Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0004725

Physical Location & Seq

Genomic Coordinates Reverse (-)

21842662 .. 21851647

Gene Structure 8986 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g30930.t12

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2571 bp

ATGGGTGATCCTTTTCTCTGCCTCCTCAAAACTCGCTGCTTCACCTTCTCTTCTTCTTCCTCCTTGCTCCCCTCTCACCGTCCTTTTCTGCCCAACAAGCTCAGACCTCGGTCTCCGCATAGATATCCGACGCCTCGGGCTGAAACGACGACGCTTCCGCATTCATCAACATCGCAATTCGATCTCATTTCCACTACCGAGTGCTTGGACGGCAGCGTCGTCTTCCGATTCGGCGACGAGAGCGAGAAAGCTGCTTTTGATGAGGCTAATAAGATTCTGTTTGAGGAGAGCAATGTGGAAGAATCGGGGGTTGAGGCTTCTCCGGCGAGTTCACCCGAGGAGAATGCCGTCCTTGAATTGACCACTGCAGTGTTAGGTGACAACTCCCCTTCCACAGAGTCACAAGATGTATCCACAGAGGGTGAATCACATAGCAGGGATGTTTCAGGAGTATCAGCTCCTAGGAAATTGGAATTCCATACACTTGAACGGTCAGAGGGGTATCCTTCCACAATTTCAGGAGATGAATTGATAGAGGGTGACGCACAAAGAAAATATGACACGCGAGGATCAACTCCTATGCCAGTGGAATTGCATACATCTGAAGGCTCTGAGGGGTATCCTTCTACAAAAGCAGAAGATGAATTAACAGAGGGTAAAGAAGATAGACCAGATGTCATAGGAGCATCAACTCCTACTCCAGGGGAATCGCATGCATCTGAAGGCTCTGAGGGGTATCCTTCTACAAAGTCAGAAGATGAATTAACAGAGGGTACAGGAGATAGAACAGATGTCACAGGAGCATCAACTCCTACGCCCGTGGAATTGCCTACATCTGAAGGAACCAAGGGGTATCCATCTACAAAATCAGAAGATGAAGTTACAGAGGGTAAAGAATATAGAAGAGATGTCACAGGAGCTTCAACTCCTATGCCAGTGGAATTGCATAAAACTGAAGGCTCTAAGGGGTATTCTTCTACAAAGTCCGAAGAGGAATTAACAAGGGACAAAGAAGATAGAACAGATGTCACCGGAGCATCAACTCCTAGGACAGTTAAAGTGCATACTGTTGAAGGCTCTCAAAGATATCCCTCCACGAAGTCAGAGGATGAATTCACAGAGGGGAAAGCCCATCAAAGAGATGTCTCAGGAGCATCAACTGATAGCACAGAGGATATACATACTGTTGAAGCTATTGAGGAGAATGCTTCCATAATTTCAGCGGATGAATTTGCAGATGATAAGACACATAGAAGAGATGCCTCGGGAGAATTAGTTCCTAGAATAGTGGAATTACATTCAGTTGAAGGTGGTAAAAGAAAAGGAATTCCTGTAACAAAATCAGAAGCTCAATCCACAATGGTTGAAGAACAAAGAGATGCTTCAATGGCGTCGACCTCTATAACAGTCGAATCACATACAGTTGAAGGTGCTAAAGGAAAAGGAATTCCTGTAACGAAATCAGAAGATCAATCCACAATGGGTGAAGATCAAAGAGATGCTTCAAGGGCTTCGACCCCTATAACAGTAGAATCACATACAGTTGAAGGTGCTCAGGGGCATGGTTCCATAAAGTTAGAAGATAAATTTGCAGAGGGTAAACTAGTTAGAATAGATGTTTTAGAAGGAGCAACTCCCAGGACAGTGGAATTGCATAGAGTTGAACGTGCTGAGGATACCCCTTCGAAAAAGTCAGAAGATGAATTCACAGAGGATAGAGCACATAGAAGAAATGTTTCAGAAGCATCAACTCCTACAGTTGTTGAGTTGCACATAGTTGAAGGCACGGAAAGGGAGGACATCTCTGCACCATTACTTCTACTATCGACTGGTGCTGCATCATTACCGCATCCCTCAAAGGCATTGACAGGTGGGGAGGATGTTTACTTTGTTGCTTCTGGAAACTGGCTGGGGGTGGCTGATGGAGTTAGTCAATGGTCACTGGAAGGGATTAATCCTGGGGTATATGCCCGTGAACTCATGGAGAACTGTGTAAGGTTTCTATCCAATTGCAAAGGTATACCACTGACTAAACCAGAAGACATCCTTGTTAGAGCTGCTGCCCAAACAAAATCGCCTGGTTCATCTACAGTATTAATTGCTTACTTTGATGGTCAGGCCTTCCATGTGGCAAACATTGGTAATTCTGGATTTATTATAATCAGAAACGGTGCCGTTTTTAAGAGATCGTCTCCATTGATTCATGGCTTCAATTTCCCGCTACAAATTGTAAGAGGCGTTGATCCCTCAGAACTAATGGAGAGATACAGTATAGATTTGGATGAGGGAGATGTTATTGTCACTGCAACGGATGGCCTTTTTGACAACTTGTATGAGCAAGAAATCACTTCAATCGTAACAAAGTCATTCCAAAAGAGAATGAAACTACAGGACATAGCTAAGTTTTTGGCCACTAGTGCACAAGAGGTCGGGCAGTCTACTTCTAGAAGAAGCCCCTTCGCAGATGCAGTCGAGGCATATGGATATGTGGGATATACTGGTGGCAAGCTTGATGATGTGACTGTTATAGTGTCGCATGTACATAAGAAATGCAGCTGTTACTCACTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0009507 GO:0009536 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PP2C SpoIIE

