Rw7G019940

Vacuolar protein sorting-associated protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
OG0004352
Physical Location & Seq
Reverse (-)
22263816 .. 22300651
36836 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G019940.1

Sequence Viewer

Length: 12987 bp
ATGTTGGAGGATCAGGTGGCGAACCTCTTGCAGAGGTACCTGGGGAACTACGTGAAGGGACTCAATAAAGAGGCCCTCAAGATCAGTGTCTGGCAAGGTGATGTGGAGCTAACAAATATGCAGTTGAAGCCAGAGGCACTGAATGCCTTAAAACTACCTGTGAAGGTCAAGGCAGGATTTCTTGGATCAGTGAAACTTAAGGTTCCATGGAGCAGGCTTGGCCAGGATCCAGTGTTAGTTTCTTTGGATCGCATTTTTCTATTAGCTGAGCCTGAAACGCAAGTTGAGGGAAGCAGTGAGGATGCTGTACAGGAAACTAAGAAAAACCGAGTGCAGGAAATGGAAATGAAGTTGTTGGAGAAGGCGCAACAACTGAAGTCAGATGTGCACAATATTGGAAATTTGAAACTTTCAATTTCAAATATTCACATCAGATACGAGGATCTTGAGAGCAATTTTGGTCATCCGTTTGCAGCGGGCATAACCTTGGAGAGACTTTCAGCCATGACAGTTGATGATAGTGGAAAAGAGACATTTGTTACTGGGGGTGCACTGAACTGTATTCAGAAGTCTGTCGAACTTGATCGGCTTGCACTATATCTGGATTCTGATATTGCTCCATGGCATGTTAACAAGCAATGGGAGGATTTGCTTCCATCAGAGTGGGTCCAGGTTTTTAAATTTGGTACTAAAGATGGTAAACCAGCGAATAAATCGACCAAGAAGCATACTTATGTATTGGAACCTGTTTCTGGAAGTGCTAAGTATTCAAAGCTACGACAAAATGAATTTGCTGATAGTGGTCGGCCTTTACATAAAGCAGCAGTTAATCTGGATGATGTGACTATCTGTTTGCCAAAGGACGGATACAGGGATGTACTGAAGTTAGCTGATAACTTTGCTGCCTTCAATCAGCGGTTGAAGTATGCTCATTATCGTCCACATGTCTCTGTAAAATCTGATCCTAGGTCTTGGTGGAAGTATGCTTACAGAGTTGTTTCTGACCAAATGAAGAAGGCAAGTGGGAAACTGTCATGGGAGCAAGTTCTGAAGTATGCAAGATTACGTAAAAGATATATATCTCTATATGCTTCGCTGCTTAGATCTGACCCTAGTCGGGCAGTGGTTGAAGATAACAAAGACATTGAAGAACTAGATCGTGAACTTGATATTGAACTTATACTGCAGTGGAGGATGTTGGCTCACAAGTTTGTAGAGCAGTCATTAGAGTCAGAACTTGACTCGAGGAAACAAAAAGCAAAGAAATCTTGGTGGTCTGGATGGGGCAGTCAGTCTCTGAAAGATGAGAATGAGCCATTTAGTTTCACTGATGAAGACTGGAAGCAGTTAAATGAAATCATCGGTTATAAGGAAAGTGATGATAGACTGTTGGTTACAGTTGATGAAAAGATGGATGCTCTTCAGACTTCCTTGATCATTTCTATGAAACGTAATGCCACTAAGCTTATTGATGAGTCTCAGGAGTGTCTTGCTGAATTATCGTGTGAAGGCATCGGTTGCTCAATAAAGCTCTATCCAGAAACAAAAGTTTTTGACCTGAACTTGGGATCATATAAGTTATCAACGCCAAACGGTCTCCTTGCTGAGAGTGCAAGTGCTTATGATTCTTTAGTTGGCGTGTTCTGTTTCAAGCCTTTTGACACCAAGGTGGACTGGAGCTTTGTTGCTAAGGCTTCTCCCTGTTATGTGACTTATCTAAAGGATGCAATTGATCAAATTATAAAGTTTTTTCGGAGTAATACAGTTAGTCAGAAGATAGCTATGGATACTGCAGCTGCAGTGCAGATGACAATCGATGGAGTCAAGCGCACAGCTCAGCAACAAGTGAACCGGGCATTGAAGGACCATTCCAGGTTTTTGTTGGACTTGGATATCGCGGCTCCTAAGATTACCATTCCTACTGACTTTTGTCCCGACAATATTCATCCAACAAAACTGATGCTGGACTTGGGAAATTTGGTTATTGGTACCAAGGATGACTATGAGCATGGATCATTGAAGGAGCAAGATATGTATCTGCAGTTTAATTTGGTTCTAAGTGATGTATCTGCTTTTTTGGTTGATGGTGACTACTGTTGGGGCAAATCTCCTGCAAAAAATTCTGCTGGTTCTTCCAACTCAGATGGTGTTAGTTTGTTGCCTTTTATTGATAAGTGTGGGGTAATTCTAACGTTTCAACAGATTAGATTAGAGAGTCCATCCTATCCTGCAACACGACTAGCTGTACGGGTGCCATCGTTGGGGTTTCACTTCTCCCCAGCTCGGTATCATCGATTGATGCAAGTAGTTAAGATCTTTAAGGAGGAGGATAGTGAGACGTCAGATCTCGTTAGCCCTTGGAATCAAGCTGACTTTGAGGGGTGGTCGGCTCTTCTTGTTTTCAAGGGTCTGGGAAATAGGGAAGCAGTGTGGCAGCGGCGCTACCTATGCTTAGTTGGTCCTTTCCTTTATGTACTTGAGAGCCCTAGCTCAAAATCGTACAAGCAATGTATCAGCTTACAAGGGAAACACATATATGAGGTTCCCCCAGAGTCTGTTGGTGATACCGATCTTGTTTTGGCTGTCTGTGATTCTACACGAGCGAATAACAAGGTCGTGGAGGATGCAAATGCACTAATCTTGCTATTTGATTCTGATGATTCAAAGAAAACTTGGCACAGCCGGTTGCGGGGGGCTGTCTATCATGCATCAGCGTCTGCTCCTGTAACTGGTCTATCCGATACTTCGTCAGAATCTGAGGATTCAGTAATGGAGCTTAATGGAAATCCTGATATGGGTGATTTATCAAAAATGGAGAAGATATTCATAACTGGTGTTCTTGATGAACTAAAGGTCTGCGTCAGTTATAGTTATCAGCGTGACCAAAATATCATGAAGGTGCTCCTAACTGAAGAAAGGCGCTTATTTGAACTTCGAGCGATAGGTGGTCAGGTTGAGGTATCAGTTAGATCGAGTGACATCTTTATTGGAACTGTTTTAAAATCTTTGGAGATTGAAGACTTGGTTTCTGGGCACACCCTCTCCCAGCCGCGTTATCTGGCAAGATCATTCATCCATAGTGCCGAAACACTTATAACCTCTGATGCCCCAGGAAATCAGAGTTTTGATGGTTCTGGTTCAATTCGTTTGGAAGGCGATGATAAATTCTATGAGGCAACAGATAATTTGGTCGACTCTGGAAATTTGATATTGAAATCTCCTAGTTTTACTCGTATTGCTGGTCTACTCCCAAGTGATGGAGTTCAAACAACAAACGACATTGCACTCGATGATTCAATGGATAGCTTTGTGAAAGCTCAAGTAGTTATCTATGACCAGAACTCTCCTCTGTATCATAATATGGATATGCAGGTCACAGTCACCCTGGCTACCTTATCATTTTTCTGTCGTCGACCAACAATTCTTGCAATAATGGAATTTGCAAATTCTATTACCATCAAGGATGAAAGCTGTGAAGCTTTCAGTGACAGTTCTTCAACAGCAGCTACGAATCATGACACCAGAGATGATGCAGTTGATGGTTCGCAATCAATGGCAGTCAGCAAGCCTGCTGTTAAAGGATTGCTGGGAAAGGGGAAGTCCAGAGTTGTATTTAATATAACATTAAATATGGCCCGTGCTCAGATTTTATTAATGAATGAGGATGAAACTAAACTTGCTGTTCTGTCACAAGATAATTTACTTACGGATATTAAGGTATTTCCATCCTCTTTTAGTATTAAGGCATCCCTCGGAAATCTTAAGGTAAGTGATGAGAGTCTTCCAAGCAGCCATATGTATTTCTGGGCGTGCGATATGAGAAATCCAGGAGGCAGCTCATTTGTTGAGTTGGTTTTCACTTCATTTAGTGCCGATGATGAAGACTTTGAAGGTTATGAGTATAGCCTCTATGGTCAGCTCTCAGAAGTACGCATTGTATATTTGAATCGATTTATCCAGGAGATTGTTAGTTATTTCATGGGTCTTGTTCCCAAAAACTCAAAAGGAGTCGTGAAGCTAAAAGATCAAGTAACAAATTCAGAGAAGTGGTTTACAACTAGTGATTTTGAAGGATCACCTGCTATAAAGTTGGATCTGTCTCTGAGGAAGCCTATTATATTGATGCCCAGGAGAACGGACAGTCTTGACTACTTGAAGCTTGACATTGTTCATATTACTGTGAAGAGCACCTCTCAATGGTTTGGTGGAAGCAGAAGTGATATTAATGCTGTTCATATGGAAGTATTAACAGTTCAGGTTGAGGATATCAATTTGAATGTTGGTTGTAAAGGAGAAATAGGTGAAAGCATAATTCAAGATGTGAAGGGAGTATCTGTTGTGATTCAAAGGTCACTTAGAGACTTGATGCATCAAATACCAAATGTTGAGGTTCTAATCAAGATGGAGAAATTGAAGGCAGCTTTGTCAAACAGGGAATACCAGATTATTACCGATTGTGCTCAGTCTAATGTTTCTGAAACTCCACATACTGTGCCTCCATTGAACCTTGATTCTGTGACATCTTTAAGTGAGGGTGAAGCCATCACTCAGGATCCAAATGGTACTGCTTTTCCAATTGCAAGTGGGGAAGCCCGGGTCATGATGAAAGTTTGTGTCGTCATTGATTTGGTTGAATTGTGCTTACATACTGGTCTAGGGAGTCTTGCCACTGTGCAGGTTACTGGTGTATGGCTACTCTACAAGACAAATACCCTGGGGGAAGGTTTCCTGTCAGCAACACTCAAGGGTTTCACTGTTCTTGATGATCGTGACGGTACTAAAGAAGAGTTTAGGTTGGCGATAGGAAAGCCTGAGAATATTGGTTCTTGTTCCGTAGATTCTGTGACTTATGATGACACCCAGCACATCACTGATGGAAATGTCGGAAACTTGAATGATATCAATTTAGTTCCTACAATGCTCATTGTCGATGCCAAATTTTGCCAGCTTTTAACATCTGTTTCATTATGCATCCAAAGGCCACAACTTCTTGTTGCACTTGATTTTCTGCTGGCTGTTGCTGAGTTTTTTGTTCCTACAGTCACTGATGCGCTGTCAACTGAAGAAGTAAAGAACTCTGTTTATGGAATTGATGCAATAATTTTGAACCAGTCCACTTACAAGCAACCCTCCACTGAATTATCTCTCACTCCATTAAGACCTTTGGTAGTTGATGATGAAATATATGATCATTTTGTTTATGATGGTAATGGTGGAATATTGCATTTAAAAGATAGGCGGGGGTCCTATGTCTCTGGGCCTAGTACAGAGGCTATTATATACATAGGAGATGGGAAAAGATTGCAATTCAAAAATGTTGTTATCAAGAATGGGCTGTACTTAGATTCATGTATATCCATGGGAAGCAACAGTAGCTATTCAGCTTTAAAGGAAGATCAAGTCTACTTTGCGGGAGAGGATGAAGTTCCTAATTTGAGTTCCTCAAGAGAAAGTCCCAATAATCTGCCATCTCAAAGCATTGCAGTCAACAAATCAACGGAATTTATCATTGAGTTGCAGGTGGTTGGCCCAGAGCTGACATTTTATAATACATCCGAAAAACTTGGGGAATCACTGATGCTCTCTAACCAACTTTTACATGCTCAATTGGATGGATTCTGCAGGCTTGTTTTGAAAGGTGATACCATTGAGATGAATGCAAATGTGCTTGGTTTCACTATGGAGAGTAACGGAATAAGGATTTTGGAGCCTTTTGATACTTCTGTAAAATATTCTAATGCTTCTGGAAGGACCAATATACATATATCTGTTTCAGATATATTTATGAATTTTTCATTCAGCATCCTAAGGCTGTTTTTAGCAGTTGAAGAGGATATTTTGGCTTTTTTAAGCACGACCTCAAAGAAAATAACAGTAGTCTGCTCGCAGTTTGACAAGATTGGAACAATAGAAGATCCCTCCAGTGACCAAATATATGCCCTTTGGAGACCTCATGCACCTCCTGGTTTTGCAGTTCTTGGGGATTATCTGACACCATTGGACAAGCCACCTACAAAGGCAGTTGTTGCTGTAAATACCAATTTTTCCAGAGTGAAGAAGCCCCTATCTTACAAACTAATTTGGCCACCTTTACCTTCTGGGGAGTTGTCTCTTGATGGTGTAAATGATTTGGATGCAATACCAAGTGGTGTCCTTTCTGATGAAAGTAGCTGCTCCATTTGGTTTCCTGAAGCGCCTGCTGGATATGTTGCATTGGGCTGTGTGGTTTGTCCTGGAAGAGCACAACCACCATTATCTTCTGCTTTTTGTATCTCGGCTTCATTAGTTTCTCCTTGTTCCCTGAGGGACTGCATTGCAATTAACACCAACGATCCATATCAGTCAAGTTTAGCATTCTGGCGAGTGGATAATTCTGTTGGGACCTTTTTGCCGGCAGATCTTAGTACTTCTAGCATCACAGGTAGAGCGTATGATTTGCGTCACATCATATTTGGATTTCCTGAACCCTCTGCAAAATCATCCAATAGTTTGAATGCCCATACTTCTTCTCAAAGTCACAATCCGCAGTCAGAAAGATCAGCAACAGTAAACTCTGGTCGCCGGTATGAAGCTGTTGCTAGTTTTCGTTTGATATGGTGGAACCAAGGGTCAAATTCAAGAAAAAGGCTATCGATATGGCGTCCAGTTGTTCCTCCGGGAATGATATACTTTGGTGATATTGCAGTGAAAGGGTATGAACCTCCAAATACCTGCATTGTTCTTCATGATACTGAAGATGAAGAGCTTTTTAAAGCCCCTCTTGATTACCAAATTGTTGGGCAAATTAAAAAACAGAGGGGAATGGAGAGTGTGTCCTTTTGGCTTCCTCAAGCTCCCCCAGGGTTTGTTTCCCTTGGTTGTATTGCATGTAAGGGAACACCTAAGCAATCTGATTTCAGCTTATTAAGATGCATTCGCAGTGATTTGGTAACTGGGGATGAATTTTTAGAGGAGAGTATATGGGATACATCTGATGCCAAGCTTACGAAAGATTCATTCAGTGTATGGGCAGTTGGCAATGAGTTGAGTACCTTTCTAGTTCGTGGTGGTTTGAAGAAACCTCCTAGAAGGTTTGCTTTAAAACTGGCTGATTCTAATGTACCAACTGGTTCAGATCTTACTGTAATAGATGCGGAAATTAGAACCTTTTCTGCAGCACTTTTTGATGACTATGGTGGCTTGATGGTTCCATTGTGTAATTTGTCTTTAAGTGGAATTGGGTTCGGTTTGCATGGAAGAACAGACTACTTGAATTCGACTGTGAGCTTCTCTTTGGCTGCTAGATCATATAATGATAAGTATGAGGTTTGGGAGCCTCTTGTTGAGCCGGTAGATGGATTCCTAAGATACCAATATGATCTCAATGCACCAAGTGCAACATCTCAGTTACGCGTTACATCGACTAGGGATCTGAACTTGAACGTTTCTGTGTCTAATGCTAATATGATAATTCAAGCTTATGCAAGCTGGAACAGTCTCGTTCATGTGCCTGAATATCATAAAAAAAGGGAAGCATTCTCTCCAACAGACGGTGAACGATCTGTTATTGACATCCATCACAGGAGAAACTACGATATAATCCCACAAAACAAGCTAGGTCAGGATATCTTTATTCGAGCTACTGAGTCAAGAGGACTTACAAGCATAATTAAGATGTCATCTGGAGATGTGAGGCCTGTAAAAGTTCCTGTTTCCAAGAATATGTTGGATTCTCATTTGAAAGGAAAACTTTTCCACAAAGTTAGAACAATGGTGACTTTCATCATAGTGGATGGGCAGTTCCCACGGGTTAGAGGGTTGACATCTCCCCATTATACCTTAGCAATCCGTCTCATTCCTGACCAGAGTCTCCCTAGTGAAACAGTGATTCACCAACAAAATGCACGCACTTGCGGAAGCAGCTCGAATCACCTCTCTCCAGAGCTTGAGTTGGTCAAATGGAATGAAATATTTTTCTTTAAAGTTGACGCTCCAGACTACTACTCAGTTGAATTACTTGTGACGGACATGGGGAAAGCAGGGGTCCCTCTTGGATTCTTTTCAGCCCCTCTAAAGCAGATTGTGGGGAATTTTAATCATGATTCATATCCATATGATAATGTAAAGAAGTGGACATCCATTGAATTGTCCTCGGCAGAGTCTATGGATGATAACCATAAGAAATTGGGTGGGAAAATCAGATGTGCTGTATTGCTGTCACCAAGATCTGAAGGAGAGATAAGTGATCAATATGATAACAGTAAAACAAAATCTGGATTTATCCAGATCAGTCCGAGAAGGGAAGGACCTTGGACTACTGTGAGGCTAAACTATGCTGCCCCAGCTGCTTGTTGGCGGTTAGGCAATGATGTTGTTGCTAGTGAAGTACGTGTAAGGGATGGCAATAGATATGTGAATATTAGGTCTCTTGTTTCAGTACGTAACAGTACCGATTTTGTGCTTGATTTGTGTCTTGTACCGAATGTTTCTATGGAAAACGTGAGTTTAACAGACAATTCAAGTACTCCCGAGGGTTTACAGACCCATAGCAACAAATTTCAGACAGATGAGTTCCTTGAAACTGAAAAGTACAGCCCGACCACTGGCTGGGTTGGCTCCATGATTCAACCAAGCCAAGATATGATTGAAGGTGGAGGATCCCATCAGGAATTTCCTACAGTTGAGTTACCACCAGGCTGGGAATGGGTTGATGATTGGCATTTGGATATGGCATCTATTGACACTGCTGATGGCTGGGTCTATGCTCCAGATATTGAAAGTCTAAAATGGCCCGAGTCATTTGATCCATTACGGTTTGTGAACTATGCAAGGCAAAGGAGATGGATCAGGAATAGGAAGCAAAGTACTACGAATCAGGAAATATATGTTGGAACTTTGAAACCTGGAGATACCATACCCCTTCCTCTATGTGGGTTGACACAACCTGGATTGTATGTCTTGCGTTTAAGGCCTTCTGATCTTAGCAATCATGATGAGTATTCTTGGAGTTCAGCGGTGGATGGGTCTGAACAACCAGAAGAGTCTGGTTCGTCAAAAGTATGTCCTGAGATAAGTGTATCGTCTCTTATTGAGTCAGAGAAACTGTTGTATTGCTCACAGATAAGTAGTACTTCTTCAAGTGGTTCCCACAAATTGTGGTTTTGTATGAGTATACAAGCGACAGAAATTGCAAAAGACATTCATTCTGATCCTATCCAGGATTGGAATCTTGTGGTTAAGTCCCCGCTATCTATCTCCAATTTTCTTCCCCTTGCAGCTGAGTTTTCTGTTCTTGAGATGCAAGAAAATGGTGGTTTTGTTGCCTGCTTCAGAGGGGTGTTTTTTCCAGGAAAGACCGTGAATGTTTTTAGTGCTGACATAAGAAAACCTTTATACTTTTCACTGCTTCCACAAAGAGGATGGTTGCCCATCCATGAAGCTGTCCTTTTGTCCCATCCTCATGAAGTTTCATCAAAAACAATAAACTTGAGAAGTTCGATATCTGGAAGGATTGTTCAAATTATTCTTGAGCAGAATTCCGTTGAAGAGCGTCCACTGCAGGCTAAGATCATTAGACTCTATGCTCCTTATTGGTTTTCAATTGCTAGGTGTCCTCCTCTCACATTCAGGCTTGTAGATATAGAAGGGAAGAAAAATACACGAAAGATAGGTGGTCTATTTCAGTCTAAAAAGATTAATGAAGTTGTCCTAGAGGAAATAACTGAAGAGGAAATATATGAAGGTCATACAATTGCTTCAGCTCTGAATTTTAAAATGCTGGGCCTTGCTGTGTCGATTGATCAATCTGGCAACAAGCAGTTTGGACCTGTTAAAGATCTTTCTCCGCTTGGTGACATGGATGGATCATTGGATGTCCCTGCTTATGATGGCGAAGGCAATTGCATGCAGCTTTTTATTACCACGAAACCATGCCTGTATCAATCTGTTCCTACAAAGGTAATATCTGTCCGACCATTTATGACCTTCACCAACAGACTTGGTCGTGATGTATATATCAAGTTATGCAGCGAGGATGAACCAAAAGTCCTTCATCCATGTGATTCAAGAATATCATTTGTATATCGTGTATCAGATGGACCTAATAAACTTCAGGTTCGATTAGGAGACACCAACTGGTCGTTTCCTATTCAAATTGTAAAAGAGGACACAATTTCTCTTGTTTTAAGGAGGCATAATGGTACTCGGACATTTTTGAGGACAGAAATTCGGGGATATGAAGAAGGCTCACGTTTCATCATTGTATTCCGCCTTGGATCATCTAATGGTCCTATCAGAATCGAGAACAGAACTGTCAGCAAAACACTTAGCATTCGCCAGTCTGGGTTTGGTGAAGATGCGTGGGTTCCTCTAGAACCTTTTTCAACAACAAATTTTGCTTGGGAGGACCCATATGGCCAAAGATTCATAGAAGCTAAGGTCGACAATGATCTCTCCACTGGAGTTTGGGAACTTGATTTGGAAACAACAGGCATATGTTCTTCTGAGGAACTCGGATTGCAATTTCATGTTGTAGAAATTGGTGATATCAGGATAGCAAGGTTCAGTGACACCAGAACTACAGATGCAAGTTTGCATGAACAAATTAGGTCTCTGCAGCTTGCTGAAAATTGCGGACCTTCTAACCTGCAGAATACGAATCAGAATAATGGTGCCTCACCTCTTGAGCTTATAATTGAGTTTGGAGTTGTAGGGCTTTCAATTATAGACCATAGACCGAAGGAGGTCTCCTACTTCTATTTTGAGAGAGTCTTCGTATCATATTCGACAGGCTATGATGGTGGGACGACAAGCAGGTTTAAGCTCATACTGGGCCACGTGCAGCTGGACAACCAACTCCCTCTAACATTGATGCCAGTGTTGTTGGCTCCTGAGCCGGACTCTGATATCCATCATCCTGTTGTCAAGATGACTATAACAATGCGTAATGAAAATACTGATGGCATCCAGGTCTACCCTTACATTTATATCCGGGTGACTGAGAAGTGTTGGAGGCTTAATATTCACGAACCAATAATTTGGGCTTTGGTGGATCTGTACAATAATCTACAGTTAGATCGTCTGCCTAAAAGTTCTAGTGTCACAGAAGTTGATCCAGAAATACGCATCGACCTAGTAGACATTTCAGAAGTTAGGCTAAAGGTGTCACTGGAAACAGCACCAGCTCAGAGACCTCATGGGGTTCTAGGAGTATGGAGCCCAATACTATCTGCAGTTGGAAATGCATTCAAGATTCAGGTGCATCTGAGGAGGGTGATGCACAAAGACAGATTCATGCGGAGAAGTTCCATTGTCTCTGCCATTGGTAACCGCGTTTGGAGAGACTTGATCCATAATCCTCTACATTTGATATTTTCAGTTGATGTTCTTGGTATGACAAGTTCAACTTTGGCTTCTCTTAGTAAAGGGTTTGCTGAGCTCTCAACTGATGGGCAGTTTACTCACCTACGGTCAAAACAGGTATTTTCAAGGAGAATTACGGGGGTGGGTGATGGAATCATTCAAGGCACAGAAGCATTTGTGCAAGGTGTTGCTTTTGGCGTATCTGGAGTAGTGAAAAAGCCAGTTGAGAGTGCAAGACAGAACGGTCTGTCAGGACTTTTTCACGGGATTGGACGTGCATTCCTGGGAGTTATTGTGCAACCAATGAGTGGGGCATTGGACTTTTTCTCCTTGACTGTTGATGGAATTGGAGCAAGTTGTTCGAAATGCCTAGAGGTCTTCAATAGCAAGACAACATTCCAGAGAATTAGAAACCCCCGGGCAATCCGTGCCAATGGTATACTTACAGAGTATTCTGAGAGAGAGGCAGTTGGACAGATGATTTTATACCTTGCAGAAGCACATCGGCACTTTGGTTGTACTGAAATATTCAAGGAGCCCTCAAAGTTTGCTTGGTCTGATTATTATGAAGAGCATTTTGTTGTGCCTTACCAGCGGATTGTTTTAGTGACCAATAAGCGAGTGATGTTGCTTCAGTGTTTGGCTCCAGACAAAATGGACAAGAAACCGTGCAAGATTATGTGGGATGTGCCTTGGGAAGAGCTTATGGCAGTGGAGTTGGCTAAAGCAGGTCACAATCAGCCATCTCACTTGATCCTCCACCTCAAAAGTTTTAGGAGATCAGAGAATTTTGTCCGGGTCATAAAGTGCAGTGTTGAAGATGAAGTAGAGGGAAGGGAACCCCAGGCTGTTAGAATCTGTTCTGCAGCATGTAGGATGTGGAAAGCAAACCAGTCTGCCATGAAAAGCCTGATGTTGAAGGTTCCATCAAGTCAGCGACATGTGTATTTTGCCTGGTCTGAAGCCGAGGGGAGAGAAAAACGTACTCTGAACAAAGCAGTGACTAGGCTGAGAGAGCTCCCGTCATACAGTTCTGCATCAGATGGTAGAAGATTTGTTAAACACAGCATCAACTTTTCAAAGATTTGGAGCAGTGAACAAGAATCCAGAGGTCGATGCACATTGTGCAAAAAGCAGGTTTTGGAAGATGCTGGATTATGTAGCATTTGGAGACCCATTTGTCCTGACGGGTATGTCTCTATTGGAGATATTGCTCACATTGGCAGCCATCCTCCAAACGTTGCTGCAGTTTACCGTAAAATTGACAGGTTGTTTGCACTTCCAGTTGGATACGACCTGGTGTGGAGAAATTGTTTGGATGACTATGCAACACCAGTATCAATTTGGCATCCTAGAGCTCCAGAAGGATTCGTATCTCCTGGATGCATAGCTGTGGCTGGTTTTGTTGAGCCAGAACCTGATTTGGTTCACTGTGTTGCTATATCACTTGCTGAGGAGACAGAATTTGAAGAGCAAAAGGTTTGGTCAGCTTCAGATTCTTATCCATGGGCATGTCACATTTATCAAGTCCGCAGTGAAGCTCTTCACTTCGTGGCATTAAGAACAAGCAAGGAAGAATCTGACTGGAAACCTATGAGGATTCTTGATGATCCTCAGCCCCTATTGCAGTCATTGAAAGAGCACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Chorein_N PH Pex24p SHR-BD VPS13 VPS13_C VPS13_mid_rpt Vps62

Protein Analysis

4328

Amino Acids

483.32

Weight (kDa)

5.67

Isoelectric Point (pI)

43.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
VPS13_N PF12624 1 - 527 2.8e-96 VPS13-like family N-terminal region
VPS13_N PF12624 548 - 663 4e-09 VPS13-like family N-terminal region
PH PF00169 792 - 900 1.2e-07 PH domain
