MD06G1043800.v1.1

Vacuolar protein sorting-associated protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr06
OG0004352
Physical Location & Seq
Forward (+)
5851387 .. 5902619
51233 bp
Loading structure...
UTR
Exon/CDS
Intron
MD06G1043800.v1.1.491

Sequence Viewer

Length: 13002 bp
ATGTTGGAGGATCAGGTGGCGAACCTCCTGCAGAGGTACTTGGGGGACTACGTGAGGGGGCTCAACAAGGAGGCCCTCAAGATCAGTGTCTGGCGAGGTGATGTGGAGCTAAAAAATATGCAGCTGAAGCCTGAGGCACTCAATGCACTAGAATTACCAGTGAAGGTTAAGGCAGGATTTCTTGGATCAGTGAAACTTAAGGTTCCATGGAGCAGGCTTGGCCAGGATCCAGTTTTAGTTTCTTTGGACCGCATTTTTCTGTTAGCTGAACCTGAAACTCAAGTTGAAGGATCCAGTGAGGATGCTGTACAGGAAGCTAAGAAAAACCGAATTCGGGAAATGGAAATGAAGCTTTTAGAGAGGACGCAGCAACTAAAGTCAGACATGAATACATCATGGTTAGGATCCCTGATCAGCACAATAATTGGAAATTTGAAACTTTCAATTTCAAATATTCACATCAGATACGAGGATATTGAAAGCAACCCGGGCCATCCGTTTGCAGCAGGCATAACCTTGGAAAGCCTTTCCGCTATGACAGTTGATAGCAACGGAAATGAAACATTTGTCACTGGGGGTGCTCTAGACTGTATACAGAAGTCTGTTCAACTCGATCGGCTTGCACTTTATTTGGATTCTGATATTGCTCCATGGCATGTTAACAAACCATGGGAGGATTTGCTTCCATCAGAGTGGGTCCAGGTTTTTAGATTTGGTACTCAATATGGTAAACCAGCGGATAGATTACCCAAAAGGCACACTTACATACTGGAACCTGTGTCTGGCAATGCTAAGTACTCAAAACTACTGCCAAATGAATTAGCTGATAGCGGCCAGCCTTTGCACAAAGCAGCAGTTAATTTGGATGATGTGACTCTCTGTTTGCCAAAGGATGGATACATGGATGTGCTAAAGTTAGCAGATAATATTGCTGCATTTAATCAGCGATTGAAGTATGCTCATTATCGTCCACATGTCTCTGTAAAATCTAACCCTAGATCTTGGTGGAAGTATGCTTATAGAGTTGTTGCTGACCAAATGAAGAAGGCAAGTGGGAGATTGTCATGGGACCATGTTCTGAAGTATGCAAGCTTGCGTAAAAGATATATCTCTCTATATGCTTCACTTCTTAGATCTGATCCTCGTCGGTTAGTGGTTGATGACAACCAAGATATTGAGGAGCTAGATCGTGGGCTTGATGTTGAACTGATACTCCAGTGGAGGATGTTGGCTCACAAGTTTGTAGAGCAGTCATTAGAGTCGGACCTTGCGTCGAGGAAACAGAAAGCAAAGAAACCTTGGTGGGGATGGGGGAGTCGGTCCAAGAAAGGTGAAAGTGAGCCATTTAGTTTCAGTGAGGAAGACTGGAAGCAGTTAAGTAGCATCATTGGCTATAAGGAAAGTGATGATAATGTCTCAGTTATAAGTAATGACAAGGTGGATGCTCTTCAGACATCCTTGAGCATTTGCATGAAACATAATGCTACTAAGCTTGTTGATGAGTCCCTGGAGTGTCTTGCTGAGTTATCATGTGAAGGCTTGGATTGCTTTATAAAGCTTTATCCAGAGGCAAAGATTTTTGACATGAAATTAGGATCATACAAGTTATCCACGCCGAGTGGTCTCCTTGCAGAGAGTGCAAGTGCCTATGATTCTTTAGTTGGCACGTTCTGTTATAGGCCTTTCAACAAAAATGTGGACTGGAGCTTGGTTGCTAAAGCTTCTCCTTGTTACGTGACATATTTAAAGGACGCAATCGATCAAATTATCAAATTCTTTCGTAGCAGTACAGCTGTCAGTCAGACAATAGCATTGGAAACTGCAGCTGCAGTGCAGATGACAATCAATGGAGTCAAGCGCACAGCTCAGCAACAAGTGAATAGAGCATTGAAGGACCATTCCAGGTTTTTGTTGGACTTGGATATTGCAGCCCCCAAGATTGCAATTCCTACTGATTTTTGTCCCGACAACACGCATCCAACAAAGCTCATGCTTGACTTGGGAAATTTGGTCATTGTTACCAAGGATAGTTATGAAGATGGATCACAGGAGGTGCTAGATTTGTATCTGCAGTTTAATTTAGTTTTAAGCGACGTATCTGCTTTTCTGGTTGATGGTGACTACTGTTGGAGTCAATCTCCTTCAAAGATGTCTTCTGGTTCTGCCAACTCAAATGATGTTAGTTTGTTGCCTTTTATTGATAAATGTGGGGTCAACGTAAAGCTTCAACAGATTAGATTAGAGAACCCATCCTACCCGTCAACAAGAGTTGCTGTACGGCTGCCATCATTACGGTTTCACTTCTCTCCAGCTCGGTATCATCGATTGATGCAAATCGTTAAGATGTTTGAGCAGGAGGATAGTGAGGACTCAGCTCTTCTTCGCCCTTGGAATGAGGCTGACTTCGAGGGGTGGTTGTCTCTTCTTGTGCGGAAGGGTCTTGGAAATAGGGAAGCAGTGTGGCAGCGGCGCTACCTATGCTTAGTTGGGCCTTTTCTTTATGTACTTGAGGACCCTAGCTCTAAATCGTACAAACTGTGTATCAGCTTAAGGGGAAAACACATATATCAGGTCCCCCCAGAGTCTGTTGGTGGTGCTGATCTTGTATTGGCTGTCTGTGATGCCGCACGAGCAAATATCAAAGTGGTGGAGGATGCAAATGCACTAATATTGCAATGTGACTCCGAAGATTCAAAGAAAGCTTGGCATAGCCGGTTGCAGGGGGCTGTCTATCGTTCATCGGGTTCTGCTCCTGTGACTAGTCTAACTGAAACTTCATCGGAGTCTGAGGATTCAGTAACGGAGCTTAATTCCAATGAGGATATGGTTGATATATCAAAAATGGAGAGAGTCTTTATTACTGGTGTTCTTGATGAACTGAAGGTCTGCTTCAGTTACAGTAGTCAGCATGACCAGAATTTTATGAAAGTGCTCCTAACTGAAGAAAGGCGTTTATTTGAATTTCGAGCAATAGGTGGCCAGGTTGAGCTATCGGTTAGAGCAAGTGACATGTTCGTTGGAACTGTTTTGAAATCTTTGGAGATTGAAGATTTAGTTTCTGGTCACAGGATGTCTCAGCCTCGCTATCTGGCAAGATCATTTACCCGCAATGCAGAAACAAATTTAACCTCTGGTGCCACTGGTAATCAAAGTTTTGATGGCAGTGATGTAATCCCGAATGGAGATGAATTCTACGAGGCACCAGAAAATTTGGTTGATCCTGAAACTTTATTGTTGAAATCCCCTCGTTTTACCCGTATTGCTGGTTTGCTCCCTGGTCTTCAATCAACAAAGGACGTTGAACTCAAAGATCTGTTGGATAGTTTTGTGAAAGCTCAAGTAGTTATCTATGACCAGAACTCTCCTCTGTACCATAACATAGACATGCAGGTCTCGGTCACCCTGGCTACCCTATCATTTTTCTGTCGTCGACCAACAATTCTTGCCATCTTGGAATTCGTTACTGCTATTAACATCAAGGATGAAAGATGTGAATCTTTCAGTGACAGTTCTTCAGCACCTATTGTGAAACAGGACATCTCCAGAGATGATGCAGTTGATGGTCCACGATCAGTTACCATCAATGAGCCATCTATTAAAGGATTGCTGGGAAAGGGGAAGTCCAGGGTCGTTTTTAATTTAACATTAAACATGGCCCGCGCTCAAATTATATTAATGAATGAAGATGAAAGCAAGCTTGCTGTTTTGTCTCAAGATAATTTGGTTACCGATATTAAGGTCTTTCCATCCTCTTTTAGTATTAAGGCAGCCCTTGGAAATCTTAGAATAAGTGATGAGAGTCTTCCTAGCAGCCATATGTATTTCTGGGCATGTGACATGAGAAATCCAGGAGGCAGTTCATTTGTTGAGTTAGTTTTTACTTCATTCAGTGTTGATGATGAAGACTACGAAGGTTATGAGTATAGCCTTTATGGGCAGCTTTCAGAAGTACGCATTGTTTATTTAAATCGGTTTATCCAGGAGGTGGCTAGTTACTTCATAGGTCTGGTTCCCAAGAATCCCAACAATCCAAAAGGTGTTGTCAAGCTAAAAGATCAAGTCACAAATTCAGAGAAATTGTTTACAACTAGTGATTTTGAGGGATCGCCTGCATTGAAGTTGGATGTATCGCTTAGGAAGCCTATTATTTTGATGCCTCGGAAAACAGACAGTCCTGACTACTTGAAGCTTGACATTGTTCATATTACTGTCCGGAACACCTTTAAATGGTTTGGTGGAAGTAGAAGTGAAATTAATGCTGTTCATATGGAAGTGTTAACAGTTCAGGTTGAGGACATCAATCTAAATGTTGGCACAGAAGCGGATTTAGGTGAAAGTATAATTCAAGATGTGAAGGGAGTTTCCGTTGTGATTCAAAGGTCACTTCGAGATTTGTTGCATCAAGTACCAAGTATTGAGGCTGTAATCAAGATGGAGAAATTGAAAGCAGCTTTGTCAAACAGGGAATATCAGATTATCACTGATTGTGCGCAGTCTAATATTTCTGAAACTCCACATGTTATACCTCCACTGAACCATGAGTCTATGATACCATCAGTTGATGTTGAAGAAGACATCACTCCTCAAGACCCTGTTGGACTCGAATCTCAAAATGCAAATGAGGGAGCTTGGGTTATGATGAAAGTCTCTCTTGTTATTGGTTTGGTTGAATTATGCTTGCATACTGGAGTAGCAAGAGATGCACCTCTAGCCACTGTACAGATCAGTGGTGCATGGTTACTGTACAAGTCAAATAGATTAGGAGAAGGCTTCGTATCAGCAACACTAAAGGGGTTTGCTGTGCTTGATGATCGTGAGGGTACTGAACCAGAGTTTAGGTTGGCAGTAGGAAAGCCCGAGTATGTTGGTTCAAGTCCCCTAGATTTTGTGACTCATGATGGTGCTCGACAAATCTCCGGTGCACATGATACAGAAGTGAATGATTTCAAATTAGTTCCTACGATGCTCATTCTTGATGCAAAATTTTGTCAGCTGTCAACAGTTGTTTCTTTATGCATCCAAAGGCCACAACTGCTGGTTGCACTTGATTTTCTGCTGGGTGTTGTTGAGTTTTTTGTTCCTACAATCAGCAATACTCTTTCAAGTGAAGAAGTACAGAACTCCATCCATGGAATGGATGCAGTGATCTTGGATCAGTCAACTTACAAGCAACCCTCTACTGAATTTTCTCTTTCTCCTCTAAGGCCTTTAATAGCTGATGATGGAAGGCATGGTCATTTTGTTTATGATGGCAATGGTGGTACACTATATTTGAAAGATAAGCAGGGAGCTATTCTCTCCGGCCCTAGTACAGAGCCAATAATATATGTAGGAGACGGGAAGAGGTTGCAATTCACAAATGTTGTCATCAAGAATGGACTGTACCTAGATTCATGCATTTCTATGGGATCCAACAGTAGCTATTCAGCATTGAAGGAAGATCAGGTCTCCTTTGTGGGAGGGAATGAAGATTCAAATATGAATTCCTCAACAGAAAGTGTCAATGATGTGCCACCTCAAAGTATTGTGGCCGACAAGTCCACAGAGATTGTTATTGAGTTGCAGTTGGTTGGTCCAGAGCTGACATTCTATAATACTTCTCAAGATGTTGGGGAATCACTTGTGCTCTCCAACCAACTTTTGCATGCACAGTTGGATGGATTCTGCAGGCTTGTTATGAAGGGTGATACCATGGAGATGAATGCAAATGTGCTTGGTTTAACTATGGAGAGTAATGGAATCACGATTCTGGAGCCTTTTGACGCCTCTGTGAAATATTCAAATGCTTCTGGAAAGACCAATATACATCTAAGTGTTTCAGATATATTTATGAATTTTTCATTCAGCATCCTCAGACTGTTTTTAGCAGTTGAAGAGGATATCTTGGCATTTTTAAGAACAACATCAAAGAAAATGACAGTGGTTTGCTCGCAGTTTGACAAAATTGGAACAATACGAGATCCCTTCGGTGATCAAATATATACTTTCTGGAGGCCTCAAGCACCTACTGGTTTTGCAGTTCTTGGGGATTACCTGACACCATTGGACAAGCCGCCTACAAAAGCAGTTCTTGCTGTAAATACCAATTTTGCTAGAGTCAAGAAGCCCCTGTCTTTTAAGCTGATTTGGCCACCTTTACCTTCTGAGGGCTCGTCTGTTGATAGTGTAAATGATTCTGATTCACTACCAAATGATGTCCTTTCTGACGGAGCTAGTTGTTCCATTTGGTTCCCTGAAGCACCTAAGGGATATGTTACATTGGGCTGTGTAGTTTCCCCTGGAAGAACACAGCCACCACTGTCTTCTGCTTTCTGTATCTTGGCTTCTTTAGTTTCTTCTTCTTCCTTAAGGGATTGCATTGCAATCAGTACCAACAATCCATATCAGTCAACTTTAGCATTCTGGCGTGTGGATAATTCTGTTGGCACCTTTTTGCCAGCAGGTCCAAATATGTCTAGTGTAATGGGTACAGCCTATGATTTGCGTCACATGATATTTGGATTTTCAGAAGCATCTGAAAAATCATCTAATCGTTTCACTGTCCAAGATACTTCTTCTCAACGTCATGATGTCCAATCAGAAAGGTTGGCAACCGTAAACTCTGGGCCGCATTATGAAGCTGTAGCTAGTTTCCAATTGATATGGTGGAATCAGGGCTCAAACTCAAGGAAGAAACTGTCTATATGGCGTCCAGTTGTCCCTCATGGGATGGTATATTTTGGTGATATTGCAATCAACGGGTACGAGCCCCCAAATACCTGCATTGTTCTTCATGAAACAGGAGATGACGGGATCTTCAAAGCCCCTCTTGATTTCCAGCTTGTTGGGCAAGTTAAGAAACAGTGGGGAATGGAGAGTATATCTTTCTGGCTTCCTCAGGCTCCTCCAGGGTTTGTTTCCCTTGGTTGTATTGCATGCAAGGGAACACCAAAACAATCTGATTTCAGCTCATTAAGATGCATGCGCAGTGATATAGTAGCTGGAGATCAATTTTCAGAGGAAAGTGTATGGGATACATCTGATGCGAAGCATACAAGAGTTTCTTTTAGTATCTGGTCAGCTGGCAATGAGTTGGGGACCTTTATAGTTCGTGGTGGGTTCAAAAAACCTCCAAGAAGGTTTGCTTTAAAGCTGGCCGAGTCAAATGTGCCAAGTGGTTCAGATGATACTGTAATTGATGCAGAATTCAGAACTTTTTCTGCTGCACTTTTTGATGACTATGGTGGCTTGATGGTTCCATTGTTTAATGTCTCTTTAAGTGGAATTGGGTTCAGTTTACATGGAAGAACCGACTACTTGAATTCTACTGTGAGCTTCTCTTTGGCCGCTAGATCATATAACGATAAGTATGAAGTTTGGGAACCCCTTGTTGAGCCAGTAGATGGGTTCTTAAGGTACCAATATGATCTTACTGCTACATCTACAGCTTCCCAGTTACGCCTTACCTGTACCAGGGATCTGAACTTGAATGTTTCTGTATCTAACGCTAATATGATTATTCAAGCTTATGCAAGCTGGAACAGTCTTATTCATGTGCACGAATATGATGGAAAAAGAGAAGTATCCTCTCCAACAGATGGTGGAAGATCTGCTATTGACGCACATCACAAGAGAAACTACAATATAATGCCACAAAACAAACTTGGTCAGGATATCTTTGTTCGAGCTACAGAATTAAGGGGACTCGCAACCATAATTAAGATGCCGTCTGGGGATATGAGGCCCGTGAAAGTTCCTGTTTCCAAGAATATGCTGGACTCTCACTTGCAAGGAAAACTTTTCCGTAAAGTTAGAACAATCGTTACCCTTATCATAGTGGACGGGCAGTTTCCACAGGTTGGAGGGTTAACATCCCCCCAGTATACCGTAGCAATTCGCCTTAGTCCTGACCCGAATCTCCCTAGTGGATCACTGAGCCATCAACAAAGTGCACGTACTTGCGGAAGCAGCTCAGATCACTTGTCTTCAGAGCTTGAGTTGGTCAAGTGGAATGAAATTTTTTTCTTTAAAGTCGACAATCCAGACTACTACTCAGTGCAATTAATTGTGACGGAACTGGGAAAAGGGGTCCCTCTTGGATTATTTTCAACCCCTTTAAAGAGGATTGCGGGGATCGTCCATGATAATTCTTACCCACATGATAGCGTGAACAAATGGACCTGGGTTGAATTATCCAAAACAGAATCTACGGGATATAATGGTGAAAAGTCGTGTGGCAAAATCAGATGTTCAGTGCTGTTGTCACCGACATCTGAAGCTGAGATAAGTGGTCAAACCGATGACAGTGGCAGAAAATCTGGTTTTATTCAGATCAGTCCAAGCAGGGAAGGGCCTTGGACTACAGTGAGGTTAAATTATGCTGCACCAGCTGCTTGTTGGAGGTTAGGGAATGACGTTGTTGCTAGTGAAGTACATGTGAATGATGGCAATCGATATGTGGATATTAGGTCTCTTGTTTCCGTACGTAACAGTACGGATTTTGAACTTGATTTGTGCCTTGTACCTAAAGTTTCCATGGAAGATACCACTCTAAAAAACAAGGCTAGTACCCTTGAAGGTCAAATACAATTTAAGAAACTTCAGACTGATGAGTTCTTTGAAACTGAAAAATACAGCCCTGGTACTGGTTGGATTGGCAACATTGCTCAACCAAGCCAAGATATCATTGAAAGTGGAGGATCTCATCAGGGAGTTCCGGCAGTTGAGTTACCACTGGGCTGGGAATGGGTTGATGATTGGCATTTGGATATGGAATCTGTTCACACTGCTGATGGTTGGGTTTATGCTCCAGATGTTGAGAGTTTAAAATGGCCCGAGTCATTTGATCCATTAAGATCTGCAAACTCTGCAAGGCAAAGGAGATGGATCAGGAATAGAAAACAAAATGATACACATCAGGAAATATCTATTGGACTTTTGAAACCTGGAGATACGGTATCTCTTCCTCTATATGGGTTAACACAACCTGAAATGTACGTATTGTGTTTGAGGCCCTCTCTCTGCAATAGTAGTGAGTATTCTTGGAGTTCAGTGGTGGATGGGTCTGAACAAACAGAGGATTCTGGTAAGTCAAAATTATGCTCTGGGATAAGTGTGTCTTCTCTCACTGAGTCCGAGGAACTGTTATATTGCACTCAGATAAGTGGTAGTTCTTCAAGTTCTCATAAGTTGTGGTTTTGTATGAGTGTACAAGCGACAGAGATTGCCAAAGATATTCATTCTGATCCTATCCAGGATTGGACTCTTGTAATCAAGTCCCCGCTATTTATCTCCAATTTTCTTCCACTTGCAGCTGAATATTCTGTTTTTGAGATGCAAGATAGTGGCAACTTTTTTGTTTGCTCGAGAGGAGTATTATTTTCAGGAAAAAGTGTCAATGTTTATAGTGCTGACATAAGAAGCCCTTTGTTCCTTTCACTGCTTCCGCAAAGAGGGTGGCTGCCTATACATGAAGCTGTTCTTTTTTCCCATCCTCATGAAGTTCCACCGAAAACTATAAGTTTGAGAAGTTCGATATCTGGAAGGATTGTTCAAATTGTTCTTGAACAGAATTCTGACAAAGAACGGCCACTGCAAGCTAAGATCATTAGGCTGTATGCTCCTTATTGGTATTCAATTTCTCGGTGTCCCCCTCTCAAACTTAGGCTTCTAGATATCAAAGGAAAGAAACATATGCAAAAGGTTGGTAATCCATTTCGTTCTACAAAGGACAATGAAACTATCCTGGAGGAAATAACTGAAGAGGAAATATATGAAGGTCATACAATTGCTTCGTCTTTGAAATTTAAATTGTTGGGCCTTGCGTTGTCCATTGATCAATCTGGACAAGAGCAATTTGGACCTGTCAAAGATCTTTCTCCCCTTGATGACACGGATGGGTCTTTGGATCTCTATGCTCATGATGGTGAAGGCAGTTGTATGCGGATTTTTATTACAACAAAACCATGCCTATATCAGTCTGTTCCCACAAAGGTAATTTCTGTCCGACCATATATGACTTTTACCAATAGACTTGGTCGGGACATATCCATTAAGTTATGCAGTGAGGATGAACCAAAGATCCTTCGAGCATCTGATGCAACGGTCTCATTTGTACATTGTGAGTCAGAAGGACATGATAAACTTCAGGTTCGACTAGAAAATACCGACTGGTCATTTCCTGTTCAAATTGTAAAGGAGGACACCATTTCTCTTGTTTTGAGGAAGCATGATGGTACTCGGACATTTTTAAGAACAGAGATTCGGGGCTATGAAGAAGGTTCACGATTCACCATTGTATTCTGCCTTGGATCAACCAGTGGTCCCATCAGAATTGAGAACAGAACAGTCAGTAAAACAATTAGAATTCGCCAGTCTGCTTTCGGTGAGGATGCCTGGATTCGCCTAGGGCCTCTTTCAACTACAAATTTTTCTTGGGAAGACCCTTATGGCCAAAAAATCATGGAAGCAAAGGTTGACAGTGCTACAATTGGGCCTTGGGAACTTGATTTGGAAAGGACCGGGATATGTTATGAAGATGAGGGACTTGAATTACAATTTTATGTTATGGAAGTTGGTGATATCAAGGTAGCTAGGTTCACAGACACCACAACTTCTGGGACAAGTTTGGATTTGCAAATTGCTGGAAATTGGAGGCATTCTCAAATGCAAAACACCATTCAAAATAATAGTGCCTCGCCTGTTGAGCTTATAATTGAGTTTGGAATTGTAGGGATCTCTATTGTTGACCATAGACCAAAAGAGGTCTCCTACTTTTATTTTGAGAGAGTCTTCGTATCATATTTGACCGGTTATGATGGTGGTACAACAACCAGGTTCAAGCTCATACTGGGTCATCTGCAGTTGGACAACCAGCTCCCTCTAACAGTGATGCCAGTTCTGTTGGCTCCAGAAATGAACTCTGACATGCATTATCCAGTGTTCAAAACGACTATTACAATGCGCAATGATAATAGTGACGGCGTCCAGGTGTACCCTTATGTTTGTATACGGGTAACCGATAAGAGTTGGAGGCTTAATATTCATGAACCGATAGTTTGGGCTTTGGTGGATTTCTACAATAATCTACAGTTAGATCGTTTGCCTAAAAGTCCTCGTGTCACAGTAGTTGATCCGGAAATACGCATTGACCAAATAGATGTTTCAGAAGTTAGGCTGAAGGTGTCATTGGAAACAGCACCAGCCCAAAGACCTCATGGGGTTCTCGGAGTGTGGAGCCCCATACTATCAGCTGTCGGAAGTGCATTCAAGATTCAGGTGCATTTGAGAAGGGTGATGCACAAAGACAGATTCATGCGGAAAAGTTCCATTGTTTCTGCCATTGGTCACCGTATTTGGAGAGATCTGATCCATAATCCTTTACATTTGATATTTTCAGTCGATGTACTTGGTATGACAAGTTCAACATTGGCTTCTCTTAGTAAAGGGTTTGCTGAGCTGTCAACTGATGGACAATTTCAGCAACTGCGTTCAAAGCAGGTGACGTCAAGGAGAGTAACTGGGGTGGGTGATGGAATTATGCAAGGTACAGAAGCACTTGTGCAAGGTGTTGCCTTTGGGGTATCTGGAGTGGTGAATAAGCCTGTAGAGAGCGCAAGACAAGATGGTGTTTTAGGACTAATTCATGGGCTTGGGCGTGCTTGTCTAGGAGTGATAGTGCAACCAGTCAGTGGGGCATTGGACTTCTTGTCATTGACTGTTGATGGAATTGGAGCAAGTTGTTCCAAATGTTTAGAGGTTTTCAATAGCAAGACAACCTTCCAGAGAATTAGAAATCCCCGAGCAATCCATGCTGATGCTGTGCTTAGAGAATATTGTGAGAGAGAAGCTGTTGGGCAGATGATTTTATACCTTGCAGAAGCACATCGGCACTTTGGTTGTACTGAAATATTCAAGGAGCCATCAAAGTTTGCTTTGTCTGACTATTATGAAGATCATTATGTTGTGCCTTACCGACGGATTGTTTTAGTGACGAATAAGCGAGTCATGCTGCTTCAGTGTTTGGCTCCAGATAAAATGGATAAGAAACCTTGCAAGATCATGTGGGATGTACCTTGGGAAGAGCTCATGGCTGTGGAGTTGGCAAAAGCAGGCTGCAATCAACCATCTCACTTGATCCTCCACCTTAAAAATTTTAGGAGATCAGAAAATTTTGTTCGGGTGATAAAGTGCATTGTTGAAGAAGTTCCGGGAAATGAACCCCAAGCTGTTAGGATCTGTTCCATAGTACGTAAGATGTGGAAAGCATATCAGTCGGACATGAAAAGCCTAATGCTGAAGGTTCCATCAAGGCAGCGACATGTGTATTTTTCCTGGTCTGAAGCTGATGGGAGAGAGCACTGTATACAGAACAAGGCAATTACTAGGCTGAGAGAGCTTCCATCATACAATTCTGCATTGAATGATAGATTTGTTAAACACAATATCAACTTTTCTAAGATTTGGAGCAGCGAACAAGAATCCAGAAGTCGATGCACGTTGTGCAGAAAACAGGTTCCCGAAGATGATGTAATATGTAGCATTTGGAGACCCATCTGTCCTGACGGCTATGTCTCAATTGGTGATATTGCTCACATTGGCAGCCATCCTCCAAACGTTGCTGCTGTTTATTGCAAGATTGACAGATTGTTTGCACTTCCAGTTGGTTATGACTTGGTATGGAGGAACTGCCGGGAGGACTATGCAGCACAGGTATCAATTTGGCATCCTCGGGCTCCAGAAGGATATGTGTCTCCCGGATGCATTGCTGTGCCTAGTTTTATTGAGCCAGAACTTGATATAGCATATTGTGTGGCTGAATCACTTGCTGAAGAGGCAGAATTCGAAGGGCAAAAGGTTTGGTCTGCTCCAGATTCTTACCCCTGGGCGTGTCACATTTATCAAGTCCAAAGCGACGCACTTCACCTTGTGGCTCTAAGGCAAACCAAGGAAGAATCTGGCTGGAAACCTATGAGGGTTATTAACGATCCTCGGCCTCTATTGGAATCACTAAAAGAGAACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Chorein_N PH Pex24p SHR-BD VPS13 VPS13_C VPS13_mid_rpt Vps62

Protein Analysis

4334

Amino Acids

483.71

Weight (kDa)

5.66

Isoelectric Point (pI)

43.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
VPS13_N PF12624 1 - 474 3.9e-99 VPS13-like family N-terminal region
VPS13_N PF12624 556 - 677 1e-11 VPS13-like family N-terminal region
PH PF00169 802 - 910 2.6e-09 PH domain
VPS13_M PF25033 1368 - 1973 4.2e-09 VPS13-like family middle region
Vps62 PF06101 1977 - 2136 8.1e-10 Vacuolar protein sorting-associated protein 62
Vps62 PF06101 2207 - 2354 3.3e-09 Vacuolar protein sorting-associated protein 62
VPS13_VAB PF25036 2948 - 3477 1.1e-21 Vacuolar-sorting associated protein 13, adaptor binding domain