Protein Analysis

857

Amino Acids

92.64

Weight (kDa)

4.82

Isoelectric Point (pI)

45.0

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004725)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G33500
fragaria_vesca	FvH4_5g30930 FvH4_5g30930 FvH4_5g30930 FvH4_5g30930 FvH4_5g30930 FvH4_5g30930 FvH4_5g30930 FvH4_5g30930 FvH4_5g30930 FvH4_5g30930 FvH4_5g30930 FvH4_5g30930
malus_domestica	MD08G1221000.v1.1 MD15G1411700.v1.1
prunus_persica	Prupe.1G557900_v2.0.a1
pyrus_communis	pycom08g19170 pycom15g36650
rosa_chinensis	RchiOBHm_Chr7g0226241
rosa_laevigata	RLG00000001755
rosa_multiflora	Rmu_sc0002055.1_g000001 Rmu_sc0013267.1_g000003
rosa_roxburghii	Rroxscaffold_3G00233100
rosa_rugosa	Rorug07G0235800 Rorug07G0235900
rosa_samantha	Rh7AG382800 Rh7BG370000 Rh7CG402300 Rh7DG381200
rosa_wichuraiana	Rw0G018620 Rw0G021000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2159
AasI	GACNNNNNNGTC	1 cut(s)	215
AccB1I	GGYRCC	1 cut(s)	2171
AccI	GTMKAC	3 cut(s)	1394, 2020, 2438
AccII	CGCG	1 cut(s)	565
AciI	CCGC	5 cut(s)	116, 158, 1223, 1847, 2219
AclWI	GGATC	3 cut(s)	2, 577, 2237
AcoI	YGGCCR	1 cut(s)	2409
AcsI	RAATTY	7 cut(s)	473, 1112, 1229, 1326, 1446, 1586, 1703
AcuI	CTGAAG	4 cut(s)	624, 741, 858, 975
AcyI	GRCGYC	2 cut(s)	131, 1391
AfaI	GTAC	2 cut(s)	775, 2541
AfiI	CCNNNNNNNGG	1 cut(s)	701
AhdI	GACNNNNNGTC	1 cut(s)	674
AhlI	ACTAGT	2 cut(s)	1603, 2414
AjnI	CCWGG	4 cut(s)	700, 1637, 1957, 2077
AleI	CACNNNNGTG	1 cut(s)	368
AloI	GAACNNNNNNTCC	2 cut(s)	1260, 1292
Alw21I	GWGCWC	3 cut(s)	1555, 1723, 2422
Alw26I	GTCTC	3 cut(s)	117, 1150, 2196
Alw44I	GTGCAC	1 cut(s)	2418
AlwI	GGATC	3 cut(s)	2, 577, 2237
Ama87I	CYCGRG	3 cut(s)	135, 335, 1264
AoxI	GGCC	3 cut(s)	2118, 2314, 2409
ApaLI	GTGCAC	1 cut(s)	2418
ApeKI	GCWGC	7 cut(s)	36, 213, 251, 1835, 2057, 2060, 2553
ApoI	RAATTY	7 cut(s)	473, 1112, 1229, 1326, 1446, 1586, 1703
AseI	ATTAAT	2 cut(s)	1953, 2096
Asp700I	GAANNNNTTC	2 cut(s)	1275, 1735
