Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0005801

Physical Location & Seq

Genomic Coordinates Reverse (-)

12913632 .. 12921494

Gene Structure 7863 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g21450.t6

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2196 bp

ATGGGCACTAGCTTATTATCCAACGAATGTATTTCGGGTCGGGTCCGGGTCATCCCTGTGCGCCTAATACACTCGGCTGACCCCAAAAATCAAACAGTAGCAGAAAGAGCGAGAAGAATGTCACAGTTCTGGAGACCAGGGGCGGAGAAGCCTCGCCTCCTCGACGACGAAGAAGGCGGCGTCGTTTTCTTCGCCAACTCCTCCGGAGGAGGCTATGCGAATCTGGAGAGGCAGAGGCAGAGGCTACCGGTGTTCAAGTACCGCACCGTCATTCTCTACTCCGTCGAGACTCGCGCCACTACCGTCGTCGTCGGCGAAACCGGCAGCGGCAAAACCACTCAGATTCCTCAGTACCTGAAAGAAGCAGGCTGGGCTGACGGTGGCCGTGTGATTGCTTGTACTCAGCCGAGAAGATTGGCTGTTCAGTCGGTTGCAGCGCGGGTGGCTGAAGAAATGGGGGTGAAGCTTGGAGAGGAAGTTGGCTACACTATTCGGTTTGAAGATGCTACAAGTACAGGTGTAACTATGATAAAGTTTTTGACTGATGGTGTGTTACTCAGGGAAATGATGGACGATCCTCTTTTGACTAAATACAGTGTCGTAATGGTAGATGAAGCTCATGAAAGGTCTATCTCAACGGACATTTTATTGGGTCTCCTGAAAAAGATCCAAAAACGCCGGCCTGAGCTGCGCCTCATTATCTCATCTGCTACAATTCAAGCAAAGTCAATGGCTGCTTTCTTTCAGGCCAGCAAAAGACGCCGCAGACCGGAAGGAGAAGAGCTTGGACCAATCATGGAACCTGCAGTCTTATCAGTTGAAGGTAGAGGGTTTAATGTACAAATTCATTACGTGGAGGAGCCTGTTGCCGACTATCTTCGGGCTGCAGTCTCAACGGTATTATTGATACATGACCAGGAACCAATGGGAGATATTCTGGTGTTTCTTACTGGTCAAGATGATATTGATGCTGCTGTCCAACTTATTACGGAAGAAGCTCAAAACCGTAGAAAGAACTCGTCAGGACTGATGGTTTTGCCTCTCTATTCGGGACTTCCACGTGGTGACCAGGAGCTGGTGTTCGCTCCTACTCCTAGAGGGAAAAGGAAAGTAGTTATATCAACCAACATAGCAGAGACATCAATAACTTTAGAGGGCGTGGTCTATGTTGTTGACAGTGGGTTCTCAAAGCAGCGGTTCTATAACCCGATATCAGATATTGAAAATCTGGTAGTGGCACCAATATCCAAGGCATCTGCTAGGCAAAGGACCGGTAGAGCTGGCAGAGTTCGGCCTGGGAAATGTTACAGGCTTTATACAGAAGAGTATTTTGTAAAGGAAATGTCTTCTGAGGGGATTCCAGAGATACAAAGATCAAATCTTGTTTCCTGTGTGATCCAGTTAAAAGCGTTGGGCATAGATAATATATTGGGCTTTAATTGGCCAGCATCTCCATCGTCTGAAGCAATGGTTCGAGCACTTGAAGTGCTTTATTCACTTGGGGTCCTGGATGACGATGCCAAACTTACTTCACCAACTGGATTTCAAGTTGCTGAGTTTCCATTGGATCCCATGATCTCAAAGATGATCTTATCATCTGGCGAATTGGGATGTTCAGAAGAGATTATTACCATTGCAGCCGTTCTCTCTGTTCAATCTATCTGGGCTTCTGGTTGGGGATCACAAAAGGAACTTGATGAAGCCAAGTTGAATTTTGCTGCAGCCGAGGGTGACCATGTGAGTTTCCTAAATGTCTACAAAGCATTTCTTCAGTCTGGTAAATCTTCACAATGGTGTCATAAGAACTTTATAAACTACCAAGCAATGAAAAAGGTTCTTGAAATAAGGGAACAACTCCGAAGAACAGCTCGAAGACTAGGCATTGACTTGAAATCTTGTGAAAGAGATACAGAGGTAGTGAGAAAGGCCATTACTTATGGGTTTTTTGCTAATGCGTGTGTTTTGGAAGTGTCAAGTCATGATGGTAAATATAAAACTATCAGAGGTTCTCAAGAAGTTTATATCCACCCATCATCTGTGCTATTCAGAGTTAATCCCAAGTGGGTGGTTTACCATTCGCTCGTCTCAACTGAAAAGCAATATATGCGAAATGTCATTTCGATAGATCCTTCTTGGCTCACAGAGGCAGCTCCCCATTTTTATCAAAAGCAGCGAACCAATCCTATGCTTCACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005681 GO:0005737 GO:0005829 GO:0005911 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009506 GO:0009987 GO:0010467 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0030054 GO:0032991 GO:0034641 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0055044 GO:0070035 GO:0071704 GO:0090304 GO:0097159 GO:0140098 GO:1901360 GO:1901363 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA_22 HA2 Helicase_C OB_NTP_bind

