RNA recognition motif
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g27260 FvH4_1g27361 FvH4_2g36070 FvH4_3g27460 FvH4_5g28560 FvH4_5g29240 |
| rosa_chinensis | RchiOBHm_Chr2g0096731 RchiOBHm_Chr7g0235231 |
| rosa_multiflora | Rmu_co8237525.1_g000001 Rmu_sc0032369.1_g000004 |
| rosa_samantha | Rh3BG364300 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AluBI | AGCT | 3 cut(s) | 28, 70, 153 |
| AluI | AGCT | 3 cut(s) | 28, 70, 153 |
| Alw26I | GTCTC | 1 cut(s) | 4 |
| ApeKI | GCWGC | 1 cut(s) | 28 |
| AsuHPI | GGTGA | 1 cut(s) | 203 |
| BbvI | GCAGC | 1 cut(s) | 15 |
| BceAI | ACGGC | 1 cut(s) | 16 |
| BcoDI | GTCTC | 1 cut(s) | 4 |
| BfaI | CTAG | 2 cut(s) | 51, 162 |
| BisI | GCNGC | 1 cut(s) | 29 |
| BlsI | GCNGC | 1 cut(s) | 30 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 59, 91 |
| BsaWI | WCCGGW | 1 cut(s) | 126 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 17, 47, 79, 106, 109, 136 |
| BseGI | GGATG | 1 cut(s) | 139 |
| BseMII | CTCAG | 1 cut(s) | 72 |
| BseRI | GAGGAG | 1 cut(s) | 163 |
| BseXI | GCAGC | 1 cut(s) | 15 |
| BseYI | CCCAGC | 1 cut(s) | 153 |
| BsiSI | CCGG | 1 cut(s) | 127 |
| BslFI | GGGAC | 1 cut(s) | 172 |
| BsmAI | GTCTC | 1 cut(s) | 4 |
| BsmFI | GGGAC | 1 cut(s) | 172 |
| BspCNI | CTCAG | 1 cut(s) | 71 |
| BstDEI | CTNAG | 1 cut(s) | 58 |
| BstF5I | GGATG | 1 cut(s) | 139 |
| BstMAI | GTCTC | 1 cut(s) | 4 |
| BstV1I | GCAGC | 1 cut(s) | 15 |
| BtsCI | GGATG | 1 cut(s) | 139 |
| CviAII | CATG | 1 cut(s) | 176 |
| CviJI | RGCY | 3 cut(s) | 28, 70, 153 |
| CviKI_1 | RGCY | 3 cut(s) | 28, 70, 153 |
| DdeI | CTNAG | 1 cut(s) | 58 |
| FaeI | CATG | 1 cut(s) | 179 |
| FaiI | YATR | 5 cut(s) | 16, 18, 177, 189, 218 |
| FaqI | GGGAC | 1 cut(s) | 172 |
| FatI | CATG | 1 cut(s) | 175 |
| Fnu4HI | GCNGC | 1 cut(s) | 29 |
| FokI | GGATG | 1 cut(s) | 146 |
| Fsp4HI | GCNGC | 1 cut(s) | 29 |
| FspBI | CTAG | 2 cut(s) | 51, 162 |
| GluI | GCNGC | 1 cut(s) | 29 |
| GsaI | CCCAGC | 1 cut(s) | 157 |
| HapII | CCGG | 1 cut(s) | 127 |
| Hin1II | CATG | 1 cut(s) | 179 |
| HinfI | GANTC | 1 cut(s) | 202 |
| HpaII | CCGG | 1 cut(s) | 127 |
| HphI | GGTGA | 1 cut(s) | 203 |
| Hpy188III | TCNNGA | 1 cut(s) | 139 |
| HpyF3I | CTNAG | 1 cut(s) | 58 |
| Hsp92II | CATG | 1 cut(s) | 179 |
| LmnI | GCTCC | 3 cut(s) | 25, 150, 172 |
| LpnPI | CCDG | 2 cut(s) | 139, 140 |
| Lsp1109I | GCAGC | 1 cut(s) | 15 |
| MaeI | CTAG | 2 cut(s) | 51, 162 |
| MluCI | AATT | 1 cut(s) | 222 |
| MlyI | GAGTC | 1 cut(s) | 196 |
| MnlI | CCTC | 7 cut(s) | 77, 98, 104, 108, 135, 141, 158 |
| MseI | TTAA | 1 cut(s) | 198 |
| MspI | CCGG | 1 cut(s) | 127 |
| NlaIII | CATG | 1 cut(s) | 179 |
| PkrI | GCNGC | 1 cut(s) | 30 |
| PleI | GAGTC | 1 cut(s) | 196 |
| PpsI | GAGTC | 1 cut(s) | 196 |
| PspFI | CCCAGC | 1 cut(s) | 153 |
| SaqAI | TTAA | 1 cut(s) | 198 |
| SatI | GCNGC | 1 cut(s) | 29 |
| SchI | GAGTC | 1 cut(s) | 196 |
| SetI | ASST | 5 cut(s) | 30, 52, 72, 155, 169 |
| SgeI | CNNG | 7 cut(s) | 63, 139, 151, 166, 174, 188, 216 |
| Sse9I | AATT | 1 cut(s) | 222 |
| SspMI | CTAG | 2 cut(s) | 51, 162 |
| TasI | AATT | 1 cut(s) | 222 |
| Tru1I | TTAA | 1 cut(s) | 198 |
| Tru9I | TTAA | 1 cut(s) | 198 |
| TseI | GCWGC | 1 cut(s) | 28 |
| TspDTI | ATGAA | 1 cut(s) | 205 |
| XspI | CTAG | 2 cut(s) | 51, 162 |