AspA2I	CCTAGG	2 cut(s)	461, 1046
AsuHPI	GGTGA	9 cut(s)	17, 34, 68, 324, 389, 434, 551, 1021, 1496
AsuII	TTCGAA	1 cut(s)	1685
AvaI	CYCGRG	3 cut(s)	135, 335, 1264
AvrII	CCTAGG	2 cut(s)	461, 1046
BaeGI	GKGCMC	1 cut(s)	2422
BalI	TGGCCA	1 cut(s)	2411
BanI	GGYRCC	1 cut(s)	2171
BbsI	GAAGAC	2 cut(s)	214, 2046
Bbv12I	GWGCWC	3 cut(s)	1555, 1723, 2422
BbvCI	CCTCAGC	1 cut(s)	1671
BbvI	GCAGC	7 cut(s)	23, 225, 238, 1822, 2044, 2047, 2565
BccI	CCATC	5 cut(s)	865, 1140, 1916, 2105, 2306
BceAI	ACGGC	3 cut(s)	226, 332, 2159
BcgI	CGANNNNNNTGC	4 cut(s)	233, 267, 326, 360
BciT130I	CCWGG	4 cut(s)	702, 1639, 1959, 2079
BciVI	GTATCC	6 cut(s)	421, 513, 630, 747, 864, 1669
BcoDI	GTCTC	3 cut(s)	117, 1150, 2196
BcuI	ACTAGT	2 cut(s)	1603, 2414
BfaI	CTAG	6 cut(s)	462, 1047, 1281, 1604, 2415, 2445
BfmI	CTRYAG	4 cut(s)	366, 1755, 2088, 2387
BfuI	GTATCC	6 cut(s)	421, 513, 630, 747, 864, 1669
BisI	GCNGC	7 cut(s)	37, 214, 252, 1836, 2058, 2061, 2554
BlnI	CCTAGG	2 cut(s)	461, 1046
BlsI	GCNGC	7 cut(s)	38, 215, 253, 1837, 2059, 2062, 2555
Bme1390I	CCNGG	4 cut(s)	702, 1639, 1959, 2079
BmeRI	GACNNNNNGTC	1 cut(s)	674
BmeT110I	CYCGRG	3 cut(s)	135, 335, 1264
BmiI	GGNNCC	3 cut(s)	844, 1567, 2173
BmrFI	CCNGG	4 cut(s)	702, 1639, 1959, 2079
BoxI	GACNNNNGTC	1 cut(s)	109
BpiI	GAAGAC	2 cut(s)	214, 2046
BplI	GAGNNNNNCTC	4 cut(s)	1787, 1819, 2176, 2208
BpmI	CTGGAG	1 cut(s)	684
Bpu10I	CCTNAGC	2 cut(s)	1554, 1671
Bpu14I	TTCGAA	1 cut(s)	1685
BsaHI	GRCGYC	2 cut(s)	131, 1391
BsaI	GGTCTC	1 cut(s)	117
BsaWI	WCCGGW	1 cut(s)	1031
BsaXI	ACNNNNNCTCC	4 cut(s)	682, 712, 1260, 1290
Bsc4I	CCNNNNNNNGG	1 cut(s)	701
Bse1I	ACTGG	6 cut(s)	584, 935, 1834, 1910, 1947, 2503
Bse3DI	GCAATG	1 cut(s)	298
BseBI	CCWGG	4 cut(s)	702, 1639, 1959, 2079
BseGI	GGATG	8 cut(s)	445, 1114, 1231, 1849, 1885, 2043, 2287, 2317
BseLI	CCNNNNNNNGG	1 cut(s)	701
BseMI	GCAATG	1 cut(s)	298
BseMII	CTCAG	7 cut(s)	115, 603, 720, 1161, 1568, 1662, 2262
BseNI	ACTGG	6 cut(s)	584, 935, 1834, 1910, 1947, 2503