Protein Analysis

732

Amino Acids

81.53

Weight (kDa)

8.74

Isoelectric Point (pI)

47.06

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AAA_22	PF13401	97 - 225	6.2e-07	AAA domain
DEAD	PF00270	98 - 243	4.1e-06	DEAD/DEAH box helicase
Helicase_C	PF00271	302 - 430	2.2e-12	Helicase conserved C-terminal domain
WHD_HA2	PF04408	493 - 522	6.2e-06	Helicase associated domain (HA2), winged-helix
HA2_C	PF21010	523 - 581	5.5e-10	Helicase associated domain (HA2), ratchet-like
OB_NTP_bind	PF07717	640 - 719	2.1e-22	Oligonucleotide/oligosaccharide-binding (OB)-fold

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005801)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G18465
fragaria_vesca	FvH4_5g21450 FvH4_5g21450 FvH4_5g21450 FvH4_5g21450 FvH4_5g21450 FvH4_5g21450
malus_domestica	MD05G1305600.v1.1
prunus_persica	Prupe.4G056700_v2.0.a1 Prupe.4G056700_v2.0.a1 Prupe.4G056700_v2.0.a1 Prupe.4G056700_v2.0.a1
pyrus_communis	pycom05g28290
rosa_chinensis	RchiOBHm_Chr2g0158101 RchiOBHm_Chr5g0009991
rosa_laevigata	RLG00000031717
rosa_multiflora	Rmu_sc0001648.1_g000001 Rmu_sc0002275.1_g000005
rosa_roxburghii	Rroxscaffold_1G00066170
rosa_rugosa	Rorug04G0448300 Rorug04G0448400 Rorug04G0448500
rosa_samantha	Rh5AG079200 Rh5BG074000 Rh5CG086600 Rh5DG074700
rosa_wichuraiana	Rw5G007330 Rw7G028410