VPS13_M PF25033 1308 - 1953 3e-09 VPS13-like family middle region
Vps62 PF06101 1961 - 2121 2.7e-09 Vacuolar protein sorting-associated protein 62
Vps62 PF06101 2191 - 2338 9.7e-11 Vacuolar protein sorting-associated protein 62
VPS13_VAB PF25036 2929 - 3191 2.3e-08 Vacuolar-sorting associated protein 13, adaptor binding domain
VPS13_VAB PF25036 3289 - 3465 1.1e-08 Vacuolar-sorting associated protein 13, adaptor binding domain
VPS13_C PF25037 3916 - 4024 1e-12 Intermembrane lipid transfer protein VPS13, C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 5 cut(s) 1368, 1742, 3095, 5547, 10670
AarI CACCTGC 2 cut(s) 4087, 5509
AasI GACNNNNNNGTC 3 cut(s) 11583, 12519, 12533
AatII GACGTC 1 cut(s) 2342
Acc36I ACCTGC 9 cut(s) 3361, 4087, 4666, 5509, 6719, 10632, 10782, 12059, 12466
Acc65I GGTACC 2 cut(s) 36, 1988
AccB1I GGYRCC 4 cut(s) 36, 1988, 2251, 10649
AccB7I CCANNNNNTGG 3 cut(s) 3257, 8586, 11648
AccI GTMKAC 9 cut(s) 3192, 3244, 3412, 5403, 9151, 10419, 10950, 11115, 11779
AccII CGCG 4 cut(s) 1898, 3052, 7392, 11310
AclI AACGTT 3 cut(s) 2192, 7422, 12579
AcoI YGGCCR 3 cut(s) 220, 6083, 10393
AcvI CACGTG 1 cut(s) 10816
AcyI GRCGYC 2 cut(s) 2339, 6640
AdeI CACNNNGTG 3 cut(s) 7373, 12465, 12892
AflII CTTAAG 2 cut(s) 197, 3761
AflIII ACRYGT 4 cut(s) 943, 7390, 8368, 12280
AhlI ACTAGT 1 cut(s) 4058
AjiI CACGTC 1 cut(s) 11615
AjuI GAANNNNNNNTTGG 2 cut(s) 8850, 8882
AleI CACNNNNGTG 1 cut(s) 1667
AloI GAACNNNNNNTCC 6 cut(s) 7763, 7795, 9477, 9509, 10008, 10040
Alw44I GTGCAC 2 cut(s) 386, 549
AlwNI CAGNNNCTG 7 cut(s) 90, 1297, 2555, 2717, 2756, 5045, 12758
Ama87I CYCGRG 5 cut(s) 1243, 4593, 8507, 8771, 11757
ApaLI GTGCAC 2 cut(s) 386, 549
ArsI GACNNNNNNTTYG 6 cut(s) 835, 867, 1664, 1696, 12596, 12628
AseI ATTAAT 3 cut(s) 3653, 4224, 9675
Asp700I GAANNNNTTC 4 cut(s) 2822, 7147, 12199, 12882
Asp718I GGTACC 2 cut(s) 36, 1988
AspA2I CCTAGG 1 cut(s) 965
AspLEI GCGC 6 cut(s) 367, 1830, 2442, 2922, 5053, 6196
AsuC2I CCSGG 8 cut(s) 1853, 4594, 4595, 6657, 10970, 11758, 11759, 12137
AsuII TTCGAA 1 cut(s) 11702
AvaI CYCGRG 5 cut(s) 1243, 4593, 8507, 8771, 11757
AvrII CCTAGG 1 cut(s) 965
AxyI CCTNAGG 2 cut(s) 5807, 6302
BaeGI GKGCMC 3 cut(s) 390, 553, 3036
BaeI ACNNNNGTAYC 4 cut(s) 5709, 5742, 12660, 12693
BalI TGGCCA 3 cut(s) 222, 6085, 10395
BamHI GGATCC 3 cut(s) 226, 4552, 8636
BanI GGYRCC 4 cut(s) 36, 1988, 2251, 10649
BanII GRGCYC 6 cut(s) 2486, 11198, 11418, 11880, 12360, 12700
BarI GAAGNNNNNNTAC 6 cut(s) 971, 1003, 6262, 6294, 9097, 9129
BauI CACGAG 1 cut(s) 2598
BbrPI CACGTG 1 cut(s) 10816
BbsI GAAGAC 6 cut(s) 1341, 3024, 3773, 3888, 10741, 11710
BbvCI CCTCAGC 2 cut(s) 12792, 12954
BcgI CGANNNNNNTGC 4 cut(s) 10, 44, 11682, 11716
BciVI GTATCC 4 cut(s) 860, 1780, 6958, 12623
BclI TGATCA 5 cut(s) 1434, 1732, 5188, 8224, 9778
BcnI CCSGG 8 cut(s) 1853, 4594, 4595, 6657, 10970, 11758, 11759, 12137
BcuI ACTAGT 1 cut(s) 4058
BfoI RGCGCY 3 cut(s) 2443, 2923, 6197
BfrI CTTAAG 2 cut(s) 197, 3761
BfuAI ACCTGC 9 cut(s) 3361, 4087, 4666, 5509, 6719, 10632, 10782, 12059, 12466
BfuI GTATCC 4 cut(s) 860, 1780, 6958, 12623
BglII AGATCT 7 cut(s) 1103, 2313, 2344, 6397, 7114, 8204, 9814
BlnI CCTAGG 1 cut(s) 965
BlpI GCTNAGC 3 cut(s) 267, 1836, 11412
BmcAI AGTACT 4 cut(s) 6406, 8503, 8845, 9109
BmeT110I CYCGRG 5 cut(s) 1243, 4593, 8507, 8771, 11757
BmgBI CACGTC 1 cut(s) 11615
BmrI ACTGGG 3 cut(s) 552, 6942, 10817
BmuI ACTGGG 3 cut(s) 552, 6942, 10817
BoxI GACNNNNGTC 3 cut(s) 1113, 1929, 7845