BseRI	GAGGAG	4 cut(s)	14, 299, 353, 1214
BseSI	GKGCMC	1 cut(s)	2422
BseXI	GCAGC	7 cut(s)	23, 225, 238, 1822, 2044, 2047, 2565
BseYI	CCCAGC	1 cut(s)	1909
BsgI	GTGCAG	1 cut(s)	1791
Bsh1236I	CGCG	1 cut(s)	565
BshFI	GGCC	3 cut(s)	2120, 2316, 2411
BshNI	GGYRCC	1 cut(s)	2171
BsiHKAI	GWGCWC	3 cut(s)	1555, 1723, 2422
BsiHKCI	CYCGRG	3 cut(s)	135, 335, 1264
BsiSI	CCGG	2 cut(s)	323, 1032
BslFI	GGGAC	1 cut(s)	1019
BslI	CCNNNNNNNGG	1 cut(s)	701
BsmAI	GTCTC	3 cut(s)	117, 1150, 2196
BsmBI	CGTCTC	1 cut(s)	2196
BsmFI	GGGAC	1 cut(s)	1019
BsmI	GAATGC	3 cut(s)	160, 349, 1210
BsnI	GGCC	3 cut(s)	2120, 2316, 2411
Bso31I	GGTCTC	1 cut(s)	117
BsoBI	CYCGRG	3 cut(s)	135, 335, 1264
Bsp119I	TTCGAA	1 cut(s)	1685
Bsp1286I	GDGCHC	3 cut(s)	1555, 1723, 2422
Bsp1407I	TGTACA	1 cut(s)	2539
Bsp143I	GATC	7 cut(s)	7, 181, 569, 1468, 1489, 2186, 2242
BspACI	CCGC	5 cut(s)	116, 158, 1223, 1847, 2219
BspANI	GGCC	3 cut(s)	2120, 2316, 2411
BspCNI	CTCAG	7 cut(s)	114, 604, 721, 1160, 1567, 1663, 2261
BspFNI	CGCG	1 cut(s)	565
BspLI	GGNNCC	3 cut(s)	844, 1567, 2173
BspMAI	CTGCAG	1 cut(s)	370
BspPI	GGATC	3 cut(s)	2, 577, 2237
BspT104I	TTCGAA	1 cut(s)	1685
BspT107I	GGYRCC	1 cut(s)	2171
BspTNI	GGTCTC	1 cut(s)	117
BsrDI	GCAATG	1 cut(s)	298
BsrGI	TGTACA	1 cut(s)	2539
BsrI	ACTGG	6 cut(s)	584, 935, 1834, 1910, 1947, 2503
BssMI	GATC	7 cut(s)	7, 181, 569, 1468, 1489, 2186, 2242
BssNAI	GTATAC	1 cut(s)	2021
BssNI	GRCGYC	2 cut(s)	131, 1391
BssT1I	CCWWGG	3 cut(s)	461, 846, 1046
Bst1107I	GTATAC	1 cut(s)	2021
Bst2UI	CCWGG	4 cut(s)	702, 1639, 1959, 2079
Bst6I	CTCTTC	4 cut(s)	55, 898, 984, 1249
BstACI	GRCGYC	2 cut(s)	131, 1391
BstAUI	TGTACA	1 cut(s)	2539
BstBI	TTCGAA	1 cut(s)	1685
BstC8I	GCNNGC	2 cut(s)	714, 2507
BstDEI	CTNAG	9 cut(s)	101, 612, 729, 963, 1147, 1554, 1671, 2248, 2400
BstDSI	CCRYGG	1 cut(s)	819
BstENI	CCTNNNNNAGG	1 cut(s)	699
BstF5I	GGATG	8 cut(s)	445, 1114, 1231, 1849, 1885, 2043, 2287, 2317
BstFNI	CGCG	1 cut(s)	565