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1811
Acc36I	ACCTGC	1 cut(s)	811
AccB1I	GGYRCC	1 cut(s)	1237
AccB7I	CCANNNNNTGG	1 cut(s)	1075
AccI	GTMKAC	1 cut(s)	1755
AccII	CGCG	2 cut(s)	294, 439
AccIII	TCCGGA	1 cut(s)	203
AciI	CCGC	7 cut(s)	143, 177, 262, 327, 439, 763, 1195
AclWI	GGATC	7 cut(s)	569, 661, 1390, 1562, 1575, 1687, 2120
AcoI	YGGCCR	2 cut(s)	382, 1442
AcsI	RAATTY	2 cut(s)	843, 1711
AcuI	CTGAAG	3 cut(s)	468, 1482, 1754
AcvI	CACGTG	1 cut(s)	1061
AcyI	GRCGYC	2 cut(s)	180, 760
AdeI	CACNNNGTG	1 cut(s)	1064
AfaI	GTAC	5 cut(s)	260, 353, 400, 514, 840
AfiI	CCNNNNNNNGG	2 cut(s)	769, 1075
AgeI	ACCGGT	2 cut(s)	247, 1271
AjnI	CCWGG	5 cut(s)	136, 915, 1068, 1294, 1506
AleI	CACNNNNGTG	1 cut(s)	1792
AloI	GAACNNNNNNTCC	2 cut(s)	1064, 1096
Alw21I	GWGCWC	1 cut(s)	1480
Alw26I	GTCTC	6 cut(s)	127, 281, 659, 895, 1130, 2089
AlwI	GGATC	7 cut(s)	569, 661, 1390, 1562, 1575, 1687, 2120
AlwNI	CAGNNNCTG	2 cut(s)	355, 1075
Aor13HI	TCCGGA	1 cut(s)	203
AoxI	GGCC	6 cut(s)	382, 680, 747, 1292, 1442, 1926
ApoI	RAATTY	2 cut(s)	843, 1711
AsiGI	ACCGGT	2 cut(s)	247, 1271
AspLEI	GCGC	4 cut(s)	63, 296, 439, 693
AspS9I	GGNCC	4 cut(s)	43, 788, 1269, 1504
AsuC2I	CCSGG	1 cut(s)	47
AsuHPI	GGTGA	4 cut(s)	472, 1076, 1524, 1742
AvaII	GGWCC	4 cut(s)	43, 788, 1269, 1504
BaeGI	GKGCMC	1 cut(s)	8
BaeI	ACNNNNGTAYC	2 cut(s)	1899, 1932
BalI	TGGCCA	1 cut(s)	1444
BamHI	GGATCC	1 cut(s)	1567
BanI	GGYRCC	1 cut(s)	1237
BbrPI	CACGTG	1 cut(s)	1061
BbsI	GAAGAC	2 cut(s)	1338, 1879
Bbv12I	GWGCWC	1 cut(s)	1480
BccI	CCATC	6 cut(s)	539, 562, 1024, 1462, 1976, 2038
BceAI	ACGGC	2 cut(s)	369, 1625
BcgI	CGANNNNNNTGC	2 cut(s)	1437, 1471
BciT130I	CCWGG	5 cut(s)	138, 917, 1070, 1296, 1508
BcnI	CCSGG	1 cut(s)	47
BcoDI	GTCTC	6 cut(s)	127, 281, 659, 895, 1130, 2089
BfaI	CTAG	5 cut(s)	9, 1095, 1260, 1877, 2194
BfmI	CTRYAG	3 cut(s)	804, 885, 1719
BfuAI	ACCTGC	1 cut(s)	811
Bme1390I	CCNGG	6 cut(s)	47, 138, 917, 1070, 1296, 1508
Bme18I	GGWCC	4 cut(s)	43, 788, 1269, 1504
BmgT120I	GGNCC	4 cut(s)	43, 788, 1269, 1504
BmiI	GGNNCC	7 cut(s)	44, 801, 861, 921, 1239, 1505, 1569
BmrFI	CCNGG	6 cut(s)	47, 138, 917, 1070, 1296, 1508
BmsI	GCATC	5 cut(s)	493, 958, 1262, 1457, 1507
BpiI	GAAGAC	2 cut(s)	1338, 1879