BpiI GAAGAC 6 cut(s) 1341, 3024, 3773, 3888, 10741, 11710
BplI GAGNNNNNCTC 4 cut(s) 4177, 4209, 10862, 10894
Bpu10I CCTNAGC 7 cut(s) 1689, 6882, 7819, 10413, 10869, 12792, 12954
Bpu1102I GCTNAGC 3 cut(s) 267, 1836, 11412
Bpu14I TTCGAA 1 cut(s) 11702
BpuMI CCSGG 8 cut(s) 1853, 4594, 4595, 6657, 10970, 11758, 11759, 12137
Bsa29I ATCGAT 4 cut(s) 1815, 2293, 3949, 6632
BsaAI YACGTR 5 cut(s) 52, 1067, 8369, 8420, 10816
BsaHI GRCGYC 2 cut(s) 2339, 6640
BsaI GGTCTC 7 cut(s) 1601, 5941, 8409, 10593, 10729, 11161, 12505
Bse118I RCCGGY 4 cut(s) 2682, 6391, 6561, 7327
Bse21I CCTNAGG 2 cut(s) 5807, 6302
Bse3DI GCAATG 7 cut(s) 644, 2513, 3279, 5478, 6312, 7024, 8350
BseCI ATCGAT 4 cut(s) 1815, 2293, 3949, 6632
BseMI GCAATG 7 cut(s) 644, 2513, 3279, 5478, 6312, 7024, 8350
BseRI GAGGAG 6 cut(s) 2339, 3336, 6965, 9585, 11260, 12809
BseSI GKGCMC 3 cut(s) 390, 553, 3036
BseYI CCCAGC 9 cut(s) 2278, 3045, 3586, 4860, 8320, 8586, 8676, 8733, 9757
BsgI GTGCAG 5 cut(s) 353, 1823, 4694, 10838, 12169
Bsh1236I CGCG 4 cut(s) 1898, 3052, 7392, 11310
BshNI GGYRCC 4 cut(s) 36, 1988, 2251, 10649
BshVI ATCGAT 4 cut(s) 1815, 2293, 3949, 6632
BsiHKCI CYCGRG 5 cut(s) 1243, 4593, 8507, 8771, 11757
BsmBI CGTCTC 3 cut(s) 2330, 7835, 9066
BsmI GAATGC 9 cut(s) 148, 5662, 6353, 6499, 6912, 7514, 10308, 11222, 11618
Bso31I GGTCTC 7 cut(s) 1601, 5941, 8409, 10593, 10729, 11161, 12505
BsoBI CYCGRG 5 cut(s) 1243, 4593, 8507, 8771, 11757
Bsp119I TTCGAA 1 cut(s) 11702
Bsp1407I TGTACA 2 cut(s) 307, 11034
Bsp1720I GCTNAGC 3 cut(s) 267, 1836, 11412
Bsp19I CCATGG 4 cut(s) 206, 620, 5358, 12845
BspDI ATCGAT 4 cut(s) 1815, 2293, 3949, 6632
BspFNI CGCG 4 cut(s) 1898, 3052, 7392, 11310
BspHI TCATGA 7 cut(s) 2892, 3514, 4599, 6724, 8077, 8968, 9439
BspMI ACCTGC 9 cut(s) 3361, 4087, 4666, 5509, 6719, 10632, 10782, 12059, 12466
BspT104I TTCGAA 1 cut(s) 11702
BspT107I GGYRCC 4 cut(s) 36, 1988, 2251, 10649
BspTI CTTAAG 2 cut(s) 197, 3761
BspTNI GGTCTC 7 cut(s) 1601, 5941, 8409, 10593, 10729, 11161, 12505
BsrDI GCAATG 7 cut(s) 644, 2513, 3279, 5478, 6312, 7024, 8350
BsrFI RCCGGY 4 cut(s) 2682, 6391, 6561, 7327
BsrGI TGTACA 2 cut(s) 307, 11034
BssAI RCCGGY 4 cut(s) 2682, 6391, 6561, 7327
BssNAI GTATAC 2 cut(s) 9152, 11780
BssNI GRCGYC 2 cut(s) 2339, 6640
BssSI CACGAG 1 cut(s) 2598
Bst1107I GTATAC 2 cut(s) 9152, 11780
Bst2BI CACGAG 1 cut(s) 2598
BstACI GRCGYC 2 cut(s) 2339, 6640
BstAFI CTTAAG 2 cut(s) 197, 3761
BstAPI GCANNNNNTGC 6 cut(s) 143, 1518, 6026, 7373, 11768, 12465
BstAUI TGTACA 2 cut(s) 307, 11034
BstBAI YACGTR 5 cut(s) 52, 1067, 8369, 8420, 10816
BstBI TTCGAA 1 cut(s) 11702
BstDSI CCRYGG 5 cut(s) 206, 620, 5358, 7784, 12845
BstEII GGTNACC 1 cut(s) 11303
BstFNI CGCG 4 cut(s) 1898, 3052, 7392, 11310
BstH2I RGCGCY 3 cut(s) 2443, 2923, 6197
BstHHI GCGC 6 cut(s) 367, 1830, 2442, 2922, 5053, 6196
BstNSI RCATGY 8 cut(s) 629, 947, 5603, 6870, 9886, 12213, 12284, 12855
BstPAI GACNNNNGTC 3 cut(s) 1113, 1929, 7845
BstPI GGTNACC 1 cut(s) 11303
BstSLI GKGCMC 3 cut(s) 390, 553, 3036
BstSNI TACGTA 2 cut(s) 1067, 8420
BstUI CGCG 4 cut(s) 1898, 3052, 7392, 11310
BstV2I GAAGAC 6 cut(s) 1341, 3024, 3773, 3888, 10741, 11710
BstXI CCANNNNNNTGG 4 cut(s) 663, 6776, 8676, 11016
BstZ17I GTATAC 2 cut(s) 9152, 11780
Bsu15I ATCGAT 4 cut(s) 1815, 2293, 3949, 6632
Bsu36I CCTNAGG 2 cut(s) 5807, 6302
BsuI GTATCC 4 cut(s) 860, 1780, 6958, 12623
BsuTUI ATCGAT 4 cut(s) 1815, 2293, 3949, 6632
BtgI CCRYGG 5 cut(s) 206, 620, 5358, 7784, 12845