BstKTI	GATC	7 cut(s)	10, 184, 572, 1471, 1492, 2189, 2245
BstMAI	GTCTC	3 cut(s)	117, 1150, 2196
BstMBI	GATC	7 cut(s)	7, 181, 569, 1468, 1489, 2186, 2242
BstMWI	GCNNNNNNNGC	8 cut(s)	97, 210, 240, 323, 1388, 1508, 2417, 2474
BstNI	CCWGG	4 cut(s)	702, 1639, 1959, 2079
BstNSI	RCATGY	2 cut(s)	716, 2540
BstPAI	GACNNNNGTC	1 cut(s)	109
BstSCI	CCNGG	4 cut(s)	700, 1637, 1957, 2077
BstSFI	CTRYAG	4 cut(s)	366, 1755, 2088, 2387
BstSLI	GKGCMC	1 cut(s)	2422
BstUI	CGCG	1 cut(s)	565
BstV1I	GCAGC	7 cut(s)	23, 225, 238, 1822, 2044, 2047, 2565
BstV2I	GAAGAC	2 cut(s)	214, 2046
BstXI	CCANNNNNNTGG	1 cut(s)	1645
BstZ17I	GTATAC	1 cut(s)	2021
BsuI	GTATCC	6 cut(s)	421, 513, 630, 747, 864, 1669
BsuRI	GGCC	3 cut(s)	2120, 2316, 2411
BtgI	CCRYGG	1 cut(s)	819
BtgZI	GCGATG	1 cut(s)	156
BtsCI	GGATG	8 cut(s)	445, 1114, 1231, 1849, 1885, 2043, 2287, 2317
BtsI	GCAGTG	3 cut(s)	363, 375, 2301
BtsIMutI	CAGTG	9 cut(s)	363, 375, 591, 942, 1650, 1940, 2024, 2301, 2564
Cac8I	GCNNGC	2 cut(s)	714, 2507
CseI	GACGC	5 cut(s)	139, 160, 205, 551, 1380
Csp6I	GTAC	2 cut(s)	774, 2540
CspCI	CAANNNNNGTGG	2 cut(s)	1345, 1380
CviAII	CATG	6 cut(s)	713, 1562, 1981, 2126, 2204, 2537
CviQI	GTAC	2 cut(s)	774, 2540
DdeI	CTNAG	9 cut(s)	101, 612, 729, 963, 1147, 1554, 1671, 2248, 2400
DpnI	GATC	7 cut(s)	9, 183, 571, 1470, 1491, 2188, 2244
DpnII	GATC	7 cut(s)	7, 181, 569, 1468, 1489, 2186, 2242
DrdI	GACNNNNNNGTC	1 cut(s)	215
DriI	GACNNNNNGTC	1 cut(s)	674
DseDI	GACNNNNNNGTC	1 cut(s)	215
EaeI	YGGCCR	1 cut(s)	2409
Eam1104I	CTCTTC	4 cut(s)	55, 898, 984, 1249
Eam1105I	GACNNNNNGTC	1 cut(s)	674
EarI	CTCTTC	4 cut(s)	55, 898, 984, 1249
Eco130I	CCWWGG	3 cut(s)	461, 846, 1046
Eco147I	AGGCCT	1 cut(s)	2120
Eco31I	GGTCTC	1 cut(s)	117
Eco32I	GATATC	2 cut(s)	125, 1088
Eco57I	CTGAAG	4 cut(s)	624, 741, 858, 975
Eco88I	CYCGRG	3 cut(s)	135, 335, 1264
EcoNI	CCTNNNNNAGG	1 cut(s)	699
EcoRI	GAATTC	5 cut(s)	473, 1112, 1326, 1446, 1703
EcoRII	CCWGG	4 cut(s)	700, 1637, 1957, 2077