BpmI	CTGGAG	2 cut(s)	151, 245
Bpu10I	CCTNAGC	1 cut(s)	684
BpuEI	CTTGAG	1 cut(s)	1995
BpuMI	CCSGG	1 cut(s)	47
BsaAI	YACGTR	2 cut(s)	853, 1061
BsaHI	GRCGYC	2 cut(s)	180, 760
BsaI	GGTCTC	2 cut(s)	127, 659
BsaJI	CCNNGG	4 cut(s)	137, 1248, 1295, 1725
BsaWI	WCCGGW	4 cut(s)	203, 247, 769, 1271
BsaXI	ACNNNNNCTCC	4 cut(s)	462, 492, 1064, 1094
Bsc4I	CCNNNNNNNGG	2 cut(s)	769, 1075
Bse118I	RCCGGY	4 cut(s)	247, 320, 678, 1271
Bse1I	ACTGG	3 cut(s)	955, 1399, 1543
Bse3DI	GCAATG	3 cut(s)	1473, 1632, 1830
BseAI	TCCGGA	1 cut(s)	203
BseBI	CCWGG	5 cut(s)	138, 917, 1070, 1296, 1508
BseDI	CCNNGG	4 cut(s)	137, 1248, 1295, 1725
BseGI	GGATG	3 cut(s)	51, 1516, 1616
BseLI	CCNNNNNNNGG	2 cut(s)	769, 1075
BseMI	GCAATG	3 cut(s)	1473, 1632, 1830
BseMII	CTCAG	7 cut(s)	353, 362, 416, 571, 675, 1341, 1545
BseNI	ACTGG	3 cut(s)	955, 1399, 1543
BseRI	GAGGAG	4 cut(s)	149, 190, 222, 872
BseSI	GKGCMC	1 cut(s)	8
BseYI	CCCAGC	1 cut(s)	369
Bsh1236I	CGCG	2 cut(s)	294, 439
BshFI	GGCC	6 cut(s)	384, 682, 749, 1294, 1444, 1928
BshNI	GGYRCC	1 cut(s)	1237
BshTI	ACCGGT	2 cut(s)	247, 1271
BsiHKAI	GWGCWC	1 cut(s)	1480
BsiSI	CCGG	7 cut(s)	46, 204, 248, 321, 679, 770, 1272
BslFI	GGGAC	1 cut(s)	1065
BslI	CCNNNNNNNGG	2 cut(s)	769, 1075
BsmAI	GTCTC	6 cut(s)	127, 281, 659, 895, 1130, 2089
BsmBI	CGTCTC	1 cut(s)	2089
BsmFI	GGGAC	1 cut(s)	1065
BsnI	GGCC	6 cut(s)	384, 682, 749, 1294, 1444, 1928
Bso31I	GGTCTC	2 cut(s)	127, 659
Bsp1286I	GDGCHC	2 cut(s)	8, 1480
Bsp13I	TCCGGA	1 cut(s)	203
Bsp1407I	TGTACA	1 cut(s)	838
Bsp143I	GATC	9 cut(s)	574, 666, 1373, 1395, 1567, 1575, 1587, 1679, 2125
BspACI	CCGC	7 cut(s)	143, 177, 262, 327, 439, 763, 1195
BspANI	GGCC	6 cut(s)	384, 682, 749, 1294, 1444, 1928
BspCNI	CTCAG	7 cut(s)	352, 361, 415, 570, 676, 1342, 1546
BspEI	TCCGGA	1 cut(s)	203
BspFNI	CGCG	2 cut(s)	294, 439
BspHI	TCATGA	2 cut(s)	619, 1978
BspLI	GGNNCC	7 cut(s)	44, 801, 861, 921, 1239, 1505, 1569
BspMAI	CTGCAG	3 cut(s)	808, 889, 1723
BspMI	ACCTGC	1 cut(s)	811
BspPI	GGATC	7 cut(s)	569, 661, 1390, 1562, 1575, 1687, 2120
BspQI	GCTCTTC	1 cut(s)	774
BspT107I	GGYRCC	1 cut(s)	1237
BspTNI	GGTCTC	2 cut(s)	127, 659
BsrDI	GCAATG	3 cut(s)	1473, 1632, 1830
BsrFI	RCCGGY	4 cut(s)	247, 320, 678, 1271