BtgZI GCGATG 1 cut(s) 3171
BtrI CACGTC 1 cut(s) 11615
BveI ACCTGC 9 cut(s) 3361, 4087, 4666, 5509, 6719, 10632, 10782, 12059, 12466
CaiI CAGNNNCTG 7 cut(s) 90, 1297, 2555, 2717, 2756, 5045, 12758
CciI TCATGA 7 cut(s) 2892, 3514, 4599, 6724, 8077, 8968, 9439
CfoI GCGC 6 cut(s) 367, 1830, 2442, 2922, 5053, 6196
Cfr10I RCCGGY 4 cut(s) 2682, 6391, 6561, 7327
Cfr9I CCCGGG 2 cut(s) 4593, 11757
ClaI ATCGAT 4 cut(s) 1815, 2293, 3949, 6632
CseI GACGC 6 cut(s) 2703, 2848, 6428, 6629, 7976, 9518
CsiI ACCWGGT 1 cut(s) 12636
DraI TTTAAA 8 cut(s) 679, 3000, 5229, 5388, 6751, 7080, 7960, 9751
DraIII CACNNNGTG 3 cut(s) 7373, 12465, 12892
DrdI GACNNNNNNGTC 3 cut(s) 11583, 12519, 12533
DseDI GACNNNNNNGTC 3 cut(s) 11583, 12519, 12533
EaeI YGGCCR 3 cut(s) 220, 6083, 10393
EciI GGCGGA 1 cut(s) 10235
Ecl136II GAGCTC 3 cut(s) 11416, 12358, 12698
Eco105I TACGTA 2 cut(s) 1067, 8420
Eco147I AGGCCT 2 cut(s) 7675, 8950
Eco24I GRGCYC 6 cut(s) 2486, 11198, 11418, 11880, 12360, 12700
Eco31I GGTCTC 7 cut(s) 1601, 5941, 8409, 10593, 10729, 11161, 12505
Eco32I GATATC 7 cut(s) 1894, 4267, 4900, 7606, 9480, 10525, 10885
Eco53kI GAGCTC 3 cut(s) 11416, 12358, 12698
Eco72I CACGTG 1 cut(s) 10816
Eco81I CCTNAGG 2 cut(s) 5807, 6302
Eco88I CYCGRG 5 cut(s) 1243, 4593, 8507, 8771, 11757
Eco91I GGTNACC 1 cut(s) 11303
EcoICRI GAGCTC 3 cut(s) 11416, 12358, 12698
EcoO109I RGGNCCY 6 cut(s) 73, 5244, 6381, 8023, 8285, 10384
EcoO65I GGTNACC 1 cut(s) 11303
EcoRI GAATTC 2 cut(s) 7252, 9514
EcoRV GATATC 7 cut(s) 1894, 4267, 4900, 7606, 9480, 10525, 10885
EcoT22I ATGCAT 6 cut(s) 2710, 4371, 4973, 6914, 11224, 12728
EcoT38I GRGCYC 6 cut(s) 2486, 11198, 11418, 11880, 12360, 12700
Esp3I CGTCTC 3 cut(s) 2330, 7835, 9066
FauI CCCGC 5 cut(s) 469, 2682, 5232, 5404, 9231
FauNDI CATATG 5 cut(s) 3795, 4236, 8092, 10390, 10472
FbaI TGATCA 5 cut(s) 1434, 1732, 5188, 8224, 9778
FblI GTMKAC 9 cut(s) 3192, 3244, 3412, 5403, 9151, 10419, 10950, 11115, 11779
FriOI GRGCYC 6 cut(s) 2486, 11198, 11418, 11880, 12360, 12700
GlaI GCGC 6 cut(s) 366, 1829, 2441, 2921, 5052, 6195
GsaI CCCAGC 9 cut(s) 2282, 3049, 3590, 4864, 8324, 8590, 8680, 8737, 9761
HaeII RGCGCY 3 cut(s) 2443, 2923, 6197
HgaI GACGC 6 cut(s) 2703, 2848, 6428, 6629, 7976, 9518
HhaI GCGC 6 cut(s) 367, 1830, 2442, 2922, 5053, 6196
Hin1I GRCGYC 2 cut(s) 2339, 6640
Hin6I GCGC 6 cut(s) 365, 1828, 2440, 2920, 5051, 6194
HinP1I GCGC 6 cut(s) 365, 1828, 2440, 2920, 5051, 6194
HincII GTYRAC 9 cut(s) 631, 3193, 3413, 5058, 5488, 7800, 7966, 8916, 10420
HindII GTYRAC 9 cut(s) 631, 3193, 3413, 5058, 5488, 7800, 7966, 8916, 10420
HindIII AAGCTT 5 cut(s) 1463, 3477, 4157, 6980, 7455
HpaI GTTAAC 1 cut(s) 631
Hpy99I CGWCG 1 cut(s) 3414
Hsp92I GRCGYC 2 cut(s) 2339, 6640
HspAI GCGC 6 cut(s) 365, 1828, 2440, 2920, 5051, 6194
KflI GGGWCCC 1 cut(s) 8023
KpnI GGTACC 2 cut(s) 40, 1992
KroI GCCGGC 1 cut(s) 6391
KroNI GCCGGC 1 cut(s) 6393
Ksp22I TGATCA 5 cut(s) 1434, 1732, 5188, 8224, 9778
KspAI GTTAAC 1 cut(s) 631
MabI ACCWGGT 1 cut(s) 12636
MfeI CAATTG 6 cut(s) 1728, 4575, 5606, 9579, 9729, 9877
MlsI TGGCCA 3 cut(s) 222, 6085, 10395
MluI ACGCGT 1 cut(s) 7390
MluNI TGGCCA 3 cut(s) 222, 6085, 10395
Mox20I TGGCCA 3 cut(s) 222, 6085, 10395
Mph1103I ATGCAT 6 cut(s) 2710, 4371, 4973, 6914, 11224, 12728
MroNI GCCGGC 1 cut(s) 6391
MroXI GAANNNNTTC 4 cut(s) 2822, 7147, 12199, 12882
MscI TGGCCA 3 cut(s) 222, 6085, 10395
Msp20I TGGCCA 3 cut(s) 222, 6085, 10395
MspA1I CMGCKG 9 cut(s) 476, 916, 1796, 2437, 8324, 8993, 9257, 10822, 11935