EcoRV	GATATC	2 cut(s)	125, 1088
EcoT14I	CCWWGG	3 cut(s)	461, 846, 1046
EcoT22I	ATGCAT	1 cut(s)	718
ErhI	CCWWGG	3 cut(s)	461, 846, 1046
Esp3I	CGTCTC	1 cut(s)	2196
FaeI	CATG	6 cut(s)	716, 1565, 1984, 2129, 2207, 2540
FalI	AAGNNNNNCTT	6 cut(s)	1366, 1398, 1486, 1518, 2031, 2063
FaqI	GGGAC	1 cut(s)	1019
FatI	CATG	6 cut(s)	712, 1561, 1980, 2125, 2203, 2536
FauI	CCCGC	1 cut(s)	2226
FauNDI	CATATG	1 cut(s)	2479
FblI	GTMKAC	3 cut(s)	1394, 2020, 2438
Fnu4HI	GCNGC	7 cut(s)	37, 214, 252, 1836, 2058, 2061, 2554
FokI	GGATG	8 cut(s)	452, 1121, 1238, 1836, 1892, 2030, 2294, 2324
Fsp4HI	GCNGC	7 cut(s)	37, 214, 252, 1836, 2058, 2061, 2554
FspBI	CTAG	6 cut(s)	462, 1047, 1281, 1604, 2415, 2445
GluI	GCNGC	7 cut(s)	37, 214, 252, 1836, 2058, 2061, 2554
GsaI	CCCAGC	1 cut(s)	1913
GsuI	CTGGAG	1 cut(s)	684
HaeIII	GGCC	3 cut(s)	2120, 2316, 2411
HapII	CCGG	2 cut(s)	323, 1032
HgaI	GACGC	5 cut(s)	139, 160, 205, 551, 1380
Hin1I	GRCGYC	2 cut(s)	131, 1391
Hin1II	CATG	6 cut(s)	716, 1565, 1984, 2129, 2207, 2540
HincII	GTYRAC	1 cut(s)	1395
HindII	GTYRAC	1 cut(s)	1395
HindIII	AAGCTT	1 cut(s)	2507
HinfI	GANTC	9 cut(s)	228, 274, 302, 398, 425, 707, 1412, 1532, 2200
HpaII	CCGG	2 cut(s)	323, 1032
HphI	GGTGA	9 cut(s)	17, 34, 68, 324, 389, 434, 551, 1021, 1496
Hpy166II	GTNNAC	8 cut(s)	332, 1395, 1601, 1885, 1976, 2021, 2420, 2439
Hpy188III	TCNNGA	7 cut(s)	447, 519, 1149, 1266, 1899, 2148, 2445
Hpy8I	GTNNAC	8 cut(s)	332, 1395, 1601, 1885, 1976, 2021, 2420, 2439
Hpy99I	CGWCG	6 cut(s)	133, 151, 154, 221, 239, 1396
HpyCH4IV	ACGT	1 cut(s)	1666
HpyF10VI	GCNNNNNNNGC	8 cut(s)	97, 210, 240, 323, 1388, 1508, 2417, 2474
HpyF3I	CTNAG	9 cut(s)	101, 612, 729, 963, 1147, 1554, 1671, 2248, 2400
HpySE526I	ACGT	1 cut(s)	1666
Hsp92I	GRCGYC	2 cut(s)	131, 1391
Hsp92II	CATG	6 cut(s)	716, 1565, 1984, 2129, 2207, 2540
Kzo9I	GATC	7 cut(s)	7, 181, 569, 1468, 1489, 2186, 2242
LmnI	GCTCC	8 cut(s)	72, 463, 683, 800, 917, 1034, 1151, 1628