BsrGI	TGTACA	1 cut(s)	838
BsrI	ACTGG	3 cut(s)	955, 1399, 1543
BssAI	RCCGGY	4 cut(s)	247, 320, 678, 1271
BssECI	CCNNGG	4 cut(s)	137, 1248, 1295, 1725
BssMI	GATC	9 cut(s)	574, 666, 1373, 1395, 1567, 1575, 1587, 1679, 2125
BssNI	GRCGYC	2 cut(s)	180, 760
BssT1I	CCWWGG	1 cut(s)	1248
Bst2UI	CCWGG	5 cut(s)	138, 917, 1070, 1296, 1508
Bst4CI	ACNGT	9 cut(s)	97, 126, 268, 304, 380, 596, 898, 1007, 1178
Bst6I	CTCTTC	3 cut(s)	774, 1317, 1614
BstACI	GRCGYC	2 cut(s)	180, 760
BstAPI	GCANNNNNTGC	1 cut(s)	2104
BstAUI	TGTACA	1 cut(s)	838
BstBAI	YACGTR	2 cut(s)	853, 1061
BstC8I	GCNNGC	5 cut(s)	367, 680, 751, 1282, 1446
BstDEI	CTNAG	7 cut(s)	339, 348, 402, 557, 684, 1350, 1554
BstEII	GGTNACC	2 cut(s)	1064, 1730
BstF5I	GGATG	3 cut(s)	51, 1516, 1616
BstFNI	CGCG	2 cut(s)	294, 439
BstHHI	GCGC	4 cut(s)	63, 296, 439, 693
BstKTI	GATC	9 cut(s)	577, 669, 1376, 1398, 1570, 1578, 1590, 1682, 2128
BstMAI	GTCTC	6 cut(s)	127, 281, 659, 895, 1130, 2089
BstMBI	GATC	9 cut(s)	574, 666, 1373, 1395, 1567, 1575, 1587, 1679, 2125
BstMWI	GCNNNNNNNGC	7 cut(s)	107, 321, 371, 443, 688, 759, 2104
BstNI	CCWGG	5 cut(s)	138, 917, 1070, 1296, 1508
BstPI	GGTNACC	2 cut(s)	1064, 1730
BstSCI	CCNGG	6 cut(s)	45, 136, 915, 1068, 1294, 1506
BstSFI	CTRYAG	3 cut(s)	804, 885, 1719
BstSLI	GKGCMC	1 cut(s)	8
BstUI	CGCG	2 cut(s)	294, 439
BstV2I	GAAGAC	2 cut(s)	1338, 1879
BstX2I	RGATCY	3 cut(s)	666, 1567, 2125
BstXI	CCANNNNNNTGG	1 cut(s)	2065
BstYI	RGATCY	3 cut(s)	666, 1567, 2125
BsuRI	GGCC	6 cut(s)	384, 682, 749, 1294, 1444, 1928
BtsCI	GGATG	3 cut(s)	51, 1516, 1616
BtsIMutI	CAGTG	2 cut(s)	601, 1183
BveI	ACCTGC	1 cut(s)	811
Cac8I	GCNNGC	5 cut(s)	367, 680, 751, 1282, 1446
CaiI	CAGNNNCTG	2 cut(s)	355, 1075
CciI	TCATGA	2 cut(s)	619, 1978
CfoI	GCGC	4 cut(s)	63, 296, 439, 693
Cfr10I	RCCGGY	4 cut(s)	247, 320, 678, 1271
Cfr13I	GGNCC	4 cut(s)	43, 788, 1269, 1504
CseI	GACGC	2 cut(s)	169, 768
Csp6I	GTAC	5 cut(s)	259, 352, 399, 513, 839
CspAI	ACCGGT	2 cut(s)	247, 1271
CviAII	CATG	6 cut(s)	620, 796, 911, 1573, 1736, 1979
CviQI	GTAC	5 cut(s)	259, 352, 399, 513, 839
DdeI	CTNAG	7 cut(s)	339, 348, 402, 557, 684, 1350, 1554
DpnI	GATC	9 cut(s)	576, 668, 1375, 1397, 1569, 1577, 1589, 1681, 2127