VPS13_C PF25037 3923 - 4031 1.1e-13 Intermembrane lipid transfer protein VPS13, C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 1424, 1553, 10691
AarI CACCTGC 1 cut(s) 11467
AasI GACNNNNNNGTC 3 cut(s) 3389, 12534, 12548
AatII GACGTC 1 cut(s) 11486
Acc16I TGCGCA 3 cut(s) 4491, 6965, 10943
Acc36I ACCTGC 4 cut(s) 3379, 6431, 6767, 11467
Acc65I GGTACC 1 cut(s) 7395
AccB1I GGYRCC 4 cut(s) 3134, 3199, 6425, 7395
AccB7I CCANNNNNTGG 7 cut(s) 893, 3985, 5134, 7382, 7577, 7838, 11669
AccI GTMKAC 6 cut(s) 592, 3430, 7862, 8013, 10987, 12343
AccII CGCG 1 cut(s) 3660
AccIII TCCGGA 2 cut(s) 4212, 11113
AclI AACGTT 1 cut(s) 12594
AcoI YGGCCR 9 cut(s) 220, 832, 2977, 5529, 6128, 7134, 7323, 9566, 10429
AcyI GRCGYC 4 cut(s) 5763, 6688, 10962, 11483
AdeI CACNNNGTG 2 cut(s) 12480, 12907
AflII CTTAAG 4 cut(s) 197, 2548, 6346, 7390
AflIII ACRYGT 5 cut(s) 973, 3009, 4516, 8413, 12298
AgeI ACCGGT 1 cut(s) 10787
AhdI GACNNNNNGTC 2 cut(s) 1270, 11686
AhlI ACTAGT 2 cut(s) 2759, 4088
AjuI GAANNNNNNNTTGG 4 cut(s) 8892, 8924, 11150, 11182
AloI GAACNNNNNNTCC 6 cut(s) 1197, 1229, 9513, 9545, 10044, 10076
Alw21I GWGCWC 9 cut(s) 583, 2934, 4906, 4924, 5628, 7539, 7933, 12066, 12339
Alw44I GTGCAC 3 cut(s) 4920, 7535, 7929
AlwNI CAGNNNCTG 3 cut(s) 90, 2585, 11464
Ama87I CYCGRG 6 cut(s) 487, 4856, 8813, 9343, 11778, 12708
Aor13HI TCCGGA 2 cut(s) 4212, 11113
ApaLI GTGCAC 3 cut(s) 4920, 7535, 7929
ArsI GACNNNNNNTTYG 4 cut(s) 865, 897, 12611, 12643
AseI ATTAAT 3 cut(s) 3674, 4254, 8042
AsiGI ACCGGT 1 cut(s) 10787
Asp700I GAANNNNTTC 5 cut(s) 4943, 7195, 8757, 9456, 12183
Asp718I GGTACC 1 cut(s) 7395
AspA2I CCTAGG 1 cut(s) 10384
AspLEI GCGC 7 cut(s) 1860, 2472, 3662, 4492, 6966, 10944, 11594
AsuC2I CCSGG 6 cut(s) 488, 489, 10501, 12189, 12671, 12735
AsuII TTCGAA 1 cut(s) 12822
AvaI CYCGRG 6 cut(s) 487, 4856, 8813, 9343, 11778, 12708
AvrII CCTAGG 1 cut(s) 10384
AxyI CCTNAGG 3 cut(s) 132, 6243, 6876
BaeGI GKGCMC 3 cut(s) 4924, 7539, 7933
BaeI ACNNNNGTAYC 4 cut(s) 1202, 1235, 4920, 4953
BalI TGGCCA 4 cut(s) 222, 2979, 6130, 10431
BamHI GGATCC 4 cut(s) 226, 290, 404, 5408
BanI GGYRCC 4 cut(s) 3134, 3199, 6425, 7395
BanII GRGCYC 7 cut(s) 63, 6152, 6659, 6750, 11219, 12066, 12715
BarI GAAGNNNNNNTAC 4 cut(s) 6307, 6339, 8547, 8579
BauI CACGAG 2 cut(s) 2628, 11094
Bbv12I GWGCWC 9 cut(s) 583, 2934, 4906, 4924, 5628, 7539, 7933, 12066, 12339
BceAI ACGGC 5 cut(s) 2294, 7690, 9581, 10975, 12559
BcgI CGANNNNNNTGC 8 cut(s) 10, 44, 602, 636, 2081, 2115, 12234, 12268
BciVI GTATCC 3 cut(s) 890, 7006, 7573
BclI TGATCA 3 cut(s) 411, 5971, 9814
BcnI CCSGG 6 cut(s) 488, 489, 10501, 12189, 12671, 12735
BcuI ACTAGT 2 cut(s) 2759, 4088
BfoI RGCGCY 1 cut(s) 2473
BfrI CTTAAG 4 cut(s) 197, 2548, 6346, 7390
BfuAI ACCTGC 4 cut(s) 3379, 6431, 6767, 11467
BfuI GTATCC 3 cut(s) 890, 7006, 7573
BglII AGATCT 7 cut(s) 998, 1133, 3310, 7586, 8834, 9850, 11341
BlnI CCTAGG 1 cut(s) 10384
BlpI GCTNAGC 2 cut(s) 1866, 11433
BmcAI AGTACT 1 cut(s) 797
BmeRI GACNNNNNGTC 2 cut(s) 1270, 11686
BmeT110I CYCGRG 6 cut(s) 487, 4856, 8813, 9343, 11778, 12708
BmrI ACTGGG 7 cut(s) 582, 7426, 7852, 8066, 8723, 10838, 11508
BmuI ACTGGG 7 cut(s) 582, 7426, 7852, 8066, 8723, 10838, 11508
BplI GAGNNNNNCTC 8 cut(s) 2122, 2154, 5280, 5312, 8980, 9012, 10624, 10656
Bpu10I CCTNAGC 1 cut(s) 4133
Bpu1102I GCTNAGC 2 cut(s) 1866, 11433
Bpu14I TTCGAA 1 cut(s) 12822
BpuMI CCSGG 6 cut(s) 488, 489, 10501, 12189, 12671, 12735
Bsa29I ATCGAT 3 cut(s) 1758, 2323, 8431
BsaAI YACGTR 6 cut(s) 52, 1735, 7934, 8465, 8977, 12230
BsaBI GATNNNNATC 6 cut(s) 1841, 2064, 2333, 3493, 8427, 8892