Lsp1109I	GCAGC	7 cut(s)	23, 225, 238, 1822, 2044, 2047, 2565
MaeI	CTAG	6 cut(s)	462, 1047, 1281, 1604, 2415, 2445
MaeII	ACGT	1 cut(s)	1666
MalI	GATC	7 cut(s)	9, 183, 571, 1470, 1491, 2188, 2244
MboI	GATC	7 cut(s)	7, 181, 569, 1468, 1489, 2186, 2242
MfeI	CAATTG	1 cut(s)	2008
MhlI	GDGCHC	3 cut(s)	1555, 1723, 2422
MlsI	TGGCCA	1 cut(s)	2411
MluNI	TGGCCA	1 cut(s)	2411
MlyI	GAGTC	1 cut(s)	407
MmeI	TCCRAC	1 cut(s)	152
Mox20I	TGGCCA	1 cut(s)	2411
Mph1103I	ATGCAT	1 cut(s)	718
MroXI	GAANNNNTTC	2 cut(s)	1275, 1735
MscI	TGGCCA	1 cut(s)	2411
MseI	TTAA	7 cut(s)	647, 764, 998, 1056, 1953, 2096, 2181
MslI	CAYNNNNRTG	1 cut(s)	368
Msp20I	TGGCCA	1 cut(s)	2411
MspA1I	CMGCKG	2 cut(s)	1223, 2556
MspI	CCGG	2 cut(s)	323, 1032
MspR9I	CCNGG	4 cut(s)	702, 1639, 1959, 2079
MunI	CAATTG	1 cut(s)	2008
Mva1269I	GAATGC	3 cut(s)	160, 349, 1210
MvaI	CCWGG	4 cut(s)	702, 1639, 1959, 2079
MvnI	CGCG	1 cut(s)	565
MwoI	GCNNNNNNNGC	8 cut(s)	97, 210, 240, 323, 1388, 1508, 2417, 2474
NdeI	CATATG	1 cut(s)	2479
NdeII	GATC	7 cut(s)	7, 181, 569, 1468, 1489, 2186, 2242
NlaIII	CATG	6 cut(s)	716, 1565, 1984, 2129, 2207, 2540
NlaIV	GGNNCC	3 cut(s)	844, 1567, 2173
NmuCI	GTSAC	9 cut(s)	377, 399, 539, 793, 910, 1027, 1938, 2299, 2518
NsiI	ATGCAT	1 cut(s)	718
NspI	RCATGY	2 cut(s)	716, 2540
NspV	TTCGAA	1 cut(s)	1685
OliI	CACNNNNGTG	1 cut(s)	368
PaeI	GCATGC	1 cut(s)	716
PceI	AGGCCT	1 cut(s)	2120
PcsI	WCGNNNNNNNCGW	1 cut(s)	216
PctI	GAATGC	3 cut(s)	160, 349, 1210
PdmI	GAANNNNTTC	2 cut(s)	1275, 1735
PfeI	GAWTC	8 cut(s)	228, 274, 302, 425, 707, 1412, 1532, 2200
PkrI	GCNGC	7 cut(s)	38, 215, 253, 1837, 2059, 2062, 2555
PleI	GAGTC	1 cut(s)	406
PpsI	GAGTC	1 cut(s)	406
PshAI	GACNNNNGTC	1 cut(s)	109
PshBI	ATTAAT	2 cut(s)	1953, 2096
PsiI	TTATAA	1 cut(s)	2159
Psp6I	CCWGG	4 cut(s)	700, 1637, 1957, 2077
PspFI	CCCAGC	1 cut(s)	1909
PspGI	CCWGG	4 cut(s)	700, 1637, 1957, 2077
PspN4I	GGNNCC	3 cut(s)	844, 1567, 2173
PstI	CTGCAG	1 cut(s)	370
PvuII	CAGCTG	1 cut(s)	2556