DpnII	GATC	9 cut(s)	574, 666, 1373, 1395, 1567, 1575, 1587, 1679, 2125
DraIII	CACNNNGTG	1 cut(s)	1064
EaeI	YGGCCR	2 cut(s)	382, 1442
Eam1104I	CTCTTC	3 cut(s)	774, 1317, 1614
EarI	CTCTTC	3 cut(s)	774, 1317, 1614
EciI	GGCGGA	1 cut(s)	158
Eco130I	CCWWGG	1 cut(s)	1248
Eco31I	GGTCTC	2 cut(s)	127, 659
Eco32I	GATATC	1 cut(s)	1212
Eco47I	GGWCC	4 cut(s)	43, 788, 1269, 1504
Eco57I	CTGAAG	3 cut(s)	468, 1482, 1754
Eco72I	CACGTG	1 cut(s)	1061
Eco91I	GGTNACC	2 cut(s)	1064, 1730
EcoO109I	RGGNCCY	1 cut(s)	1504
EcoO65I	GGTNACC	2 cut(s)	1064, 1730
EcoRII	CCWGG	5 cut(s)	136, 915, 1068, 1294, 1506
EcoRV	GATATC	1 cut(s)	1212
EcoT14I	CCWWGG	1 cut(s)	1248
ErhI	CCWWGG	1 cut(s)	1248
Esp3I	CGTCTC	1 cut(s)	2089
FaeI	CATG	6 cut(s)	623, 799, 914, 1576, 1739, 1982
FalI	AAGNNNNNCTT	4 cut(s)	1574, 1606, 1752, 1784
FaqI	GGGAC	1 cut(s)	1065
FatI	CATG	6 cut(s)	619, 795, 910, 1572, 1735, 1978
FauI	CCCGC	1 cut(s)	432
FblI	GTMKAC	1 cut(s)	1755
FokI	GGATG	3 cut(s)	38, 1523, 1623
FspBI	CTAG	5 cut(s)	9, 1095, 1260, 1877, 2194
GlaI	GCGC	4 cut(s)	62, 295, 438, 692
GsaI	CCCAGC	1 cut(s)	373
GsuI	CTGGAG	2 cut(s)	151, 245
HaeIII	GGCC	6 cut(s)	384, 682, 749, 1294, 1444, 1928
HapII	CCGG	7 cut(s)	46, 204, 248, 321, 679, 770, 1272
HgaI	GACGC	2 cut(s)	169, 768
HhaI	GCGC	4 cut(s)	63, 296, 439, 693
Hin1I	GRCGYC	2 cut(s)	180, 760
Hin1II	CATG	6 cut(s)	623, 799, 914, 1576, 1739, 1982
Hin6I	GCGC	4 cut(s)	61, 294, 437, 691
HinP1I	GCGC	4 cut(s)	61, 294, 437, 691
HincII	GTYRAC	1 cut(s)	1174
HindII	GTYRAC	1 cut(s)	1174
HindIII	AAGCTT	1 cut(s)	464
HinfI	GANTC	4 cut(s)	220, 289, 343, 1357
HpaII	CCGG	7 cut(s)	46, 204, 248, 321, 679, 770, 1272
HphI	GGTGA	4 cut(s)	472, 1076, 1524, 1742
Hpy166II	GTNNAC	3 cut(s)	1174, 1756, 2071
Hpy188I	TCNGA	8 cut(s)	342, 1216, 1351, 1462, 1618, 1859, 2003, 2048
Hpy8I	GTNNAC	3 cut(s)	1174, 1756, 2071
Hpy99I	CGWCG	7 cut(s)	167, 170, 185, 287, 308, 311, 314
HpyAV	CCTTC	4 cut(s)	167, 767, 815, 2139
HpyCH4III	ACNGT	9 cut(s)	97, 126, 268, 304, 380, 596, 898, 1007, 1178
HpyCH4IV	ACGT	2 cut(s)	852, 1060
HpyCH4V	TGCA	5 cut(s)	434, 806, 887, 1637, 1721
HpyF10VI	GCNNNNNNNGC	7 cut(s)	107, 321, 371, 443, 688, 759, 2104
HpyF3I	CTNAG	7 cut(s)	339, 348, 402, 557, 684, 1350, 1554