BsaHI GRCGYC 4 cut(s) 5763, 6688, 10962, 11483
BsaI GGTCTC 7 cut(s) 1628, 3397, 5452, 8454, 10090, 10750, 12520
BsaWI WCCGGW 4 cut(s) 4212, 4916, 10787, 11113
Bse118I RCCGGY 2 cut(s) 2712, 10787
Bse21I CCTNAGG 3 cut(s) 132, 6243, 6876
Bse3DI GCAATG 9 cut(s) 793, 2681, 3115, 5260, 6357, 7072, 8640, 10951, 12741
Bse8I GATNNNNATC 6 cut(s) 1841, 2064, 2333, 3493, 8427, 8892
BseAI TCCGGA 2 cut(s) 4212, 11113
BseCI ATCGAT 3 cut(s) 1758, 2323, 8431
BseJI GATNNNNATC 6 cut(s) 1841, 2064, 2333, 3493, 8427, 8892
BseMI GCAATG 9 cut(s) 793, 2681, 3115, 5260, 6357, 7072, 8640, 10951, 12741
BseRI GAGGAG 6 cut(s) 1193, 3354, 4572, 5187, 6873, 9363
BseSI GKGCMC 3 cut(s) 4924, 7539, 7933
BseYI CCCAGC 3 cut(s) 3607, 5056, 8718
BsgI GTGCAG 4 cut(s) 1853, 7188, 8346, 12502
Bsh1236I CGCG 1 cut(s) 3660
Bsh1285I CGRYCG 1 cut(s) 616
BshNI GGYRCC 4 cut(s) 3134, 3199, 6425, 7395
BshTI ACCGGT 1 cut(s) 10787
BshVI ATCGAT 3 cut(s) 1758, 2323, 8431
BsiEI CGRYCG 1 cut(s) 616
BsiHKAI GWGCWC 9 cut(s) 583, 2934, 4906, 4924, 5628, 7539, 7933, 12066, 12339
BsiHKCI CYCGRG 6 cut(s) 487, 4856, 8813, 9343, 11778, 12708
BsiWI CGTACG 1 cut(s) 8461
BsmBI CGTCTC 1 cut(s) 5328
BsmI GAATGC 4 cut(s) 5707, 6398, 10636, 11243
Bso31I GGTCTC 7 cut(s) 1628, 3397, 5452, 8454, 10090, 10750, 12520
BsoBI CYCGRG 6 cut(s) 487, 4856, 8813, 9343, 11778, 12708
Bsp119I TTCGAA 1 cut(s) 12822
Bsp13I TCCGGA 2 cut(s) 4212, 11113
Bsp1407I TGTACA 5 cut(s) 307, 4717, 4743, 9187, 10093
Bsp1720I GCTNAGC 2 cut(s) 1866, 11433
Bsp19I CCATGG 6 cut(s) 206, 650, 668, 5128, 5691, 8514
BspDI ATCGAT 3 cut(s) 1758, 2323, 8431
BspEI TCCGGA 2 cut(s) 4212, 11113
BspFNI CGCG 1 cut(s) 3660
BspHI TCATGA 6 cut(s) 4894, 6565, 6772, 9475, 9898, 11023
BspMAI CTGCAG 6 cut(s) 33, 1825, 1831, 2073, 5669, 10842
BspMI ACCTGC 4 cut(s) 3379, 6431, 6767, 11467
BspQI GCTCTTC 3 cut(s) 1452, 2382, 12054
BspT104I TTCGAA 1 cut(s) 12822
BspT107I GGYRCC 4 cut(s) 3134, 3199, 6425, 7395
BspTI CTTAAG 4 cut(s) 197, 2548, 6346, 7390
BspTNI GGTCTC 7 cut(s) 1628, 3397, 5452, 8454, 10090, 10750, 12520
BsrDI GCAATG 9 cut(s) 793, 2681, 3115, 5260, 6357, 7072, 8640, 10951, 12741
BsrFI RCCGGY 2 cut(s) 2712, 10787
BsrGI TGTACA 5 cut(s) 307, 4717, 4743, 9187, 10093
BssAI RCCGGY 2 cut(s) 2712, 10787
BssNAI GTATAC 4 cut(s) 593, 7863, 10988, 12344
BssNI GRCGYC 4 cut(s) 5763, 6688, 10962, 11483
BssSI CACGAG 2 cut(s) 2628, 11094
Bst1107I GTATAC 4 cut(s) 593, 7863, 10988, 12344
Bst2BI CACGAG 2 cut(s) 2628, 11094
Bst6I CTCTTC 9 cut(s) 1452, 2382, 2427, 5336, 5868, 8946, 9735, 12054, 12804
BstACI GRCGYC 4 cut(s) 5763, 6688, 10962, 11483
BstAFI CTTAAG 4 cut(s) 197, 2548, 6346, 7390
BstAPI GCANNNNNTGC 9 cut(s) 143, 1637, 4700, 6071, 8369, 8846, 10076, 11789, 12480
BstAUI TGTACA 5 cut(s) 307, 4717, 4743, 9187, 10093
BstBAI YACGTR 6 cut(s) 52, 1735, 7934, 8465, 8977, 12230
BstBI TTCGAA 1 cut(s) 12822
BstDSI CCRYGG 6 cut(s) 206, 650, 668, 5128, 5691, 8514
BstEII GGTNACC 4 cut(s) 3397, 3724, 10993, 11324
BstENI CCTNNNNNAGG 1 cut(s) 7450
BstFNI CGCG 1 cut(s) 3660
BstH2I RGCGCY 1 cut(s) 2473
BstHHI GCGC 7 cut(s) 1860, 2472, 3662, 4492, 6966, 10944, 11594
BstMCI CGRYCG 1 cut(s) 616
BstPI GGTNACC 4 cut(s) 3397, 3724, 10993, 11324
BstSLI GKGCMC 3 cut(s) 4924, 7539, 7933
BstSNI TACGTA 3 cut(s) 8465, 8977, 12230
BstUI CGCG 1 cut(s) 3660
BstXI CCANNNNNNTGG 3 cut(s) 693, 6824, 8718
BstZ17I GTATAC 4 cut(s) 593, 7863, 10988, 12344
Bsu15I ATCGAT 3 cut(s) 1758, 2323, 8431
Bsu36I CCTNAGG 3 cut(s) 132, 6243, 6876
BsuI GTATCC 3 cut(s) 890, 7006, 7573
BsuTUI ATCGAT 3 cut(s) 1758, 2323, 8431