MspCI CTTAAG 2 cut(s) 197, 3761
MunI CAATTG 6 cut(s) 1728, 4575, 5606, 9579, 9729, 9877
Mva1269I GAATGC 9 cut(s) 148, 5662, 6353, 6499, 6912, 7514, 10308, 11222, 11618
MvnI CGCG 4 cut(s) 1898, 3052, 7392, 11310
NaeI GCCGGC 1 cut(s) 6393
NciI CCSGG 8 cut(s) 1853, 4594, 4595, 6657, 10970, 11758, 11759, 12137
NcoI CCATGG 4 cut(s) 206, 620, 5358, 12845
NdeI CATATG 5 cut(s) 3795, 4236, 8092, 10390, 10472
NgoMIV GCCGGC 1 cut(s) 6391
NmeAIII GCCGAG 3 cut(s) 6254, 8111, 12331
NsiI ATGCAT 6 cut(s) 2710, 4371, 4973, 6914, 11224, 12728
NspI RCATGY 8 cut(s) 629, 947, 5603, 6870, 9886, 12213, 12284, 12855
NspV TTCGAA 1 cut(s) 11702
OliI CACNNNNGTG 1 cut(s) 1667
PaeI GCATGC 1 cut(s) 9886
PaeR7I CTCGAG 1 cut(s) 1243
PagI TCATGA 7 cut(s) 2892, 3514, 4599, 6724, 8077, 8968, 9439
PaqCI CACCTGC 2 cut(s) 4087, 5509
PasI CCCWGGG 2 cut(s) 4714, 6839
PceI AGGCCT 2 cut(s) 7675, 8950
PciI ACATGT 2 cut(s) 943, 12280
PcsI WCGNNNNNNNCGW 1 cut(s) 2290
PctI GAATGC 9 cut(s) 148, 5662, 6353, 6499, 6912, 7514, 10308, 11222, 11618
PdiI GCCGGC 1 cut(s) 6393
PdmI GAANNNNTTC 4 cut(s) 2822, 7147, 12199, 12882
PflFI GACNNNGTC 1 cut(s) 9978
PflMI CCANNNNNTGG 3 cut(s) 3257, 8586, 11648
PfoI TCCNGGA 7 cut(s) 3826, 3957, 6232, 6655, 9195, 9325, 12718
PmaCI CACGTG 1 cut(s) 10816
PmlI CACGTG 1 cut(s) 10816
Ppu21I YACGTR 5 cut(s) 52, 1067, 8369, 8420, 10816
PpuMI RGGWCCY 5 cut(s) 5244, 6381, 8023, 8285, 10384
PscI ACATGT 2 cut(s) 943, 12280
PshAI GACNNNNGTC 3 cut(s) 1113, 1929, 7845
PshBI ATTAAT 3 cut(s) 3653, 4224, 9675
PsiI TTATAA 5 cut(s) 1368, 1742, 3095, 5547, 10670
Psp124BI GAGCTC 3 cut(s) 11418, 12360, 12700
Psp1406I AACGTT 3 cut(s) 2192, 7422, 12579
Psp5II RGGWCCY 5 cut(s) 5244, 6381, 8023, 8285, 10384
PspCI CACGTG 1 cut(s) 10816
PspEI GGTNACC 1 cut(s) 11303
PspFI CCCAGC 9 cut(s) 2278, 3045, 3586, 4860, 8320, 8586, 8676, 8733, 9757
PspPPI RGGWCCY 5 cut(s) 5244, 6381, 8023, 8285, 10384
PspXI VCTCGAGB 1 cut(s) 1243
PsrI GAACNNNNNNTAC 4 cut(s) 4236, 4268, 11362, 11394
PstNI CAGNNNCTG 7 cut(s) 90, 1297, 2555, 2717, 2756, 5045, 12758
PsyI GACNNNGTC 1 cut(s) 9978
PvuII CAGCTG 4 cut(s) 1796, 8324, 9257, 10822
SacI GAGCTC 3 cut(s) 11418, 12360, 12700
SalI GTCGAC 3 cut(s) 3191, 3411, 10418
ScaI AGTACT 4 cut(s) 6406, 8503, 8845, 9109
SexAI ACCWGGT 1 cut(s) 12636
Sfr274I CTCGAG 1 cut(s) 1243
SfuI TTCGAA 1 cut(s) 11702
SlaI CTCGAG 1 cut(s) 1243
SmaI CCCGGG 2 cut(s) 4595, 11759
SnaBI TACGTA 2 cut(s) 1067, 8420
SpeI ACTAGT 1 cut(s) 4058
SphI GCATGC 1 cut(s) 9886
SseBI AGGCCT 2 cut(s) 7675, 8950
SstI GAGCTC 3 cut(s) 11418, 12360, 12700
StuI AGGCCT 2 cut(s) 7675, 8950
TaqII GACCGA 1 cut(s) 10729
TauI GCSGC 3 cut(s) 1901, 2440, 3052
TspMI CCCGGG 2 cut(s) 4593, 11757
Tth111I GACNNNGTC 1 cut(s) 9978
Van91I CCANNNNNTGG 3 cut(s) 3257, 8586, 11648
Vha464I CTTAAG 2 cut(s) 197, 3761
VneI GTGCAC 2 cut(s) 386, 549
VspI ATTAAT 3 cut(s) 3653, 4224, 9675
XbaI TCTAGA 1 cut(s) 10348
XceI RCATGY 8 cut(s) 629, 947, 5603, 6870, 9886, 12213, 12284, 12855
XcmI CCANNNNNNNNNTGG 7 cut(s) 1879, 7702, 8328, 8679, 9396, 10322, 12681
XhoI CTCGAG 1 cut(s) 1243
XmaI CCCGGG 2 cut(s) 4593, 11757
XmaJI CCTAGG 1 cut(s) 965
XmiI GTMKAC 9 cut(s) 3192, 3244, 3412, 5403, 9151, 10419, 10950, 11115, 11779
XmnI GAANNNNTTC 4 cut(s) 2822, 7147, 12199, 12882
ZraI GACGTC 1 cut(s) 2340
ZrmI AGTACT 4 cut(s) 6406, 8503, 8845, 9109
Zsp2I ATGCAT 6 cut(s) 2710, 4371, 4973, 6914, 11224, 12728
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.