HpySE526I	ACGT	2 cut(s)	852, 1060
Hsp92I	GRCGYC	2 cut(s)	180, 760
Hsp92II	CATG	6 cut(s)	623, 799, 914, 1576, 1739, 1982
HspAI	GCGC	4 cut(s)	61, 294, 437, 691
Kpn2I	TCCGGA	1 cut(s)	203
KroI	GCCGGC	1 cut(s)	678
KroNI	GCCGGC	1 cut(s)	680
Kzo9I	GATC	9 cut(s)	574, 666, 1373, 1395, 1567, 1575, 1587, 1679, 2125
LguI	GCTCTTC	1 cut(s)	774
LmnI	GCTCC	4 cut(s)	859, 1072, 1090, 2155
LweI	GCATC	5 cut(s)	493, 958, 1262, 1457, 1507
MaeI	CTAG	5 cut(s)	9, 1095, 1260, 1877, 2194
MaeII	ACGT	2 cut(s)	852, 1060
MaeIII	GTNAC	6 cut(s)	120, 520, 552, 1064, 1304, 1730
MalI	GATC	9 cut(s)	576, 668, 1375, 1397, 1569, 1577, 1589, 1681, 2127
MboI	GATC	9 cut(s)	574, 666, 1373, 1395, 1567, 1575, 1587, 1679, 2125
MflI	RGATCY	3 cut(s)	666, 1567, 2125
MhlI	GDGCHC	2 cut(s)	8, 1480
MlsI	TGGCCA	1 cut(s)	1444
MluCI	AATT	5 cut(s)	714, 843, 1438, 1604, 1711
MluNI	TGGCCA	1 cut(s)	1444
MlyI	GAGTC	1 cut(s)	283
MmeI	TCCRAC	2 cut(s)	45, 1003
Mox20I	TGGCCA	1 cut(s)	1444
MroI	TCCGGA	1 cut(s)	203
MroNI	GCCGGC	1 cut(s)	678
MscI	TGGCCA	1 cut(s)	1444
MseI	TTAA	4 cut(s)	834, 1403, 1437, 2052
MslI	CAYNNNNRTG	2 cut(s)	56, 1792
Msp20I	TGGCCA	1 cut(s)	1444
MspA1I	CMGCKG	2 cut(s)	327, 1195
MspI	CCGG	7 cut(s)	46, 204, 248, 321, 679, 770, 1272
MspR9I	CCNGG	6 cut(s)	47, 138, 917, 1070, 1296, 1508
MvaI	CCWGG	5 cut(s)	138, 917, 1070, 1296, 1508
MvnI	CGCG	2 cut(s)	294, 439
MwoI	GCNNNNNNNGC	7 cut(s)	107, 321, 371, 443, 688, 759, 2104
NaeI	GCCGGC	1 cut(s)	680
NciI	CCSGG	1 cut(s)	47
NdeII	GATC	9 cut(s)	574, 666, 1373, 1395, 1567, 1575, 1587, 1679, 2125
NgoMIV	GCCGGC	1 cut(s)	678
NlaIII	CATG	6 cut(s)	623, 799, 914, 1576, 1739, 1982
NlaIV	GGNNCC	7 cut(s)	44, 801, 861, 921, 1239, 1505, 1569
NmeAIII	GCCGAG	3 cut(s)	53, 432, 1750
NmuCI	GTSAC	3 cut(s)	120, 1064, 1730
OliI	CACNNNNGTG	1 cut(s)	1792
PagI	TCATGA	2 cut(s)	619, 1978
PciSI	GCTCTTC	1 cut(s)	774
PcsI	WCGNNNNNNNCGW	1 cut(s)	312
PdiI	GCCGGC	1 cut(s)	680
PfeI	GAWTC	3 cut(s)	220, 343, 1357
PflMI	CCANNNNNTGG	1 cut(s)	1075
PfoI	TCCNGGA	1 cut(s)	1506
PinAI	ACCGGT	2 cut(s)	247, 1271
PleI	GAGTC	1 cut(s)	283
PmaCI	CACGTG	1 cut(s)	1061
PmlI	CACGTG	1 cut(s)	1061
PpsI	GAGTC	1 cut(s)	283
Ppu21I	YACGTR	2 cut(s)	853, 1061
PpuMI	RGGWCCY	1 cut(s)	1504