BtgI CCRYGG 6 cut(s) 206, 650, 668, 5128, 5691, 8514
BtsI GCAGTG 9 cut(s) 1836, 2463, 3169, 5148, 6973, 8763, 9416, 9569, 10048
BveI ACCTGC 4 cut(s) 3379, 6431, 6767, 11467
CaiI CAGNNNCTG 3 cut(s) 90, 2585, 11464
CciI TCATGA 6 cut(s) 4894, 6565, 6772, 9475, 9898, 11023
CfoI GCGC 7 cut(s) 1860, 2472, 3662, 4492, 6966, 10944, 11594
Cfr10I RCCGGY 2 cut(s) 2712, 10787
Cfr9I CCCGGG 1 cut(s) 487
ClaI ATCGAT 3 cut(s) 1758, 2323, 8431
CseI GACGC 9 cut(s) 373, 1260, 1760, 5771, 6473, 6677, 7607, 10951, 12902
CsiI ACCWGGT 1 cut(s) 10811
CspAI ACCGGT 1 cut(s) 10787
CspCI CAANNNNNGTGG 4 cut(s) 5530, 5565, 9416, 9451
DraI TTTAAA 8 cut(s) 1746, 3966, 4225, 7128, 8008, 8097, 8805, 9787
DraIII CACNNNGTG 2 cut(s) 12480, 12907
DrdI GACNNNNNNGTC 3 cut(s) 3389, 12534, 12548
DriI GACNNNNNGTC 2 cut(s) 1270, 11686
DseDI GACNNNNNNGTC 3 cut(s) 3389, 12534, 12548
EaeI YGGCCR 9 cut(s) 220, 832, 2977, 5529, 6128, 7134, 7323, 9566, 10429
Eam1104I CTCTTC 9 cut(s) 1452, 2382, 2427, 5336, 5868, 8946, 9735, 12054, 12804
Eam1105I GACNNNNNGTC 2 cut(s) 1270, 11686
EarI CTCTTC 9 cut(s) 1452, 2382, 2427, 5336, 5868, 8946, 9735, 12054, 12804
Ecl136II GAGCTC 1 cut(s) 12064
Eco105I TACGTA 3 cut(s) 8465, 8977, 12230
Eco147I AGGCCT 3 cut(s) 1681, 5206, 5995
Eco24I GRGCYC 7 cut(s) 63, 6152, 6659, 6750, 11219, 12066, 12715
Eco31I GGTCTC 7 cut(s) 1628, 3397, 5452, 8454, 10090, 10750, 12520
Eco32I GATATC 6 cut(s) 5881, 7654, 8662, 9516, 9655, 10561
Eco53kI GAGCTC 1 cut(s) 12064
Eco81I CCTNAGG 3 cut(s) 132, 6243, 6876
Eco88I CYCGRG 6 cut(s) 487, 4856, 8813, 9343, 11778, 12708
Eco91I GGTNACC 4 cut(s) 3397, 3724, 10993, 11324
EcoICRI GAGCTC 1 cut(s) 12064
EcoNI CCTNNNNNAGG 1 cut(s) 7450
EcoO109I RGGNCCY 8 cut(s) 73, 2512, 2572, 7077, 8068, 8330, 8991, 10388
EcoO65I GGTNACC 4 cut(s) 3397, 3724, 10993, 11324
EcoRI GAATTC 9 cut(s) 330, 3188, 3455, 5482, 7184, 7300, 9550, 10344, 12818
EcoRV GATATC 6 cut(s) 5881, 7654, 8662, 9516, 9655, 10561
EcoT22I ATGCAT 5 cut(s) 5018, 5399, 6962, 10911, 12743
EcoT38I GRGCYC 7 cut(s) 63, 6152, 6659, 6750, 11219, 12066, 12715
Esp3I CGTCTC 1 cut(s) 5328
FauI CCCGC 4 cut(s) 3113, 3665, 8101, 9267
FauNDI CATATG 3 cut(s) 3816, 4266, 9672
FbaI TGATCA 3 cut(s) 411, 5971, 9814
FblI GTMKAC 6 cut(s) 592, 3430, 7862, 8013, 10987, 12343
FriOI GRGCYC 7 cut(s) 63, 6152, 6659, 6750, 11219, 12066, 12715
FspI TGCGCA 3 cut(s) 4491, 6965, 10943
GlaI GCGC 7 cut(s) 1859, 2471, 3661, 4491, 6965, 10943, 11593
GsaI CCCAGC 3 cut(s) 3611, 5060, 8722
HaeII RGCGCY 1 cut(s) 2473
HgaI GACGC 9 cut(s) 373, 1260, 1760, 5771, 6473, 6677, 7607, 10951, 12902
HhaI GCGC 7 cut(s) 1860, 2472, 3662, 4492, 6966, 10944, 11594
Hin1I GRCGYC 4 cut(s) 5763, 6688, 10962, 11483
Hin6I GCGC 7 cut(s) 1858, 2470, 3660, 4490, 6964, 10942, 11592
HinP1I GCGC 7 cut(s) 1858, 2470, 3660, 4490, 6964, 10942, 11592
HpaI GTTAAC 4 cut(s) 661, 4278, 7848, 8958
Hpy99I CGWCG 6 cut(s) 1149, 1276, 2096, 3432, 11958, 12896
Hsp92I GRCGYC 4 cut(s) 5763, 6688, 10962, 11483
HspAI GCGC 7 cut(s) 1858, 2470, 3660, 4490, 6964, 10942, 11592
KflI GGGWCCC 1 cut(s) 8068
Kpn2I TCCGGA 2 cut(s) 4212, 11113
KpnI GGTACC 1 cut(s) 7399
Ksp22I TGATCA 3 cut(s) 411, 5971, 9814
KspAI GTTAAC 4 cut(s) 661, 4278, 7848, 8958
LguI GCTCTTC 3 cut(s) 1452, 2382, 12054
MabI ACCWGGT 1 cut(s) 10811
MfeI CAATTG 4 cut(s) 6635, 9765, 10467, 12555
MlsI TGGCCA 4 cut(s) 222, 2979, 6130, 10431
MluNI TGGCCA 4 cut(s) 222, 2979, 6130, 10431
Mox20I TGGCCA 4 cut(s) 222, 2979, 6130, 10431
Mph1103I ATGCAT 5 cut(s) 5018, 5399, 6962, 10911, 12743
MroI TCCGGA 2 cut(s) 4212, 11113
MroXI GAANNNNTTC 5 cut(s) 4943, 7195, 8757, 9456, 12183
