s) 1499
XmnI GAANNNNTTC 4 cut(s) 3446, 9352, 13975, 14658
ZraI GACGTC 3 cut(s) 338, 2964, 10256
ZrmI AGTACT 4 cut(s) 8611, 11008, 11350, 11614
Zsp2I ATGCAT 7 cut(s) 3334, 6156, 6576, 7178, 9119, 13000, 14504
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.