RsaI	GTAC	2 cut(s)	775, 2541
RsaNI	GTAC	2 cut(s)	774, 2540
RseI	CAYNNNNRTG	1 cut(s)	368
SalI	GTCGAC	1 cut(s)	1393
SaqAI	TTAA	7 cut(s)	647, 764, 998, 1056, 1953, 2096, 2181
SatI	GCNGC	7 cut(s)	37, 214, 252, 1836, 2058, 2061, 2554
Sau3AI	GATC	7 cut(s)	7, 181, 569, 1468, 1489, 2186, 2242
SchI	GAGTC	1 cut(s)	407
ScrFI	CCNGG	4 cut(s)	702, 1639, 1959, 2079
SduI	GDGCHC	3 cut(s)	1555, 1723, 2422
SfcI	CTRYAG	4 cut(s)	366, 1755, 2088, 2387
SfuI	TTCGAA	1 cut(s)	1685
SmiMI	CAYNNNNRTG	1 cut(s)	368
SpeI	ACTAGT	2 cut(s)	1603, 2414
SphI	GCATGC	1 cut(s)	716
SseBI	AGGCCT	1 cut(s)	2120
SsiI	CCGC	5 cut(s)	116, 158, 1223, 1847, 2219
SspMI	CTAG	6 cut(s)	462, 1047, 1281, 1604, 2415, 2445
StuI	AGGCCT	1 cut(s)	2120
StyD4I	CCNGG	4 cut(s)	700, 1637, 1957, 2077
StyI	CCWWGG	3 cut(s)	461, 846, 1046
TaiI	ACGT	1 cut(s)	1669
TaqI	TCGA	7 cut(s)	180, 1394, 1410, 1514, 1685, 1826, 2472
TaqII	GACCGA	1 cut(s)	99
TatI	WGTACW	1 cut(s)	2539
TfiI	GAWTC	8 cut(s)	228, 274, 302, 425, 707, 1412, 1532, 2200
Tru1I	TTAA	7 cut(s)	647, 764, 998, 1056, 1953, 2096, 2181
Tru9I	TTAA	7 cut(s)	647, 764, 998, 1056, 1953, 2096, 2181
TscAI	CASTG	9 cut(s)	370, 375, 591, 942, 1650, 1947, 2031, 2308, 2571
TseFI	GTSAC	9 cut(s)	377, 399, 539, 793, 910, 1027, 1938, 2299, 2518
TseI	GCWGC	7 cut(s)	36, 213, 251, 1835, 2057, 2060, 2553
Tsp45I	GTSAC	9 cut(s)	377, 399, 539, 793, 910, 1027, 1938, 2299, 2518
TspGWI	ACGGA	2 cut(s)	1802, 2324
TspRI	CASTG	9 cut(s)	370, 375, 591, 942, 1650, 1947, 2031, 2308, 2571
VneI	GTGCAC	1 cut(s)	2418
VspI	ATTAAT	2 cut(s)	1953, 2096
XagI	CCTNNNNNAGG	1 cut(s)	699
XapI	RAATTY	7 cut(s)	473, 1112, 1229, 1326, 1446, 1586, 1703
XbaI	TCTAGA	1 cut(s)	2444
XceI	RCATGY	2 cut(s)	716, 2540
XmaJI	CCTAGG	2 cut(s)	461, 1046
XmiI	GTMKAC	3 cut(s)	1394, 2020, 2438
XmnI	GAANNNNTTC	2 cut(s)	1275, 1735
XspI	CTAG	6 cut(s)	462, 1047, 1281, 1604, 2415, 2445
Zsp2I	ATGCAT	1 cut(s)	718

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.