MscI TGGCCA 4 cut(s) 222, 2979, 6130, 10431
Msp20I TGGCCA 4 cut(s) 222, 2979, 6130, 10431
MspCI CTTAAG 4 cut(s) 197, 2548, 6346, 7390
MunI CAATTG 4 cut(s) 6635, 9765, 10467, 12555
Mva1269I GAATGC 4 cut(s) 5707, 6398, 10636, 11243
MvnI CGCG 1 cut(s) 3660
NciI CCSGG 6 cut(s) 488, 489, 10501, 12189, 12671, 12735
NcoI CCATGG 6 cut(s) 206, 650, 668, 5128, 5691, 8514
NdeI CATATG 3 cut(s) 3816, 4266, 9672
NmeAIII GCCGAG 3 cut(s) 1641, 7162, 12949
NsbI TGCGCA 3 cut(s) 4491, 6965, 10943
NsiI ATGCAT 5 cut(s) 5018, 5399, 6962, 10911, 12743
NspV TTCGAA 1 cut(s) 12822
PaeI GCATGC 3 cut(s) 5648, 6918, 6964
PaeR7I CTCGAG 1 cut(s) 9343
PagI TCATGA 6 cut(s) 4894, 6565, 6772, 9475, 9898, 11023
PaqCI CACCTGC 1 cut(s) 11467
PasI CCCWGGG 1 cut(s) 12861
PceI AGGCCT 3 cut(s) 1681, 5206, 5995
PciI ACATGT 5 cut(s) 973, 3009, 4516, 8413, 12298
PciSI GCTCTTC 3 cut(s) 1452, 2382, 12054
PcsI WCGNNNNNNNCGW 3 cut(s) 1268, 2320, 3253
PctI GAATGC 4 cut(s) 5707, 6398, 10636, 11243
PdmI GAANNNNTTC 5 cut(s) 4943, 7195, 8757, 9456, 12183
Pfl23II CGTACG 1 cut(s) 8461
PflFI GACNNNGTC 2 cut(s) 10014, 10961
PflMI CCANNNNNTGG 7 cut(s) 893, 3985, 5134, 7382, 7577, 7838, 11669
PfoI TCCNGGA 6 cut(s) 3847, 3978, 9231, 9723, 12187, 12733
PinAI ACCGGT 1 cut(s) 10787
Ple19I CGATCG 1 cut(s) 616
Ppu21I YACGTR 6 cut(s) 52, 1735, 7934, 8465, 8977, 12230
PpuMI RGGWCCY 4 cut(s) 2512, 2572, 7077, 8068
PscI ACATGT 5 cut(s) 973, 3009, 4516, 8413, 12298
PshBI ATTAAT 3 cut(s) 3674, 4254, 8042
PsiI TTATAA 3 cut(s) 1424, 1553, 10691
Psp124BI GAGCTC 1 cut(s) 12066
Psp1406I AACGTT 1 cut(s) 12594
Psp5II RGGWCCY 4 cut(s) 2512, 2572, 7077, 8068
PspEI GGTNACC 4 cut(s) 3397, 3724, 10993, 11324
PspFI CCCAGC 3 cut(s) 3607, 5056, 8718
PspLI CGTACG 1 cut(s) 8461
PspPPI RGGWCCY 4 cut(s) 2512, 2572, 7077, 8068
PsrI GAACNNNNNNTAC 6 cut(s) 2237, 2269, 7786, 7818, 11383, 11415
PstI CTGCAG 6 cut(s) 33, 1825, 1831, 2073, 5669, 10842
PstNI CAGNNNCTG 3 cut(s) 90, 2585, 11464
PsyI GACNNNGTC 2 cut(s) 10014, 10961
PvuI CGATCG 1 cut(s) 616
PvuII CAGCTG 8 cut(s) 124, 1793, 1826, 4993, 7061, 8369, 9293, 11231
SacI GAGCTC 1 cut(s) 12066
SalI GTCGAC 2 cut(s) 3429, 8012
SapI GCTCTTC 3 cut(s) 1452, 2382, 12054
ScaI AGTACT 1 cut(s) 797
SexAI ACCWGGT 1 cut(s) 10811
Sfr274I CTCGAG 1 cut(s) 9343
SfuI TTCGAA 1 cut(s) 12822
SlaI CTCGAG 1 cut(s) 9343
SmaI CCCGGG 1 cut(s) 489
SmiI ATTTAAAT 2 cut(s) 3966, 9787
SnaBI TACGTA 3 cut(s) 8465, 8977, 12230
SpeI ACTAGT 2 cut(s) 2759, 4088
SphI GCATGC 3 cut(s) 5648, 6918, 6964
SseBI AGGCCT 3 cut(s) 1681, 5206, 5995
SspI AATATT 9 cut(s) 454, 928, 2670, 4501, 5777, 9299, 11020, 11813, 11889
SstI GAGCTC 1 cut(s) 12066
StuI AGGCCT 3 cut(s) 1681, 5206, 5995
SwaI ATTTAAAT 2 cut(s) 3966, 9787
TaqII GACCGA 2 cut(s) 1308, 3385
TauI GCSGC 6 cut(s) 834, 2470, 2627, 6055, 6610, 7328
TspMI CCCGGG 1 cut(s) 487
Tth111I GACNNNGTC 2 cut(s) 10014, 10961
Van91I CCANNNNNTGG 7 cut(s) 893, 3985, 5134, 7382, 7577, 7838, 11669
Vha464I CTTAAG 4 cut(s) 197, 2548, 6346, 7390
VneI GTGCAC 3 cut(s) 4920, 7535, 7929
VspI ATTAAT 3 cut(s) 3674, 4254, 8042
XagI CCTNNNNNAGG 1 cut(s) 7450
XbaI TCTAGA 2 cut(s) 583, 9649
XcmI CCANNNNNNNNNTGG 6 cut(s) 1909, 2821, 5131, 7750, 8373, 11192
XhoI CTCGAG 1 cut(s) 9343
XmaI CCCGGG 1 cut(s) 487
XmaJI CCTAGG 1 cut(s) 10384
XmiI GTMKAC 6 cut(s) 592, 3430, 7862, 8013, 10987, 12343
XmnI GAANNNNTTC 5 cut(s) 4943, 7195, 8757, 9456, 12183
ZraI GACGTC 1 cut(s) 11484
ZrmI AGTACT 1 cut(s) 797
Zsp2I ATGCAT 5 cut(s) 5018, 5399, 6962, 10911, 12743
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.