PsiI	TTATAA	1 cut(s)	1811
Psp5II	RGGWCCY	1 cut(s)	1504
Psp6I	CCWGG	5 cut(s)	136, 915, 1068, 1294, 1506
PspCI	CACGTG	1 cut(s)	1061
PspEI	GGTNACC	2 cut(s)	1064, 1730
PspFI	CCCAGC	1 cut(s)	369
PspGI	CCWGG	5 cut(s)	136, 915, 1068, 1294, 1506
PspN4I	GGNNCC	7 cut(s)	44, 801, 861, 921, 1239, 1505, 1569
PspPI	GGNCC	4 cut(s)	43, 788, 1269, 1504
PspPPI	RGGWCCY	1 cut(s)	1504
PstI	CTGCAG	3 cut(s)	808, 889, 1723
PstNI	CAGNNNCTG	2 cut(s)	355, 1075
PsuI	RGATCY	3 cut(s)	666, 1567, 2125
RsaI	GTAC	5 cut(s)	260, 353, 400, 514, 840
RsaNI	GTAC	5 cut(s)	259, 352, 399, 513, 839
RseI	CAYNNNNRTG	2 cut(s)	56, 1792
SapI	GCTCTTC	1 cut(s)	774
SaqAI	TTAA	4 cut(s)	834, 1403, 1437, 2052
Sau3AI	GATC	9 cut(s)	574, 666, 1373, 1395, 1567, 1575, 1587, 1679, 2125
Sau96I	GGNCC	4 cut(s)	43, 788, 1269, 1504
SchI	GAGTC	1 cut(s)	283
ScrFI	CCNGG	6 cut(s)	47, 138, 917, 1070, 1296, 1508
SduI	GDGCHC	2 cut(s)	8, 1480
SfaNI	GCATC	5 cut(s)	493, 958, 1262, 1457, 1507
SfcI	CTRYAG	3 cut(s)	804, 885, 1719
SinI	GGWCC	4 cut(s)	43, 788, 1269, 1504
SmiMI	CAYNNNNRTG	2 cut(s)	56, 1792
SmlI	CTYRAG	1 cut(s)	2010
SmoI	CTYRAG	1 cut(s)	2010
Sse9I	AATT	5 cut(s)	714, 843, 1438, 1604, 1711
SsiI	CCGC	7 cut(s)	143, 177, 262, 327, 439, 763, 1195
SspMI	CTAG	5 cut(s)	9, 1095, 1260, 1877, 2194
StyD4I	CCNGG	6 cut(s)	45, 136, 915, 1068, 1294, 1506
StyI	CCWWGG	1 cut(s)	1248
TaaI	ACNGT	9 cut(s)	97, 126, 268, 304, 380, 596, 898, 1007, 1178
TaiI	ACGT	2 cut(s)	855, 1063
TaqI	TCGA	5 cut(s)	162, 285, 1474, 1870, 2120
TasI	AATT	5 cut(s)	714, 843, 1438, 1604, 1711
TatI	WGTACW	3 cut(s)	398, 512, 838
TauI	GCSGC	3 cut(s)	180, 330, 765
TfiI	GAWTC	3 cut(s)	220, 343, 1357
Tru1I	TTAA	4 cut(s)	834, 1403, 1437, 2052
Tru9I	TTAA	4 cut(s)	834, 1403, 1437, 2052
TscAI	CASTG	2 cut(s)	601, 1183
TseFI	GTSAC	3 cut(s)	120, 1064, 1730
Tsp45I	GTSAC	3 cut(s)	120, 1064, 1730
TspDTI	ATGAA	5 cut(s)	627, 636, 836, 1713, 1841
TspGWI	ACGGA	3 cut(s)	271, 653, 1004
TspRI	CASTG	2 cut(s)	601, 1183
Van91I	CCANNNNNTGG	1 cut(s)	1075
VpaK11BI	GGWCC	4 cut(s)	43, 788, 1269, 1504
XapI	RAATTY	2 cut(s)	843, 1711
XmiI	GTMKAC	1 cut(s)	1755
XspI	CTAG	5 cut(s)	9, 1095, 1260, 1877, 2194

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.